Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Reverse (-)

21601586 .. 21606480

Gene Structure 4895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0223100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGCCACCTTCATTGAGGGTATGGCCAAAAGTGATGGCTTGAAAGGGGTGGCAGAGAAGCTTGAACACGAATCTGCCCCTGATGTCAAATTCAACTCTGTTGCACCACTTCCCTTGGGTGACGAAACTTCACACAATTTTTGTTCTAATAAAAGCATGGAGGGAGCCATTAAAACGCAAGTGAATCATGCTTGTGTTCCTAGTGCTCCCCCATTGTTACTCGAATCTTCTTTGGAGATTAATGAACATGTTGTGGAGCAAAGTCCAAGTCGTGGTGCACATGAAACAACTCACACACCAAGTTTGACTGCTCCCCTAAACACTAGTGTTTCAAGAACAGAAATAAGTGTCTATTCAGGCAGTGGTACAGAGATCGATACTAATGAAATTTCTCAGTCACCCAAATTTCCAATCAGGACTCATGGTGGTGTGGAAGTAAATGCACATCCAGTTCCTTCACTGGTTCACCTGTCAGTATGTAATGCAAGAGAGCAGGGTACATGGGGTGCTGTAATTTCTTATGAAGCATGTGTTAGGCTCTGCCTTCATGCATGGGCTAACCACTATTCCACTGAAGTTCACTGTTTCCTTGAGAATGAATGTGCACTGTTGCGTGAGGCATTTGGTCTACAGAATGTATTATTACAATCAGAAGCTGAACTTTTGGCAAAAGGGTCTTCAAAGCTCTCAAGTGAGTCAGCTGCTCCAAATCCTGTGAAAACTTCTGGCAAAATAAAATTGCTAGTTCGTAAAGTAATAATGGGTTTGGATGAACCACCTGCCAGCTGCAGTTTTTCATCTCTAAAAGAACCAAAGATTAACAAAGACTCAATTGGTAGACACATCTCCAATTTAAGGTCCAGTTTATATCCCTGGTTAAAATCTGTATGGAAGAATTATTTACCACCACGTGCCCCTGCAAAATGTTCCTGCCGTCAGAGTTTGGATTATGTACAGACTAGAGCTAAACGTATTAAAAAGGTACCCTGGCTCCTTAAAGATGCGAGAAGTACTTTGTGCAATCCATCCTCATCATCACATGAAACATATTCTTGCTTCTTGAGATTGAGAAGCTCACCTGAAGAGGATGCAGTCCGAATGCAACCAGGATCCAGCGAAGCCCATTTCTTTTTTCCAGATAGCCTTGGTGATGATTTAATCATAGCAGTTCAAGATTCAAAAGGAAAGCATTGTGGTCATGCCCGAGCTCAAGTGTCTGCCATAGCTGATAAGCCAGGTGACAAGTTACGATGGTGTCCTATATATACCGATCTAGAGCTTGAACCTGTTGGCAGAATTCAGTTGTGCATGGAGTATTCCACAAATCCAGATGAAAATCATCATCTTAAGTTTGGCTCCATTGCAGAAACTGCAGCATATGACTATGTCTTCGTAGCTGCAATCAAATTTCAACATTTTCAGCAAAGAAGCTTCTTGATAGATGGCTCTTGGAATTGGTTACTGACTGAATTCGCATCTTACTTTGGAGTATCAGAGGCATACACAAAATTAAGACACCTTTCCTACATTATGGATGTGGCAACACCGACCGAAGACTGTCTGACCATAGTACATGATATGCTATCGGAGATATTGATGATGAAGGGAAAGAGCACAAATCAGCTTAGTCCATTGGAGAACCACATGCTGGTGAAGATTTTGGATCAAGTAAACCAGATTCTTGCTTTGGTTTTCGAGAATTACAAGTCACTTGAAGAAGATTCGCCGTCAGGGATGATGAATGTTTCTAAACCTGCCAGTGGATTGGCAGCACCATCTTTGGGACCTGCATTCCAGCTATACTCCCTTCTGCATGATGTGTTGAGTCCCGAGGTACAAATGAAACTCTGCAGATATTTTCGGGTTGCTGCAAAGAAGAGGTTAAGAGTGCACTTCATGGAGACAGATAACCTCATTCTAAGCAGCAATGAGGGAACACAGAAGGATCCAGTCACTTCTTATCAGAGGATGAATTCTCTGGTCTCGAGTATCAGAAATGAAATTCTTACTGACATAAGCATCCAGAACCAGAACATCCTCCCAAGTTTTGTAGACCTTCCAAATATTTCTTCATCCATATATAACGTTGAGCTCTGCAGTAGATTGCGTGCTTTCCTTGTTGCATGTCCTCCTCCAGGCTTATCACCTCCGGTTGCAGAACTTATTATTGCAACAGCCGAATTTCAAAAGGATCTTTCCTTGTGGAACATCGATCCTGTAGTCGATGGAGTTAATGCTAAAGAATTGTTTCACTCGCATATAGTTTCATGGATTCGAAACAAGCATTGTACTTTGCTTGACAGGTGCAAACTAGATAAGGAAAACTGGTCTGGTAAAGAAAAACAGAATGAAACAACTCCTTTTATTCATGCTATTTACAACCAGCTGATGGAGACGCTCCATGAATATGAGATCATCAGTTCTCACTTGCCGATGTATACAGCTGCTTTGGAGAATGCTATTGCAGATGTTGAGAAGGCAGTTGCTAAAACTCTGGAAAAACGCTATGCTAATGTTTTATCCCCACTGAAAGACAATCTGAGAAACAAAATACTAGGCAATAAGTATGTCAAAAAATTATCCAGTCAAACCATTGAGACTTATTATGTCCCAGCCGAGGTAACTTTGTTTTTTGGATTTGAATGGTTACATGAAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

886

Amino Acids

98.9

Weight (kDa)

6.26

Isoelectric Point (pI)

50.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	787
Acc36I	ACCTGC	3 cut(s)	787, 1762, 1795
Acc65I	GGTACC	1 cut(s)	982
AccB1I	GGYRCC	1 cut(s)	982
AccB7I	CCANNNNNTGG	3 cut(s)	272, 1648, 2389
AccI	GTMKAC	4 cut(s)	628, 838, 2052, 2438
AclI	AACGTT	1 cut(s)	2085
AclWI	GGATC	7 cut(s)	1104, 1117, 1671, 1940, 1953, 2199, 2207
AcoI	YGGCCR	2 cut(s)	3, 24
AcsI	RAATTY	9 cut(s)	89, 387, 404, 1296, 1406, 1469, 1972, 2001, 2180
AcuI	CTGAAG	2 cut(s)	594, 1101
AcvI	CACGTG	1 cut(s)	911
AdeI	CACNNNGTG	1 cut(s)	911
AfaI	GTAC	8 cut(s)	367, 499, 954, 984, 1012, 1572, 1836, 2290
AfiI	CCNNNNNNNGG	8 cut(s)	272, 855, 1648, 1760, 1781, 2135, 2389, 2617
AflII	CTTAAG	1 cut(s)	1346
AflIII	ACRYGT	1 cut(s)	247
AhlI	ACTAGT	1 cut(s)	323
AjnI	CCWGG	5 cut(s)	872, 986, 1105, 1234, 2134
AjuI	GAANNNNNNNTTGG	2 cut(s)	2053, 2085
Alw21I	GWGCWC	7 cut(s)	208, 280, 607, 1210, 1616, 1893, 2094
Alw26I	GTCTC	4 cut(s)	1895, 1987, 2387, 2591
Alw44I	GTGCAC	3 cut(s)	276, 603, 1889
AlwI	GGATC	7 cut(s)	1104, 1117, 1671, 1940, 1953, 2199, 2207
AlwNI	CAGNNNCTG	2 cut(s)	656, 1370
Ama87I	CYCGRG	3 cut(s)	1203, 1829, 1984
AoxI	GGCC	2 cut(s)	3, 24
ApaLI	GTGCAC	3 cut(s)	276, 603, 1889
ApeKI	GCWGC	8 cut(s)	701, 786, 1373, 1397, 1769, 1868, 1923, 2444
