Rmu_sc0012303.1_g000003

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012303.1
Physical Location & Seq
Reverse (-)
5559 .. 7765
2207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012303.1_g000003.1.cds

Sequence Viewer

Length: 1524 bp
atgttaatgtctctggctatgcttggagtcatagggttattagtacgtctgtataaagggcttgtggtgaagccgaagaggctgcggtccctgataaccaagcaaggcatcagcggtccctcgccagcttttctcctgggaaatatcttggacattaagaaggctcgtccaagcagcattactaaggctccgacaagcgaaccccccacctcccacaactgtgctgctgttctcttccccttttttgagcagtggaggaagcaatatggtgaagtgtttgtgtttgcactcggcaacacacaggtactatatgtgaacaaacctgaggcagtgaaggatattaccacatgcacatcctgggacttggggaagcctagttatcagtataaagagcgccgtcccttacttggtcatggtattctaacctcgaacggtgcctcatgggctcatcagagaaaaatcattgctcctgaactatacatgcagaaagttaagggaatgatcaaattaatcacagagtctacaattgctctggtaaattcatggaacagtaagattgaggcacagggaggaattgcagacataaaaatggaccactatatgagaagtttctctggtgatgttatctcaagggcgtgtttcggaagcaactatttgaaaggcgaagagatatttcagaaactaaccgatctccaagaggccatggccaggaaacttttcttgaccggaatacctggattgagacaccttccaacaaagagtaatagggaagcttgggcattagagaaggaggctgcaactttgatactacgggtagtgaaggagagacaggctgcggggtacgagaaagacctattgcaaatgattcttgagggggctaaaaacagtgaccttagccaggaggcaacagaccgtttcattgtcgataactgcaaaaacatttacttggctggatatgaaaccacagcagtttctgccacatggtgcctcatgttgttggctttgaatcaagaatggcaagaacgtgtcagagcggaggttcttcaagtttgtgagggccgaattccagatgctgatatgctccttaagatgaaacagctaacaatggtgattcatgaatcgttgcgcctttatcccccaaacactgtggtgtcaagggaggctctcaaggacttgaaatttggagacattcatgtgccaaagggtgtcaatgtttggacagatgtagtaaccctacacaccgatcctgaaatatggggaccggattcctacacattcaaccccgagcgattttccaatgggatctctggtgcctgcaagcttccctacttgtacatgccgtttgggattggaccacgaatatgtcttggacagaactttgcaatggttgaactcaagattctgatagctctcatactctccaacttctccttctcactatctcccaagtacatccacaagccttctcttaagttggttattgaaccagaacacggagttgatctcttggtaaaaaagctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

507

Amino Acids

56.9

Weight (kDa)

