Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Forward (+)

31671727 .. 31675115

Gene Structure 3389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G022400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGGCACAAGTGTGGAGGATGTGGTGATAGTCGGAGGAGGGATAGCCGGGCTGGGGACAGCGGTGGCGCTGAAGAGAGCTGGAATAGAAGCGTTGGTGCTGGAGAGATCGGAAGGGCTGCGAACCACTGGTGCAGCCTTGTCTCTATTCTCAAACGCCTGGTGTGCTCTTGATGCCTTGGGGGTTTCTCACAAGCTTGCTTCTTATACCCCCTCTCTCAAGAATTATGTAACTGATCTTGATACTGGAGAAGTTCAAGAAGTCTCTCTCACCGAAGCTAATGGTGATGCAGTTGGACCGAGAACAGTACATCGAAAAGCCTTGCTCGAGGCTTTGGCAGATGAATTATCGGTTCATTCAATCCGTTTCTCTTCCAAGATCTCTGCTATCGAAACCCAACAACATGAAGGTTCATCCATTGCCATTGTTCACATGGAAAATGGAACTGTAATTAAAGCAAAGGTTCTCATAGGGTGTGACGGGGTTCACTCAGTGGTGTCACGTTGGTTAGGACTCCGTGAACCAGTCTTTTCAGGTCGATCAGCTGTTCGTGGCTTGGCTGTTTATCCTCAAGGCCATGGACTCGAGCAGAATGTGCGACGGTATGTAGGATCAGGCAGAAACGCTGGCTTCGTTCCCCTCACCGACAAAGAGATCTATTGGTTCTTCTCTGGCATATCTCCAGCTAAAGGGGCCTCCCTGGCAGAAGATCCTGAAGATATACGAAAAGAAGTACTTGAGAATTATGCCAAGGACCTCCCACCTATATACTTAGATGTTGTGCAGCACGCAGATCTTTCGACATTAACATGGGCTCCGTTGATGTTTAGGTACCCCTGGAACGTAGTATTTGGAAACTTAAGCAAGCAAAACATCACGGTCGCTGGCGATGCCATGCACCCCATGACCCCTGATCTAGCACAGGGGGGTTGCTCAGCATTAGAAGATGCAGTGATCTTAGGCAGGCATATCGGGACATCCTTTGTACAGAATGGACAAGTACTTGTAGTGAAAAAGATGAGTGAAGTACTGGGCAAATACGTAGAAGAAAGAAGGTGGCGCGTCACTTTATTGATCATGTGGTCCTATATATCTGGATGGGTGCAACAGGGAGGATCTGGATGGGGTATGAAATTCTTGAGAGACACCATATTTTACAAGTTCCTTTTCCTTAAGATGGTAAAATACGTAACTTACGATTGTGGAAAACTCGACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

406

Amino Acids

44.32

Weight (kDa)

6.57

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	7 - 359	7.3e-25	FAD binding domain
DAO	PF01266	7 - 57	4.4e-08	FAD dependent oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	831
AccB1I	GGYRCC	1 cut(s)	831
AccII	CGCG	1 cut(s)	1062
AciI	CCGC	1 cut(s)	62
AclWI	GGATC	3 cut(s)	619, 704, 1123
AcsI	RAATTY	1 cut(s)	1133
AcuI	CTGAAG	2 cut(s)	92, 735
AdeI	CACNNNGTG	1 cut(s)	493
AfaI	GTAC	6 cut(s)	309, 735, 833, 987, 1002, 1029
AfiI	CCNNNNNNNGG	3 cut(s)	54, 689, 1177
AflII	CTTAAG	2 cut(s)	859, 1172
AgsI	TTSAA	2 cut(s)	257, 360
AjnI	CCWGG	3 cut(s)	158, 699, 836
AleI	CACNNNNGTG	1 cut(s)	11
AluBI	AGCT	5 cut(s)	80, 196, 278, 545, 686
AluI	AGCT	5 cut(s)	80, 196, 278, 545, 686
Alw21I	GWGCWC	1 cut(s)	169
Alw26I	GTCTC	3 cut(s)	147, 268, 1137
AlwI	GGATC	3 cut(s)	619, 704, 1123
Ama87I	CYCGRG	2 cut(s)	326, 584
AoxI	GGCC	2 cut(s)	574, 693
ApeKI	GCWGC	3 cut(s)	118, 134, 784
ApoI	RAATTY	1 cut(s)	1133
