Prupe.7G178000_v2.0.a1

IST1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
17572060 .. 17575237
3178 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G178000.1

Sequence Viewer

Length: 1371 bp
ATGACTGTTGCCACTGTAGCCACAACCCACACCAAGAAGCTCGTGAAGCTTGGCCGGTCTCTCTTCCGCTGGGGATTTAACTCCTCCAAATGCAAAATGCAAGCGAAGATGGCGGTGGCTAGGATAAAGCTACTGAGGAACAAGAGACAGGCGGTGGTGAAGCAGATGAGGCGTGACATTGCCTTGCTCCTCCAGTCAGGTCAAGACGCCACTGCTCGAATCCGGGTTGAACATGTGATCAGAGAGCAGAATGTTCTGGCTGCAAATGAGTTCATTGAGCTTTTCTGTGAATTAGTAGTGTCCAGACTTTCTATCATTGCAAAGCAAAGGGAATGTCCAGCTGATCTCAAAGAAGGGATTGCCAGTTTAATCTTTGCATCCCCAAGGTGCTCTGAGATTCCAGAACTAGTGGAGCTTCGGAATATTTTTGAGAAAAAATATGGAAGAGATTTTGTATCTGCCGCTGTTGACCTACGACCCAGCTGTGGTGTAAACCGCATGCTGATTGACAAGCTCTCTGTTAGAACCCCTACTGGTGAAGTAAAGTTGAAACTCCTGAAGGAGATAGCAAAGGAATACCAGGTTGAGTGGGATACATCAGAATCTGAACAGGAGCTTCTCAAGCCTCCAGAAGAGCTTATACAAGGACCGAGCAATTTTGTCAGTGCTACCAGCATGCCTTTGCAGGCCCAATCTGTCGAGCCTAATAAGCCAGACACCAGTTCACGCAGAACAAGTGGCGGTGGAGAAAGGGGATCTGTTCAGCCCAATAAGCCAGGCACCAGCTCTTCACGCAGAACAAGTGGCAGTGGAGAAAGGGGACATATGCATTTTGCAGACTCGGCCTCTGCTGCTGAAGCAGCTGCAAAATCTGCAAATGATGCAATGGCTGCTGCACAAGTTGCTGCATATCTGGCCAACAAAGACTTCAGTCAAACACCTCAAGTTCCTCTAAGCGTCAATAATGGATTTGGAACCCCTTCTGGCCATTCCACTGGCCACTTCATGCCAGATGGTCCACCAGTTGATTCTCAGAATATGGATCACCAATCTCAAGCTTGTGGAATTGATACGTCTCATTCTTCAAGAAATGAGGAAACAGTGCTTAGCCATGGAGATGAGAAGAAATTCGTCTACAGGAGATACAGCTATAATGCCCCATCAGAACATTCAGATATTAGGTTTGATGAATCAGACTGTGATGAAGAAGTTGAACTGGAGGCACCTCCTAGTGGCTTTCATCAAGCACCTGAGCGTCCGCCACCACCCCCACCTTCAGCAGCTACGATTTCTCGAGTTCATCCGAAATTACCAGATTACGACGCACTTGCTGCCCGCTTTGATGCCCTTAAGTTTCGCAAGCCAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

457

Amino Acids

50.15

Weight (kDa)

8.36

Isoelectric Point (pI)

