Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002881

Physical Location & Seq

Genomic Coordinates Reverse (-)

21355208 .. 21357252

Gene Structure 2045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G205400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGTCTCAAGAATTAACAGGGGCCGAAGAACAAGCAGTGAAAGCCTATGGATGGGCAGCTAGAGATTCCTCTGGTGTTCTTTCTCCCTTCCACTTCACCAGGAGAGGCAATGGTGATAATGATATCAGCATGAAGATACTTTATTGTGGAATTTGCCACTCAGACCTTCACCTCGCCAAGGACGAAGTGGGAATGACCATATATCCCATTGTCCCAGGACACGAGATTGTAGGAGAAGTGACAAAGGTGGGGCGCAATGTCACAAAATTCAAAGTAGGAGACATAGCCGGAGTTGGGTGCATGGTGGGTTCATGTCGCTCATGCGACAACTGTACACAGGACCTGGAAAACTACTGCCCCAAAATGGTGTGGACCTACAACAAACACCACGAAGACGGATCAAGAACCTTCGGTGGATACTCCGACAAGATAGTAGTCGATGAGCACTTCGTCGTTCAAATCCCCAAAAACCTTCCACTACAAGGTACTGCCCCAATGCTGTGTGCTGGGATCACAGTTTACAGCCCTATGAGATACTTTGGACTGATGGAGCCTGGTAAGCATTTGGGTGTAGTGGGGCTTGGTGGCCTTGGCCATATGGCCGTGAAGTTTGCCAAAGCTGTTGGAGCAAAAGTTACTGTGATAAGTACCTCCCCCAATAAGAAGAAGGAAGCTGTGGAACAACTTGGTGTTGATGAATTTCTGATTAGTCACGACCAAGAGCAATTACAGGCTGCCATGGGTACAATGGATGGTATCATCGATACAGTTTCAGCCGCTCACCCTCTCTTGCATTTGGTTGGCCTGTTGAAGACCAATGGAAAACTAATTCTGGTTGGTGCTCCAATCCAGCCTCCTGAGCTACCAGTTTTCCCTTTAATCTTGGGGAGGAAGCTTGTTGCTGGCAGTGCAACTGGGGGAATGAAAGAGACCCAAGAGATGATAGACTTTGCAGCAAAGCACAATATCACAGCAGATGTTGAAGTTATTCCAATGGATTATGTGAACACTGCCCTTGAACGAGTTGCCAAGACTGATGTTAAGTACCGCTTTGTCATTGATGTGGCAAACACCATAAAATCTCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

364

Amino Acids

39.26

Weight (kDa)

6.35

Isoelectric Point (pI)

