Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Forward (+)

8891910 .. 8894503

Gene Structure 2594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG096900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGGTACAACGGTGGAGGATGTGGTGATAGTAGGAGGAGGGATAGCCGGACTGGCGACAGCGGTGGCGCTGAAGAGAGCTGGAATAGAAGCGTTGGTGTTGGAGAGATCGGAAGGGCTTCGAGCCACTGGTGCAGCTTTGACTCTATTCCCAAACGCCTGGATTGCTCTTGATACCTTGGGGGTTTCTCATAAGCTTGCTACTTATACCCCATCTCTCAAGGGATATGTAACTGATCTTGATACTGGAGAAATTCAAGAACTCTCTTTCACCAAAGCCAATGGTGATTCAGCTGGACCGAGATCAGTACACCGGAAAGCCTTGCTCGAGGCTTTGGCAGGTGAATTACCGGTTCATTCGATCCGTTTCTCTTCCAAGATCTCTTCTATAGAAACACAACAACATGAAGGTTCATCCATTGCCATTGTTCACGTGGAAAATGGAACTGTCATTAAAGCAAAGGTTCTCATAGGGTGTGACGGGGTTCACTCAGTGGTGTCACGCTGGTTAGGACTCCGTGAGGCAGTCCTTTCAGGACGATCAGCTGCTCGTGGCTTGGCTGTGTATCCTCAAGGCCATGGACTCGAGCAGAAGGTGCGACAGTATGTAGGATCAGGCAGAAGGGCTGGCTTCGTTCCCCTCACCGACAAAGAGATCTACTGGTTCTTCACTGTCACATCTCCAGCTAAAGGGACCTCCCTAGCGAAAGATCCCGAAGATATACAAAAAGAAGTACTTGAGAATTATGCCAAGGACCTCCCACCTATATTCTTAGATGTTGTGCAGCACACAGATCTTTCGACATTAACATGGGCTCCATTAATGTTTAGATATCCCTGGAACGTAGTATTTGGCAACTTAAGCAAGCAAAACATCACTGTGACCGGCGATGCCATGCACCCCATGACACCTGACCTAGCACAGGGGGGTTGCTCAGCATTAGAAGATGCAGTGATCTTAGGCAGGCACATTGGGACATCCTTTGTACAGAACGGACGTGTACTAGTACCGAACGAGATTAGTCAAGTACTGGGTAAATATGTGGAAGAAAGAAGGTGGCGCGTCGCTTTGTTGATCACAGGGTCATATATAGCAGGATGGGTGCAGCAGGGAGGATCTGGATGGGGTATGAAATTCTTGAGATATTCCATATTTTACAAATTCCTTTTCCTTAAGATGGTTATATACGTAAACTATGACTGTGGGAAACTCGACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

406

Amino Acids

44.16

Weight (kDa)

8.28

Isoelectric Point (pI)

37.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	7 - 326	5.4e-24	FAD binding domain
DAO	PF01266	7 - 54	1.5e-07	FAD dependent oxidoreductase
NAD_binding_8	PF13450	10 - 40	6.2e-06	NAD(P)-binding Rossmann-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	329
Acc36I	ACCTGC	1 cut(s)	329
AccII	CGCG	1 cut(s)	1062
AciI	CCGC	1 cut(s)	62
AclWI	GGATC	4 cut(s)	355, 619, 704, 1123
AcsI	RAATTY	3 cut(s)	252, 1133, 1160
AcuI	CTGAAG	1 cut(s)	92
AcvI	CACGTG	1 cut(s)	433
AdeI	CACNNNGTG	1 cut(s)	493
AfaI	GTAC	7 cut(s)	7, 309, 735, 987, 1002, 1008, 1029
AfiI	CCNNNNNNNGG	3 cut(s)	689, 922, 1177
AflII	CTTAAG	2 cut(s)	859, 1172
