pycom11g20520

Zeaxanthin epoxidase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
23555069 .. 23556908
1840 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g20520.5

Sequence Viewer

Length: 1221 bp
ATGATGGCAAGAGTGGAGGACGTGGTGATAGTAGGGGCAGGAATAGCAGGGTTGGCGACTGCTGTGGCGCTCAAGAAAGCTGGAGTTAAAGCGTTGGTGTTGGAGAAATCAGACGGCCTCAGAACCACCGGTGCAGCTTTAACCCTCTTCCCCAACGCTTGGTGTGCCCTTGACGCCTTGGGTGTTTCCCACCACCTCGCTTCTCTTTATGCTACAATAAAAAAGGGATATGTAACTAATATTGACACCGGAGAAATCCAAGAAATGTCTTTTCCCGCATCCAATGGAAATGACCTAGTTGGACCAAGATCAGTACACCGAAAAGCTTTACTCAAGGCTTTGGCAGATGAGTTACCACCAAATTCCATCCGTTTCGCTTCCAAACCTACTGCTATCGAGACCCAAGAACATGAAGGCTCGTCCATTTCAGTTATTCACTTGGGAGATGGGACAATAATCAAAGCAAAGGTTCTGATAGGCTGCGATGGGATTCACTCAGTGGTTGCCCGCTTCTTAGGACTTGCCGAACCAGTATATGCAGGTCGATCAGCAGTTCGTGGCTTGGCTGTGTTTCCTCAAGGCCACGGATTGGACAATAACGTGCAGCAATATGGAGGACTTAACAGAAGGGCTGGTTTTGTTCCCCTCAATGACAAAGAGATCTATTGGTTCTTTGGCATATGTCTGGCTAAAGGGGCGGATCCTTCCAATGACCCGGAAGTTATAAAACGAGAAGTGATTGAGAATTATGCCAAGGATCTTCCTCCTATATACCTAGACGTTGTACGGCACTCGGATCTTTCAACGTTGTCATGGGCTCCAATAATGTTCAGGTACCCGTGGCATGTAGTATTCGGGAACCTGGGGAAGCAAAACATCACGGTGGCTGGTGATGCCATGCATCCCATGACACCTGATTTAGGACAAGGAGGTTGCGTGGCATTGGAAGATGCAGTGGTCTTGGGCAGATACATAGGGAAATCCTTTGTACAAAATGGACAAATCGTGCCAAAAGAGATGGTTAGTGCGATTGGGAAATACGTGGAAGAAAGAAGGTGGCGTGTCGCACTGTTGATTGCAGGATCATATTTATCAGGATGGATACAGCAGCCGGGGTCTGGTGGGGTTATGAAGTTCTTGAGGGATACCATATTTTACGGGTTCATTTTCCATAAACTTGTTAAACTTTCACATTATGATTGTGGAAAACTTGATTTCTAG

Protein Analysis

407

Amino Acids

43.94

Weight (kDa)

8.45

Isoelectric Point (pI)

34.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 725
Acc36I ACCTGC 1 cut(s) 530
Acc65I GGTACC 1 cut(s) 834
AccB1I GGYRCC 1 cut(s) 834
AccB7I CCANNNNNTGG 2 cut(s) 159, 589
AciI CCGC 3 cut(s) 276, 508, 698
AclI AACGTT 1 cut(s) 806
AclWI GGATC 5 cut(s) 695, 708, 765, 804, 1090
AcsI RAATTY 1 cut(s) 361
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 499
AfaI GTAC 4 cut(s) 315, 786, 836, 990
AfiI CCNNNNNNNGG 4 cut(s) 159, 589, 920, 1118
AgeI ACCGGT 1 cut(s) 128
AgsI TTSAA 1 cut(s) 804
AjiI CACGTC 1 cut(s) 22
AjnI CCWGG 1 cut(s) 861
AluBI AGCT 3 cut(s) 80, 137, 326
AluI AGCT 3 cut(s) 80, 137, 326
Alw26I GTCTC 1 cut(s) 392
AlwI GGATC 5 cut(s) 695, 708, 765, 804, 1090
AoxI GGCC 2 cut(s) 115, 580
ApeKI GCWGC 4 cut(s) 134, 480, 604, 1108
ApoI RAATTY 1 cut(s) 361
AsiGI ACCGGT 1 cut(s) 128
Asp718I GGTACC 1 cut(s) 834
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 1 cut(s) 302
AsuC2I CCSGG 2 cut(s) 716, 1113
AsuHPI GGTGA 2 cut(s) 37, 902
AvaII GGWCC 1 cut(s) 302
BaeGI GKGCMC 1 cut(s) 169
BamHI GGATCC 1 cut(s) 700
BanI GGYRCC 1 cut(s) 834
BanII GRGCYC 1 cut(s) 820
BbvI GCAGC 4 cut(s) 146, 467, 616, 1120
BccI CCATC 5 cut(s) 374, 440, 479, 1012, 1092
BceAI ACGGC 2 cut(s) 130, 803
BciT130I CCWGG 1 cut(s) 863
BciVI GTATCC 2 cut(s) 1095, 1138
BcnI CCSGG 2 cut(s) 716, 1113
BcoDI GTCTC 1 cut(s) 392
BfaI CTAG 3 cut(s) 296, 776, 1219
BfoI RGCGCY 1 cut(s) 71
BfuAI ACCTGC 1 cut(s) 530
BfuI GTATCC 2 cut(s) 1095, 1138
BglII AGATCT 1 cut(s) 660
BisI GCNGC 4 cut(s) 135, 481, 605, 1109
BlsI GCNGC 4 cut(s) 136, 482, 606, 1110
Bme1390I CCNGG 3 cut(s) 716, 863, 1113
Bme18I GGWCC 1 cut(s) 302
BmgBI CACGTC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 302
BmiI GGNNCC 4 cut(s) 702, 819, 836, 860
BmrFI CCNGG 3 cut(s) 716, 863, 1113
BmsI GCATC 4 cut(s) 287, 883, 910, 940
BpmI CTGGAG 1 cut(s) 102
BpuEI CTTGAG 4 cut(s) 56, 317, 561, 1159
BpuMI CCSGG 2 cut(s) 716, 1113
BsaAI YACGTR 1 cut(s) 1042
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 6 cut(s) 177, 583, 753, 839, 862, 1112
BsaWI WCCGGW 2 cut(s) 128, 248
BsaXI ACNNNNNCTCC 2 cut(s) 921, 951
Bsc4I CCNNNNNNNGG 4 cut(s) 159, 589, 920, 1118
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 1 cut(s) 530
BseBI CCWGG 1 cut(s) 863
BseDI CCNNGG 6 cut(s) 177, 583, 753, 839, 862, 1112
BseGI GGATG 4 cut(s) 278, 366, 901, 1103
BseLI CCNNNNNNNGG 4 cut(s) 159, 589, 920, 1118
BseMII CTCAG 2 cut(s) 133, 510
BseNI ACTGG 1 cut(s) 530
BseSI GKGCMC 1 cut(s) 169
BseXI GCAGC 4 cut(s) 146, 467, 616, 1120
BsgI GTGCAG 2 cut(s) 153, 623
BshFI GGCC 2 cut(s) 117, 582
BshNI GGYRCC 1 cut(s) 834
BshTI ACCGGT 1 cut(s) 128
BsiSI CCGG 4 cut(s) 129, 249, 716, 1112
BslFI GGGAC 1 cut(s) 463
BslI CCNNNNNNNGG 4 cut(s) 159, 589, 920, 1118
BsmAI GTCTC 1 cut(s) 392
BsmFI GGGAC 1 cut(s) 463
BsnI GGCC 2 cut(s) 117, 582
Bso31I GGTCTC 1 cut(s) 392
Bsp1286I GDGCHC 2 cut(s) 169, 820
Bsp1407I TGTACA 1 cut(s) 988
Bsp143I GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
BspACI CCGC 3 cut(s) 276, 508, 698
BspANI GGCC 2 cut(s) 117, 582
BspCNI CTCAG 2 cut(s) 132, 509
BspLI GGNNCC 4 cut(s) 702, 819, 836, 860
BspMI ACCTGC 1 cut(s) 530
BspPI GGATC 5 cut(s) 695, 708, 765, 804, 1090
BspT107I GGYRCC 1 cut(s) 834
BspTNI GGTCTC 1 cut(s) 392
BsrFI RCCGGY 1 cut(s) 128
BsrGI TGTACA 1 cut(s) 988