ApoI	RAATTY	9 cut(s)	89, 387, 404, 1296, 1406, 1469, 1972, 2001, 2180
ArsI	GACNNNNNNTTYG	4 cut(s)	253, 285, 1373, 1405
AseI	ATTAAT	1 cut(s)	240
Asp700I	GAANNNNTTC	1 cut(s)	2247
Asp718I	GGTACC	1 cut(s)	982
AspS9I	GGNCC	2 cut(s)	858, 1784
AsuHPI	GGTGA	8 cut(s)	131, 390, 458, 1068, 1160, 1250, 1663, 2136
AsuII	TTCGAA	1 cut(s)	2275
AvaI	CYCGRG	3 cut(s)	1203, 1829, 1984
AvaII	GGWCC	2 cut(s)	858, 1784
BaeGI	GKGCMC	4 cut(s)	280, 607, 916, 1893
BalI	TGGCCA	2 cut(s)	5, 26
BamHI	GGATCC	2 cut(s)	1109, 1945
BanI	GGYRCC	1 cut(s)	982
BanII	GRGCYC	2 cut(s)	1210, 2094
BbrPI	CACGTG	1 cut(s)	911
BbsI	GAAGAC	3 cut(s)	669, 1381, 1560
Bbv12I	GWGCWC	7 cut(s)	208, 280, 607, 1210, 1616, 1893, 2094
BbvI	GCAGC	8 cut(s)	688, 773, 1384, 1385, 1781, 1855, 1935, 2431
BccI	CCATC	7 cut(s)	29, 1033, 1245, 1436, 1783, 2219, 2383
BceAI	ACGGC	2 cut(s)	918, 1711
BciT130I	CCWGG	5 cut(s)	874, 988, 1107, 1236, 2136
BcoDI	GTCTC	4 cut(s)	1895, 1987, 2387, 2591
BcuI	ACTAGT	1 cut(s)	323
BfaI	CTAG	7 cut(s)	201, 324, 743, 960, 1274, 2312, 2555
BfmI	CTRYAG	6 cut(s)	629, 787, 1371, 1849, 2095, 2217
BfrI	CTTAAG	1 cut(s)	1346
BfuAI	ACCTGC	3 cut(s)	787, 1762, 1795
BisI	GCNGC	8 cut(s)	702, 787, 1374, 1398, 1770, 1869, 1924, 2445
BlsI	GCNGC	8 cut(s)	703, 788, 1375, 1399, 1771, 1870, 1925, 2446
BmcAI	AGTACT	1 cut(s)	1012
Bme1390I	CCNGG	5 cut(s)	874, 988, 1107, 1236, 2136
Bme18I	GGWCC	2 cut(s)	858, 1784
BmeT110I	CYCGRG	3 cut(s)	1203, 1829, 1984
BmgT120I	GGNCC	2 cut(s)	858, 1784
BmiI	GGNNCC	7 cut(s)	166, 984, 992, 1111, 1357, 1785, 1947
BmrFI	CCNGG	5 cut(s)	874, 988, 1107, 1236, 2136
BmsI	GCATC	4 cut(s)	991, 1078, 1484, 2028
BpiI	GAAGAC	3 cut(s)	669, 1381, 1560
BpmI	CTGGAG	1 cut(s)	2118
Bpu14I	TTCGAA	1 cut(s)	2275
BpuEI	CTTGAG	4 cut(s)	611, 673, 1081, 1194
Bsa29I	ATCGAT	2 cut(s)	375, 2211
BsaAI	YACGTR	1 cut(s)	911
BsaBI	GATNNNNATC	1 cut(s)	1335
BsaI	GGTCTC	1 cut(s)	1987
BsaJI	CCNNGG	6 cut(s)	114, 872, 986, 1144, 1830, 2616
BsaWI	WCCGGW	1 cut(s)	2149
BsaXI	ACNNNNNCTCC	2 cut(s)	975, 1005
Bsc4I	CCNNNNNNNGG	8 cut(s)	272, 855, 1648, 1760, 1781, 2135, 2389, 2617
Bse1I	ACTGG	7 cut(s)	449, 465, 861, 1758, 1949, 2330, 2583
Bse3DI	GCAATG	2 cut(s)	1359, 1933