AflIII	ACRYGT	1 cut(s)	997
AgeI	ACCGGT	1 cut(s)	349
AgsI	TTSAA	1 cut(s)	257
AhlI	ACTAGT	1 cut(s)	1003
AjiI	CACGTC	1 cut(s)	998
AjnI	CCWGG	2 cut(s)	158, 836
AluBI	AGCT	6 cut(s)	80, 137, 196, 293, 545, 686
AluI	AGCT	6 cut(s)	80, 137, 196, 293, 545, 686
AlwI	GGATC	4 cut(s)	355, 619, 704, 1123
Ama87I	CYCGRG	2 cut(s)	326, 584
AoxI	GGCC	1 cut(s)	574
ApeKI	GCWGC	4 cut(s)	134, 545, 784, 1105
ApoI	RAATTY	3 cut(s)	252, 1133, 1160
AseI	ATTAAT	1 cut(s)	821
AsiGI	ACCGGT	1 cut(s)	349
Asp700I	GAANNNNTTC	1 cut(s)	117
AspLEI	GCGC	2 cut(s)	70, 1062
AspS9I	GGNCC	3 cut(s)	296, 693, 754
AsuHPI	GGTGA	5 cut(s)	37, 262, 296, 353, 634
AvaI	CYCGRG	2 cut(s)	326, 584
AvaII	GGWCC	3 cut(s)	296, 693, 754
BaeI	ACNNNNGTAYC	1 cut(s)	30
BanII	GRGCYC	1 cut(s)	817
BauI	CACGAG	1 cut(s)	549
BbrPI	CACGTG	1 cut(s)	433
BbvI	GCAGC	4 cut(s)	146, 532, 796, 1117
BccI	CCATC	4 cut(s)	220, 1092, 1116, 1171
BciT130I	CCWGG	2 cut(s)	160, 838
BciVI	GTATCC	1 cut(s)	576
BclI	TGATCA	1 cut(s)	1074
BcuI	ACTAGT	1 cut(s)	1003
BfaI	CTAG	4 cut(s)	701, 917, 1004, 1219
BfmI	CTRYAG	1 cut(s)	387
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	2 cut(s)	859, 1172
BfuAI	ACCTGC	1 cut(s)	329
BfuI	GTATCC	1 cut(s)	576
BglI	GCCNNNNNGGC	1 cut(s)	53
BglII	AGATCT	3 cut(s)	378, 654, 793
BisI	GCNGC	4 cut(s)	135, 546, 785, 1106
BlpI	GCTNAGC	1 cut(s)	934
BlsI	GCNGC	4 cut(s)	136, 547, 786, 1107
BmcAI	AGTACT	2 cut(s)	735, 1029
Bme1390I	CCNGG	2 cut(s)	160, 838
Bme18I	GGWCC	3 cut(s)	296, 693, 754
BmeT110I	CYCGRG	2 cut(s)	326, 584
BmgBI	CACGTC	1 cut(s)	998
BmgT120I	GGNCC	3 cut(s)	296, 693, 754
BmiI	GGNNCC	2 cut(s)	694, 816
BmrFI	CCNGG	2 cut(s)	160, 838
BmrI	ACTGGG	1 cut(s)	1040
BmsI	GCATC	2 cut(s)	880, 937
BmuI	ACTGGG	1 cut(s)	1040
BpmI	CTGGAG	2 cut(s)	267, 666
Bpu1102I	GCTNAGC	1 cut(s)	934
BpuEI	CTTGAG	4 cut(s)	203, 555, 758, 1159
BsaAI	YACGTR	2 cut(s)	433, 1189
BsaJI	CCNNGG	4 cut(s)	177, 577, 750, 836
BsaWI	WCCGGW	2 cut(s)	312, 349
BsaXI	ACNNNNNCTCC	2 cut(s)	799, 829
Bsc4I	CCNNNNNNNGG	3 cut(s)	689, 922, 1177
Bse118I	RCCGGY	2 cut(s)	349, 884
Bse1I	ACTGG	5 cut(s)	57, 133, 250, 665, 1035
Bse3DI	GCAATG	1 cut(s)	417
BseBI	CCWGG	2 cut(s)	160, 838
BseDI	CCNNGG	4 cut(s)	177, 577, 750, 836
