RchiOBHm_Chr3g0448361

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
627744 .. 629814
2071 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41580

Sequence Viewer

Length: 1539 bp
ATGGAGCCTGAAAAGATGTTCATGTCCTTTGCGTTGCTTGCTTTCCTGGGTTTGTTTGCTTGTCTATACAATGCCTTGGTGATGAAGCCGGAGAAGCTAAGATCAATCCTGAGGAAGCAAGGCATTGTTGGACCGCCTCCTACCTTCTTGCTCGGAAATATCAAGGAGATCAAGAAGGCTCAAAAGTCCCCAACCCAAGACGCTACCATAACTCAACTCCTAGCCTCCCACAACCTTGCCGCTACTCTCTTTCCCTTCTTTGAAGAATGGAGAAACAAATATGGTCAAGTGTTCAACTTCTCCCTTGGCAACACACAAATATTGTATGTGAATGAATCTGAAGCTGTGAGAGAAATAACCACATGCACATCTTTGGACTTGGGGAAGCCTACCTATCAGTTCAAAGAGCGTGGCCCTTTGCTTGGCCAAGGCATTCTAACTTCAAATGGTGCTGTTTGGGCACATCAGAGAAAAGTCCTTGCTCCACAATTATACATGGACAAGGTTAAGGGGATGATAAATCTTATCACAGAATCTGCGATTACATTGCAAGAGTCATGGAAAAGTAGGATTGATGAAGAGGGTGGGGTGGCAGATATCAATATTGATGAGGACATGAGAAGCTTCTCGGGAGATGTTATCTCAAGAGCTTGTTTTGGAAGCAACTTTGCCAGTGGGCAAGTGATCTTTCACAAACTAAGAGATCTCCAAGAAGCCATGTCTAGGAAATGCTTGGCCACAGGGATTCCTGGAATGAGGCATCTTCCTACAAAGAACAGAAGAGAAGCATGGAGACTAGAAAAAGAGGTTCACAATTTGATACTCCAAGTTGTGAAGCAGAGAGCGGAAGGTGCATATGAGAATGATCTGTTGCAAATGGTTCTTGAGGGTGCCAAAAACAGTGACCTAAGCCAAGCGGAAACTGATCGGTTCATTGTTGATAACTGCAAGAACATCTACTTGGCTGGTTATGAGACCACTGCAGTCTCTGCCACATGGTTGCTCATGTTGTTGGCTTCAAATCAAGAATGGCAAGAACGCGTCCGCGCCGAGGTTCTTCAAGTTTGTGGTGGCCAGATTCCAGATGCTGACATGCTCCGTAAGATGAAACAGCTAACAATGGTAATTCACGAATCGTTGCGTCTCTATCCACCGGTGTCTGTGGTATCAAGGGAGGCCTTCAAGGATATGAAATTTGGGGGCATATTTGTTCCCAAGGGTGTGAACCTATGGGTTATGGTACTGACATTGCACACGGACCCTGAAGTATGGGGACCAGATGCCTACAAGTTCAACCCAGAAAGATTTGCAAATGGAATTACTGGGGCTTGTAAGCTTCCTCACTTGTACATGCCATTTGGGGTTGGACCAAGAGTGTGTCTTGGGCAAAACTTGGCCATGATTGAGCTCAAAATACTAGTAGCTCTTATTCTCTCTAAATTTTCTTTCTCCCTATCTTCCAAGTACTGCCACAAACCAGCAATAAGGTTGGTCATTGAGCCTGAGCAGGGAGTCAATCTCTTAGTGAAGAAGTTGTGA

Protein Analysis

512

Amino Acids

57.59

Weight (kDa)

