pycom03g03670

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0001338
Physical Location & Seq
Forward (+)
2914792 .. 2916202
1411 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g03670.2

Sequence Viewer

Length: 294 bp
ATGGAGCTTCTTCAGTTTGATGCGAAAATGTTGATGTCCCTTGTGTTTCTAGGGTTTGTAGGGTTGTTTGTGCGGTGGTATGATAGGCTTGTTGCGAAGCCGAAGAGGCTGAGGTCCTTGCTAACTAAGCAAGGCATCAATGGACCTCCACCTACACTTCTTCTGGGAAATATTATGGAGATAAAGAAGGCTCGAGGCTCCAGCAATCCTACCAGTGGATTAATCCCCAGCTCCCACAATTGCGCTGCTCTTGTCTTTCCATTTTTTGATAAGTGGAGGAAACAATATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

98

Amino Acids

10.97

Weight (kDa)

10.35

Isoelectric Point (pI)

57.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 73
AfiI CCNNNNNNNGG 1 cut(s) 215
AluBI AGCT 2 cut(s) 7, 231
AluI AGCT 2 cut(s) 7, 231
Ama87I CYCGRG 1 cut(s) 192
ApeKI GCWGC 1 cut(s) 245
AseI ATTAAT 1 cut(s) 221
AspLEI GCGC 1 cut(s) 245
AspS9I GGNCC 2 cut(s) 114, 143
AvaI CYCGRG 1 cut(s) 192
AvaII GGWCC 2 cut(s) 114, 143
BbvCI CCTCAGC 1 cut(s) 110
BbvI GCAGC 1 cut(s) 232
BfaI CTAG 1 cut(s) 50
BglI GCCNNNNNGGC 1 cut(s) 106
BisI GCNGC 1 cut(s) 246
BlsI GCNGC 1 cut(s) 247
Bme18I GGWCC 2 cut(s) 114, 143
BmeT110I CYCGRG 1 cut(s) 192
BmgT120I GGNCC 2 cut(s) 114, 143
BmiI GGNNCC 1 cut(s) 199
BmsI GCATC 2 cut(s) 10, 144
BpmI CTGGAG 1 cut(s) 184
Bpu10I CCTNAGC 1 cut(s) 110
Bsc4I CCNNNNNNNGG 1 cut(s) 215
Bse1I ACTGG 1 cut(s) 213
BseLI CCNNNNNNNGG 1 cut(s) 215
BseMII CTCAG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 213
BseXI GCAGC 1 cut(s) 232
BseYI CCCAGC 1 cut(s) 227
BsiHKCI CYCGRG 1 cut(s) 192
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 1 cut(s) 215
BsmFI GGGAC 1 cut(s) 22
BsoBI CYCGRG 1 cut(s) 192
BspACI CCGC 1 cut(s) 73
BspCNI CTCAG 1 cut(s) 102
BspLI GGNNCC 1 cut(s) 199
BsrI ACTGG 1 cut(s) 213
Bst6I CTCTTC 1 cut(s) 98
BstDEI CTNAG 2 cut(s) 110, 126
BstHHI GCGC 1 cut(s) 245
BstMWI GCNNNNNNNGC 2 cut(s) 106, 127
BstV1I GCAGC 1 cut(s) 232
BtsIMutI CAGTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 245
Cfr13I GGNCC 2 cut(s) 114, 143
CviJI RGCY 7 cut(s) 7, 88, 100, 109, 191, 198, 231
CviKI_1 RGCY 7 cut(s) 7, 88, 100, 109, 191, 198, 231
DdeI CTNAG 2 cut(s) 110, 126
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 114, 143
Eco88I CYCGRG 1 cut(s) 192
EcoO109I RGGNCCY 1 cut(s) 114
FaiI YATR 3 cut(s) 81, 176, 288
FaqI GGGAC 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 246
Fsp4HI GCNGC 1 cut(s) 246
FspBI CTAG 1 cut(s) 50
GlaI GCGC 1 cut(s) 244
GluI GCNGC 1 cut(s) 246
GsaI CCCAGC 1 cut(s) 231
GsuI CTGGAG 1 cut(s) 184
HhaI GCGC 1 cut(s) 245
Hin6I GCGC 1 cut(s) 243
HinP1I GCGC 1 cut(s) 243
HpyAV CCTTC 1 cut(s) 181
HpyF10VI GCNNNNNNNGC 2 cut(s) 106, 127
HpyF3I CTNAG 2 cut(s) 110, 126
HspAI GCGC 1 cut(s) 243
LmnI GCTCC 3 cut(s) 4, 203, 236
LpnPI CCDG 4 cut(s) 149, 214, 226, 241
Lsp1109I GCAGC 1 cut(s) 232
LweI GCATC 2 cut(s) 10, 144
MaeI CTAG 1 cut(s) 50
MboII GAAGA 2 cut(s) 115, 152
MfeI CAATTG 1 cut(s) 238
MluCI AATT 1 cut(s) 238
MnlI CCTC 5 cut(s) 99, 105, 156, 188, 270
MseI TTAA 2 cut(s) 221, 292
MunI CAATTG 1 cut(s) 238
MwoI GCNNNNNNNGC 2 cut(s) 106, 127
NlaIV GGNNCC 1 cut(s) 199
PaeR7I CTCGAG 1 cut(s) 192
PkrI GCNGC 1 cut(s) 247
PpuMI RGGWCCY 1 cut(s) 114
PshBI ATTAAT 1 cut(s) 221
Psp5II RGGWCCY 1 cut(s) 114
PspFI CCCAGC 1 cut(s) 227
PspN4I GGNNCC 1 cut(s) 199
PspPI GGNCC 2 cut(s) 114, 143
PspPPI RGGWCCY 1 cut(s) 114
PspXI VCTCGAGB 1 cut(s) 192
SaqAI TTAA 2 cut(s) 221, 292
SatI GCNGC 1 cut(s) 246
Sau96I GGNCC 2 cut(s) 114, 143
SetI ASST 5 cut(s) 9, 116, 148, 154, 233
SfaNI GCATC 2 cut(s) 10, 144
Sfr274I CTCGAG 1 cut(s) 192
SinI GGWCC 2 cut(s) 114, 143
SlaI CTCGAG 1 cut(s) 192
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
Sse9I AATT 1 cut(s) 238
SsiI CCGC 1 cut(s) 73
SspI AATATT 1 cut(s) 172
SspMI CTAG 1 cut(s) 50
TaqI TCGA 1 cut(s) 193
TasI AATT 1 cut(s) 238
Tru1I TTAA 2 cut(s) 221, 292
Tru9I TTAA 2 cut(s) 221, 292
TscAI CASTG 1 cut(s) 220
TseI GCWGC 1 cut(s) 245
TspRI CASTG 1 cut(s) 220
VpaK11BI GGWCC 2 cut(s) 114, 143
VspI ATTAAT 1 cut(s) 221
XhoI CTCGAG 1 cut(s) 192
XspI CTAG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.