Asp718I	GGTACC	1 cut(s)	831
AspLEI	GCGC	2 cut(s)	70, 1062
AspS9I	GGNCC	4 cut(s)	296, 693, 754, 1083
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	4 cut(s)	37, 262, 296, 634
AvaI	CYCGRG	2 cut(s)	326, 584
AvaII	GGWCC	3 cut(s)	296, 754, 1083
BaeGI	GKGCMC	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	831
BanII	GRGCYC	1 cut(s)	817
Bbv12I	GWGCWC	1 cut(s)	169
BbvI	GCAGC	3 cut(s)	105, 146, 796
BccI	CCATC	3 cut(s)	1092, 1116, 1171
BcgI	CGANNNNNNTGC	4 cut(s)	780, 814, 952, 986
BciT130I	CCWGG	3 cut(s)	160, 701, 838
BclI	TGATCA	1 cut(s)	1074
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	3 cut(s)	147, 268, 1137
BfaI	CTAG	2 cut(s)	917, 1219
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	2 cut(s)	859, 1172
BglI	GCCNNNNNGGC	1 cut(s)	701
BglII	AGATCT	3 cut(s)	378, 654, 793
BisI	GCNGC	3 cut(s)	119, 135, 785
BlpI	GCTNAGC	1 cut(s)	934
BlsI	GCNGC	3 cut(s)	120, 136, 786
BmcAI	AGTACT	3 cut(s)	735, 1002, 1029
Bme1390I	CCNGG	4 cut(s)	49, 160, 701, 838
Bme18I	GGWCC	3 cut(s)	296, 754, 1083
BmeT110I	CYCGRG	2 cut(s)	326, 584
BmgT120I	GGNCC	4 cut(s)	296, 693, 754, 1083
BmiI	GGNNCC	3 cut(s)	694, 816, 833
BmrFI	CCNGG	4 cut(s)	49, 160, 701, 838
BmrI	ACTGGG	1 cut(s)	1040
BmsI	GCATC	4 cut(s)	163, 277, 880, 937
BmuI	ACTGGG	1 cut(s)	1040
BpmI	CTGGAG	3 cut(s)	122, 267, 666
Bpu1102I	GCTNAGC	1 cut(s)	934
BpuEI	CTTGAG	4 cut(s)	203, 555, 758, 1159
BpuMI	CCSGG	1 cut(s)	49
BsaAI	YACGTR	2 cut(s)	1042, 1189
BsaJI	CCNNGG	5 cut(s)	177, 577, 699, 750, 836
BsaXI	ACNNNNNCTCC	2 cut(s)	799, 829
Bsc4I	CCNNNNNNNGG	3 cut(s)	54, 689, 1177
Bse1I	ACTGG	4 cut(s)	133, 250, 524, 1035
Bse3DI	GCAATG	1 cut(s)	417
BseBI	CCWGG	3 cut(s)	160, 701, 838
BseDI	CCNNGG	5 cut(s)	177, 577, 699, 750, 836
BseGI	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BseLI	CCNNNNNNNGG	3 cut(s)	54, 689, 1177
BseMI	GCAATG	1 cut(s)	417
BseMII	CTCAG	2 cut(s)	504, 948
BseNI	ACTGG	4 cut(s)	133, 250, 524, 1035
BseRI	GAGGAG	1 cut(s)	51
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	3 cut(s)	105, 146, 796
BseYI	CCCAGC	1 cut(s)	52
BsgI	GTGCAG	2 cut(s)	153, 803
Bsh1236I	CGCG	1 cut(s)	1062
Bsh1285I	CGRYCG	1 cut(s)	882
BshFI	GGCC	2 cut(s)	576, 695
BshNI	GGYRCC	1 cut(s)	831
BsiEI	CGRYCG	1 cut(s)	882
BsiHKAI	GWGCWC	1 cut(s)	169
BsiHKCI	CYCGRG	2 cut(s)	326, 584
BsiSI	CCGG	1 cut(s)	48
BslFI	GGGAC	2 cut(s)	70, 988
BslI	CCNNNNNNNGG	3 cut(s)	54, 689, 1177
BsmAI	GTCTC	3 cut(s)	147, 268, 1137
BsmFI	GGGAC	2 cut(s)	70, 988
BsnI	GGCC	2 cut(s)	576, 695
BsoBI	CYCGRG	2 cut(s)	326, 584