53.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 779, 1222
AccI GTMKAC 1 cut(s) 1134
AciI CCGC 8 cut(s) 67, 113, 152, 462, 496, 741, 1259, 1336
AclWI GGATC 2 cut(s) 763, 1050
AcoI YGGCCR 4 cut(s) 52, 915, 985, 997
AcsI RAATTY 1 cut(s) 1127
AcuI CTGAAG 4 cut(s) 578, 876, 913, 1260
AcyI GRCGYC 1 cut(s) 207
AfiI CCNNNNNNNGG 2 cut(s) 485, 1232
AflII CTTAAG 1 cut(s) 1349
AflIII ACRYGT 1 cut(s) 232
AgsI TTSAA 4 cut(s) 230, 550, 1086, 1214
AhlI ACTAGT 1 cut(s) 406
AjnI CCWGG 2 cut(s) 579, 775
AjuI GAANNNNNNNTTGG 2 cut(s) 911, 943
Alw21I GWGCWC 1 cut(s) 392
Alw26I GTCTC 3 cut(s) 63, 139, 1080
AlwI GGATC 2 cut(s) 763, 1050
AlwNI CAGNNNCTG 1 cut(s) 605
Ama87I CYCGRG 1 cut(s) 1293
AoxI GGCC 6 cut(s) 52, 687, 843, 915, 985, 997
ApeKI GCWGC 9 cut(s) 260, 851, 860, 863, 890, 893, 905, 1280, 1331
ApoI RAATTY 1 cut(s) 1127
ArsI GACNNNNNNTTYG 2 cut(s) 319, 351
Asp700I GAANNNNTTC 2 cut(s) 979, 1127
AspS9I GGNCC 3 cut(s) 647, 688, 1016
AsuC2I CCSGG 1 cut(s) 224
AsuHPI GGTGA 3 cut(s) 169, 548, 1037
AvaI CYCGRG 1 cut(s) 1293
AvaII GGWCC 2 cut(s) 647, 1016
BalI TGGCCA 3 cut(s) 917, 987, 999
BanI GGYRCC 2 cut(s) 779, 1222
BarI GAAGNNNNNNTAC 2 cut(s) 624, 656
BauI CACGAG 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 392
BbvI GCAGC 9 cut(s) 247, 838, 850, 872, 877, 880, 892, 1292, 1318
BccI CCATC 3 cut(s) 103, 1007, 1168
BcgI CGANNNNNNTGC 2 cut(s) 1310, 1344
BciT130I CCWGG 2 cut(s) 581, 777
BciVI GTATCC 1 cut(s) 586
BclI TGATCA 1 cut(s) 237
BcnI CCSGG 1 cut(s) 224
BcoDI GTCTC 3 cut(s) 63, 139, 1080
BcuI ACTAGT 1 cut(s) 406
BfaI CTAG 3 cut(s) 120, 407, 1230
BfmI CTRYAG 2 cut(s) 15, 1135
BfrI CTTAAG 1 cut(s) 1349
BfuI GTATCC 1 cut(s) 586
BlpI GCTNAGC 1 cut(s) 1106
Bme1390I CCNGG 3 cut(s) 224, 581, 777
Bme18I GGWCC 2 cut(s) 647, 1016
BmeT110I CYCGRG 1 cut(s) 1293
BmgT120I GGNCC 3 cut(s) 647, 688, 1016
BmiI GGNNCC 3 cut(s) 781, 976, 1224
BmrFI CCNGG 3 cut(s) 224, 581, 777
BmsI GCATC 3 cut(s) 386, 871, 1333
BoxI GACNNNNGTC 1 cut(s) 930
BpmI CTGGAG 3 cut(s) 176, 612, 1238
Bpu10I CCTNAGC 1 cut(s) 1251
Bpu1102I GCTNAGC 1 cut(s) 1106
BpuEI CTTGAG 3 cut(s) 605, 927, 1038
BpuMI CCSGG 1 cut(s) 224
BsaHI GRCGYC 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 383, 1111
Bsc4I CCNNNNNNNGG 2 cut(s) 485, 1232
Bse118I RCCGGY 1 cut(s) 54
Bse1I ACTGG 7 cut(s) 193, 363, 538, 720, 1000, 1022, 1221
Bse3DI GCAATG 3 cut(s) 177, 315, 891
BseBI CCWGG 2 cut(s) 581, 777
BseDI CCNNGG 2 cut(s) 383, 1111
BseGI GGATG 2 cut(s) 377, 1300
BseLI CCNNNNNNNGG 2 cut(s) 485, 1232
BseMI GCAATG 3 cut(s) 177, 315, 891
BseMII CTCAG 4 cut(s) 125, 384, 1046, 1242
BseNI ACTGG 7 cut(s) 193, 363, 538, 720, 1000, 1022, 1221
BseRI GAGGAG 2 cut(s) 73, 179
BseXI GCAGC 9 cut(s) 247, 838, 850, 872, 877, 880, 892, 1292, 1318
