Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Forward (+)

37238142 .. 37240929

Gene Structure 2788 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG306000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGTTTGTGTTTGTTAGAAACAGAAATCGAGTCGAAGAGAGAGCAAGAGATCGAGCTAGCAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGACGGCGATGGAAACAATGGTGGAGGATGTGGTGATAGTAGGGGCAGGGATAGCCGGTTTGGCCACTGCAGTGGCGCTGAAGAGAGCAGGAATTGAAGCCCTTGTGTTGGAGAGATCCGAAGGGCTGAGAGCCACAGGTGCAGCCTTGACTCTATACCCCAACGCTTGGTCTGCTCTTGATGCATTGGGAATTTCTCAGAAGCTCGCAACTCGTTACGCCCCCACGCTAAAGGGACATATAATTGATGTTGACACAGGAGAAGTTCAAGAAGTTTCTAGAGCCATAACCAATGAGGTTCCAGTTGGACCGAGATGTTTACACCGGAAAGCCTTACTCGAGGCCTTGGCAGATGAATTACCAATTCATTCAGTCCGTTTCTCTTCCAAGATCACTGCTATTGATACCCAACAACATGAAGGTTCATCCCTTGCCATTGTTCACATGGAAAATGGAACTATTATCAAAGCAAAGGTTCTGATAGGGTGTGACGGTGTGCACTCGGTGGTGTCACGCTGGTTAGGGCTCGGTGAACCAGTCCTTTCGGGTCGATCAGCGGTTCGTGGATTGGCTGTGTTTCCTCAAGGCCATGGACTCGGCCAAAACTTTCGACAGTACGTAGGAACAGGCATAAGGGCTGGTTTTATTCCCGTTTCTGACAAAGACGTATATTGGTTCTTCAGTTGCATATCTCCAGCTAAAGGTGAAAGCTTGGGAGAGGATCCGAAAGAAACTAAAAAACAAGTACTTGAGAATTATGCCAAGGACCTCCCACCTTTATACCTAGACGTTGTGCAGCACTCGGATCTTTCAACGTTGACAAGGGCTCCGCTGAAGTTCAGATATCCATGGCATGTTGTATTTGGGAACTTAAGCAAGCAAAACATCACGGTGGCCGGCGATGCCATGCACCCGATGACACCTGATTTAGCACAAGGGGGTGGCTCAGCCTTAGAAGATGCCGTGATCTTAGGCAGACACATAGGGAAATCCTTTGTTAAAAATGGACGAGTTCTGGTGCCAAAAGAGATGGCCGTCGCAATTGACAAATATATAGAAGAAAGAAGGTGGCACGTTGCTTTGTTGATTGCGGGATCTTATATATCAGGATGGGTGCAACAAGCAGGGTCTGGCTGGGGTAAGAAATTCTTGAGGGATGTCATGTTTTACAAGTTCCTTTACCCTAAAATTGTTAGATATATGCACTATGACTGTGGAAAACTTGATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

439

Amino Acids

48.5

Weight (kDa)

9.06

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	39 - 359	1.4e-24	FAD binding domain
DAO	PF01266	39 - 86	4e-07	FAD dependent oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1105
AccB7I	CCANNNNNTGG	1 cut(s)	255
AciI	CCGC	3 cut(s)	644, 917, 1178
AclI	AACGTT	1 cut(s)	902
AclWI	GGATC	5 cut(s)	198, 803, 816, 900, 1189
AcoI	YGGCCR	4 cut(s)	150, 685, 981, 1119
AcsI	RAATTY	2 cut(s)	279, 1232
AcuI	CTGAAG	3 cut(s)	188, 751, 941
AdeI	CACNNNGTG	1 cut(s)	592
AfaI	GTAC	2 cut(s)	704, 834