8.86

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 81 - 493 2.1e-85 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 890
AccBSI CCGCTC 1 cut(s) 845
AccII CGCG 2 cut(s) 1041, 1047
AciI CCGC 5 cut(s) 134, 240, 845, 917, 1045
AcoI YGGCCR 4 cut(s) 424, 735, 1072, 1395
AcsI RAATTY 2 cut(s) 1193, 1439
AcuI CTGAAG 2 cut(s) 360, 1284
AfaI GTAC 3 cut(s) 1242, 1349, 1466
AfiI CCNNNNNNNGG 4 cut(s) 422, 723, 1051, 1508
AflIII ACRYGT 1 cut(s) 1039
AgeI ACCGGT 1 cut(s) 1153
AgsI TTSAA 8 cut(s) 263, 295, 403, 444, 1020, 1061, 1183, 1294
AhlI ACTAGT 1 cut(s) 1417
AjnI CCWGG 2 cut(s) 45, 748
AjuI GAANNNNNNNTTGG 2 cut(s) 944, 976
AluBI AGCT 8 cut(s) 97, 344, 624, 650, 1114, 1336, 1408, 1424
AluI AGCT 8 cut(s) 97, 344, 624, 650, 1114, 1336, 1408, 1424
Alw21I GWGCWC 1 cut(s) 1410
Alw26I GTCTC 4 cut(s) 787, 968, 991, 1148
AlwNI CAGNNNCTG 3 cut(s) 536, 989, 1088
Ama87I CYCGRG 1 cut(s) 628
AoxI GGCC 6 cut(s) 412, 424, 735, 1072, 1176, 1395
ApoI RAATTY 2 cut(s) 1193, 1439
AsiGI ACCGGT 1 cut(s) 1153
AspLEI GCGC 1 cut(s) 1049
AspS9I GGNCC 5 cut(s) 131, 413, 1258, 1274, 1367
AsuHPI GGTGA 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 628
AvaII GGWCC 4 cut(s) 131, 1258, 1274, 1367
AxyI CCTNAGG 1 cut(s) 110
BaeGI GKGCMC 1 cut(s) 463
BalI TGGCCA 4 cut(s) 426, 737, 1074, 1397
BanI GGYRCC 1 cut(s) 890
BanII GRGCYC 1 cut(s) 1410
Bbv12I GWGCWC 1 cut(s) 1410
BcgI CGANNNNNNTGC 2 cut(s) 529, 563
BciT130I CCWGG 2 cut(s) 47, 750
BcoDI GTCTC 4 cut(s) 787, 968, 991, 1148
BcuI ACTAGT 1 cut(s) 1417
BfaI CTAG 4 cut(s) 221, 723, 797, 1418
BfmI CTRYAG 1 cut(s) 981
BglII AGATCT 1 cut(s) 703
BisI GCNGC 1 cut(s) 240
BlsI GCNGC 1 cut(s) 241
BmcAI AGTACT 1 cut(s) 1466
Bme1390I CCNGG 2 cut(s) 47, 750
Bme18I GGWCC 4 cut(s) 131, 1258, 1274, 1367
BmeT110I CYCGRG 1 cut(s) 628
BmgT120I GGNCC 5 cut(s) 131, 413, 1258, 1274, 1367
BmiI GGNNCC 4 cut(s) 6, 892, 1260, 1275
BmrFI CCNGG 2 cut(s) 47, 750
BmrI ACTGGG 1 cut(s) 1332
BmsI GCATC 3 cut(s) 769, 1075, 1270
BmuI ACTGGG 1 cut(s) 1332
BplI GAGNNNNNCTC 2 cut(s) 1503, 1535
Bpu10I CCTNAGC 2 cut(s) 908, 1503
BpuEI CTTGAG 2 cut(s) 628, 905
BsaI GGTCTC 1 cut(s) 968
BsaJI CCNNGG 6 cut(s) 46, 75, 304, 427, 1050, 1215
BsaWI WCCGGW 1 cut(s) 1153
Bsc4I CCNNNNNNNGG 4 cut(s) 422, 723, 1051, 1508
Bse118I RCCGGY 1 cut(s) 1153
Bse1I ACTGG 2 cut(s) 672, 1327
Bse21I CCTNAGG 1 cut(s) 110
Bse3DI GCAATG 2 cut(s) 545, 1247
BseBI CCWGG 2 cut(s) 47, 750
BseDI CCNNGG 6 cut(s) 46, 75, 304, 427, 1050, 1215
BseGI GGATG 1 cut(s) 519
BseLI CCNNNNNNNGG 4 cut(s) 422, 723, 1051, 1508
BseMI GCAATG 2 cut(s) 545, 1247
BseMII CTCAG 2 cut(s) 101, 1494