30.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002881)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g46010
malus_domestica	MD00G1085800.v1.1 MD01G1041700.v1.1 MD01G1042100.v1.1 MD01G1042300.v1.1 MD15G1309000.v1.1
prunus_persica	Prupe.6G205400_v2.0.a1 Prupe.6G206100_v2.0.a1 Prupe.6G206500_v2.0.a1 Prupe.6G206600_v2.0.a1
pyrus_communis	pycom01g06930 pycom01g06940
rosa_chinensis	RchiOBHm_Chr2g0103721 RchiOBHm_Chr2g0110621 RchiOBHm_Chr2g0110641 RchiOBHm_Chr6g0270271
rosa_laevigata	RLG00000017252 RLG00000017827 RLG00000017828
rosa_multiflora	Rmu_sc0000389.1_g000030 Rmu_sc0000389.1_g000036 Rmu_sc0001852.1_g000004
rosa_roxburghii	Rroxscaffold_2G00133090 Rroxscaffold_2G00139450
rosa_rugosa	Rorug02G0116900 Rorug02G0168100 Rorug02G0168100 Rorug02G0168300 Rorug06G0054100
rosa_samantha	Rh2AG165700 Rh2BG173000 Rh2BG230200 Rh2BG230800 Rh2CG171700 Rh2CG223000
rosa_wichuraiana	Rw0G019470 Rw2G012980 Rw2G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	779
AciI	CCGC	2 cut(s)	777, 1048
AclWI	GGATC	2 cut(s)	406, 518
AcoI	YGGCCR	2 cut(s)	592, 600
AcsI	RAATTY	3 cut(s)	150, 266, 698
AfaI	GTAC	5 cut(s)	334, 487, 649, 745, 1046
AfiI	CCNNNNNNNGG	5 cut(s)	51, 178, 294, 364, 482
AgsI	TTSAA	5 cut(s)	271, 458, 811, 983, 1019
AjnI	CCWGG	4 cut(s)	98, 214, 342, 553
AluBI	AGCT	5 cut(s)	59, 620, 674, 862, 895
AluI	AGCT	5 cut(s)	59, 620, 674, 862, 895
Alw21I	GWGCWC	2 cut(s)	447, 844
Alw26I	GTCTC	3 cut(s)	9, 273, 923
AlwI	GGATC	2 cut(s)	406, 518
AlwNI	CAGNNNCTG	1 cut(s)	343
AoxI	GGCC	5 cut(s)	21, 586, 592, 600, 802
ApeKI	GCWGC	3 cut(s)	56, 734, 953
ApoI	RAATTY	3 cut(s)	150, 266, 698
Asp700I	GAANNNNTTC	1 cut(s)	987
AspLEI	GCGC	1 cut(s)	255
AspS9I	GGNCC	3 cut(s)	21, 340, 372
AsuHPI	GGTGA	4 cut(s)	88, 125, 161, 773
AvaII	GGWCC	2 cut(s)	340, 372
BalI	TGGCCA	1 cut(s)	594
BauI	CACGAG	1 cut(s)	221
BbsI	GAAGAC	2 cut(s)	399, 818
Bbv12I	GWGCWC	2 cut(s)	447, 844
BbvI	GCAGC	3 cut(s)	68, 721, 965
BccI	CCATC	3 cut(s)	45, 541, 746
BceAI	ACGGC	1 cut(s)	587
BciT130I	CCWGG	4 cut(s)	100, 216, 344, 555
BciVI	GTATCC	1 cut(s)	410
BcoDI	GTCTC	3 cut(s)	9, 273, 923
BfaI	CTAG	1 cut(s)	60
BfuI	GTATCC	1 cut(s)	410
BisI	GCNGC	4 cut(s)	57, 735, 777, 954
BlsI	GCNGC	4 cut(s)	58, 736, 778, 955
Bme1390I	CCNGG	4 cut(s)	100, 216, 344, 555
Bme18I	GGWCC	2 cut(s)	340, 372
BmgT120I	GGNCC	3 cut(s)	21, 340, 372
BmiI	GGNNCC	2 cut(s)	22, 552
BmrFI	CCNGG	4 cut(s)	100, 216, 344, 555
BmrI	ACTGGG	1 cut(s)	924
