RLG00000025921

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
49184980 .. 49187011
2032 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025921

Sequence Viewer

Length: 1416 bp
ATGGAGCCTGAAAAGATGTTCATGTCCTTTGCATTGCTTGCTTTCCTGGGTTTGTTTGCTCGTCTATACAATGCCTTGGTGATGAAGCCGGAGAAGCTAAGATCAATCCTGAGGAGGCAAGGCATTGTTGGACCGCCTCCAACCTTCTTGCTCGGAAATATCAAGGAGATCAAGAAGGCTCAAAAGTCCCCAACCCAAAACGCTACCACTACTCAACTCCTAGCCTCCCACAACCTTGCTGCTACTCTCTTTCCCTTCTTTGAAGAATGGAGAAACAAATATGGTCAAGTGTTCAACTTCTCCCTTGGCAACACACAAATATTGTATGTGAATGAATCTGAAGCTAGAAAAGTCCTTGCTCCACAATTATACATGGACAAGGTTAAGGGGATGATAAATCTTATCACAGAGTCTGCGATTACATTGCAAGAGTCATGGAAAAGTAGGATTGATGAAGAGGGTGGGGTGGCAGATATCAATATTGATGAGGACATGAGAAGCTTCTCGGGAGATGTTATCTCAAGAGCTTGTTTTGGAAGCAACTTTGCCAGTGGGCAAGTGATCTTTCACAAACTAAGAGATCTCCAAGAAGCCATGTCTAGGAAATGCTTGGCCACAGGGATTCCTGGAATGAGGCATCTTCCTACAAAGAACAGAAGAGAAGCATGGGGACTAGAAAAAGAGGTTCACAATTTGATACTCCAAGTTGTGAAGCAGAGAGCGGAAGGTGCATCTGAGAATGACATGTTGCAAATGGTTCTTGAGGGTGCCAAATACAGTGACCTAAGCCAAGTGGAAACTGATCGGTTCATTGTTGATAACTGCAAGAACATCTACTTGGCTGGTTATGAGACCACTGCAGTCTCTGCCACATGGTTGCTCTTGTTGTTGGCTTCAAATCAAGAATGGCAAGAACGCGTCCGCGCCGAGGTTCTTCAAGTTTGTGGAGGCCAGATTCCAGATGCTGACATGCTCCGTAAGATGAAACAGCTAACAATGGTAATTCATGAATCGTTGCGTCTCTATCCACCGGTGTCTGTGGTATCAAGGGAGGCCTTCAAGGACATGAAATTTGGGGGCATATTTGTTCCCAAGGGTGTGAACCTATGGGTTATGGTACTGACATTGCACACTGACCCTGAAGTATGGGGACCAGATGCCTACAAGTTCAACCCAGAAAGATTTGCAAATGGAATTACCGGGGCTTGTAAGCTTCCTCACTTGTACATGCCATTTGGGGTTGGACCAAGAGTGTGTCTTGGGCAGAACTTGGCCATGATTGAGCTCAAAATACTAGTAGCTCTTATTCTCTCAAAATTTTCTTTCTCCCTATCTTCCAAGTATTGCCACAAACCAGCAATAAGGTTGGTCATTGAGCCTGAGCAGGGAGTCAATCTCTTAGTGAAGAAGTTGTGA

Protein Analysis

472

Amino Acids

53.09

Weight (kDa)