Bse8I	GATNNNNATC	1 cut(s)	1335
BseBI	CCWGG	5 cut(s)	874, 988, 1107, 1236, 2136
BseCI	ATCGAT	2 cut(s)	375, 2211
BseDI	CCNNGG	6 cut(s)	114, 872, 986, 1144, 1830, 2616
BseJI	GATNNNNATC	1 cut(s)	1335
BseLI	CCNNNNNNNGG	8 cut(s)	272, 855, 1648, 1760, 1781, 2135, 2389, 2617
BseMI	GCAATG	2 cut(s)	1359, 1933
BseMII	CTCAG	2 cut(s)	407, 2531
BseNI	ACTGG	7 cut(s)	449, 465, 861, 1758, 1949, 2330, 2583
BseRI	GAGGAG	1 cut(s)	2121
BseSI	GKGCMC	4 cut(s)	280, 607, 916, 1893
BseXI	GCAGC	8 cut(s)	688, 773, 1384, 1385, 1781, 1855, 1935, 2431
BseYI	CCCAGC	1 cut(s)	2611
Bsh1285I	CGRYCG	1 cut(s)	1551
BshFI	GGCC	2 cut(s)	5, 26
BshNI	GGYRCC	1 cut(s)	982
BshVI	ATCGAT	2 cut(s)	375, 2211
BsiEI	CGRYCG	1 cut(s)	1551
BsiHKAI	GWGCWC	7 cut(s)	208, 280, 607, 1210, 1616, 1893, 2094
BsiHKCI	CYCGRG	3 cut(s)	1203, 1829, 1984
BsiSI	CCGG	1 cut(s)	2150
BslFI	GGGAC	3 cut(s)	1797, 1812, 2594
BslI	CCNNNNNNNGG	8 cut(s)	272, 855, 1648, 1760, 1781, 2135, 2389, 2617
BsmAI	GTCTC	4 cut(s)	1895, 1987, 2387, 2591
BsmBI	CGTCTC	1 cut(s)	2387
BsmFI	GGGAC	3 cut(s)	1797, 1812, 2594
BsmI	GAATGC	3 cut(s)	1104, 1790, 2461
BsnI	GGCC	2 cut(s)	5, 26
Bso31I	GGTCTC	1 cut(s)	1987
BsoBI	CYCGRG	3 cut(s)	1203, 1829, 1984
Bsp119I	TTCGAA	1 cut(s)	2275
Bsp1286I	GDGCHC	8 cut(s)	208, 280, 607, 916, 1210, 1616, 1893, 2094
Bsp1407I	TGTACA	1 cut(s)	952
Bsp143I	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
BspANI	GGCC	2 cut(s)	5, 26
BspCNI	CTCAG	2 cut(s)	406, 2532
BspDI	ATCGAT	2 cut(s)	375, 2211
BspLI	GGNNCC	7 cut(s)	166, 984, 992, 1111, 1357, 1785, 1947
BspMAI	CTGCAG	4 cut(s)	791, 1375, 1853, 2099
BspMI	ACCTGC	3 cut(s)	787, 1762, 1795
BspPI	GGATC	7 cut(s)	1104, 1117, 1671, 1940, 1953, 2199, 2207
BspT104I	TTCGAA	1 cut(s)	2275
BspT107I	GGYRCC	1 cut(s)	982
BspTI	CTTAAG	1 cut(s)	1346
BspTNI	GGTCTC	1 cut(s)	1987
BsrDI	GCAATG	2 cut(s)	1359, 1933
BsrGI	TGTACA	1 cut(s)	952
BsrI	ACTGG	7 cut(s)	449, 465, 861, 1758, 1949, 2330, 2583
BssECI	CCNNGG	6 cut(s)	114, 872, 986, 1144, 1830, 2616
BssMI	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
BssNAI	GTATAC	1 cut(s)	2439
BssT1I	CCWWGG	2 cut(s)	114, 1144
Bst1107I	GTATAC	1 cut(s)	2439