BseGI	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BseLI	CCNNNNNNNGG	3 cut(s)	689, 922, 1177
BseMI	GCAATG	1 cut(s)	417
BseMII	CTCAG	2 cut(s)	504, 948
BseNI	ACTGG	5 cut(s)	57, 133, 250, 665, 1035
BseRI	GAGGAG	1 cut(s)	51
BseXI	GCAGC	4 cut(s)	146, 532, 796, 1117
BsgI	GTGCAG	3 cut(s)	153, 803, 1124
Bsh1236I	CGCG	1 cut(s)	1062
BshFI	GGCC	1 cut(s)	576
BshTI	ACCGGT	1 cut(s)	349
BsiHKCI	CYCGRG	2 cut(s)	326, 584
BsiSI	CCGG	4 cut(s)	48, 313, 350, 885
BslFI	GGGAC	2 cut(s)	706, 988
BslI	CCNNNNNNNGG	3 cut(s)	689, 922, 1177
BsmFI	GGGAC	2 cut(s)	706, 988
BsnI	GGCC	1 cut(s)	576
BsoBI	CYCGRG	2 cut(s)	326, 584
Bsp1286I	GDGCHC	1 cut(s)	817
Bsp1407I	TGTACA	1 cut(s)	985
Bsp1720I	GCTNAGC	1 cut(s)	934
Bsp19I	CCATGG	1 cut(s)	577
BspACI	CCGC	1 cut(s)	62
BspANI	GGCC	1 cut(s)	576
BspCNI	CTCAG	2 cut(s)	503, 947
BspFNI	CGCG	1 cut(s)	1062
BspLI	GGNNCC	2 cut(s)	694, 816
BspMI	ACCTGC	1 cut(s)	329
BspPI	GGATC	4 cut(s)	355, 619, 704, 1123
BspTI	CTTAAG	2 cut(s)	859, 1172
BsrDI	GCAATG	1 cut(s)	417
BsrFI	RCCGGY	2 cut(s)	349, 884
BsrGI	TGTACA	1 cut(s)	985
BsrI	ACTGG	5 cut(s)	57, 133, 250, 665, 1035
BssAI	RCCGGY	2 cut(s)	349, 884
BssECI	CCNNGG	4 cut(s)	177, 577, 750, 836
BssSI	CACGAG	1 cut(s)	549
BssT1I	CCWWGG	3 cut(s)	177, 577, 750
Bst2BI	CACGAG	1 cut(s)	549
Bst2UI	CCWGG	2 cut(s)	160, 838
Bst4CI	ACNGT	6 cut(s)	13, 448, 603, 673, 880, 1202
Bst6I	CTCTTC	3 cut(s)	68, 376, 388
BstAFI	CTTAAG	2 cut(s)	859, 1172
BstAPI	GCANNNNNTGC	1 cut(s)	595
BstAUI	TGTACA	1 cut(s)	985
BstBAI	YACGTR	2 cut(s)	433, 1189
BstC8I	GCNNGC	4 cut(s)	198, 628, 866, 965
BstDEI	CTNAG	4 cut(s)	490, 772, 934, 958
BstDSI	CCRYGG	1 cut(s)	577
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstF5I	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BstFNI	CGCG	1 cut(s)	1062
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 1062
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 595, 861
BstNI	CCWGG	2 cut(s)	160, 838
BstSCI	CCNGG	2 cut(s)	158, 836
BstSFI	CTRYAG	1 cut(s)	387
BstSNI	TACGTA	1 cut(s)	1189
BstUI	CGCG	1 cut(s)	1062
BstV1I	GCAGC	4 cut(s)	146, 532, 796, 1117
BstX2I	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
BstXI	CCANNNNNNTGG	1 cut(s)	159
BstYI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