8.97

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 114 - 452 4.6e-72 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 767
AccBSI CCGCTC 1 cut(s) 722
AccII CGCG 2 cut(s) 918, 924
AciI CCGC 3 cut(s) 134, 722, 922
AcoI YGGCCR 2 cut(s) 612, 1272
AcsI RAATTY 2 cut(s) 1070, 1316
AcuI CTGAAG 2 cut(s) 360, 1161
AfaI GTAC 2 cut(s) 1119, 1226
AfiI CCNNNNNNNGG 3 cut(s) 600, 928, 1385
AflIII ACRYGT 2 cut(s) 744, 916
AgeI ACCGGT 1 cut(s) 1030
AgsI TTSAA 6 cut(s) 263, 295, 897, 938, 1060, 1171
AhlI ACTAGT 1 cut(s) 1294
AjnI CCWGG 2 cut(s) 45, 625
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AluBI AGCT 8 cut(s) 97, 344, 501, 527, 991, 1213, 1285, 1301
AluI AGCT 8 cut(s) 97, 344, 501, 527, 991, 1213, 1285, 1301
Alw21I GWGCWC 1 cut(s) 1287
Alw26I GTCTC 3 cut(s) 845, 868, 1025
AlwNI CAGNNNCTG 3 cut(s) 413, 866, 965
Ama87I CYCGRG 1 cut(s) 505
AoxI GGCC 4 cut(s) 612, 949, 1053, 1272
ApeKI GCWGC 1 cut(s) 239
ApoI RAATTY 2 cut(s) 1070, 1316
ArsI GACNNNNNNTTYG 2 cut(s) 1055, 1087
AsiGI ACCGGT 1 cut(s) 1030
AspLEI GCGC 1 cut(s) 926
AspS9I GGNCC 3 cut(s) 131, 1151, 1244
AsuC2I CCSGG 1 cut(s) 1201
AsuHPI GGTGA 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 505
AvaII GGWCC 3 cut(s) 131, 1151, 1244
AxyI CCTNAGG 1 cut(s) 110
BalI TGGCCA 2 cut(s) 614, 1274
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 1 cut(s) 1287
Bbv12I GWGCWC 1 cut(s) 1287
BbvI GCAGC 1 cut(s) 226
BcgI CGANNNNNNTGC 2 cut(s) 406, 440
BciT130I CCWGG 2 cut(s) 47, 627
BcnI CCSGG 1 cut(s) 1201
BcoDI GTCTC 3 cut(s) 845, 868, 1025
BcuI ACTAGT 1 cut(s) 1294
BfaI CTAG 5 cut(s) 221, 345, 600, 674, 1295
BfmI CTRYAG 1 cut(s) 858
BglII AGATCT 1 cut(s) 580
BisI GCNGC 1 cut(s) 240
BlsI GCNGC 1 cut(s) 241
Bme1390I CCNGG 3 cut(s) 47, 627, 1201
Bme18I GGWCC 3 cut(s) 131, 1151, 1244
BmeT110I CYCGRG 1 cut(s) 505
BmgT120I GGNCC 3 cut(s) 131, 1151, 1244
BmiI GGNNCC 3 cut(s) 6, 769, 1152
BmrFI CCNGG 3 cut(s) 47, 627, 1201
BmsI GCATC 4 cut(s) 646, 740, 952, 1147
BplI GAGNNNNNCTC 2 cut(s) 1380, 1412
Bpu10I CCTNAGC 2 cut(s) 785, 1380
BpuEI CTTGAG 2 cut(s) 505, 782
BpuMI CCSGG 1 cut(s) 1201
BsaI GGTCTC 1 cut(s) 845
BsaJI CCNNGG 6 cut(s) 46, 75, 304, 927, 1092, 1200
BsaWI WCCGGW 1 cut(s) 1030
Bsc4I CCNNNNNNNGG 3 cut(s) 600, 928, 1385
Bse118I RCCGGY 1 cut(s) 1030
Bse1I ACTGG 1 cut(s) 549
Bse21I CCTNAGG 1 cut(s) 110
Bse3DI GCAATG 3 cut(s) 32, 422, 1124
BseBI CCWGG 2 cut(s) 47, 627
BseDI CCNNGG 6 cut(s) 46, 75, 304, 927, 1092, 1200
BseGI GGATG 1 cut(s) 396
BseLI CCNNNNNNNGG 3 cut(s) 600, 928, 1385