Bst2UI	CCWGG	5 cut(s)	874, 988, 1107, 1236, 2136
Bst4CI	ACNGT	3 cut(s)	584, 609, 1559
Bst6I	CTCTTC	2 cut(s)	1077, 1871
BstAFI	CTTAAG	1 cut(s)	1346
BstAPI	GCANNNNNTGC	1 cut(s)	1370
BstAUI	TGTACA	1 cut(s)	952
BstBAI	YACGTR	1 cut(s)	911
BstBI	TTCGAA	1 cut(s)	2275
BstC8I	GCNNGC	2 cut(s)	784, 2109
BstDEI	CTNAG	4 cut(s)	393, 1625, 1919, 2540
BstENI	CCTNNNNNAGG	1 cut(s)	2133
BstKTI	GATC	8 cut(s)	375, 1112, 1273, 1666, 1948, 2194, 2215, 2415
BstMAI	GTCTC	4 cut(s)	1895, 1987, 2387, 2591
BstMBI	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
BstMCI	CGRYCG	1 cut(s)	1551
BstMWI	GCNNNNNNNGC	1 cut(s)	1370
BstNI	CCWGG	5 cut(s)	874, 988, 1107, 1236, 2136
BstNSI	RCATGY	4 cut(s)	251, 531, 1648, 2127
BstSCI	CCNGG	5 cut(s)	872, 986, 1105, 1234, 2134
BstSFI	CTRYAG	6 cut(s)	629, 787, 1371, 1849, 2095, 2217
BstSLI	GKGCMC	4 cut(s)	280, 607, 916, 1893
BstV1I	GCAGC	8 cut(s)	688, 773, 1384, 1385, 1781, 1855, 1935, 2431
BstV2I	GAAGAC	3 cut(s)	669, 1381, 1560
BstX2I	RGATCY	3 cut(s)	1109, 1945, 2191
BstXI	CCANNNNNNTGG	1 cut(s)	1765
BstYI	RGATCY	3 cut(s)	1109, 1945, 2191
BstZ17I	GTATAC	1 cut(s)	2439
Bsu15I	ATCGAT	2 cut(s)	375, 2211
BsuRI	GGCC	2 cut(s)	5, 26
BsuTUI	ATCGAT	2 cut(s)	375, 2211
BtsI	GCAGTG	1 cut(s)	367
BtsIMutI	CAGTG	7 cut(s)	367, 458, 570, 580, 605, 1765, 2525
BveI	ACCTGC	3 cut(s)	787, 1762, 1795
Cac8I	GCNNGC	2 cut(s)	784, 2109
CaiI	CAGNNNCTG	2 cut(s)	656, 1370
Cfr13I	GGNCC	2 cut(s)	858, 1784
ClaI	ATCGAT	2 cut(s)	375, 2211
CseI	GACGC	1 cut(s)	2404
Csp6I	GTAC	8 cut(s)	366, 498, 953, 983, 1011, 1571, 1835, 2289
CspCI	CAANNNNNGTGG	3 cut(s)	30, 96, 131
CviQI	GTAC	8 cut(s)	366, 498, 953, 983, 1011, 1571, 1835, 2289
DdeI	CTNAG	4 cut(s)	393, 1625, 1919, 2540
DpnI	GATC	8 cut(s)	374, 1111, 1272, 1665, 1947, 2193, 2214, 2414
DpnII	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
DraIII	CACNNNGTG	1 cut(s)	911
EaeI	YGGCCR	2 cut(s)	3, 24
Eam1104I	CTCTTC	2 cut(s)	1077, 1871
EarI	CTCTTC	2 cut(s)	1077, 1871
Ecl136II	GAGCTC	2 cut(s)	1208, 2092
Eco130I	CCWWGG	2 cut(s)	114, 1144
Eco24I	GRGCYC	2 cut(s)	1210, 2094
Eco31I	GGTCTC	1 cut(s)	1987
Eco47I	GGWCC	2 cut(s)	858, 1784
Eco53kI	GAGCTC	2 cut(s)	1208, 2092