9.18

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 434, 984, 1310
AccBSI CCGCTC 1 cut(s) 1034
AccI GTMKAC 1 cut(s) 521
AciI CCGC 4 cut(s) 85, 114, 836, 1034
AclWI GGATC 2 cut(s) 1238, 1310
AcoI YGGCCR 1 cut(s) 705
AcsI RAATTY 3 cut(s) 538, 1062, 1178
AdeI CACNNNGTG 1 cut(s) 984
AfaI GTAC 5 cut(s) 45, 306, 842, 1334, 1451
AfiI CCNNNNNNNGG 4 cut(s) 407, 708, 898, 1493
AflII CTTAAG 2 cut(s) 1085, 1469
AflIII ACRYGT 1 cut(s) 1024
AgsI TTSAA 7 cut(s) 658, 1006, 1046, 1177, 1279, 1391, 1484
AjnI CCWGG 5 cut(s) 135, 356, 707, 733, 897
AjuI GAANNNNNNNTTGG 2 cut(s) 1415, 1447
AleI CACNNNNGTG 2 cut(s) 219, 1148
AluBI AGCT 6 cut(s) 128, 773, 1099, 1321, 1409, 1519
AluI AGCT 6 cut(s) 128, 773, 1099, 1321, 1409, 1519
Alw26I GTCTC 4 cut(s) 15, 736, 820, 1179
AlwI GGATC 2 cut(s) 1238, 1310
AlwNI CAGNNNCTG 2 cut(s) 974, 1073
Ama87I CYCGRG 1 cut(s) 1283
AoxI GGCC 3 cut(s) 699, 705, 1057
ApeKI GCWGC 5 cut(s) 82, 174, 224, 794, 833
ApoI RAATTY 3 cut(s) 538, 1062, 1178
ArsI GACNNNNNNTTYG 2 cut(s) 1163, 1195
AseI ATTAAT 1 cut(s) 509
Asp700I GAANNNNTTC 1 cut(s) 716
AspLEI GCGC 2 cut(s) 396, 1128
AspS9I GGNCC 6 cut(s) 87, 116, 592, 1057, 1259, 1352
AsuHPI GGTGA 4 cut(s) 79, 281, 629, 1120
AvaI CYCGRG 1 cut(s) 1283
AvaII GGWCC 5 cut(s) 87, 116, 592, 1259, 1352
AxyI CCTNAGG 1 cut(s) 324
BalI TGGCCA 1 cut(s) 707
BanI GGYRCC 3 cut(s) 434, 984, 1310
BanII GRGCYC 1 cut(s) 448
BbvI GCAGC 5 cut(s) 69, 186, 211, 781, 820
BceAI ACGGC 2 cut(s) 381, 1324
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BciT130I CCWGG 5 cut(s) 137, 358, 709, 735, 899
BclI TGATCA 1 cut(s) 501
BcoDI GTCTC 4 cut(s) 15, 736, 820, 1179
BfaI CTAG 1 cut(s) 375
BfoI RGCGCY 1 cut(s) 397
BfrI CTTAAG 2 cut(s) 1085, 1469
BglI GCCNNNNNGGC 2 cut(s) 79, 443
BisI GCNGC 5 cut(s) 83, 175, 225, 795, 834
BlsI GCNGC 5 cut(s) 84, 176, 226, 796, 835
Bme1390I CCNGG 5 cut(s) 137, 358, 709, 735, 899
Bme18I GGWCC 5 cut(s) 87, 116, 592, 1259, 1352
BmeT110I CYCGRG 1 cut(s) 1283
BmgT120I GGNCC 6 cut(s) 87, 116, 592, 1057, 1259, 1352
BmiI GGNNCC 7 cut(s) 89, 118, 189, 436, 986, 1260, 1312
BmrFI CCNGG 5 cut(s) 137, 358, 709, 735, 899
BmsI GCATC 2 cut(s) 117, 1060
BplI GAGNNNNNCTC 2 cut(s) 1488, 1520
Bpu10I CCTNAGC 1 cut(s) 893
BpuEI CTTGAG 4 cut(s) 613, 890, 1151, 1379
BsaJI CCNNGG 3 cut(s) 136, 357, 702
BsaWI WCCGGW 2 cut(s) 725, 1261
BsaXI ACNNNNNCTCC 2 cut(s) 172, 202
Bsc4I CCNNNNNNNGG 4 cut(s) 407, 708, 898, 1493
Bse21I CCTNAGG 1 cut(s) 324
Bse3DI GCAATG 2 cut(s) 462, 1389
BseBI CCWGG 5 cut(s) 137, 358, 709, 735, 899
BseDI CCNNGG 3 cut(s) 136, 357, 702
BseGI GGATG 2 cut(s) 353, 1452
BseLI CCNNNNNNNGG 4 cut(s) 407, 708, 898, 1493
BseMI GCAATG 2 cut(s) 462, 1389
BseMII CTCAG 1 cut(s) 315