BseMI GCAATG 3 cut(s) 32, 422, 1124
BseMII CTCAG 3 cut(s) 101, 726, 1371
BseNI ACTGG 1 cut(s) 549
BseRI GAGGAG 1 cut(s) 127
BseXI GCAGC 1 cut(s) 226
Bsh1236I CGCG 2 cut(s) 918, 924
BshFI GGCC 4 cut(s) 614, 951, 1055, 1274
BshNI GGYRCC 1 cut(s) 767
BshTI ACCGGT 1 cut(s) 1030
BsiHKAI GWGCWC 1 cut(s) 1287
BsiHKCI CYCGRG 1 cut(s) 505
BsiSI CCGG 3 cut(s) 89, 1031, 1200
BslFI GGGAC 3 cut(s) 172, 684, 1164
BslI CCNNNNNNNGG 3 cut(s) 600, 928, 1385
BsmAI GTCTC 3 cut(s) 845, 868, 1025
BsmBI CGTCTC 1 cut(s) 1025
BsmFI GGGAC 3 cut(s) 172, 684, 1164
BsnI GGCC 4 cut(s) 614, 951, 1055, 1274
Bso31I GGTCTC 1 cut(s) 845
BsoBI CYCGRG 1 cut(s) 505
Bsp1286I GDGCHC 1 cut(s) 1287
Bsp1407I TGTACA 1 cut(s) 1224
Bsp143I GATC 5 cut(s) 101, 168, 561, 580, 802
BspACI CCGC 3 cut(s) 134, 722, 922
BspANI GGCC 4 cut(s) 614, 951, 1055, 1274
BspCNI CTCAG 3 cut(s) 102, 727, 1372
BspFNI CGCG 2 cut(s) 918, 924
BspHI TCATGA 1 cut(s) 1006
BspLI GGNNCC 3 cut(s) 6, 769, 1152
BspMAI CTGCAG 1 cut(s) 862
BspT107I GGYRCC 1 cut(s) 767
BspTNI GGTCTC 1 cut(s) 845
BsrBI CCGCTC 1 cut(s) 722
BsrDI GCAATG 3 cut(s) 32, 422, 1124
BsrFI RCCGGY 1 cut(s) 1030
BsrGI TGTACA 1 cut(s) 1224
BsrI ACTGG 1 cut(s) 549
BssAI RCCGGY 1 cut(s) 1030
BssECI CCNNGG 6 cut(s) 46, 75, 304, 927, 1092, 1200
BssMI GATC 5 cut(s) 101, 168, 561, 580, 802
BssT1I CCWWGG 3 cut(s) 75, 304, 1092
Bst2UI CCWGG 2 cut(s) 47, 627
Bst4CI ACNGT 1 cut(s) 779
Bst6I CTCTTC 2 cut(s) 450, 652
BstAPI GCANNNNNTGC 2 cut(s) 38, 866
BstAUI TGTACA 1 cut(s) 1224
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 7 cut(s) 98, 110, 575, 735, 785, 1380, 1399
BstF5I GGATG 1 cut(s) 396
BstFNI CGCG 2 cut(s) 918, 924
BstHHI GCGC 1 cut(s) 926
BstKTI GATC 5 cut(s) 104, 171, 564, 583, 805
BstMAI GTCTC 3 cut(s) 845, 868, 1025
BstMBI GATC 5 cut(s) 101, 168, 561, 580, 802
BstMWI GCNNNNNNNGC 4 cut(s) 38, 94, 728, 866
BstNI CCWGG 2 cut(s) 47, 627
BstNSI RCATGY 3 cut(s) 748, 973, 1231
BstSCI CCNGG 3 cut(s) 45, 625, 1199
BstSFI CTRYAG 1 cut(s) 858
BstUI CGCG 2 cut(s) 918, 924
BstV1I GCAGC 1 cut(s) 226
BstX2I RGATCY 1 cut(s) 580
BstYI RGATCY 1 cut(s) 580
Bsu36I CCTNAGG 1 cut(s) 110
BsuRI GGCC 4 cut(s) 614, 951, 1055, 1274
BtsCI GGATG 1 cut(s) 396
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 4 cut(s) 556, 784, 855, 1131
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 3 cut(s) 413, 866, 965
CciI TCATGA 1 cut(s) 1006
CfoI GCGC 1 cut(s) 926
Cfr10I RCCGGY 1 cut(s) 1030
Cfr13I GGNCC 3 cut(s) 131, 1151, 1244
CseI GACGC 2 cut(s) 907, 1007
Csp6I GTAC 2 cut(s) 1118, 1225
CspAI ACCGGT 1 cut(s) 1030