Bsp1286I	GDGCHC	3 cut(s)	8, 169, 817
Bsp1407I	TGTACA	1 cut(s)	985
Bsp1720I	GCTNAGC	1 cut(s)	934
Bsp19I	CCATGG	1 cut(s)	577
BspACI	CCGC	1 cut(s)	62
BspANI	GGCC	2 cut(s)	576, 695
BspCNI	CTCAG	2 cut(s)	503, 947
BspFNI	CGCG	1 cut(s)	1062
BspLI	GGNNCC	3 cut(s)	694, 816, 833
BspPI	GGATC	3 cut(s)	619, 704, 1123
BspT107I	GGYRCC	1 cut(s)	831
BspTI	CTTAAG	2 cut(s)	859, 1172
BsrDI	GCAATG	1 cut(s)	417
BsrGI	TGTACA	1 cut(s)	985
BsrI	ACTGG	4 cut(s)	133, 250, 524, 1035
BssECI	CCNNGG	5 cut(s)	177, 577, 699, 750, 836
BssT1I	CCWWGG	3 cut(s)	177, 577, 750
Bst2UI	CCWGG	3 cut(s)	160, 701, 838
Bst4CI	ACNGT	4 cut(s)	307, 448, 603, 880
Bst6I	CTCTTC	2 cut(s)	68, 376
BstAFI	CTTAAG	2 cut(s)	859, 1172
BstAPI	GCANNNNNTGC	1 cut(s)	595
BstAUI	TGTACA	1 cut(s)	985
BstBAI	YACGTR	2 cut(s)	1042, 1189
BstC8I	GCNNGC	6 cut(s)	198, 628, 789, 866, 886, 965
BstDEI	CTNAG	4 cut(s)	490, 772, 934, 958
BstDSI	CCRYGG	1 cut(s)	577
BstF5I	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BstFNI	CGCG	1 cut(s)	1062
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 1062
BstMAI	GTCTC	3 cut(s)	147, 268, 1137
BstMCI	CGRYCG	1 cut(s)	882
BstMWI	GCNNNNNNNGC	6 cut(s)	164, 173, 595, 692, 701, 890
BstNI	CCWGG	3 cut(s)	160, 701, 838
BstSCI	CCNGG	4 cut(s)	47, 158, 699, 836
BstSLI	GKGCMC	1 cut(s)	8
BstSNI	TACGTA	2 cut(s)	1042, 1189
BstUI	CGCG	1 cut(s)	1062
BstV1I	GCAGC	3 cut(s)	105, 146, 796
BstX2I	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
BstYI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
BsuRI	GGCC	2 cut(s)	576, 695
BtgI	CCRYGG	1 cut(s)	577
BtgZI	GCGATG	1 cut(s)	903
BtsCI	GGATG	5 cut(s)	25, 413, 977, 1103, 1127
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	3 cut(s)	126, 498, 957
Cac8I	GCNNGC	6 cut(s)	198, 628, 789, 866, 886, 965
CfoI	GCGC	2 cut(s)	70, 1062
Cfr13I	GGNCC	4 cut(s)	296, 693, 754, 1083
CseI	GACGC	1 cut(s)	1051
Csp6I	GTAC	6 cut(s)	308, 734, 832, 986, 1001, 1028
CviAII	CATG	7 cut(s)	404, 433, 578, 810, 895, 904, 1078
CviQI	GTAC	6 cut(s)	308, 734, 832, 986, 1001, 1028
DdeI	CTNAG	4 cut(s)	490, 772, 934, 958
DraIII	CACNNNGTG	1 cut(s)	493
Eam1104I	CTCTTC	2 cut(s)	68, 376
EarI	CTCTTC	2 cut(s)	68, 376
Eco105I	TACGTA	2 cut(s)	1042, 1189
Eco130I	CCWWGG	3 cut(s)	177, 577, 750
Eco24I	GRGCYC	1 cut(s)	817
Eco47I	GGWCC	3 cut(s)	296, 754, 1083
Eco57I	CTGAAG	2 cut(s)	92, 735
Eco88I	CYCGRG	2 cut(s)	326, 584
EcoO109I	RGGNCCY	2 cut(s)	693, 754
EcoRII	CCWGG	3 cut(s)	158, 699, 836
EcoT14I	CCWWGG	3 cut(s)	177, 577, 750
EcoT38I	GRGCYC	1 cut(s)	817