BsuI	GTATCC	1 cut(s)	576
BsuRI	GGCC	1 cut(s)	576
BtgI	CCRYGG	1 cut(s)	577
BtgZI	GCGATG	1 cut(s)	903
BtrI	CACGTC	1 cut(s)	998
BtsCI	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	5 cut(s)	126, 498, 669, 876, 957
BveI	ACCTGC	1 cut(s)	329
Cac8I	GCNNGC	4 cut(s)	198, 628, 866, 965
CfoI	GCGC	2 cut(s)	70, 1062
Cfr10I	RCCGGY	2 cut(s)	349, 884
Cfr13I	GGNCC	3 cut(s)	296, 693, 754
CseI	GACGC	1 cut(s)	1051
Csp6I	GTAC	7 cut(s)	6, 308, 734, 986, 1001, 1007, 1028
CspAI	ACCGGT	1 cut(s)	349
CviAII	CATG	5 cut(s)	404, 578, 810, 895, 904
CviQI	GTAC	7 cut(s)	6, 308, 734, 986, 1001, 1007, 1028
DdeI	CTNAG	4 cut(s)	490, 772, 934, 958
DraIII	CACNNNGTG	1 cut(s)	493
Eam1104I	CTCTTC	3 cut(s)	68, 376, 388
EarI	CTCTTC	3 cut(s)	68, 376, 388
Eco105I	TACGTA	1 cut(s)	1189
Eco130I	CCWWGG	3 cut(s)	177, 577, 750
Eco24I	GRGCYC	1 cut(s)	817
Eco32I	GATATC	1 cut(s)	833
Eco47I	GGWCC	3 cut(s)	296, 693, 754
Eco57I	CTGAAG	1 cut(s)	92
Eco72I	CACGTG	1 cut(s)	433
Eco88I	CYCGRG	2 cut(s)	326, 584
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoO109I	RGGNCCY	2 cut(s)	693, 754
EcoRII	CCWGG	2 cut(s)	158, 836
EcoRV	GATATC	1 cut(s)	833
EcoT14I	CCWWGG	3 cut(s)	177, 577, 750
EcoT38I	GRGCYC	1 cut(s)	817
ErhI	CCWWGG	3 cut(s)	177, 577, 750
FaeI	CATG	5 cut(s)	407, 581, 813, 898, 907
FalI	AAGNNNNNCTT	2 cut(s)	720, 752
FaqI	GGGAC	2 cut(s)	706, 988
FatI	CATG	5 cut(s)	403, 577, 809, 894, 903
FbaI	TGATCA	1 cut(s)	1074
Fnu4HI	GCNGC	4 cut(s)	135, 546, 785, 1106
FokI	GGATG	5 cut(s)	32, 400, 964, 1110, 1134
FriOI	GRGCYC	1 cut(s)	817
Fsp4HI	GCNGC	4 cut(s)	135, 546, 785, 1106
FspBI	CTAG	4 cut(s)	701, 917, 1004, 1219
GlaI	GCGC	2 cut(s)	69, 1061
GluI	GCNGC	4 cut(s)	135, 546, 785, 1106
GsuI	CTGGAG	2 cut(s)	267, 666
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	1 cut(s)	576
HapII	CCGG	4 cut(s)	48, 313, 350, 885
HgaI	GACGC	1 cut(s)	1051
HhaI	GCGC	2 cut(s)	70, 1062
Hin1II	CATG	5 cut(s)	407, 581, 813, 898, 907
Hin6I	GCGC	2 cut(s)	68, 1060
HinP1I	GCGC	2 cut(s)	68, 1060
HindIII	AAGCTT	1 cut(s)	194
HinfI	GANTC	4 cut(s)	142, 287, 513, 582
HpaII	CCGG	4 cut(s)	48, 313, 350, 885
HphI	GGTGA	5 cut(s)	37, 262, 296, 353, 634
Hpy166II	GTNNAC	5 cut(s)	310, 430, 487, 1001, 1192