Eco57I	CTGAAG	2 cut(s)	594, 1101
Eco72I	CACGTG	1 cut(s)	911
Eco88I	CYCGRG	3 cut(s)	1203, 1829, 1984
EcoICRI	GAGCTC	2 cut(s)	1208, 2092
EcoNI	CCTNNNNNAGG	1 cut(s)	2133
EcoO109I	RGGNCCY	1 cut(s)	1784
EcoRI	GAATTC	3 cut(s)	1296, 1469, 1972
EcoRII	CCWGG	5 cut(s)	872, 986, 1105, 1234, 2134
EcoT14I	CCWWGG	2 cut(s)	114, 1144
EcoT22I	ATGCAT	1 cut(s)	553
EcoT38I	GRGCYC	2 cut(s)	1210, 2094
ErhI	CCWWGG	2 cut(s)	114, 1144
Esp3I	CGTCTC	1 cut(s)	2387
FalI	AAGNNNNNCTT	2 cut(s)	645, 677
FaqI	GGGAC	3 cut(s)	1797, 1812, 2594
FauNDI	CATATG	1 cut(s)	1378
FblI	GTMKAC	4 cut(s)	628, 838, 2052, 2438
Fnu4HI	GCNGC	8 cut(s)	702, 787, 1374, 1398, 1770, 1869, 1924, 2445
FriOI	GRGCYC	2 cut(s)	1210, 2094
Fsp4HI	GCNGC	8 cut(s)	702, 787, 1374, 1398, 1770, 1869, 1924, 2445
FspBI	CTAG	7 cut(s)	201, 324, 743, 960, 1274, 2312, 2555
GluI	GCNGC	8 cut(s)	702, 787, 1374, 1398, 1770, 1869, 1924, 2445
GsaI	CCCAGC	1 cut(s)	2615
GsuI	CTGGAG	1 cut(s)	2118
HaeIII	GGCC	2 cut(s)	5, 26
HapII	CCGG	1 cut(s)	2150
HgaI	GACGC	1 cut(s)	2404
HindIII	AAGCTT	2 cut(s)	59, 1429
HpaII	CCGG	1 cut(s)	2150
HphI	GGTGA	8 cut(s)	131, 390, 458, 1068, 1160, 1250, 1663, 2136
HpyAV	CCTTC	8 cut(s)	19, 465, 554, 1597, 1817, 1936, 2066, 2470
HpyCH4III	ACNGT	3 cut(s)	584, 609, 1559
HpyCH4IV	ACGT	3 cut(s)	910, 970, 2085
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1370
HpyF3I	CTNAG	4 cut(s)	393, 1625, 1919, 2540
HpySE526I	ACGT	3 cut(s)	910, 970, 2085
KpnI	GGTACC	1 cut(s)	986
Kzo9I	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
LmnI	GCTCC	8 cut(s)	164, 211, 256, 316, 709, 996, 1361, 2403
Lsp1109I	GCAGC	8 cut(s)	688, 773, 1384, 1385, 1781, 1855, 1935, 2431
LweI	GCATC	4 cut(s)	991, 1078, 1484, 2028
MaeI	CTAG	7 cut(s)	201, 324, 743, 960, 1274, 2312, 2555
MaeII	ACGT	3 cut(s)	910, 970, 2085
MalI	GATC	8 cut(s)	374, 1111, 1272, 1665, 1947, 2193, 2214, 2414
MboI	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
MfeI	CAATTG	1 cut(s)	831
MflI	RGATCY	3 cut(s)	1109, 1945, 2191
MhlI	GDGCHC	8 cut(s)	208, 280, 607, 916, 1210, 1616, 1893, 2094
MlsI	TGGCCA	2 cut(s)	5, 26
MluNI	TGGCCA	2 cut(s)	5, 26
MlyI	GAGTC	4 cut(s)	412, 704, 821, 1834