BseXI GCAGC 5 cut(s) 69, 186, 211, 781, 820
BshFI GGCC 3 cut(s) 701, 707, 1059
BshNI GGYRCC 3 cut(s) 434, 984, 1310
BsiHKCI CYCGRG 1 cut(s) 1283
BsiSI CCGG 2 cut(s) 726, 1262
BslFI GGGAC 5 cut(s) 73, 102, 374, 384, 1272
BslI CCNNNNNNNGG 4 cut(s) 407, 708, 898, 1493
BsmAI GTCTC 4 cut(s) 15, 736, 820, 1179
BsmFI GGGAC 5 cut(s) 73, 102, 374, 384, 1272
BsnI GGCC 3 cut(s) 701, 707, 1059
BsoBI CYCGRG 1 cut(s) 1283
Bsp1286I GDGCHC 1 cut(s) 448
Bsp1407I TGTACA 1 cut(s) 1332
Bsp143I GATC 5 cut(s) 501, 688, 1243, 1302, 1501
Bsp19I CCATGG 1 cut(s) 702
BspACI CCGC 4 cut(s) 85, 114, 836, 1034
BspANI GGCC 3 cut(s) 701, 707, 1059
BspCNI CTCAG 1 cut(s) 316
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 7 cut(s) 89, 118, 189, 436, 986, 1260, 1312
BspPI GGATC 2 cut(s) 1238, 1310
BspT107I GGYRCC 3 cut(s) 434, 984, 1310
BspTI CTTAAG 2 cut(s) 1085, 1469
BsrBI CCGCTC 1 cut(s) 1034
BsrDI GCAATG 2 cut(s) 462, 1389
BsrGI TGTACA 1 cut(s) 1332
BssECI CCNNGG 3 cut(s) 136, 357, 702
BssMI GATC 5 cut(s) 501, 688, 1243, 1302, 1501
BssT1I CCWWGG 1 cut(s) 702
Bst2UI CCWGG 5 cut(s) 137, 358, 709, 735, 899
Bst4CI ACNGT 6 cut(s) 221, 434, 551, 887, 914, 1147
Bst6I CTCTTC 3 cut(s) 71, 239, 660
BstAFI CTTAAG 2 cut(s) 1085, 1469
BstAPI GCANNNNNTGC 1 cut(s) 974
BstAUI TGTACA 1 cut(s) 1332
BstC8I GCNNGC 3 cut(s) 126, 1315, 1319
BstDEI CTNAG 3 cut(s) 183, 324, 893
BstDSI CCRYGG 1 cut(s) 702
BstENI CCTNNNNNAGG 1 cut(s) 896
BstF5I GGATG 2 cut(s) 353, 1452
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 2 cut(s) 396, 1128
BstKTI GATC 5 cut(s) 504, 691, 1246, 1305, 1504
BstMAI GTCTC 4 cut(s) 15, 736, 820, 1179
BstMBI GATC 5 cut(s) 501, 688, 1243, 1302, 1501
BstMWI GCNNNNNNNGC 3 cut(s) 79, 443, 974
BstNI CCWGG 5 cut(s) 137, 358, 709, 735, 899
BstNSI RCATGY 3 cut(s) 351, 484, 1339
BstSCI CCNGG 5 cut(s) 135, 356, 707, 733, 897
BstV1I GCAGC 5 cut(s) 69, 186, 211, 781, 820
BstX2I RGATCY 1 cut(s) 1302
BstYI RGATCY 1 cut(s) 1302
Bsu36I CCTNAGG 1 cut(s) 324
BsuRI GGCC 3 cut(s) 701, 707, 1059
BtgI CCRYGG 1 cut(s) 702
BtsCI GGATG 2 cut(s) 353, 1452
BtsI GCAGTG 2 cut(s) 257, 336
BtsIMutI CAGTG 4 cut(s) 257, 336, 892, 1143
Cac8I GCNNGC 3 cut(s) 126, 1315, 1319
CaiI CAGNNNCTG 2 cut(s) 974, 1073
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 2 cut(s) 396, 1128
Cfr13I GGNCC 6 cut(s) 87, 116, 592, 1057, 1259, 1352
Csp6I GTAC 5 cut(s) 44, 305, 841, 1333, 1450
CspCI CAANNNNNGTGG 2 cut(s) 1128, 1163
CviQI GTAC 5 cut(s) 44, 305, 841, 1333, 1450
DdeI CTNAG 3 cut(s) 183, 324, 893
DpnI GATC 5 cut(s) 503, 690, 1245, 1304, 1503
DpnII GATC 5 cut(s) 501, 688, 1243, 1302, 1501
DraIII CACNNNGTG 1 cut(s) 984
EaeI YGGCCR 1 cut(s) 705
Eam1104I CTCTTC 3 cut(s) 71, 239, 660
EarI CTCTTC 3 cut(s) 71, 239, 660