Hpy188I	TCNGA	1 cut(s)	112
Hpy188III	TCNNGA	7 cut(s)	170, 239, 257, 534, 713, 1119, 1138
Hpy8I	GTNNAC	5 cut(s)	310, 430, 487, 1001, 1192
Hpy99I	CGWCG	1 cut(s)	1067
HpyAV	CCTTC	5 cut(s)	107, 401, 586, 615, 1047
HpyCH4III	ACNGT	6 cut(s)	13, 448, 603, 673, 880, 1202
HpyCH4IV	ACGT	4 cut(s)	432, 843, 997, 1188
HpyCH4V	TGCA	5 cut(s)	134, 784, 898, 950, 1105
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 595, 861
HpyF3I	CTNAG	4 cut(s)	490, 772, 934, 958
HpySE526I	ACGT	4 cut(s)	432, 843, 997, 1188
Hsp92II	CATG	5 cut(s)	407, 581, 813, 898, 907
HspAI	GCGC	2 cut(s)	68, 1060
Ksp22I	TGATCA	1 cut(s)	1074
LmnI	GCTCC	1 cut(s)	820
Lsp1109I	GCAGC	4 cut(s)	146, 532, 796, 1117
LweI	GCATC	2 cut(s)	880, 937
MaeI	CTAG	4 cut(s)	701, 917, 1004, 1219
MaeII	ACGT	4 cut(s)	432, 843, 997, 1188
MaeIII	GTNAC	5 cut(s)	229, 476, 498, 673, 880
MboII	GAAGA	7 cut(s)	85, 363, 375, 658, 728, 956, 1058
MflI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
MhlI	GDGCHC	1 cut(s)	817
MluCI	AATT	5 cut(s)	252, 344, 742, 1133, 1160
MlyI	GAGTC	3 cut(s)	136, 507, 576
MmeI	TCCRAC	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	117
MseI	TTAA	5 cut(s)	453, 806, 821, 860, 1173
MslI	CAYNNNNRTG	2 cut(s)	808, 878
MspA1I	CMGCKG	3 cut(s)	62, 293, 545
MspCI	CTTAAG	2 cut(s)	859, 1172
MspI	CCGG	4 cut(s)	48, 313, 350, 885
MspR9I	CCNGG	2 cut(s)	160, 838
MvaI	CCWGG	2 cut(s)	160, 838
MvnI	CGCG	1 cut(s)	1062
MwoI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 595, 861
NcoI	CCATGG	1 cut(s)	577
NlaIII	CATG	5 cut(s)	407, 581, 813, 898, 907
NlaIV	GGNNCC	2 cut(s)	694, 816
NmuCI	GTSAC	4 cut(s)	476, 498, 673, 880
PaeR7I	CTCGAG	2 cut(s)	326, 584
PaqCI	CACCTGC	1 cut(s)	329
PdmI	GAANNNNTTC	1 cut(s)	117
PfeI	GAWTC	1 cut(s)	287
PinAI	ACCGGT	1 cut(s)	349
PkrI	GCNGC	4 cut(s)	136, 547, 786, 1107
PleI	GAGTC	3 cut(s)	136, 507, 576
PmaCI	CACGTG	1 cut(s)	433
PmlI	CACGTG	1 cut(s)	433
PpsI	GAGTC	3 cut(s)	136, 507, 576
Ppu21I	YACGTR	2 cut(s)	433, 1189
PpuMI	RGGWCCY	2 cut(s)	693, 754
PshBI	ATTAAT	1 cut(s)	821
Psp5II	RGGWCCY	2 cut(s)	693, 754
Psp6I	CCWGG	2 cut(s)	158, 836
PspCI	CACGTG	1 cut(s)	433
PspGI	CCWGG	2 cut(s)	158, 836
PspN4I	GGNNCC	2 cut(s)	694, 816
PspPI	GGNCC	3 cut(s)	296, 693, 754
