Prupe.6G171100_v2.0.a1

Prolamin-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
17603077 .. 17603460
384 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G171100.1

Sequence Viewer

Length: 384 bp
ATGGCAAGGTTCACTGGTTATCAAACTTCTGCAATATTGATTTTTGTGATTGCAATGACGATTTTGCCAGGACTTGCAACCCTAGCACACTCCCCATCAAATTTTATGTTCTTAGAGGAATGCAAATCAAGGCTTCATGCTAGGTGTGGAAAAGAAATATTCATTACAATAATTAAGGAATGGTCTATTAGTGATAGGTGTTGCATGGAGTTTGTAGCAATGGGTCAATCATGCCATTTTGCATTAGTGAACAAAGCTCTTTCGAGCCCTCTTTTCAAATTAAACAAGTTGGATGCTTTGACCAAGAGTTCAGAAATTTGGAATCAATGTTTTGAGCTTTCACAATTTCTATCTCCTGCAACTTCTCCTTCTTCAGAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.2

Weight (kDa)

6.81

Isoelectric Point (pI)

60.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000266)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45215 AT1G45221 AT1G45223 AT1G57760 AT1G57775 AT1G57777 AT3G30383 AT3G30385 AT3G30387 AT3G44115 AT4G07515 AT4G08025 AT5G34881 AT5G34882 AT5G34883 AT5G34885 AT5G34887 AT5G34905 AT5G34908 AT5G42567 AT5G42955 AT5G42957
prunus_persica Prupe.2G072700_v2.0.a1 Prupe.2G086700_v2.0.a1 Prupe.2G086800_v2.0.a1 Prupe.2G086900_v2.0.a1 Prupe.2G101000_v2.0.a1 Prupe.4G143200_v2.0.a1 Prupe.6G084400_v2.0.a1 Prupe.6G170500_v2.0.a1 Prupe.6G170600_v2.0.a1 Prupe.6G170700_v2.0.a1 Prupe.6G170800_v2.0.a1 Prupe.6G171000_v2.0.a1 Prupe.6G171100_v2.0.a1 Prupe.6G171200_v2.0.a1 Prupe.6G171300_v2.0.a1 Prupe.6G171400_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0046951 RchiOBHm_Chr5g0046961 RchiOBHm_Chr5g0046971 RchiOBHm_Chr5g0051281 RchiOBHm_Chr5g0051291 RchiOBHm_Chr5g0051301 RchiOBHm_Chr5g0051311 RchiOBHm_Chr5g0051321 RchiOBHm_Chr5g0051331 RchiOBHm_Chr5g0051341 RchiOBHm_Chr5g0051391 RchiOBHm_Chr5g0051401 RchiOBHm_Chr5g0051411 RchiOBHm_Chr5g0051421 RchiOBHm_Chr5g0053111 RchiOBHm_Chr5g0053121 RchiOBHm_Chr5g0053141 RchiOBHm_Chr5g0053151 RchiOBHm_Chr5g0053161 RchiOBHm_Chr5g0053171 RchiOBHm_Chr5g0053181 RchiOBHm_Chr5g0053191 RchiOBHm_Chr5g0053201 RchiOBHm_Chr5g0053211 RchiOBHm_Chr5g0053221 RchiOBHm_Chr5g0053231 RchiOBHm_Chr5g0053241 RchiOBHm_Chr5g0053251 RchiOBHm_Chr5g0053271 RchiOBHm_Chr5g0053391 RchiOBHm_Chr5g0053401 RchiOBHm_Chr5g0053411 RchiOBHm_Chr5g0069271 RchiOBHm_Chr5g0069281 RchiOBHm_Chr5g0069291 RchiOBHm_Chr5g0069301
rosa_multiflora Rmu_sc0000684.1_g000009 Rmu_sc0001966.1_g000053
rosa_roxburghii Rroxscaffold_1G00000190 Rroxscaffold_1G00000200 Rroxscaffold_1G00000210 Rroxscaffold_1G00000220 Rroxscaffold_1G00028850 Rroxscaffold_1G00028890 Rroxscaffold_1G00028910 Rroxscaffold_5G00356310 Rroxscaffold_6G00392770 Rroxscaffold_7G00200870
rosa_samantha Rh5DG331800 Rh5DG331900 Rh5DG332000 Rh5DG332100 Rh5DG332200 Rh5DG362400 Rh5DG362500 Rh5DG362600 Rh5DG362700 Rh5DG362800 Rh5DG362900 Rh5DG363000 Rh5DG363100 Rh5DG363200 Rh5DG363300 Rh5DG363400 Rh5DG363500 Rh5DG363600 Rh5DG363700 Rh5DG363800 Rh5DG365100 Rh5DG365200 Rh5DG365300 Rh5DG365400 Rh5DG365500 Rh5DG365600 Rh5DG365700 Rh5DG365800 Rh5DG365900 Rh5DG366000 Rh5DG366100 Rh5DG366200 Rh5DG366300 Rh5DG366400 Rh5DG366500 Rh5DG366600 Rh5DG366700 Rh5DG366800 Rh5DG366900 Rh5DG367000 Rh5DG367100 Rh5DG367200 Rh5DG367300 Rh5DG367400 Rh5DG367500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 100, 315