Eco130I CCWWGG 1 cut(s) 702
Eco24I GRGCYC 1 cut(s) 448
Eco47I GGWCC 5 cut(s) 87, 116, 592, 1259, 1352
Eco81I CCTNAGG 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 1283
EcoNI CCTNNNNNAGG 1 cut(s) 896
EcoRI GAATTC 1 cut(s) 1062
EcoRII CCWGG 5 cut(s) 135, 356, 707, 733, 897
EcoT14I CCWWGG 1 cut(s) 702
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 1 cut(s) 702
FaqI GGGAC 5 cut(s) 73, 102, 374, 384, 1272
FauI CCCGC 1 cut(s) 829
FbaI TGATCA 1 cut(s) 501
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 5 cut(s) 83, 175, 225, 795, 834
FokI GGATG 2 cut(s) 340, 1439
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 5 cut(s) 83, 175, 225, 795, 834
FspBI CTAG 1 cut(s) 375
GlaI GCGC 2 cut(s) 395, 1127
GluI GCNGC 5 cut(s) 83, 175, 225, 795, 834
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 3 cut(s) 701, 707, 1059
HapII CCGG 2 cut(s) 726, 1262
HhaI GCGC 2 cut(s) 396, 1128
Hin6I GCGC 2 cut(s) 394, 1126
HinP1I GCGC 2 cut(s) 394, 1126
HindIII AAGCTT 2 cut(s) 771, 1319
HinfI GANTC 8 cut(s) 27, 518, 865, 1006, 1111, 1118, 1265, 1399
HpaII CCGG 2 cut(s) 726, 1262
HphI GGTGA 4 cut(s) 79, 281, 629, 1120
Hpy166II GTNNAC 2 cut(s) 316, 522
Hpy188I TCNGA 6 cut(s) 192, 453, 644, 678, 1031, 1404
Hpy188III TCNNGA 8 cut(s) 470, 721, 869, 1010, 1067, 1115, 1247, 1396
Hpy8I GTNNAC 2 cut(s) 316, 522
HpyAV CCTTC 7 cut(s) 154, 328, 758, 781, 814, 1441, 1473
HpyCH4III ACNGT 6 cut(s) 221, 434, 551, 887, 914, 1147
HpyCH4IV ACGT 2 cut(s) 46, 1024
HpyCH4V TGCA 9 cut(s) 287, 351, 484, 578, 797, 859, 933, 1317, 1382
HpyF10VI GCNNNNNNNGC 3 cut(s) 79, 443, 974
HpyF3I CTNAG 3 cut(s) 183, 324, 893
HpySE526I ACGT 2 cut(s) 46, 1024
HspAI GCGC 2 cut(s) 394, 1126
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 5 cut(s) 501, 688, 1243, 1302, 1501
LmnI GCTCC 3 cut(s) 193, 472, 1086
Lsp1109I GCAGC 5 cut(s) 69, 186, 211, 781, 820
LweI GCATC 2 cut(s) 117, 1060
MaeI CTAG 1 cut(s) 375
MaeII ACGT 2 cut(s) 46, 1024
MaeIII GTNAC 2 cut(s) 887, 1228
MalI GATC 5 cut(s) 503, 690, 1245, 1304, 1503
MbiI CCGCTC 1 cut(s) 1034
MboI GATC 5 cut(s) 501, 688, 1243, 1302, 1501
MboII GAAGA 4 cut(s) 88, 226, 677, 1034
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 1 cut(s) 1302
MhlI GDGCHC 1 cut(s) 448
MlsI TGGCCA 1 cut(s) 707
MluCI AATT 6 cut(s) 506, 525, 538, 573, 1062, 1178
MluNI TGGCCA 1 cut(s) 707
MlyI GAGTC 2 cut(s) 36, 527
MmeI TCCRAC 3 cut(s) 215, 776, 1446
Mox20I TGGCCA 1 cut(s) 707
MroXI GAANNNNTTC 1 cut(s) 716
MscI TGGCCA 1 cut(s) 707
MseI TTAA 6 cut(s) 5, 156, 492, 509, 1086, 1470
MslI CAYNNNNRTG 5 cut(s) 219, 587, 1148, 1193, 1360
Msp20I TGGCCA 1 cut(s) 707
MspA1I CMGCKG 1 cut(s) 114
MspCI CTTAAG 2 cut(s) 1085, 1469
MspI CCGG 2 cut(s) 726, 1262