BseNI ACTGG 2 cut(s) 672, 1327
BseSI GKGCMC 1 cut(s) 463
Bsh1236I CGCG 2 cut(s) 1041, 1047
BshFI GGCC 6 cut(s) 414, 426, 737, 1074, 1178, 1397
BshNI GGYRCC 1 cut(s) 890
BshTI ACCGGT 1 cut(s) 1153
BsiHKAI GWGCWC 1 cut(s) 1410
BsiHKCI CYCGRG 1 cut(s) 628
BsiSI CCGG 2 cut(s) 89, 1154
BslFI GGGAC 2 cut(s) 172, 1287
BslI CCNNNNNNNGG 4 cut(s) 422, 723, 1051, 1508
BsmAI GTCTC 4 cut(s) 787, 968, 991, 1148
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 2 cut(s) 172, 1287
BsmI GAATGC 1 cut(s) 432
BsnI GGCC 6 cut(s) 414, 426, 737, 1074, 1178, 1397
Bso31I GGTCTC 1 cut(s) 968
BsoBI CYCGRG 1 cut(s) 628
Bsp1286I GDGCHC 2 cut(s) 463, 1410
Bsp1407I TGTACA 1 cut(s) 1347
Bsp143I GATC 6 cut(s) 101, 168, 684, 703, 865, 925
BspACI CCGC 5 cut(s) 134, 240, 845, 917, 1045
BspANI GGCC 6 cut(s) 414, 426, 737, 1074, 1178, 1397
BspCNI CTCAG 2 cut(s) 102, 1495
BspFNI CGCG 2 cut(s) 1041, 1047
BspLI GGNNCC 4 cut(s) 6, 892, 1260, 1275
BspMAI CTGCAG 1 cut(s) 985
BspT107I GGYRCC 1 cut(s) 890
BspTNI GGTCTC 1 cut(s) 968
BsrBI CCGCTC 1 cut(s) 845
BsrDI GCAATG 2 cut(s) 545, 1247
BsrFI RCCGGY 1 cut(s) 1153
BsrGI TGTACA 1 cut(s) 1347
BsrI ACTGG 2 cut(s) 672, 1327
BssAI RCCGGY 1 cut(s) 1153
BssECI CCNNGG 6 cut(s) 46, 75, 304, 427, 1050, 1215
BssMI GATC 6 cut(s) 101, 168, 684, 703, 865, 925
BssT1I CCWWGG 4 cut(s) 75, 304, 427, 1215
Bst2UI CCWGG 2 cut(s) 47, 750
Bst4CI ACNGT 1 cut(s) 902
Bst6I CTCTTC 2 cut(s) 573, 775
BstAPI GCANNNNNTGC 1 cut(s) 989
BstAUI TGTACA 1 cut(s) 1347
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 6 cut(s) 98, 110, 698, 908, 1503, 1522
BstF5I GGATG 1 cut(s) 519
BstFNI CGCG 2 cut(s) 1041, 1047
BstHHI GCGC 1 cut(s) 1049
BstKTI GATC 6 cut(s) 104, 171, 687, 706, 868, 928
BstMAI GTCTC 4 cut(s) 787, 968, 991, 1148
BstMBI GATC 6 cut(s) 101, 168, 684, 703, 865, 925
BstMWI GCNNNNNNNGC 5 cut(s) 38, 94, 458, 851, 989
BstNI CCWGG 2 cut(s) 47, 750
BstNSI RCATGY 3 cut(s) 366, 1096, 1354
BstSCI CCNGG 2 cut(s) 45, 748
BstSFI CTRYAG 1 cut(s) 981
BstSLI GKGCMC 1 cut(s) 463
BstUI CGCG 2 cut(s) 1041, 1047
BstX2I RGATCY 1 cut(s) 703
BstYI RGATCY 1 cut(s) 703
Bsu36I CCTNAGG 1 cut(s) 110
BsuRI GGCC 6 cut(s) 414, 426, 737, 1074, 1178, 1397
BtsCI GGATG 1 cut(s) 519
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 3 cut(s) 679, 907, 978
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 3 cut(s) 536, 989, 1088
CfoI GCGC 1 cut(s) 1049
Cfr10I RCCGGY 1 cut(s) 1153
Cfr13I GGNCC 5 cut(s) 131, 413, 1258, 1274, 1367
CseI GACGC 3 cut(s) 209, 1030, 1130
Csp6I GTAC 3 cut(s) 1241, 1348, 1465
CspAI ACCGGT 1 cut(s) 1153
CspCI CAANNNNNGTGG 2 cut(s) 391, 426