AcuI CTGAAG 1 cut(s) 357
AgsI TTSAA 1 cut(s) 277
AjnI CCWGG 1 cut(s) 67
AluBI AGCT 2 cut(s) 257, 337
AluI AGCT 2 cut(s) 257, 337
ApoI RAATTY 2 cut(s) 100, 315
BanII GRGCYC 1 cut(s) 269
BccI CCATC 1 cut(s) 103
BciT130I CCWGG 1 cut(s) 69
BfaI CTAG 2 cut(s) 83, 141
Bme1390I CCNGG 1 cut(s) 69
BmrFI CCNGG 1 cut(s) 69
BmsI GCATC 1 cut(s) 283
Bse1I ACTGG 1 cut(s) 19
Bse3DI GCAATG 2 cut(s) 60, 225
BseBI CCWGG 1 cut(s) 69
BseGI GGATG 1 cut(s) 298
BseMI GCAATG 2 cut(s) 60, 225
BseNI ACTGG 1 cut(s) 19
BsmI GAATGC 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 269
BsrDI GCAATG 2 cut(s) 60, 225
BsrI ACTGG 1 cut(s) 19
Bst2UI CCWGG 1 cut(s) 69
BstDEI CTNAG 1 cut(s) 112
BstF5I GGATG 1 cut(s) 298
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstNI CCWGG 1 cut(s) 69
BstSCI CCNGG 1 cut(s) 67
BtsCI GGATG 1 cut(s) 298
BtsIMutI CAGTG 1 cut(s) 12
CviAII CATG 3 cut(s) 137, 205, 231
CviJI RGCY 4 cut(s) 133, 257, 267, 337
CviKI_1 RGCY 4 cut(s) 133, 257, 267, 337
DdeI CTNAG 1 cut(s) 112
Eco24I GRGCYC 1 cut(s) 269
Eco57I CTGAAG 1 cut(s) 357
EcoRII CCWGG 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 269
FaeI CATG 3 cut(s) 140, 208, 234
FaiI YATR 4 cut(s) 107, 138, 206, 232
FatI CATG 3 cut(s) 136, 204, 230
FokI GGATG 1 cut(s) 305
FriOI GRGCYC 1 cut(s) 269
FspBI CTAG 2 cut(s) 83, 141
Hin1II CATG 3 cut(s) 140, 208, 234
HinfI GANTC 1 cut(s) 322
Hpy166II GTNNAC 2 cut(s) 12, 250
Hpy188I TCNGA 2 cut(s) 313, 376
Hpy8I GTNNAC 2 cut(s) 12, 250
HpyAV CCTTC 1 cut(s) 378
HpyCH4V TGCA 7 cut(s) 32, 53, 77, 123, 204, 242, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
HpyF3I CTNAG 1 cut(s) 112
Hsp92II CATG 3 cut(s) 140, 208, 234
LpnPI CCDG 3 cut(s) 54, 81, 369
LweI GCATC 1 cut(s) 283
MaeI CTAG 2 cut(s) 83, 141
MboII GAAGA 1 cut(s) 363
MhlI GDGCHC 1 cut(s) 269
MluCI AATT 5 cut(s) 100, 171, 278, 315, 344
MmeI TCCRAC 1 cut(s) 270
MnlI CCTC 2 cut(s) 109, 279
MseI TTAA 2 cut(s) 174, 281
MspR9I CCNGG 1 cut(s) 69
Mva1269I GAATGC 1 cut(s) 125
MvaI CCWGG 1 cut(s) 69
MwoI GCNNNNNNNGC 1 cut(s) 83
NlaIII CATG 3 cut(s) 140, 208, 234
PctI GAATGC 1 cut(s) 125
PfeI GAWTC 1 cut(s) 322
Psp6I CCWGG 1 cut(s) 67
PspGI CCWGG 1 cut(s) 67
SaqAI TTAA 2 cut(s) 174, 281
ScrFI CCNGG 1 cut(s) 69
SduI GDGCHC 1 cut(s) 269
SetI ASST 5 cut(s) 11, 146, 200, 259, 339
SfaNI GCATC 1 cut(s) 283
Sse9I AATT 5 cut(s) 100, 171, 278, 315, 344
SspI AATATT 2 cut(s) 36, 159
SspMI CTAG 2 cut(s) 83, 141
StyD4I CCNGG 1 cut(s) 67
TaqI TCGA 1 cut(s) 263
TasI AATT 5 cut(s) 100, 171, 278, 315, 344
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 2 cut(s) 174, 281
Tru9I TTAA 2 cut(s) 174, 281
TscAI CASTG 1 cut(s) 19
TspDTI ATGAA 2 cut(s) 125, 151
TspRI CASTG 1 cut(s) 19
XapI RAATTY 2 cut(s) 100, 315
XspI CTAG 2 cut(s) 83, 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.