BmuI	ACTGGG	1 cut(s)	924
BpiI	GAAGAC	2 cut(s)	399, 818
Bpu10I	CCTNAGC	1 cut(s)	858
Bsa29I	ATCGAT	1 cut(s)	762
BsaI	GGTCTC	1 cut(s)	923
BsaJI	CCNNGG	4 cut(s)	177, 214, 589, 738
BsaXI	ACNNNNNCTCC	2 cut(s)	618, 648
Bsc4I	CCNNNNNNNGG	5 cut(s)	51, 178, 294, 364, 482
Bse1I	ACTGG	2 cut(s)	866, 919
Bse3DI	GCAATG	2 cut(s)	115, 262
BseBI	CCWGG	4 cut(s)	100, 216, 344, 555
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	4 cut(s)	177, 214, 589, 738
BseGI	GGATG	2 cut(s)	56, 757
BseLI	CCNNNNNNNGG	5 cut(s)	51, 178, 294, 364, 482
BseMI	GCAATG	2 cut(s)	115, 262
BseMII	CTCAG	2 cut(s)	174, 849
BseNI	ACTGG	2 cut(s)	866, 919
BseXI	GCAGC	3 cut(s)	68, 721, 965
BseYI	CCCAGC	1 cut(s)	506
BshFI	GGCC	5 cut(s)	23, 588, 594, 602, 804
BshVI	ATCGAT	1 cut(s)	762
BsiHKAI	GWGCWC	2 cut(s)	447, 844
BsiSI	CCGG	1 cut(s)	288
BslFI	GGGAC	1 cut(s)	197
BslI	CCNNNNNNNGG	5 cut(s)	51, 178, 294, 364, 482
BsmAI	GTCTC	3 cut(s)	9, 273, 923
BsmFI	GGGAC	1 cut(s)	197
BsnI	GGCC	5 cut(s)	23, 588, 594, 602, 804
Bso31I	GGTCTC	1 cut(s)	923
Bsp1286I	GDGCHC	2 cut(s)	447, 844
Bsp1407I	TGTACA	1 cut(s)	332
Bsp143I	GATC	2 cut(s)	398, 510
Bsp19I	CCATGG	1 cut(s)	738
BspACI	CCGC	2 cut(s)	777, 1048
BspANI	GGCC	5 cut(s)	23, 588, 594, 602, 804
BspCNI	CTCAG	2 cut(s)	173, 850
BspDI	ATCGAT	1 cut(s)	762
BspLI	GGNNCC	2 cut(s)	22, 552
BspPI	GGATC	2 cut(s)	406, 518
BspTNI	GGTCTC	1 cut(s)	923
BsrBI	CCGCTC	1 cut(s)	779
BsrDI	GCAATG	2 cut(s)	115, 262
BsrGI	TGTACA	1 cut(s)	332
BsrI	ACTGG	2 cut(s)	866, 919
BssECI	CCNNGG	4 cut(s)	177, 214, 589, 738
BssMI	GATC	2 cut(s)	398, 510
BssSI	CACGAG	1 cut(s)	221
BssT1I	CCWWGG	3 cut(s)	177, 589, 738
Bst2BI	CACGAG	1 cut(s)	221
Bst2UI	CCWGG	4 cut(s)	100, 216, 344, 555
Bst4CI	ACNGT	4 cut(s)	332, 517, 640, 769
BstAUI	TGTACA	1 cut(s)	332
BstC8I	GCNNGC	1 cut(s)	904
BstDEI	CTNAG	2 cut(s)	160, 858
BstDSI	CCRYGG	1 cut(s)	738
BstENI	CCTNNNNNAGG	1 cut(s)	176
BstF5I	GGATG	2 cut(s)	56, 757
BstHHI	GCGC	1 cut(s)	255
BstKTI	GATC	2 cut(s)	401, 513
BstMAI	GTCTC	3 cut(s)	9, 273, 923
BstMBI	GATC	2 cut(s)	398, 510
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 559, 626, 859, 908
BstNI	CCWGG	4 cut(s)	100, 216, 344, 555
BstSCI	CCNGG	4 cut(s)	98, 214, 342, 553
BstV1I	GCAGC	3 cut(s)	68, 721, 965
BstV2I	GAAGAC	2 cut(s)	399, 818
Bsu15I	ATCGAT	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	410
BsuRI	GGCC	5 cut(s)	23, 588, 594, 602, 804
BsuTUI	ATCGAT	1 cut(s)	762
BtgI	CCRYGG	1 cut(s)	738
BtsCI	GGATG	2 cut(s)	56, 757