ErhI	CCWWGG	3 cut(s)	177, 577, 750
FaeI	CATG	7 cut(s)	407, 436, 581, 813, 898, 907, 1081
FalI	AAGNNNNNCTT	2 cut(s)	720, 752
FaqI	GGGAC	2 cut(s)	70, 988
FatI	CATG	7 cut(s)	403, 432, 577, 809, 894, 903, 1077
FbaI	TGATCA	1 cut(s)	1074
Fnu4HI	GCNGC	3 cut(s)	119, 135, 785
FokI	GGATG	5 cut(s)	32, 400, 964, 1110, 1134
FriOI	GRGCYC	1 cut(s)	817
Fsp4HI	GCNGC	3 cut(s)	119, 135, 785
FspBI	CTAG	2 cut(s)	917, 1219
GlaI	GCGC	2 cut(s)	69, 1061
GluI	GCNGC	3 cut(s)	119, 135, 785
GsaI	CCCAGC	1 cut(s)	56
GsuI	CTGGAG	3 cut(s)	122, 267, 666
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	2 cut(s)	576, 695
HapII	CCGG	1 cut(s)	48
HgaI	GACGC	1 cut(s)	1051
HhaI	GCGC	2 cut(s)	70, 1062
Hin1II	CATG	7 cut(s)	407, 436, 581, 813, 898, 907, 1081
Hin6I	GCGC	2 cut(s)	68, 1060
HinP1I	GCGC	2 cut(s)	68, 1060
HindIII	AAGCTT	1 cut(s)	194
HinfI	GANTC	2 cut(s)	513, 582
HpaII	CCGG	1 cut(s)	48
HphI	GGTGA	4 cut(s)	37, 262, 296, 634
Hpy166II	GTNNAC	3 cut(s)	430, 487, 521
Hpy188I	TCNGA	2 cut(s)	35, 112
Hpy188III	TCNNGA	9 cut(s)	170, 220, 239, 257, 713, 973, 1095, 1119, 1138
Hpy8I	GTNNAC	3 cut(s)	430, 487, 521
Hpy99I	CGWCG	1 cut(s)	603
HpyAV	CCTTC	3 cut(s)	107, 401, 1047
HpyCH4III	ACNGT	4 cut(s)	307, 448, 603, 880
HpyCH4IV	ACGT	4 cut(s)	502, 843, 1041, 1188
HpyCH4V	TGCA	6 cut(s)	134, 290, 784, 898, 950, 1105
HpyF10VI	GCNNNNNNNGC	6 cut(s)	164, 173, 595, 692, 701, 890
HpyF3I	CTNAG	4 cut(s)	490, 772, 934, 958
HpySE526I	ACGT	4 cut(s)	502, 843, 1041, 1188
Hsp92II	CATG	7 cut(s)	407, 436, 581, 813, 898, 907, 1081
HspAI	GCGC	2 cut(s)	68, 1060
KpnI	GGTACC	1 cut(s)	835
Ksp22I	TGATCA	1 cut(s)	1074
LmnI	GCTCC	1 cut(s)	820
Lsp1109I	GCAGC	3 cut(s)	105, 146, 796
LweI	GCATC	4 cut(s)	163, 277, 880, 937
MaeI	CTAG	2 cut(s)	917, 1219
MaeII	ACGT	4 cut(s)	502, 843, 1041, 1188
MaeIII	GTNAC	5 cut(s)	229, 476, 498, 1063, 1189
MboII	GAAGA	7 cut(s)	85, 363, 658, 719, 728, 956, 1058
MflI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
MhlI	GDGCHC	3 cut(s)	8, 169, 817
MluCI	AATT	5 cut(s)	223, 344, 450, 742, 1133
MlyI	GAGTC	2 cut(s)	507, 576
MmeI	TCCRAC	2 cut(s)	13, 274
MseI	TTAA	4 cut(s)	453, 806, 860, 1173
MslI	CAYNNNNRTG	2 cut(s)	11, 808
MspA1I	CMGCKG	2 cut(s)	62, 545
MspCI	CTTAAG	2 cut(s)	859, 1172
MspI	CCGG	1 cut(s)	48
MspR9I	CCNGG	4 cut(s)	49, 160, 701, 838
MvaI	CCWGG	3 cut(s)	160, 701, 838
MvnI	CGCG	1 cut(s)	1062
MwoI	GCNNNNNNNGC	6 cut(s)	164, 173, 595, 692, 701, 890
NciI	CCSGG	1 cut(s)	49
NcoI	CCATGG	1 cut(s)	577
NlaIII	CATG	7 cut(s)	407, 436, 581, 813, 898, 907, 1081