BseYI CCCAGC 2 cut(s) 69, 479
BsgI GTGCAG 1 cut(s) 879
BshFI GGCC 6 cut(s) 54, 689, 845, 917, 987, 999
BshNI GGYRCC 2 cut(s) 779, 1222
BsiHKAI GWGCWC 1 cut(s) 392
BsiHKCI CYCGRG 1 cut(s) 1293
BsiSI CCGG 2 cut(s) 55, 223
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 2 cut(s) 485, 1232
BsmAI GTCTC 3 cut(s) 63, 139, 1080
BsmBI CGTCTC 1 cut(s) 1080
BsmFI GGGAC 1 cut(s) 834
BsnI GGCC 6 cut(s) 54, 689, 845, 917, 987, 999
Bso31I GGTCTC 1 cut(s) 63
BsoBI CYCGRG 1 cut(s) 1293
Bsp1286I GDGCHC 1 cut(s) 392
Bsp143I GATC 4 cut(s) 237, 343, 755, 1042
Bsp1720I GCTNAGC 1 cut(s) 1106
Bsp19I CCATGG 1 cut(s) 1111
BspACI CCGC 8 cut(s) 67, 113, 152, 462, 496, 741, 1259, 1336
BspANI GGCC 6 cut(s) 54, 689, 845, 917, 987, 999
BspCNI CTCAG 4 cut(s) 126, 385, 1045, 1243
BspLI GGNNCC 3 cut(s) 781, 976, 1224
BspPI GGATC 2 cut(s) 763, 1050
BspQI GCTCTTC 2 cut(s) 627, 793
BspT107I GGYRCC 2 cut(s) 779, 1222
BspTI CTTAAG 1 cut(s) 1349
BspTNI GGTCTC 1 cut(s) 63
BsrDI GCAATG 3 cut(s) 177, 315, 891
BsrFI RCCGGY 1 cut(s) 54
BsrI ACTGG 7 cut(s) 193, 363, 538, 720, 1000, 1022, 1221
BssAI RCCGGY 1 cut(s) 54
BssECI CCNNGG 2 cut(s) 383, 1111
BssMI GATC 4 cut(s) 237, 343, 755, 1042
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 1 cut(s) 41
BssT1I CCWWGG 2 cut(s) 383, 1111
Bst2BI CACGAG 1 cut(s) 41
Bst2UI CCWGG 2 cut(s) 581, 777
Bst4CI ACNGT 4 cut(s) 7, 16, 1102, 1199
Bst6I CTCTTC 4 cut(s) 68, 439, 627, 793
BstACI GRCGYC 1 cut(s) 207
BstAFI CTTAAG 1 cut(s) 1349
BstAPI GCANNNNNTGC 5 cut(s) 872, 881, 890, 902, 1331
BstC8I GCNNGC 6 cut(s) 102, 500, 677, 687, 1336, 1361
BstDEI CTNAG 6 cut(s) 134, 393, 953, 1032, 1106, 1251
BstDSI CCRYGG 1 cut(s) 1111
BstF5I GGATG 2 cut(s) 377, 1300
BstKTI GATC 4 cut(s) 240, 346, 758, 1045
BstMAI GTCTC 3 cut(s) 63, 139, 1080
BstMBI GATC 4 cut(s) 237, 343, 755, 1042
BstNI CCWGG 2 cut(s) 581, 777
BstNSI RCATGY 3 cut(s) 236, 502, 679
BstPAI GACNNNNGTC 1 cut(s) 930
BstSCI CCNGG 3 cut(s) 222, 579, 775
BstSFI CTRYAG 2 cut(s) 15, 1135
BstV1I GCAGC 9 cut(s) 247, 838, 850, 872, 877, 880, 892, 1292, 1318
BstX2I RGATCY 1 cut(s) 755
BstXI CCANNNNNNTGG 1 cut(s) 995
BstYI RGATCY 1 cut(s) 755
BsuI GTATCC 1 cut(s) 586
BsuRI GGCC 6 cut(s) 54, 689, 845, 917, 987, 999
BtgI CCRYGG 1 cut(s) 1111
BtsCI GGATG 2 cut(s) 377, 1300
BtsI GCAGTG 2 cut(s) 210, 814
BtsIMutI CAGTG 6 cut(s) 12, 210, 670, 814, 993, 1107
Cac8I GCNNGC 6 cut(s) 102, 500, 677, 687, 1336, 1361
CaiI CAGNNNCTG 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 54
Cfr13I GGNCC 3 cut(s) 647, 688, 1016
CseI GACGC 4 cut(s) 215, 946, 1244, 1331
CsiI ACCWGGT 1 cut(s) 579
CviAII CATG 5 cut(s) 233, 499, 676, 1006, 1112
DdeI CTNAG 6 cut(s) 134, 393, 953, 1032, 1106, 1251
DpnI GATC 4 cut(s) 239, 345, 757, 1044
DpnII GATC 4 cut(s) 237, 343, 755, 1042