CviQI GTAC 3 cut(s) 1241, 1348, 1465
DdeI CTNAG 6 cut(s) 98, 110, 698, 908, 1503, 1522
DpnI GATC 6 cut(s) 103, 170, 686, 705, 867, 927
DpnII GATC 6 cut(s) 101, 168, 684, 703, 865, 925
EaeI YGGCCR 4 cut(s) 424, 735, 1072, 1395
Eam1104I CTCTTC 2 cut(s) 573, 775
EarI CTCTTC 2 cut(s) 573, 775
Ecl136II GAGCTC 1 cut(s) 1408
Eco130I CCWWGG 4 cut(s) 75, 304, 427, 1215
Eco147I AGGCCT 1 cut(s) 1178
Eco24I GRGCYC 1 cut(s) 1410
Eco31I GGTCTC 1 cut(s) 968
Eco32I GATATC 1 cut(s) 598
Eco47I GGWCC 4 cut(s) 131, 1258, 1274, 1367
Eco53kI GAGCTC 1 cut(s) 1408
Eco57I CTGAAG 2 cut(s) 360, 1284
Eco81I CCTNAGG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 628
EcoICRI GAGCTC 1 cut(s) 1408
EcoRII CCWGG 2 cut(s) 45, 748
EcoRV GATATC 1 cut(s) 598
EcoT14I CCWWGG 4 cut(s) 75, 304, 427, 1215
EcoT38I GRGCYC 1 cut(s) 1410
ErhI CCWWGG 4 cut(s) 75, 304, 427, 1215
Esp3I CGTCTC 1 cut(s) 1148
FaqI GGGAC 2 cut(s) 172, 1287
FauNDI CATATG 1 cut(s) 856
Fnu4HI GCNGC 1 cut(s) 240
FokI GGATG 1 cut(s) 526
FriOI GRGCYC 1 cut(s) 1410
Fsp4HI GCNGC 1 cut(s) 240
FspBI CTAG 4 cut(s) 221, 723, 797, 1418
GlaI GCGC 1 cut(s) 1048
GluI GCNGC 1 cut(s) 240
HaeIII GGCC 6 cut(s) 414, 426, 737, 1074, 1178, 1397
HapII CCGG 2 cut(s) 89, 1154
HgaI GACGC 3 cut(s) 209, 1030, 1130
HhaI GCGC 1 cut(s) 1049
Hin6I GCGC 1 cut(s) 1047
HinP1I GCGC 1 cut(s) 1047
HindIII AAGCTT 2 cut(s) 622, 1334
HinfI GANTC 7 cut(s) 335, 533, 554, 745, 1078, 1133, 1512
HpaII CCGG 2 cut(s) 89, 1154
HphI GGTGA 1 cut(s) 91
Hpy166II GTNNAC 2 cut(s) 811, 1225
Hpy188I TCNGA 3 cut(s) 155, 340, 468
Hpy188III TCNNGA 8 cut(s) 109, 172, 630, 645, 884, 1025, 1082, 1130
Hpy8I GTNNAC 2 cut(s) 811, 1225
HpyAV CCTTC 5 cut(s) 154, 169, 265, 842, 1189
HpyCH4III ACNGT 1 cut(s) 902
HpyCH4V TGCA 8 cut(s) 366, 550, 854, 874, 948, 983, 1252, 1310
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 94, 458, 851, 989
HpyF3I CTNAG 6 cut(s) 98, 110, 698, 908, 1503, 1522
HspAI GCGC 1 cut(s) 1047
Kzo9I GATC 6 cut(s) 101, 168, 684, 703, 865, 925
LmnI GCTCC 3 cut(s) 4, 487, 1101
LweI GCATC 3 cut(s) 769, 1075, 1270
MaeI CTAG 4 cut(s) 221, 723, 797, 1418
MaeIII GTNAC 1 cut(s) 902
MalI GATC 6 cut(s) 103, 170, 686, 705, 867, 927
MbiI CCGCTC 1 cut(s) 845
MboI GATC 6 cut(s) 101, 168, 684, 703, 865, 925
MboII GAAGA 6 cut(s) 275, 590, 755, 792, 1049, 1449
MflI RGATCY 1 cut(s) 703
MhlI GDGCHC 2 cut(s) 463, 1410
MlsI TGGCCA 4 cut(s) 426, 737, 1074, 1397
MluCI AATT 6 cut(s) 488, 814, 1125, 1193, 1317, 1439
MluI ACGCGT 1 cut(s) 1039
MluNI TGGCCA 4 cut(s) 426, 737, 1074, 1397
MlyI GAGTC 2 cut(s) 563, 1521
MmeI TCCRAC 2 cut(s) 109, 1345
Mox20I TGGCCA 4 cut(s) 426, 737, 1074, 1397