AfiI	CCNNNNNNNGG	3 cut(s)	196, 255, 788
AflII	CTTAAG	1 cut(s)	958
AgsI	TTSAA	3 cut(s)	185, 356, 900
AleI	CACNNNNGTG	1 cut(s)	158
AluBI	AGCT	4 cut(s)	56, 292, 785, 798
AluI	AGCT	4 cut(s)	56, 292, 785, 798
Alw21I	GWGCWC	1 cut(s)	588
Alw26I	GTCTC	1 cut(s)	83
Alw44I	GTGCAC	1 cut(s)	584
AlwI	GGATC	5 cut(s)	198, 803, 816, 900, 1189
AlwNI	CAGNNNCTG	1 cut(s)	1217
Ama87I	CYCGRG	1 cut(s)	425
AoxI	GGCC	6 cut(s)	150, 429, 673, 685, 981, 1119
ApaLI	GTGCAC	1 cut(s)	584
ApeKI	GCWGC	2 cut(s)	230, 883
ApoI	RAATTY	2 cut(s)	279, 1232
AspLEI	GCGC	1 cut(s)	166
AspS9I	GGNCC	2 cut(s)	395, 853
AsuHPI	GGTGA	3 cut(s)	133, 629, 803
AsuNHI	GCTAGC	1 cut(s)	56
AvaI	CYCGRG	1 cut(s)	425
AvaII	GGWCC	2 cut(s)	395, 853
BaeGI	GKGCMC	1 cut(s)	588
BalI	TGGCCA	1 cut(s)	152
BamHI	GGATCC	1 cut(s)	808
BanI	GGYRCC	1 cut(s)	1105
BanII	GRGCYC	2 cut(s)	615, 916
Bbv12I	GWGCWC	1 cut(s)	588
BbvI	GCAGC	2 cut(s)	242, 895
BccI	CCATC	3 cut(s)	91, 1111, 1191
BceAI	ACGGC	3 cut(s)	108, 1034, 1106
BcoDI	GTCTC	1 cut(s)	83
BfaI	CTAG	4 cut(s)	57, 366, 872, 1318
BfmI	CTRYAG	1 cut(s)	156
BfoI	RGCGCY	1 cut(s)	167
BfrI	CTTAAG	1 cut(s)	958
BglI	GCCNNNNNGGC	1 cut(s)	149
BisI	GCNGC	2 cut(s)	231, 884
BlpI	GCTNAGC	1 cut(s)	1033
BlsI	GCNGC	2 cut(s)	232, 885
BmcAI	AGTACT	1 cut(s)	834
Bme18I	GGWCC	2 cut(s)	395, 853
BmeT110I	CYCGRG	1 cut(s)	425
BmgT120I	GGNCC	2 cut(s)	395, 853
BmiI	GGNNCC	4 cut(s)	387, 810, 915, 1107
BmsI	GCATC	3 cut(s)	259, 979, 1036
BmtI	GCTAGC	1 cut(s)	60
BpmI	CTGGAG	1 cut(s)	765
Bpu1102I	GCTNAGC	1 cut(s)	1033
BpuEI	CTTGAG	3 cut(s)	654, 857, 1258
BsaAI	YACGTR	1 cut(s)	706
BsaJI	CCNNGG	4 cut(s)	432, 676, 849, 935
BsaWI	WCCGGW	1 cut(s)	411
BsaXI	ACNNNNNCTCC	2 cut(s)	898, 928
Bsc4I	CCNNNNNNNGG	3 cut(s)	196, 255, 788
Bse118I	RCCGGY	2 cut(s)	143, 983
Bse1I	ACTGG	2 cut(s)	389, 623
BseDI	CCNNGG	4 cut(s)	432, 676, 849, 935
BseGI	GGATG	4 cut(s)	121, 512, 1202, 1249
BseLI	CCNNNNNNNGG	3 cut(s)	196, 255, 788
BseMII	CTCAG	3 cut(s)	206, 299, 1047
BseNI	ACTGG	2 cut(s)	389, 623
BseSI	GKGCMC	1 cut(s)	588
BseXI	GCAGC	2 cut(s)	242, 895
BseYI	CCCAGC	1 cut(s)	1221
BsgI	GTGCAG	2 cut(s)	249, 902
BshFI	GGCC	6 cut(s)	152, 431, 675, 687, 983, 1121
BshNI	GGYRCC	1 cut(s)	1105
BsiHKAI	GWGCWC	1 cut(s)	588