EaeI YGGCCR 4 cut(s) 52, 915, 985, 997
Eam1104I CTCTTC 4 cut(s) 68, 439, 627, 793
EarI CTCTTC 4 cut(s) 68, 439, 627, 793
EciI GGCGGA 1 cut(s) 1248
Eco130I CCWWGG 2 cut(s) 383, 1111
Eco31I GGTCTC 1 cut(s) 63
Eco47I GGWCC 2 cut(s) 647, 1016
Eco57I CTGAAG 4 cut(s) 578, 876, 913, 1260
Eco88I CYCGRG 1 cut(s) 1293
EcoRII CCWGG 2 cut(s) 579, 775
EcoT14I CCWWGG 2 cut(s) 383, 1111
EcoT22I ATGCAT 1 cut(s) 831
ErhI CCWWGG 2 cut(s) 383, 1111
Esp3I CGTCTC 1 cut(s) 1080
FaeI CATG 5 cut(s) 236, 502, 679, 1009, 1115
FaqI GGGAC 1 cut(s) 834
FatI CATG 5 cut(s) 232, 498, 675, 1005, 1111
FauI CCCGC 1 cut(s) 1343
FauNDI CATATG 1 cut(s) 825
FbaI TGATCA 1 cut(s) 237
FblI GTMKAC 1 cut(s) 1134
FokI GGATG 2 cut(s) 364, 1287
FspBI CTAG 3 cut(s) 120, 407, 1230
GsaI CCCAGC 2 cut(s) 73, 483
GsuI CTGGAG 3 cut(s) 176, 612, 1238
HaeIII GGCC 6 cut(s) 54, 689, 845, 917, 987, 999
HapII CCGG 2 cut(s) 55, 223
HgaI GACGC 4 cut(s) 215, 946, 1244, 1331
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 5 cut(s) 236, 502, 679, 1009, 1115
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HindIII AAGCTT 2 cut(s) 47, 1056
HinfI GANTC 6 cut(s) 219, 397, 602, 839, 1028, 1190
HpaII CCGG 2 cut(s) 55, 223
HphI GGTGA 3 cut(s) 169, 548, 1037
Hpy166II GTNNAC 5 cut(s) 469, 493, 725, 1019, 1135
Hpy188III TCNNGA 8 cut(s) 43, 203, 303, 401, 556, 629, 1086, 1293
Hpy8I GTNNAC 5 cut(s) 469, 493, 725, 1019, 1135
Hpy99I CGWCG 1 cut(s) 1325
HpyAV CCTTC 4 cut(s) 347, 553, 990, 1284
HpyCH4III ACNGT 4 cut(s) 7, 16, 1102, 1199
HpyCH4IV ACGT 1 cut(s) 1073
HpyF3I CTNAG 6 cut(s) 134, 393, 953, 1032, 1106, 1251
HpySE526I ACGT 1 cut(s) 1073
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 5 cut(s) 236, 502, 679, 1009, 1115
Ksp22I TGATCA 1 cut(s) 237
Kzo9I GATC 4 cut(s) 237, 343, 755, 1042
LguI GCTCTTC 2 cut(s) 627, 793
LmnI GCTCC 3 cut(s) 192, 412, 613
Lsp1109I GCAGC 9 cut(s) 247, 838, 850, 872, 877, 880, 892, 1292, 1318
LweI GCATC 3 cut(s) 386, 871, 1333
MabI ACCWGGT 1 cut(s) 579
MaeI CTAG 3 cut(s) 120, 407, 1230
MaeII ACGT 1 cut(s) 1073
MaeIII GTNAC 1 cut(s) 173
MalI GATC 4 cut(s) 239, 345, 757, 1044
MboI GATC 4 cut(s) 237, 343, 755, 1042
MboII GAAGA 8 cut(s) 55, 118, 456, 644, 780, 1074, 1135, 1217
MflI RGATCY 1 cut(s) 755
MhlI GDGCHC 1 cut(s) 392
MlsI TGGCCA 3 cut(s) 917, 987, 999
MluCI AATT 5 cut(s) 290, 655, 1065, 1127, 1307
MluNI TGGCCA 3 cut(s) 917, 987, 999
MlyI GAGTC 1 cut(s) 833
Mox20I TGGCCA 3 cut(s) 917, 987, 999
Mph1103I ATGCAT 1 cut(s) 831
MroXI GAANNNNTTC 2 cut(s) 979, 1127
MscI TGGCCA 3 cut(s) 917, 987, 999
MseI TTAA 3 cut(s) 78, 368, 1350
MslI CAYNNNNRTG 1 cut(s) 1116
Msp20I TGGCCA 3 cut(s) 917, 987, 999
MspA1I CMGCKG 5 cut(s) 69, 341, 464, 483, 863
MspCI CTTAAG 1 cut(s) 1349
MspI CCGG 2 cut(s) 55, 223