PspPPI	RGGWCCY	2 cut(s)	693, 754
PspXI	VCTCGAGB	2 cut(s)	326, 584
PsuI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
PvuII	CAGCTG	2 cut(s)	293, 545
RsaI	GTAC	7 cut(s)	7, 309, 735, 987, 1002, 1008, 1029
RsaNI	GTAC	7 cut(s)	6, 308, 734, 986, 1001, 1007, 1028
RseI	CAYNNNNRTG	2 cut(s)	808, 878
SaqAI	TTAA	5 cut(s)	453, 806, 821, 860, 1173
SatI	GCNGC	4 cut(s)	135, 546, 785, 1106
Sau96I	GGNCC	3 cut(s)	296, 693, 754
ScaI	AGTACT	2 cut(s)	735, 1029
SchI	GAGTC	3 cut(s)	136, 507, 576
ScrFI	CCNGG	2 cut(s)	160, 838
SduI	GDGCHC	1 cut(s)	817
SfaNI	GCATC	2 cut(s)	880, 937
SfcI	CTRYAG	1 cut(s)	387
Sfr274I	CTCGAG	2 cut(s)	326, 584
SinI	GGWCC	3 cut(s)	296, 693, 754
SlaI	CTCGAG	2 cut(s)	326, 584
SmiMI	CAYNNNNRTG	2 cut(s)	808, 878
SmlI	CTYRAG	8 cut(s)	218, 326, 570, 584, 737, 859, 1138, 1172
SmoI	CTYRAG	8 cut(s)	218, 326, 570, 584, 737, 859, 1138, 1172
SnaBI	TACGTA	1 cut(s)	1189
SpeI	ACTAGT	1 cut(s)	1003
Sse9I	AATT	5 cut(s)	252, 344, 742, 1133, 1160
SsiI	CCGC	1 cut(s)	62
SspMI	CTAG	4 cut(s)	701, 917, 1004, 1219
StyD4I	CCNGG	2 cut(s)	158, 836
StyI	CCWWGG	3 cut(s)	177, 577, 750
TaaI	ACNGT	6 cut(s)	13, 448, 603, 673, 880, 1202
TaiI	ACGT	4 cut(s)	435, 846, 1000, 1191
TaqI	TCGA	6 cut(s)	121, 327, 359, 585, 800, 1212
TaqII	GACCGA	1 cut(s)	313
TasI	AATT	5 cut(s)	252, 344, 742, 1133, 1160
TatI	WGTACW	5 cut(s)	307, 733, 985, 1000, 1027
TfiI	GAWTC	1 cut(s)	287
Tru1I	TTAA	5 cut(s)	453, 806, 821, 860, 1173
Tru9I	TTAA	5 cut(s)	453, 806, 821, 860, 1173
TscAI	CASTG	5 cut(s)	133, 498, 676, 883, 957
TseFI	GTSAC	4 cut(s)	476, 498, 673, 880
TseI	GCWGC	4 cut(s)	134, 545, 784, 1105
Tsp45I	GTSAC	4 cut(s)	476, 498, 673, 880
TspDTI	ATGAA	4 cut(s)	344, 402, 420, 1145
TspGWI	ACGGA	3 cut(s)	353, 506, 1008
TspRI	CASTG	5 cut(s)	133, 498, 676, 883, 957
Vha464I	CTTAAG	2 cut(s)	859, 1172
VpaK11BI	GGWCC	3 cut(s)	296, 693, 754
VspI	ATTAAT	1 cut(s)	821
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	3 cut(s)	252, 1133, 1160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	430
XhoI	CTCGAG	2 cut(s)	326, 584
XmnI	GAANNNNTTC	1 cut(s)	117
XspI	CTAG	4 cut(s)	701, 917, 1004, 1219
ZrmI	AGTACT	2 cut(s)	735, 1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.