BsrI ACTGG 1 cut(s) 530
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 6 cut(s) 177, 583, 753, 839, 862, 1112
BssMI GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
BssNI GRCGYC 1 cut(s) 174
BssT1I CCWWGG 2 cut(s) 177, 753
Bst2UI CCWGG 1 cut(s) 863
Bst4CI ACNGT 2 cut(s) 883, 1071
Bst6I CTCTTC 1 cut(s) 152
BstACI GRCGYC 1 cut(s) 174
BstAUI TGTACA 1 cut(s) 988
BstBAI YACGTR 1 cut(s) 1042
BstC8I GCNNGC 1 cut(s) 508
BstDEI CTNAG 3 cut(s) 119, 496, 514
BstDSI CCRYGG 2 cut(s) 583, 839
BstENI CCTNNNNNAGG 1 cut(s) 918
BstF5I GGATG 4 cut(s) 278, 366, 901, 1103
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 7 cut(s) 311, 548, 663, 703, 760, 799, 1085
BstMAI GTCTC 1 cut(s) 392
BstMBI GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
BstMWI GCNNNNNNNGC 6 cut(s) 44, 53, 164, 173, 695, 893
BstNI CCWGG 1 cut(s) 863
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 3 cut(s) 714, 861, 1111
BstSLI GKGCMC 1 cut(s) 169
BstV1I GCAGC 4 cut(s) 146, 467, 616, 1120
BstX2I RGATCY 4 cut(s) 660, 700, 757, 796
BstYI RGATCY 4 cut(s) 660, 700, 757, 796
BsuI GTATCC 2 cut(s) 1095, 1138
BsuRI GGCC 2 cut(s) 117, 582
BtgI CCRYGG 2 cut(s) 583, 839
BtgZI GCGATG 1 cut(s) 498
BtrI CACGTC 1 cut(s) 22
BtsCI GGATG 4 cut(s) 278, 366, 901, 1103
BtsI GCAGTG 1 cut(s) 960
BtsIMutI CAGTG 3 cut(s) 504, 960, 1067
BveI ACCTGC 1 cut(s) 530
Cac8I GCNNGC 1 cut(s) 508
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 302
CseI GACGC 1 cut(s) 182
Csp6I GTAC 4 cut(s) 314, 785, 835, 989
CspAI ACCGGT 1 cut(s) 128
CviAII CATG 5 cut(s) 410, 813, 845, 898, 907
CviQI GTAC 4 cut(s) 314, 785, 835, 989
DdeI CTNAG 3 cut(s) 119, 496, 514
DpnI GATC 7 cut(s) 310, 547, 662, 702, 759, 798, 1084
DpnII GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
DraIII CACNNNGTG 1 cut(s) 499
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
EciI GGCGGA 1 cut(s) 713
Eco130I CCWWGG 2 cut(s) 177, 753
Eco24I GRGCYC 1 cut(s) 820
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 1 cut(s) 302
EcoNI CCTNNNNNAGG 1 cut(s) 918
EcoRII CCWGG 1 cut(s) 861
EcoT14I CCWWGG 2 cut(s) 177, 753
EcoT22I ATGCAT 1 cut(s) 903
EcoT38I GRGCYC 1 cut(s) 820
ErhI CCWWGG 2 cut(s) 177, 753
FaeI CATG 5 cut(s) 413, 816, 848, 901, 910
FaqI GGGAC 1 cut(s) 463
FatI CATG 5 cut(s) 409, 812, 844, 897, 906
FauI CCCGC 2 cut(s) 283, 515
FauNDI CATATG 1 cut(s) 680
Fnu4HI GCNGC 4 cut(s) 135, 481, 605, 1109
FokI GGATG 4 cut(s) 265, 353, 888, 1110
FriOI GRGCYC 1 cut(s) 820
Fsp4HI GCNGC 4 cut(s) 135, 481, 605, 1109
FspBI CTAG 3 cut(s) 296, 776, 1219
GlaI GCGC 1 cut(s) 69
GluI GCNGC 4 cut(s) 135, 481, 605, 1109
GsuI CTGGAG 1 cut(s) 102
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 2 cut(s) 117, 582
HapII CCGG 4 cut(s) 129, 249, 716, 1112
HgaI GACGC 1 cut(s) 182
HhaI GCGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 5 cut(s) 413, 816, 848, 901, 910
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HindIII AAGCTT 1 cut(s) 324
HinfI GANTC 1 cut(s) 490
HpaII CCGG 4 cut(s) 129, 249, 716, 1112
HphI GGTGA 2 cut(s) 37, 902
Hpy166II GTNNAC 1 cut(s) 316
Hpy188I TCNGA 4 cut(s) 112, 122, 474, 796
Hpy188III TCNNGA 5 cut(s) 73, 397, 856, 1095, 1138
Hpy8I GTNNAC 1 cut(s) 316
HpyAV CCTTC 4 cut(s) 407, 621, 714, 1047
HpyCH4III ACNGT 2 cut(s) 883, 1071