NlaIV	GGNNCC	3 cut(s)	694, 816, 833
NmuCI	GTSAC	3 cut(s)	476, 498, 1063
OliI	CACNNNNGTG	1 cut(s)	11
PaeR7I	CTCGAG	2 cut(s)	326, 584
PcsI	WCGNNNNNNNCGW	2 cut(s)	630, 1194
PkrI	GCNGC	3 cut(s)	120, 136, 786
PleI	GAGTC	2 cut(s)	507, 576
PpsI	GAGTC	2 cut(s)	507, 576
Ppu21I	YACGTR	2 cut(s)	1042, 1189
PpuMI	RGGWCCY	1 cut(s)	754
Psp5II	RGGWCCY	1 cut(s)	754
Psp6I	CCWGG	3 cut(s)	158, 699, 836
PspFI	CCCAGC	1 cut(s)	52
PspGI	CCWGG	3 cut(s)	158, 699, 836
PspN4I	GGNNCC	3 cut(s)	694, 816, 833
PspPI	GGNCC	4 cut(s)	296, 693, 754, 1083
PspPPI	RGGWCCY	1 cut(s)	754
PspXI	VCTCGAGB	2 cut(s)	326, 584
PsuI	RGATCY	5 cut(s)	378, 654, 709, 793, 1115
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	6 cut(s)	309, 735, 833, 987, 1002, 1029
RsaNI	GTAC	6 cut(s)	308, 734, 832, 986, 1001, 1028
RseI	CAYNNNNRTG	2 cut(s)	11, 808
SaqAI	TTAA	4 cut(s)	453, 806, 860, 1173
SatI	GCNGC	3 cut(s)	119, 135, 785
Sau96I	GGNCC	4 cut(s)	296, 693, 754, 1083
ScaI	AGTACT	3 cut(s)	735, 1002, 1029
SchI	GAGTC	2 cut(s)	507, 576
ScrFI	CCNGG	4 cut(s)	49, 160, 701, 838
SduI	GDGCHC	3 cut(s)	8, 169, 817
SfaNI	GCATC	4 cut(s)	163, 277, 880, 937
Sfr274I	CTCGAG	2 cut(s)	326, 584
SinI	GGWCC	3 cut(s)	296, 754, 1083
SlaI	CTCGAG	2 cut(s)	326, 584
SmiMI	CAYNNNNRTG	2 cut(s)	11, 808
SmlI	CTYRAG	8 cut(s)	218, 326, 570, 584, 737, 859, 1138, 1172
SmoI	CTYRAG	8 cut(s)	218, 326, 570, 584, 737, 859, 1138, 1172
SnaBI	TACGTA	2 cut(s)	1042, 1189
Sse9I	AATT	5 cut(s)	223, 344, 450, 742, 1133
SsiI	CCGC	1 cut(s)	62
SspMI	CTAG	2 cut(s)	917, 1219
StyD4I	CCNGG	4 cut(s)	47, 158, 699, 836
StyI	CCWWGG	3 cut(s)	177, 577, 750
TaaI	ACNGT	4 cut(s)	307, 448, 603, 880
TaiI	ACGT	4 cut(s)	505, 846, 1044, 1191
TaqI	TCGA	7 cut(s)	313, 327, 390, 538, 585, 800, 1212
TaqII	GACCGA	1 cut(s)	313
TasI	AATT	5 cut(s)	223, 344, 450, 742, 1133
TatI	WGTACW	5 cut(s)	307, 733, 985, 1000, 1027
Tru1I	TTAA	4 cut(s)	453, 806, 860, 1173
Tru9I	TTAA	4 cut(s)	453, 806, 860, 1173
TscAI	CASTG	3 cut(s)	133, 498, 957
TseFI	GTSAC	3 cut(s)	476, 498, 1063
TseI	GCWGC	3 cut(s)	118, 134, 784
Tsp45I	GTSAC	3 cut(s)	476, 498, 1063
TspDTI	ATGAA	5 cut(s)	344, 357, 402, 420, 1145
TspGWI	ACGGA	3 cut(s)	353, 506, 807
TspRI	CASTG	3 cut(s)	133, 498, 957
Vha464I	CTTAAG	2 cut(s)	859, 1172
VpaK11BI	GGWCC	3 cut(s)	296, 754, 1083
XapI	RAATTY	1 cut(s)	1133
XcmI	CCANNNNNNNNNTGG	1 cut(s)	430
XhoI	CTCGAG	2 cut(s)	326, 584
XspI	CTAG	2 cut(s)	917, 1219
ZrmI	AGTACT	3 cut(s)	735, 1002, 1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.