MscI TGGCCA 4 cut(s) 426, 737, 1074, 1397
MseI TTAA 1 cut(s) 507
Msp20I TGGCCA 4 cut(s) 426, 737, 1074, 1397
MspI CCGG 2 cut(s) 89, 1154
MspR9I CCNGG 2 cut(s) 47, 750
Mva1269I GAATGC 1 cut(s) 432
MvaI CCWGG 2 cut(s) 47, 750
MvnI CGCG 2 cut(s) 1041, 1047
MwoI GCNNNNNNNGC 5 cut(s) 38, 94, 458, 851, 989
NdeI CATATG 1 cut(s) 856
NdeII GATC 6 cut(s) 101, 168, 684, 703, 865, 925
NlaIV GGNNCC 4 cut(s) 6, 892, 1260, 1275
NmeAIII GCCGAG 1 cut(s) 1075
NmuCI GTSAC 1 cut(s) 902
NspI RCATGY 3 cut(s) 366, 1096, 1354
PceI AGGCCT 1 cut(s) 1178
PctI GAATGC 1 cut(s) 432
PfeI GAWTC 5 cut(s) 335, 533, 745, 1078, 1133
PfoI TCCNGGA 1 cut(s) 748
PinAI ACCGGT 1 cut(s) 1153
PkrI GCNGC 1 cut(s) 241
PleI GAGTC 2 cut(s) 562, 1520
PpsI GAGTC 2 cut(s) 562, 1520
Psp124BI GAGCTC 1 cut(s) 1410
Psp6I CCWGG 2 cut(s) 45, 748
PspGI CCWGG 2 cut(s) 45, 748
PspN4I GGNNCC 4 cut(s) 6, 892, 1260, 1275
PspPI GGNCC 5 cut(s) 131, 413, 1258, 1274, 1367
PstI CTGCAG 1 cut(s) 985
PstNI CAGNNNCTG 3 cut(s) 536, 989, 1088
PsuI RGATCY 1 cut(s) 703
RsaI GTAC 3 cut(s) 1242, 1349, 1466
RsaNI GTAC 3 cut(s) 1241, 1348, 1465
SacI GAGCTC 1 cut(s) 1410
SaqAI TTAA 1 cut(s) 507
SatI GCNGC 1 cut(s) 240
Sau3AI GATC 6 cut(s) 101, 168, 684, 703, 865, 925
Sau96I GGNCC 5 cut(s) 131, 413, 1258, 1274, 1367
ScaI AGTACT 1 cut(s) 1466
SchI GAGTC 2 cut(s) 563, 1521
ScrFI CCNGG 2 cut(s) 47, 750
SduI GDGCHC 2 cut(s) 463, 1410
SfaNI GCATC 3 cut(s) 769, 1075, 1270
SfcI CTRYAG 1 cut(s) 981
SgrAI CRCCGGYG 1 cut(s) 1153
SinI GGWCC 4 cut(s) 131, 1258, 1274, 1367
SmlI CTYRAG 2 cut(s) 643, 884
SmoI CTYRAG 2 cut(s) 643, 884
SpeI ACTAGT 1 cut(s) 1417
Sse9I AATT 6 cut(s) 488, 814, 1125, 1193, 1317, 1439
SseBI AGGCCT 1 cut(s) 1178
SsiI CCGC 5 cut(s) 134, 240, 845, 917, 1045
SspI AATATT 2 cut(s) 321, 604
SspMI CTAG 4 cut(s) 221, 723, 797, 1418
SstI GAGCTC 1 cut(s) 1410
StuI AGGCCT 1 cut(s) 1178
StyD4I CCNGG 2 cut(s) 45, 748
StyI CCWWGG 4 cut(s) 75, 304, 427, 1215
TaaI ACNGT 1 cut(s) 902
TasI AATT 6 cut(s) 488, 814, 1125, 1193, 1317, 1439
TatI WGTACW 2 cut(s) 1347, 1464
TauI GCSGC 1 cut(s) 242
TfiI GAWTC 5 cut(s) 335, 533, 745, 1078, 1133
Tru1I TTAA 1 cut(s) 507
Tru9I TTAA 1 cut(s) 507
TscAI CASTG 3 cut(s) 679, 907, 985
TseFI GTSAC 1 cut(s) 902
Tsp45I GTSAC 1 cut(s) 902
TspDTI ATGAA 7 cut(s) 10, 98, 348, 591, 922, 1121, 1205
TspGWI ACGGA 2 cut(s) 1088, 1271
TspRI CASTG 3 cut(s) 679, 907, 985
VpaK11BI GGWCC 4 cut(s) 131, 1258, 1274, 1367
XapI RAATTY 2 cut(s) 1193, 1439
XceI RCATGY 3 cut(s) 366, 1096, 1354
XspI CTAG 4 cut(s) 221, 723, 797, 1418
ZrmI AGTACT 1 cut(s) 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.