Mox20I	TGGCCA	2 cut(s)	5, 26
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	1 cut(s)	2247
MscI	TGGCCA	2 cut(s)	5, 26
MslI	CAYNNNNRTG	4 cut(s)	192, 426, 1649, 2406
Msp20I	TGGCCA	2 cut(s)	5, 26
MspA1I	CMGCKG	4 cut(s)	701, 786, 2386, 2444
MspCI	CTTAAG	1 cut(s)	1346
MspI	CCGG	1 cut(s)	2150
MspR9I	CCNGG	5 cut(s)	874, 988, 1107, 1236, 2136
MunI	CAATTG	1 cut(s)	831
Mva1269I	GAATGC	3 cut(s)	1104, 1790, 2461
MvaI	CCWGG	5 cut(s)	874, 988, 1107, 1236, 2136
MwoI	GCNNNNNNNGC	1 cut(s)	1370
NdeI	CATATG	1 cut(s)	1378
NdeII	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
NlaIV	GGNNCC	7 cut(s)	166, 984, 992, 1111, 1357, 1785, 1947
NmeAIII	GCCGAG	1 cut(s)	2641
NmuCI	GTSAC	5 cut(s)	119, 396, 1238, 1707, 1951
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	4 cut(s)	251, 531, 1648, 2127
NspV	TTCGAA	1 cut(s)	2275
PaeR7I	CTCGAG	1 cut(s)	1984
PaqCI	CACCTGC	1 cut(s)	787
PciI	ACATGT	1 cut(s)	247
PctI	GAATGC	3 cut(s)	1104, 1790, 2461
PdmI	GAANNNNTTC	1 cut(s)	2247
PfeI	GAWTC	7 cut(s)	71, 184, 224, 1175, 1678, 1721, 2272
PflFI	GACNNNGTC	1 cut(s)	1385
PflMI	CCANNNNNTGG	3 cut(s)	272, 1648, 2389
PkrI	GCNGC	8 cut(s)	703, 788, 1375, 1399, 1771, 1870, 1925, 2446
PleI	GAGTC	4 cut(s)	412, 703, 821, 1833
PmaCI	CACGTG	1 cut(s)	911
PmlI	CACGTG	1 cut(s)	911
PpsI	GAGTC	4 cut(s)	412, 703, 821, 1833
Ppu21I	YACGTR	1 cut(s)	911
PpuMI	RGGWCCY	1 cut(s)	1784
PscI	ACATGT	1 cut(s)	247
PshBI	ATTAAT	1 cut(s)	240
Psp124BI	GAGCTC	2 cut(s)	1210, 2094
Psp1406I	AACGTT	1 cut(s)	2085
Psp5II	RGGWCCY	1 cut(s)	1784
Psp6I	CCWGG	5 cut(s)	872, 986, 1105, 1234, 2134
PspCI	CACGTG	1 cut(s)	911
PspFI	CCCAGC	1 cut(s)	2611
PspGI	CCWGG	5 cut(s)	872, 986, 1105, 1234, 2134
PspN4I	GGNNCC	7 cut(s)	166, 984, 992, 1111, 1357, 1785, 1947
PspPI	GGNCC	2 cut(s)	858, 1784
PspPPI	RGGWCCY	1 cut(s)	1784
PstI	CTGCAG	4 cut(s)	791, 1375, 1853, 2099
PstNI	CAGNNNCTG	2 cut(s)	656, 1370
PsuI	RGATCY	3 cut(s)	1109, 1945, 2191
PsyI	GACNNNGTC	1 cut(s)	1385
PvuII	CAGCTG	4 cut(s)	701, 786, 2386, 2444
RsaI	GTAC	8 cut(s)	367, 499, 954, 984, 1012, 1572, 1836, 2290
RsaNI	GTAC	8 cut(s)	366, 498, 953, 983, 1011, 1571, 1835, 2289
RseI	CAYNNNNRTG	4 cut(s)	192, 426, 1649, 2406