BsiHKCI	CYCGRG	1 cut(s)	425
BsiSI	CCGG	3 cut(s)	144, 412, 984
BslFI	GGGAC	1 cut(s)	336
BslI	CCNNNNNNNGG	3 cut(s)	196, 255, 788
BsmAI	GTCTC	1 cut(s)	83
BsmBI	CGTCTC	1 cut(s)	83
BsmFI	GGGAC	1 cut(s)	336
BsnI	GGCC	6 cut(s)	152, 431, 675, 687, 983, 1121
BsoBI	CYCGRG	1 cut(s)	425
Bsp1286I	GDGCHC	3 cut(s)	588, 615, 916
Bsp143I	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
Bsp1720I	GCTNAGC	1 cut(s)	1033
Bsp19I	CCATGG	2 cut(s)	676, 935
BspACI	CCGC	3 cut(s)	644, 917, 1178
BspANI	GGCC	6 cut(s)	152, 431, 675, 687, 983, 1121
BspCNI	CTCAG	3 cut(s)	207, 298, 1046
BspLI	GGNNCC	4 cut(s)	387, 810, 915, 1107
BspMAI	CTGCAG	1 cut(s)	160
BspOI	GCTAGC	1 cut(s)	60
BspPI	GGATC	5 cut(s)	198, 803, 816, 900, 1189
BspT107I	GGYRCC	1 cut(s)	1105
BspTI	CTTAAG	1 cut(s)	958
BsrFI	RCCGGY	2 cut(s)	143, 983
BsrI	ACTGG	2 cut(s)	389, 623
BssAI	RCCGGY	2 cut(s)	143, 983
BssECI	CCNNGG	4 cut(s)	432, 676, 849, 935
BssMI	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
BssT1I	CCWWGG	4 cut(s)	432, 676, 849, 935
Bst4CI	ACNGT	4 cut(s)	581, 702, 979, 1301
Bst6I	CTCTTC	3 cut(s)	30, 164, 475
BstAFI	CTTAAG	1 cut(s)	958
BstBAI	YACGTR	1 cut(s)	706
BstC8I	GCNNGC	4 cut(s)	58, 294, 965, 985
BstDEI	CTNAG	5 cut(s)	215, 285, 1033, 1039, 1057
BstDSI	CCRYGG	2 cut(s)	676, 935
BstF5I	GGATG	4 cut(s)	121, 512, 1202, 1249
BstH2I	RGCGCY	1 cut(s)	167
BstHHI	GCGC	1 cut(s)	166
BstKTI	GATC	8 cut(s)	52, 206, 480, 641, 811, 895, 1056, 1184
BstMAI	GTCTC	1 cut(s)	83
BstMBI	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
BstMWI	GCNNNNNNNGC	6 cut(s)	140, 149, 227, 260, 269, 989
BstNSI	RCATGY	1 cut(s)	944
BstSFI	CTRYAG	1 cut(s)	156
BstSLI	GKGCMC	1 cut(s)	588
BstSNI	TACGTA	1 cut(s)	706
BstV1I	GCAGC	2 cut(s)	242, 895
BstX2I	RGATCY	4 cut(s)	203, 808, 892, 1181
BstXI	CCANNNNNNTGG	1 cut(s)	160
BstYI	RGATCY	4 cut(s)	203, 808, 892, 1181
BsuRI	GGCC	6 cut(s)	152, 431, 675, 687, 983, 1121
BtgI	CCRYGG	2 cut(s)	676, 935
BtgZI	GCGATG	2 cut(s)	110, 1002
BtsCI	GGATG	4 cut(s)	121, 512, 1202, 1249
BtsI	GCAGTG	3 cut(s)	153, 165, 480
BtsIMutI	CAGTG	3 cut(s)	153, 165, 480
Cac8I	GCNNGC	4 cut(s)	58, 294, 965, 985
CaiI	CAGNNNCTG	1 cut(s)	1217
CfoI	GCGC	1 cut(s)	166
Cfr10I	RCCGGY	2 cut(s)	143, 983