CviQI GTAC 2 cut(s) 1118, 1225
DdeI CTNAG 7 cut(s) 98, 110, 575, 735, 785, 1380, 1399
DpnI GATC 5 cut(s) 103, 170, 563, 582, 804
DpnII GATC 5 cut(s) 101, 168, 561, 580, 802
EaeI YGGCCR 2 cut(s) 612, 1272
Eam1104I CTCTTC 2 cut(s) 450, 652
EarI CTCTTC 2 cut(s) 450, 652
Ecl136II GAGCTC 1 cut(s) 1285
Eco130I CCWWGG 3 cut(s) 75, 304, 1092
Eco147I AGGCCT 1 cut(s) 1055
Eco24I GRGCYC 1 cut(s) 1287
Eco31I GGTCTC 1 cut(s) 845
Eco32I GATATC 1 cut(s) 475
Eco47I GGWCC 3 cut(s) 131, 1151, 1244
Eco53kI GAGCTC 1 cut(s) 1285
Eco57I CTGAAG 2 cut(s) 360, 1161
Eco81I CCTNAGG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 505
EcoICRI GAGCTC 1 cut(s) 1285
EcoRII CCWGG 2 cut(s) 45, 625
EcoRV GATATC 1 cut(s) 475
EcoT14I CCWWGG 3 cut(s) 75, 304, 1092
EcoT38I GRGCYC 1 cut(s) 1287
ErhI CCWWGG 3 cut(s) 75, 304, 1092
Esp3I CGTCTC 1 cut(s) 1025
FaqI GGGAC 3 cut(s) 172, 684, 1164
Fnu4HI GCNGC 1 cut(s) 240
FokI GGATG 1 cut(s) 403
FriOI GRGCYC 1 cut(s) 1287
Fsp4HI GCNGC 1 cut(s) 240
FspBI CTAG 5 cut(s) 221, 345, 600, 674, 1295
GlaI GCGC 1 cut(s) 925
GluI GCNGC 1 cut(s) 240
HaeIII GGCC 4 cut(s) 614, 951, 1055, 1274
HapII CCGG 3 cut(s) 89, 1031, 1200
HgaI GACGC 2 cut(s) 907, 1007
HhaI GCGC 1 cut(s) 926
Hin6I GCGC 1 cut(s) 924
HinP1I GCGC 1 cut(s) 924
HindIII AAGCTT 2 cut(s) 499, 1211
HinfI GANTC 7 cut(s) 335, 410, 431, 622, 955, 1010, 1389
HpaII CCGG 3 cut(s) 89, 1031, 1200
HphI GGTGA 1 cut(s) 91
Hpy166II GTNNAC 2 cut(s) 688, 1102
Hpy188I TCNGA 3 cut(s) 155, 340, 736
Hpy188III TCNNGA 8 cut(s) 109, 172, 507, 522, 761, 902, 959, 1007
Hpy8I GTNNAC 2 cut(s) 688, 1102
HpyAV CCTTC 5 cut(s) 154, 169, 265, 719, 1066
HpyCH4III ACNGT 1 cut(s) 779
HpyCH4V TGCA 8 cut(s) 32, 427, 731, 751, 825, 860, 1129, 1187
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 94, 728, 866
HpyF3I CTNAG 7 cut(s) 98, 110, 575, 735, 785, 1380, 1399
HspAI GCGC 1 cut(s) 924
Kzo9I GATC 5 cut(s) 101, 168, 561, 580, 802
LmnI GCTCC 3 cut(s) 4, 364, 978
Lsp1109I GCAGC 1 cut(s) 226
LweI GCATC 4 cut(s) 646, 740, 952, 1147
MaeI CTAG 5 cut(s) 221, 345, 600, 674, 1295
MaeIII GTNAC 1 cut(s) 779
MalI GATC 5 cut(s) 103, 170, 563, 582, 804
MbiI CCGCTC 1 cut(s) 722
MboI GATC 5 cut(s) 101, 168, 561, 580, 802
MboII GAAGA 6 cut(s) 275, 467, 632, 669, 926, 1326
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 1 cut(s) 1287
MlsI TGGCCA 2 cut(s) 614, 1274
MluCI AATT 6 cut(s) 365, 691, 1002, 1070, 1194, 1316
MluI ACGCGT 1 cut(s) 916
MluNI TGGCCA 2 cut(s) 614, 1274
MlyI GAGTC 3 cut(s) 419, 440, 1398
MmeI TCCRAC 3 cut(s) 109, 164, 1222