SacI	GAGCTC	2 cut(s)	1210, 2094
SatI	GCNGC	8 cut(s)	702, 787, 1374, 1398, 1770, 1869, 1924, 2445
Sau3AI	GATC	8 cut(s)	372, 1109, 1270, 1663, 1945, 2191, 2212, 2412
Sau96I	GGNCC	2 cut(s)	858, 1784
ScaI	AGTACT	1 cut(s)	1012
SchI	GAGTC	4 cut(s)	412, 704, 821, 1834
ScrFI	CCNGG	5 cut(s)	874, 988, 1107, 1236, 2136
SduI	GDGCHC	8 cut(s)	208, 280, 607, 916, 1210, 1616, 1893, 2094
SfaNI	GCATC	4 cut(s)	991, 1078, 1484, 2028
SfcI	CTRYAG	6 cut(s)	629, 787, 1371, 1849, 2095, 2217
Sfr274I	CTCGAG	1 cut(s)	1984
SfuI	TTCGAA	1 cut(s)	2275
SinI	GGWCC	2 cut(s)	858, 1784
SlaI	CTCGAG	1 cut(s)	1984
SmiMI	CAYNNNNRTG	4 cut(s)	192, 426, 1649, 2406
SmlI	CTYRAG	6 cut(s)	590, 688, 1060, 1209, 1346, 1984
SmoI	CTYRAG	6 cut(s)	590, 688, 1060, 1209, 1346, 1984
SpeI	ACTAGT	1 cut(s)	323
SspI	AATATT	1 cut(s)	2065
SspMI	CTAG	7 cut(s)	201, 324, 743, 960, 1274, 2312, 2555
SstI	GAGCTC	2 cut(s)	1210, 2094
StyD4I	CCNGG	5 cut(s)	872, 986, 1105, 1234, 2134
StyI	CCWWGG	2 cut(s)	114, 1144
TaaI	ACNGT	3 cut(s)	584, 609, 1559
TaiI	ACGT	3 cut(s)	913, 973, 2088
TaqI	TCGA	7 cut(s)	222, 375, 1695, 1985, 2211, 2223, 2275
TaqII	GACCGA	1 cut(s)	1565
TatI	WGTACW	4 cut(s)	952, 1010, 1570, 2288
TfiI	GAWTC	7 cut(s)	71, 184, 224, 1175, 1678, 1721, 2272
TscAI	CASTG	7 cut(s)	367, 465, 577, 587, 612, 1765, 2532
TseFI	GTSAC	5 cut(s)	119, 396, 1238, 1707, 1951
TseI	GCWGC	8 cut(s)	701, 786, 1373, 1397, 1769, 1868, 1923, 2444
Tsp45I	GTSAC	5 cut(s)	119, 396, 1238, 1707, 1951
TspRI	CASTG	7 cut(s)	367, 465, 577, 587, 612, 1765, 2532
Tth111I	GACNNNGTC	1 cut(s)	1385
Van91I	CCANNNNNTGG	3 cut(s)	272, 1648, 2389
Vha464I	CTTAAG	1 cut(s)	1346
VneI	GTGCAC	3 cut(s)	276, 603, 1889
VpaK11BI	GGWCC	2 cut(s)	858, 1784
VspI	ATTAAT	1 cut(s)	240
XagI	CCTNNNNNAGG	1 cut(s)	2133
XapI	RAATTY	9 cut(s)	89, 387, 404, 1296, 1406, 1469, 1972, 2001, 2180
XbaI	TCTAGA	1 cut(s)	1273
XceI	RCATGY	4 cut(s)	251, 531, 1648, 2127
XhoI	CTCGAG	1 cut(s)	1984
XmiI	GTMKAC	4 cut(s)	628, 838, 2052, 2438
XmnI	GAANNNNTTC	1 cut(s)	2247
XspI	CTAG	7 cut(s)	201, 324, 743, 960, 1274, 2312, 2555
ZrmI	AGTACT	1 cut(s)	1012
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.