MspR9I CCNGG 3 cut(s) 224, 581, 777
MvaI CCWGG 2 cut(s) 581, 777
NciI CCSGG 1 cut(s) 224
NcoI CCATGG 1 cut(s) 1111
NdeI CATATG 1 cut(s) 825
NdeII GATC 4 cut(s) 237, 343, 755, 1042
NlaIII CATG 5 cut(s) 236, 502, 679, 1009, 1115
NlaIV GGNNCC 3 cut(s) 781, 976, 1224
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 1 cut(s) 173
NsiI ATGCAT 1 cut(s) 831
NspI RCATGY 3 cut(s) 236, 502, 679
PaeI GCATGC 2 cut(s) 502, 679
PaeR7I CTCGAG 1 cut(s) 1293
PciI ACATGT 1 cut(s) 232
PciSI GCTCTTC 2 cut(s) 627, 793
PdmI GAANNNNTTC 2 cut(s) 979, 1127
PfeI GAWTC 5 cut(s) 219, 397, 602, 1028, 1190
PleI GAGTC 1 cut(s) 833
PpsI GAGTC 1 cut(s) 833
PscI ACATGT 1 cut(s) 232
PshAI GACNNNNGTC 1 cut(s) 930
Psp6I CCWGG 2 cut(s) 579, 775
PspFI CCCAGC 2 cut(s) 69, 479
PspGI CCWGG 2 cut(s) 579, 775
PspN4I GGNNCC 3 cut(s) 781, 976, 1224
PspPI GGNCC 3 cut(s) 647, 688, 1016
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 1 cut(s) 755
PvuII CAGCTG 3 cut(s) 341, 483, 863
RseI CAYNNNNRTG 1 cut(s) 1116
SapI GCTCTTC 2 cut(s) 627, 793
SaqAI TTAA 3 cut(s) 78, 368, 1350
Sau3AI GATC 4 cut(s) 237, 343, 755, 1042
Sau96I GGNCC 3 cut(s) 647, 688, 1016
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 3 cut(s) 224, 581, 777
SduI GDGCHC 1 cut(s) 392
SexAI ACCWGGT 1 cut(s) 579
SfaNI GCATC 3 cut(s) 386, 871, 1333
SfcI CTRYAG 2 cut(s) 15, 1135
Sfr274I CTCGAG 1 cut(s) 1293
SinI GGWCC 2 cut(s) 647, 1016
SlaI CTCGAG 1 cut(s) 1293
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 5 cut(s) 620, 942, 1053, 1293, 1349
SmoI CTYRAG 5 cut(s) 620, 942, 1053, 1293, 1349
SpeI ACTAGT 1 cut(s) 406
SphI GCATGC 2 cut(s) 502, 679
Sse9I AATT 5 cut(s) 290, 655, 1065, 1127, 1307
SsiI CCGC 8 cut(s) 67, 113, 152, 462, 496, 741, 1259, 1336
SspI AATATT 1 cut(s) 424
SspMI CTAG 3 cut(s) 120, 407, 1230
StyD4I CCNGG 3 cut(s) 222, 579, 775
StyI CCWWGG 2 cut(s) 383, 1111
TaaI ACNGT 4 cut(s) 7, 16, 1102, 1199
TaiI ACGT 1 cut(s) 1076
TaqI TCGA 3 cut(s) 217, 699, 1294
TaqII GACCGA 1 cut(s) 664
TasI AATT 5 cut(s) 290, 655, 1065, 1127, 1307
TauI GCSGC 1 cut(s) 464
TfiI GAWTC 5 cut(s) 219, 397, 602, 1028, 1190
Tru1I TTAA 3 cut(s) 78, 368, 1350
Tru9I TTAA 3 cut(s) 78, 368, 1350
TscAI CASTG 6 cut(s) 19, 217, 670, 814, 1000, 1107
TseFI GTSAC 1 cut(s) 173
TseI GCWGC 9 cut(s) 260, 851, 860, 863, 890, 893, 905, 1280, 1331
Tsp45I GTSAC 1 cut(s) 173
TspDTI ATGAA 6 cut(s) 262, 994, 1203, 1218, 1229, 1289
TspRI CASTG 6 cut(s) 19, 217, 670, 814, 1000, 1107
Vha464I CTTAAG 1 cut(s) 1349
VpaK11BI GGWCC 2 cut(s) 647, 1016
XapI RAATTY 1 cut(s) 1127
XceI RCATGY 3 cut(s) 236, 502, 679
XhoI CTCGAG 1 cut(s) 1293
XmiI GTMKAC 1 cut(s) 1134
XmnI GAANNNNTTC 2 cut(s) 979, 1127
XspI CTAG 3 cut(s) 120, 407, 1230
Zsp2I ATGCAT 1 cut(s) 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.