Mox20I TGGCCA 2 cut(s) 614, 1274
MscI TGGCCA 2 cut(s) 614, 1274
MseI TTAA 1 cut(s) 384
Msp20I TGGCCA 2 cut(s) 614, 1274
MspI CCGG 3 cut(s) 89, 1031, 1200
MspR9I CCNGG 3 cut(s) 47, 627, 1201
MvaI CCWGG 2 cut(s) 47, 627
MvnI CGCG 2 cut(s) 918, 924
MwoI GCNNNNNNNGC 4 cut(s) 38, 94, 728, 866
NciI CCSGG 1 cut(s) 1201
NdeII GATC 5 cut(s) 101, 168, 561, 580, 802
NlaIV GGNNCC 3 cut(s) 6, 769, 1152
NmeAIII GCCGAG 1 cut(s) 952
NmuCI GTSAC 1 cut(s) 779
NspI RCATGY 3 cut(s) 748, 973, 1231
PagI TCATGA 1 cut(s) 1006
PceI AGGCCT 1 cut(s) 1055
PciI ACATGT 1 cut(s) 744
PfeI GAWTC 4 cut(s) 335, 622, 955, 1010
PfoI TCCNGGA 1 cut(s) 625
PinAI ACCGGT 1 cut(s) 1030
PkrI GCNGC 1 cut(s) 241
PleI GAGTC 3 cut(s) 418, 439, 1397
PpsI GAGTC 3 cut(s) 418, 439, 1397
PscI ACATGT 1 cut(s) 744
Psp124BI GAGCTC 1 cut(s) 1287
Psp6I CCWGG 2 cut(s) 45, 625
PspGI CCWGG 2 cut(s) 45, 625
PspN4I GGNNCC 3 cut(s) 6, 769, 1152
PspPI GGNCC 3 cut(s) 131, 1151, 1244
PstI CTGCAG 1 cut(s) 862
PstNI CAGNNNCTG 3 cut(s) 413, 866, 965
PsuI RGATCY 1 cut(s) 580
RsaI GTAC 2 cut(s) 1119, 1226
RsaNI GTAC 2 cut(s) 1118, 1225
SacI GAGCTC 1 cut(s) 1287
SaqAI TTAA 1 cut(s) 384
SatI GCNGC 1 cut(s) 240
Sau3AI GATC 5 cut(s) 101, 168, 561, 580, 802
Sau96I GGNCC 3 cut(s) 131, 1151, 1244
SchI GAGTC 3 cut(s) 419, 440, 1398
ScrFI CCNGG 3 cut(s) 47, 627, 1201
SduI GDGCHC 1 cut(s) 1287
SfaNI GCATC 4 cut(s) 646, 740, 952, 1147
SfcI CTRYAG 1 cut(s) 858
SgrAI CRCCGGYG 1 cut(s) 1030
SinI GGWCC 3 cut(s) 131, 1151, 1244
SmlI CTYRAG 2 cut(s) 520, 761
SmoI CTYRAG 2 cut(s) 520, 761
SpeI ACTAGT 1 cut(s) 1294
Sse9I AATT 6 cut(s) 365, 691, 1002, 1070, 1194, 1316
SseBI AGGCCT 1 cut(s) 1055
SsiI CCGC 3 cut(s) 134, 722, 922
SspI AATATT 2 cut(s) 321, 481
SspMI CTAG 5 cut(s) 221, 345, 600, 674, 1295
SstI GAGCTC 1 cut(s) 1287
StuI AGGCCT 1 cut(s) 1055
StyD4I CCNGG 3 cut(s) 45, 625, 1199
StyI CCWWGG 3 cut(s) 75, 304, 1092
TaaI ACNGT 1 cut(s) 779
TasI AATT 6 cut(s) 365, 691, 1002, 1070, 1194, 1316
TatI WGTACW 1 cut(s) 1224
TfiI GAWTC 4 cut(s) 335, 622, 955, 1010
Tru1I TTAA 1 cut(s) 384
Tru9I TTAA 1 cut(s) 384
TscAI CASTG 4 cut(s) 556, 784, 862, 1138
TseFI GTSAC 1 cut(s) 779
TseI GCWGC 1 cut(s) 239
Tsp45I GTSAC 1 cut(s) 779
TspDTI ATGAA 9 cut(s) 10, 98, 348, 468, 799, 995, 998, 1023, 1082
TspGWI ACGGA 1 cut(s) 965
TspRI CASTG 4 cut(s) 556, 784, 862, 1138
VpaK11BI GGWCC 3 cut(s) 131, 1151, 1244
XapI RAATTY 2 cut(s) 1070, 1316
XceI RCATGY 3 cut(s) 748, 973, 1231
XspI CTAG 5 cut(s) 221, 345, 600, 674, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.