BtsI	GCAGTG	3 cut(s)	42, 913, 1008
BtsIMutI	CAGTG	3 cut(s)	42, 913, 1008
Cac8I	GCNNGC	1 cut(s)	904
CaiI	CAGNNNCTG	1 cut(s)	343
CfoI	GCGC	1 cut(s)	255
Cfr13I	GGNCC	3 cut(s)	21, 340, 372
ClaI	ATCGAT	1 cut(s)	762
Csp6I	GTAC	5 cut(s)	333, 486, 648, 744, 1045
CviAII	CATG	5 cut(s)	130, 301, 312, 321, 739
CviQI	GTAC	5 cut(s)	333, 486, 648, 744, 1045
DdeI	CTNAG	2 cut(s)	160, 858
DpnI	GATC	2 cut(s)	400, 512
DpnII	GATC	2 cut(s)	398, 510
EaeI	YGGCCR	2 cut(s)	592, 600
Eco130I	CCWWGG	3 cut(s)	177, 589, 738
Eco31I	GGTCTC	1 cut(s)	923
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	2 cut(s)	340, 372
EcoNI	CCTNNNNNAGG	1 cut(s)	176
EcoO109I	RGGNCCY	1 cut(s)	340
EcoRII	CCWGG	4 cut(s)	98, 214, 342, 553
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	3 cut(s)	177, 589, 738
ErhI	CCWWGG	3 cut(s)	177, 589, 738
FaeI	CATG	5 cut(s)	133, 304, 315, 324, 742
FalI	AAGNNNNNCTT	2 cut(s)	1034, 1066
FaqI	GGGAC	1 cut(s)	197
FatI	CATG	5 cut(s)	129, 300, 311, 320, 738
FauNDI	CATATG	1 cut(s)	597
Fnu4HI	GCNGC	4 cut(s)	57, 735, 777, 954
FokI	GGATG	2 cut(s)	63, 764
Fsp4HI	GCNGC	4 cut(s)	57, 735, 777, 954
FspBI	CTAG	1 cut(s)	60
GlaI	GCGC	1 cut(s)	254
GluI	GCNGC	4 cut(s)	57, 735, 777, 954
GsaI	CCCAGC	1 cut(s)	510
HaeIII	GGCC	5 cut(s)	23, 588, 594, 602, 804
HapII	CCGG	1 cut(s)	288
HhaI	GCGC	1 cut(s)	255
Hin1II	CATG	5 cut(s)	133, 304, 315, 324, 742
Hin6I	GCGC	1 cut(s)	253
HinP1I	GCGC	1 cut(s)	253
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	1 cut(s)	65
HpaII	CCGG	1 cut(s)	288
HphI	GGTGA	4 cut(s)	88, 125, 161, 773
Hpy166II	GTNNAC	4 cut(s)	335, 372, 520, 1006
Hpy188I	TCNGA	3 cut(s)	163, 424, 705
Hpy188III	TCNNGA	4 cut(s)	8, 402, 713, 857
Hpy8I	GTNNAC	4 cut(s)	335, 372, 520, 1006
Hpy99I	CGWCG	1 cut(s)	455
HpyAV	CCTTC	5 cut(s)	97, 176, 418, 482, 661
HpyCH4III	ACNGT	4 cut(s)	332, 517, 640, 769
HpyCH4V	TGCA	4 cut(s)	300, 793, 911, 953
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 559, 626, 859, 908
HpyF3I	CTNAG	2 cut(s)	160, 858
Hsp92II	CATG	5 cut(s)	133, 304, 315, 324, 742
HspAI	GCGC	1 cut(s)	253
Kzo9I	GATC	2 cut(s)	398, 510
LmnI	GCTCC	3 cut(s)	550, 626, 847
Lsp1109I	GCAGC	3 cut(s)	68, 721, 965
MaeI	CTAG	1 cut(s)	60
MaeIII	GTNAC	4 cut(s)	238, 259, 634, 710
MalI	GATC	2 cut(s)	400, 512
MbiI	CCGCTC	1 cut(s)	779
MboI	GATC	2 cut(s)	398, 510
MboII	GAAGA	5 cut(s)	38, 145, 404, 676, 823
MhlI	GDGCHC	2 cut(s)	447, 844
MlsI	TGGCCA	1 cut(s)	594
MluCI	AATT	6 cut(s)	11, 150, 266, 698, 725, 828