Cfr13I	GGNCC	2 cut(s)	395, 853
Csp6I	GTAC	2 cut(s)	703, 833
CviAII	CATG	7 cut(s)	503, 532, 677, 936, 941, 994, 1249
CviQI	GTAC	2 cut(s)	703, 833
DdeI	CTNAG	5 cut(s)	215, 285, 1033, 1039, 1057
DpnI	GATC	8 cut(s)	51, 205, 479, 640, 810, 894, 1055, 1183
DpnII	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
DraIII	CACNNNGTG	1 cut(s)	592
EaeI	YGGCCR	4 cut(s)	150, 685, 981, 1119
Eam1104I	CTCTTC	3 cut(s)	30, 164, 475
EarI	CTCTTC	3 cut(s)	30, 164, 475
Eco105I	TACGTA	1 cut(s)	706
Eco130I	CCWWGG	4 cut(s)	432, 676, 849, 935
Eco147I	AGGCCT	1 cut(s)	431
Eco24I	GRGCYC	2 cut(s)	615, 916
Eco32I	GATATC	1 cut(s)	932
Eco47I	GGWCC	2 cut(s)	395, 853
Eco57I	CTGAAG	3 cut(s)	188, 751, 941
Eco88I	CYCGRG	1 cut(s)	425
EcoO109I	RGGNCCY	1 cut(s)	853
EcoRV	GATATC	1 cut(s)	932
EcoT14I	CCWWGG	4 cut(s)	432, 676, 849, 935
EcoT22I	ATGCAT	1 cut(s)	274
EcoT38I	GRGCYC	2 cut(s)	615, 916
ErhI	CCWWGG	4 cut(s)	432, 676, 849, 935
Esp3I	CGTCTC	1 cut(s)	83
FaeI	CATG	7 cut(s)	506, 535, 680, 939, 944, 997, 1252
FalI	AAGNNNNNCTT	2 cut(s)	1220, 1252
FaqI	GGGAC	1 cut(s)	336
FatI	CATG	7 cut(s)	502, 531, 676, 935, 940, 993, 1248
FauI	CCCGC	1 cut(s)	1171
Fnu4HI	GCNGC	2 cut(s)	231, 884
FokI	GGATG	4 cut(s)	128, 499, 1209, 1256
FriOI	GRGCYC	2 cut(s)	615, 916
Fsp4HI	GCNGC	2 cut(s)	231, 884
FspBI	CTAG	4 cut(s)	57, 366, 872, 1318
GlaI	GCGC	1 cut(s)	165
GluI	GCNGC	2 cut(s)	231, 884
GsaI	CCCAGC	1 cut(s)	1225
GsuI	CTGGAG	1 cut(s)	765
HaeII	RGCGCY	1 cut(s)	167
HaeIII	GGCC	6 cut(s)	152, 431, 675, 687, 983, 1121
HapII	CCGG	3 cut(s)	144, 412, 984
HhaI	GCGC	1 cut(s)	166
Hin1II	CATG	7 cut(s)	506, 535, 680, 939, 944, 997, 1252
Hin6I	GCGC	1 cut(s)	164
HinP1I	GCGC	1 cut(s)	164
HincII	GTYRAC	2 cut(s)	340, 906
HindII	GTYRAC	2 cut(s)	340, 906
HindIII	AAGCTT	1 cut(s)	796
HinfI	GANTC	3 cut(s)	30, 238, 681
HpaII	CCGG	3 cut(s)	144, 412, 984
HphI	GGTGA	3 cut(s)	133, 629, 803
Hpy166II	GTNNAC	6 cut(s)	340, 407, 529, 586, 620, 906
Hpy188I	TCNGA	7 cut(s)	208, 288, 567, 745, 813, 892, 929
Hpy188III	TCNNGA	5 cut(s)	266, 356, 366, 1194, 1237
Hpy8I	GTNNAC	6 cut(s)	340, 407, 529, 586, 620, 906
Hpy99I	CGWCG	1 cut(s)	1127
HpyAV	CCTTC	3 cut(s)	203, 500, 1146
HpyCH4III	ACNGT	4 cut(s)	581, 702, 979, 1301