MspR9I CCNGG 5 cut(s) 137, 358, 709, 735, 899
MunI CAATTG 1 cut(s) 525
MvaI CCWGG 5 cut(s) 137, 358, 709, 735, 899
MwoI GCNNNNNNNGC 3 cut(s) 79, 443, 974
NcoI CCATGG 1 cut(s) 702
NdeII GATC 5 cut(s) 501, 688, 1243, 1302, 1501
NlaIV GGNNCC 7 cut(s) 89, 118, 189, 436, 986, 1260, 1312
NmeAIII GCCGAG 1 cut(s) 270
NmuCI GTSAC 1 cut(s) 887
NspI RCATGY 3 cut(s) 351, 484, 1339
OliI CACNNNNGTG 2 cut(s) 219, 1148
PagI TCATGA 1 cut(s) 1114
PdmI GAANNNNTTC 1 cut(s) 716
PfeI GAWTC 6 cut(s) 865, 1006, 1111, 1118, 1265, 1399
PkrI GCNGC 5 cut(s) 84, 176, 226, 796, 835
PleI GAGTC 2 cut(s) 35, 526
PpsI GAGTC 2 cut(s) 35, 526
PshBI ATTAAT 1 cut(s) 509
Psp6I CCWGG 5 cut(s) 135, 356, 707, 733, 897
PspGI CCWGG 5 cut(s) 135, 356, 707, 733, 897
PspN4I GGNNCC 7 cut(s) 89, 118, 189, 436, 986, 1260, 1312
PspPI GGNCC 6 cut(s) 87, 116, 592, 1057, 1259, 1352
PstNI CAGNNNCTG 2 cut(s) 974, 1073
PsuI RGATCY 1 cut(s) 1302
RsaI GTAC 5 cut(s) 45, 306, 842, 1334, 1451
RsaNI GTAC 5 cut(s) 44, 305, 841, 1333, 1450
RseI CAYNNNNRTG 5 cut(s) 219, 587, 1148, 1193, 1360
SaqAI TTAA 6 cut(s) 5, 156, 492, 509, 1086, 1470
SatI GCNGC 5 cut(s) 83, 175, 225, 795, 834
Sau3AI GATC 5 cut(s) 501, 688, 1243, 1302, 1501
Sau96I GGNCC 6 cut(s) 87, 116, 592, 1057, 1259, 1352
SchI GAGTC 2 cut(s) 36, 527
ScrFI CCNGG 5 cut(s) 137, 358, 709, 735, 899
SduI GDGCHC 1 cut(s) 448
SfaNI GCATC 2 cut(s) 117, 1060
SinI GGWCC 5 cut(s) 87, 116, 592, 1259, 1352
SmiMI CAYNNNNRTG 5 cut(s) 219, 587, 1148, 1193, 1360
SmlI CTYRAG 6 cut(s) 628, 869, 1085, 1166, 1394, 1469
SmoI CTYRAG 6 cut(s) 628, 869, 1085, 1166, 1394, 1469
Sse9I AATT 6 cut(s) 506, 525, 538, 573, 1062, 1178
SsiI CCGC 4 cut(s) 85, 114, 836, 1034
SspMI CTAG 1 cut(s) 375
StyD4I CCNGG 5 cut(s) 135, 356, 707, 733, 897
StyI CCWWGG 1 cut(s) 702
TaaI ACNGT 6 cut(s) 221, 434, 551, 887, 914, 1147
TaiI ACGT 2 cut(s) 49, 1027
TaqI TCGA 2 cut(s) 428, 924
TasI AATT 6 cut(s) 506, 525, 538, 573, 1062, 1178
TatI WGTACW 2 cut(s) 1332, 1449
TfiI GAWTC 6 cut(s) 865, 1006, 1111, 1118, 1265, 1399
Tru1I TTAA 6 cut(s) 5, 156, 492, 509, 1086, 1470
Tru9I TTAA 6 cut(s) 5, 156, 492, 509, 1086, 1470
TscAI CASTG 4 cut(s) 257, 336, 892, 1150
TseFI GTSAC 1 cut(s) 887
TseI GCWGC 5 cut(s) 82, 174, 224, 794, 833
Tsp45I GTSAC 1 cut(s) 887
TspDTI ATGAA 7 cut(s) 531, 907, 972, 1103, 1106, 1131, 1181
TspGWI ACGGA 1 cut(s) 1509
TspRI CASTG 4 cut(s) 257, 336, 892, 1150
Vha464I CTTAAG 2 cut(s) 1085, 1469
VpaK11BI GGWCC 5 cut(s) 87, 116, 592, 1259, 1352
VspI ATTAAT 1 cut(s) 509
XagI CCTNNNNNAGG 1 cut(s) 896
XapI RAATTY 3 cut(s) 538, 1062, 1178
XceI RCATGY 3 cut(s) 351, 484, 1339
XmiI GTMKAC 1 cut(s) 521
XmnI GAANNNNTTC 1 cut(s) 716
XspI CTAG 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.