MluNI	TGGCCA	1 cut(s)	594
MmeI	TCCRAC	2 cut(s)	447, 604
MnlI	CCTC	7 cut(s)	79, 98, 182, 661, 795, 864, 882
Mox20I	TGGCCA	1 cut(s)	594
MroXI	GAANNNNTTC	1 cut(s)	987
MscI	TGGCCA	1 cut(s)	594
MseI	TTAA	3 cut(s)	14, 878, 1041
MslI	CAYNNNNRTG	2 cut(s)	567, 1061
Msp20I	TGGCCA	1 cut(s)	594
MspI	CCGG	1 cut(s)	288
MspR9I	CCNGG	4 cut(s)	100, 216, 344, 555
MvaI	CCWGG	4 cut(s)	100, 216, 344, 555
MwoI	GCNNNNNNNGC	5 cut(s)	41, 559, 626, 859, 908
NcoI	CCATGG	1 cut(s)	738
NdeI	CATATG	1 cut(s)	597
NdeII	GATC	2 cut(s)	398, 510
NlaIII	CATG	5 cut(s)	133, 304, 315, 324, 742
NlaIV	GGNNCC	2 cut(s)	22, 552
NmuCI	GTSAC	3 cut(s)	238, 259, 710
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PdmI	GAANNNNTTC	1 cut(s)	987
PfeI	GAWTC	1 cut(s)	65
PkrI	GCNGC	4 cut(s)	58, 736, 778, 955
PpuMI	RGGWCCY	1 cut(s)	340
Psp5II	RGGWCCY	1 cut(s)	340
Psp6I	CCWGG	4 cut(s)	98, 214, 342, 553
PspFI	CCCAGC	1 cut(s)	506
PspGI	CCWGG	4 cut(s)	98, 214, 342, 553
PspN4I	GGNNCC	2 cut(s)	22, 552
PspPI	GGNCC	3 cut(s)	21, 340, 372
PspPPI	RGGWCCY	1 cut(s)	340
PstNI	CAGNNNCTG	1 cut(s)	343
RsaI	GTAC	5 cut(s)	334, 487, 649, 745, 1046
RsaNI	GTAC	5 cut(s)	333, 486, 648, 744, 1045
RseI	CAYNNNNRTG	2 cut(s)	567, 1061
SaqAI	TTAA	3 cut(s)	14, 878, 1041
SatI	GCNGC	4 cut(s)	57, 735, 777, 954
Sau3AI	GATC	2 cut(s)	398, 510
Sau96I	GGNCC	3 cut(s)	21, 340, 372
ScrFI	CCNGG	4 cut(s)	100, 216, 344, 555
SduI	GDGCHC	2 cut(s)	447, 844
SinI	GGWCC	2 cut(s)	340, 372
SmiMI	CAYNNNNRTG	2 cut(s)	567, 1061
SmlI	CTYRAG	1 cut(s)	6
SmoI	CTYRAG	1 cut(s)	6
Sse9I	AATT	6 cut(s)	11, 150, 266, 698, 725, 828
SsiI	CCGC	2 cut(s)	777, 1048
SspMI	CTAG	1 cut(s)	60
StyD4I	CCNGG	4 cut(s)	98, 214, 342, 553
StyI	CCWWGG	3 cut(s)	177, 589, 738
TaaI	ACNGT	4 cut(s)	332, 517, 640, 769
TaqI	TCGA	2 cut(s)	438, 762
TasI	AATT	6 cut(s)	11, 150, 266, 698, 725, 828
TatI	WGTACW	1 cut(s)	332
TauI	GCSGC	1 cut(s)	779
TfiI	GAWTC	1 cut(s)	65
Tru1I	TTAA	3 cut(s)	14, 878, 1041
Tru9I	TTAA	3 cut(s)	14, 878, 1041
TscAI	CASTG	3 cut(s)	42, 913, 1015
TseFI	GTSAC	3 cut(s)	238, 259, 710
TseI	GCWGC	3 cut(s)	56, 734, 953
Tsp45I	GTSAC	3 cut(s)	238, 259, 710
TspDTI	ATGAA	4 cut(s)	146, 300, 711, 938
TspGWI	ACGGA	1 cut(s)	411
TspRI	CASTG	3 cut(s)	42, 913, 1015
VpaK11BI	GGWCC	2 cut(s)	340, 372
XagI	CCTNNNNNAGG	1 cut(s)	176
XapI	RAATTY	3 cut(s)	150, 266, 698
XcmI	CCANNNNNNNNNTGG	2 cut(s)	184, 745
XmnI	GAANNNNTTC	1 cut(s)	987
XspI	CTAG	1 cut(s)	60

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.