HpyCH4IV	ACGT	5 cut(s)	705, 753, 876, 902, 1161
HpyCH4V	TGCA	9 cut(s)	158, 230, 272, 586, 774, 883, 997, 1204, 1291
HpyF10VI	GCNNNNNNNGC	6 cut(s)	140, 149, 227, 260, 269, 989
HpyF3I	CTNAG	5 cut(s)	215, 285, 1033, 1039, 1057
HpySE526I	ACGT	5 cut(s)	705, 753, 876, 902, 1161
Hsp92II	CATG	7 cut(s)	506, 535, 680, 939, 944, 997, 1252
HspAI	GCGC	1 cut(s)	164
KroI	GCCGGC	1 cut(s)	983
KroNI	GCCGGC	1 cut(s)	985
Kzo9I	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
LmnI	GCTCC	1 cut(s)	919
Lsp1109I	GCAGC	2 cut(s)	242, 895
LweI	GCATC	3 cut(s)	259, 979, 1036
MaeI	CTAG	4 cut(s)	57, 366, 872, 1318
MaeII	ACGT	5 cut(s)	705, 753, 876, 902, 1161
MaeIII	GTNAC	3 cut(s)	302, 575, 597
MalI	GATC	8 cut(s)	51, 205, 479, 640, 810, 894, 1055, 1183
MboI	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
MboII	GAAGA	6 cut(s)	47, 181, 462, 757, 1055, 1157
MfeI	CAATTG	1 cut(s)	1128
MflI	RGATCY	4 cut(s)	203, 808, 892, 1181
MhlI	GDGCHC	3 cut(s)	588, 615, 916
MlsI	TGGCCA	1 cut(s)	152
MluCI	AATT	9 cut(s)	180, 279, 330, 443, 450, 841, 1128, 1232, 1275
MluNI	TGGCCA	1 cut(s)	152
MlyI	GAGTC	3 cut(s)	39, 232, 675
MmeI	TCCRAC	2 cut(s)	177, 373
MnlI	CCTC	8 cut(s)	78, 106, 376, 421, 678, 799, 866, 1233
Mox20I	TGGCCA	1 cut(s)	152
Mph1103I	ATGCAT	1 cut(s)	274
MroNI	GCCGGC	1 cut(s)	983
MscI	TGGCCA	1 cut(s)	152
MseI	TTAA	2 cut(s)	959, 1086
MslI	CAYNNNNRTG	2 cut(s)	158, 977
Msp20I	TGGCCA	1 cut(s)	152
MspA1I	CMGCKG	2 cut(s)	644, 919
MspCI	CTTAAG	1 cut(s)	958
MspI	CCGG	3 cut(s)	144, 412, 984
MunI	CAATTG	1 cut(s)	1128
MwoI	GCNNNNNNNGC	6 cut(s)	140, 149, 227, 260, 269, 989
NaeI	GCCGGC	1 cut(s)	985
NcoI	CCATGG	2 cut(s)	676, 935
NdeII	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
NgoMIV	GCCGGC	1 cut(s)	983
NheI	GCTAGC	1 cut(s)	56
NlaIII	CATG	7 cut(s)	506, 535, 680, 939, 944, 997, 1252
NlaIV	GGNNCC	4 cut(s)	387, 810, 915, 1107
NmeAIII	GCCGAG	1 cut(s)	663
NmuCI	GTSAC	2 cut(s)	575, 597
NsiI	ATGCAT	1 cut(s)	274
NspI	RCATGY	1 cut(s)	944
OliI	CACNNNNGTG	1 cut(s)	158
PaeR7I	CTCGAG	1 cut(s)	425
PceI	AGGCCT	1 cut(s)	431
PdiI	GCCGGC	1 cut(s)	985
PflMI	CCANNNNNTGG	1 cut(s)	255
PkrI	GCNGC	2 cut(s)	232, 885
PleI	GAGTC	3 cut(s)	38, 232, 675
PpsI	GAGTC	3 cut(s)	38, 232, 675
Ppu21I	YACGTR	1 cut(s)	706