HpyCH4IV ACGT 5 cut(s) 21, 600, 780, 806, 1041
HpyCH4V TGCA 6 cut(s) 134, 539, 604, 901, 953, 1079
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 53, 164, 173, 695, 893
HpyF3I CTNAG 3 cut(s) 119, 496, 514
HpySE526I ACGT 5 cut(s) 21, 600, 780, 806, 1041
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 5 cut(s) 413, 816, 848, 901, 910
HspAI GCGC 1 cut(s) 68
KpnI GGTACC 1 cut(s) 838
Kzo9I GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
LmnI GCTCC 1 cut(s) 823
Lsp1109I GCAGC 4 cut(s) 146, 467, 616, 1120
LweI GCATC 4 cut(s) 287, 883, 910, 940
MaeI CTAG 3 cut(s) 296, 776, 1219
MaeII ACGT 5 cut(s) 21, 600, 780, 806, 1041
MaeIII GTNAC 2 cut(s) 232, 351
MalI GATC 7 cut(s) 310, 547, 662, 702, 759, 798, 1084
MboI GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
MboII GAAGA 4 cut(s) 139, 752, 959, 1058
MflI RGATCY 4 cut(s) 660, 700, 757, 796
MhlI GDGCHC 2 cut(s) 169, 820
MluCI AATT 2 cut(s) 361, 745
MmeI TCCRAC 2 cut(s) 81, 280
Mph1103I ATGCAT 1 cut(s) 903
MseI TTAA 4 cut(s) 87, 140, 621, 1182
MslI CAYNNNNRTG 1 cut(s) 881
MspI CCGG 4 cut(s) 129, 249, 716, 1112
MspR9I CCNGG 3 cut(s) 716, 863, 1113
MvaI CCWGG 1 cut(s) 863
MwoI GCNNNNNNNGC 6 cut(s) 44, 53, 164, 173, 695, 893
NciI CCSGG 2 cut(s) 716, 1113
NdeI CATATG 1 cut(s) 680
NdeII GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
NlaIII CATG 5 cut(s) 413, 816, 848, 901, 910
NlaIV GGNNCC 4 cut(s) 702, 819, 836, 860
NsiI ATGCAT 1 cut(s) 903
NspI RCATGY 1 cut(s) 848
PfeI GAWTC 1 cut(s) 490
PflMI CCANNNNNTGG 2 cut(s) 159, 589
PinAI ACCGGT 1 cut(s) 128
PkrI GCNGC 4 cut(s) 136, 482, 606, 1110
Ppu21I YACGTR 1 cut(s) 1042
PsiI TTATAA 1 cut(s) 725
Psp1406I AACGTT 1 cut(s) 806
Psp6I CCWGG 1 cut(s) 861
PspGI CCWGG 1 cut(s) 861
PspN4I GGNNCC 4 cut(s) 702, 819, 836, 860
PspPI GGNCC 1 cut(s) 302
PsuI RGATCY 4 cut(s) 660, 700, 757, 796
RsaI GTAC 4 cut(s) 315, 786, 836, 990
RsaNI GTAC 4 cut(s) 314, 785, 835, 989
RseI CAYNNNNRTG 1 cut(s) 881
SaqAI TTAA 4 cut(s) 87, 140, 621, 1182
SatI GCNGC 4 cut(s) 135, 481, 605, 1109
Sau3AI GATC 7 cut(s) 308, 545, 660, 700, 757, 796, 1082
Sau96I GGNCC 1 cut(s) 302
ScrFI CCNGG 3 cut(s) 716, 863, 1113
SduI GDGCHC 2 cut(s) 169, 820
SfaNI GCATC 4 cut(s) 287, 883, 910, 940
SgrAI CRCCGGYG 1 cut(s) 128
SinI GGWCC 1 cut(s) 302
SmiMI CAYNNNNRTG 1 cut(s) 881
SmlI CTYRAG 4 cut(s) 71, 332, 576, 1138
SmoI CTYRAG 4 cut(s) 71, 332, 576, 1138
Sse9I AATT 2 cut(s) 361, 745
SsiI CCGC 3 cut(s) 276, 508, 698
SspI AATATT 1 cut(s) 241
SspMI CTAG 3 cut(s) 296, 776, 1219
StyD4I CCNGG 3 cut(s) 714, 861, 1111
StyI CCWWGG 2 cut(s) 177, 753
TaaI ACNGT 2 cut(s) 883, 1071
TaiI ACGT 5 cut(s) 24, 603, 783, 809, 1044
TaqI TCGA 2 cut(s) 396, 544
TasI AATT 2 cut(s) 361, 745
TatI WGTACW 2 cut(s) 313, 988
TfiI GAWTC 1 cut(s) 490
Tru1I TTAA 4 cut(s) 87, 140, 621, 1182
Tru9I TTAA 4 cut(s) 87, 140, 621, 1182
TscAI CASTG 3 cut(s) 504, 960, 1074
TseI GCWGC 4 cut(s) 134, 480, 604, 1108
TspDTI ATGAA 3 cut(s) 426, 1145, 1153
TspGWI ACGGA 2 cut(s) 359, 600
TspRI CASTG 3 cut(s) 504, 960, 1074
Van91I CCANNNNNTGG 2 cut(s) 159, 589
VpaK11BI GGWCC 1 cut(s) 302
XagI CCTNNNNNAGG 1 cut(s) 918
XapI RAATTY 1 cut(s) 361
XceI RCATGY 1 cut(s) 848
XspI CTAG 3 cut(s) 296, 776, 1219
Zsp2I ATGCAT 1 cut(s) 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.