PpuMI	RGGWCCY	1 cut(s)	853
Psp1406I	AACGTT	1 cut(s)	902
Psp5II	RGGWCCY	1 cut(s)	853
PspFI	CCCAGC	1 cut(s)	1221
PspN4I	GGNNCC	4 cut(s)	387, 810, 915, 1107
PspPI	GGNCC	2 cut(s)	395, 853
PspPPI	RGGWCCY	1 cut(s)	853
PspXI	VCTCGAGB	1 cut(s)	425
PstI	CTGCAG	1 cut(s)	160
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	4 cut(s)	203, 808, 892, 1181
RsaI	GTAC	2 cut(s)	704, 834
RsaNI	GTAC	2 cut(s)	703, 833
RseI	CAYNNNNRTG	2 cut(s)	158, 977
SaqAI	TTAA	2 cut(s)	959, 1086
SatI	GCNGC	2 cut(s)	231, 884
Sau3AI	GATC	8 cut(s)	49, 203, 477, 638, 808, 892, 1053, 1181
Sau96I	GGNCC	2 cut(s)	395, 853
ScaI	AGTACT	1 cut(s)	834
SchI	GAGTC	3 cut(s)	39, 232, 675
SduI	GDGCHC	3 cut(s)	588, 615, 916
SfaNI	GCATC	3 cut(s)	259, 979, 1036
SfcI	CTRYAG	1 cut(s)	156
Sfr274I	CTCGAG	1 cut(s)	425
SinI	GGWCC	2 cut(s)	395, 853
SlaI	CTCGAG	1 cut(s)	425
SmiMI	CAYNNNNRTG	2 cut(s)	158, 977
SmlI	CTYRAG	5 cut(s)	425, 669, 836, 958, 1237
SmoI	CTYRAG	5 cut(s)	425, 669, 836, 958, 1237
SnaBI	TACGTA	1 cut(s)	706
Sse9I	AATT	9 cut(s)	180, 279, 330, 443, 450, 841, 1128, 1232, 1275
SseBI	AGGCCT	1 cut(s)	431
SsiI	CCGC	3 cut(s)	644, 917, 1178
SspMI	CTAG	4 cut(s)	57, 366, 872, 1318
StuI	AGGCCT	1 cut(s)	431
StyI	CCWWGG	4 cut(s)	432, 676, 849, 935
TaaI	ACNGT	4 cut(s)	581, 702, 979, 1301
TaiI	ACGT	5 cut(s)	708, 756, 879, 905, 1164
TaqI	TCGA	6 cut(s)	28, 33, 52, 426, 637, 697
TaqII	GACCGA	1 cut(s)	412
TasI	AATT	9 cut(s)	180, 279, 330, 443, 450, 841, 1128, 1232, 1275
TatI	WGTACW	1 cut(s)	832
Tru1I	TTAA	2 cut(s)	959, 1086
Tru9I	TTAA	2 cut(s)	959, 1086
TscAI	CASTG	3 cut(s)	160, 165, 487
TseFI	GTSAC	2 cut(s)	575, 597
TseI	GCWGC	2 cut(s)	230, 883
Tsp45I	GTSAC	2 cut(s)	575, 597
TspDTI	ATGAA	4 cut(s)	443, 456, 501, 519
TspGWI	ACGGA	1 cut(s)	452
TspRI	CASTG	3 cut(s)	160, 165, 487
Van91I	CCANNNNNTGG	1 cut(s)	255
Vha464I	CTTAAG	1 cut(s)	958
VneI	GTGCAC	1 cut(s)	584
VpaK11BI	GGWCC	2 cut(s)	395, 853
XapI	RAATTY	2 cut(s)	279, 1232
XbaI	TCTAGA	1 cut(s)	365
XceI	RCATGY	1 cut(s)	944
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XhoI	CTCGAG	1 cut(s)	425
XspI	CTAG	4 cut(s)	57, 366, 872, 1318
ZrmI	AGTACT	1 cut(s)	834
Zsp2I	ATGCAT	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.