pycom14g14970

Serine threonine-protein kinase ATM-like isoform X1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
17650438 .. 17654187
3750 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g14970.2

Sequence Viewer

Length: 3543 bp
ATGGAGAGGCCAAAGACCCCAGAAACCCTAGAAGATCAAAACCCTAGTGGTAAAACCCTAGAAGGGGCATCTGAGTTGTTAGGGTGGAGTGAGAACTGTACTGGGTTGGAGTCATTTCCTGGAATTTTGGGAGGTAGTGGAGAAGGAGTTGGTGTTACCGGTAATGATGCGGCACTTGGTTATGTGGAAGGGGTGACTCAAGCGGTGGAAGCCAAGAAAGGAATCCTGGATGGTGATAAAGGAGAGGATTTGGGATTGTTGGGTATGGATGCAGTTTCTGGTATGTTTAATAGTTGCATGAATGGTGTTGGGGTTGAGGAGGCTTGTTGGCTTAATGGTGGGGTTGGTGGGGAAAATGGGGCTCAAATGGGCTCCCAAAGGTTGCCATCCGAAATAGGAAATGACATTCAGATTGATTTTGCGGAGCCACAGTCAGATGGGAACGGGAACTTAGAGGATTTGGGTGGTAATGAGAATGAAGAGGGTGGAGTTGATGTGGAAAGCGATGCTCAAATGGGTTCCCAACATTCCCTATCAGATAATGGAAATGACGTGCAGACGGATTTTGTGGAGCCACAGTCAGATGGGAACGGGAACTTTGAGGATTTGGGTGGTAATGATAATGAAGAGGGTGGAGTTGATGTGGAAAGCGATGCTCAAATGGGTTCCCAACGATTGCCATCAGATAAGGGAAATGACGTTCAGATGGATTTTGTGGAGCCACGGTCAGATGGGAACAGGAATCTCGGGAACTTAGAGGACTTGGGTGGTACTGATAATGAAGAGGATGGAGTTGAGAAGATAGCTGATGATGATGATGGTATGAATGAAGGAAAAGCATTGGGATTGAATGGGATTGACTCAGTTGGGGTTGACTCATCTAGCAAGAAGATAGAAGTTTCGGATGATGGTATATCACTGTTCGTGGATTTTAGTGGCCATCCACCAGATGATCTGCAGGTGGCAAGTTGTCCTGGATTTGCAGGTACAGAAACTGTAGAAGAATTTGGACATGATGAACAGGAGAAGGATTTTGATTATCAAGGCTATGGTTTTTTTGTGGGTGACATTGTATGGATTAAAACCAAAACCCAGACATGGTGGCCTGGTAAAATATATGATCGAGTAAATGCGTCAAAGTTTGGTGCCAGTGGGGATCCAGGGGGCTGTCTACTAGTTGGATATTTTGGGATGAGTCATGTAGCATGGTGCCATCCATACCAACTAAAACCTTTTCGTGAGTACTTTGAGCAGATGTCGGGGCAAAGCAAGGCTAGAATATTCCTTGGAGCTGTTGAGAAAGCACTCGAAGAGTTTGGTCGGCTTGTAAAATTGAATATGACTTGTATGTGTGTTTTGAAAGAAAACCACCTGTCAGCCAGTGATGCAGAATTTAACAAAGGAATTCCCATGCCTGACCTCAAATCTGGCAAACTTGGTGAATTTTCAGTTGATCATTTTAATTCTGCAGAGTTTCTTGCGCATCTCAAAAATCTTGCACTGGTTGTTTCCATGGGTGGCACACTTGATTTTGTTGTCAAACGAAATCAATTATCAGCCTTCTACCGTTCCATAGGGCACAGCCAACTGCCTATGCATCTACTCCGGGAAACAAATGATGCTGAAGATGGTGCTGATTGCAAGTCAATGGCTAAACGTAATGTCGACATTCGGGTTGGATATGGAGATACTGAGCTAGATGAAGTGTTCTTGAAAAGCACGCCATTGAATAACTCTCAGAAGAATGGAAGAAATGAATTGTTAGACAAGGTTTTTGATGGAGACCATATTGCTGATGAAGGTTTCATCTCAGGTTCAAAATTGAGGAGGAGAAAGGTGAAGAGGGATTCTGACTTTGAATATGGTGATGTTGGAAATGAGGGAATGACTGAAAAAGGCATTGAATCAAAAGAACGGAAGAAGAGCAGGTACTTGTCTTACCCGTACATAAACTTGGGACAGAAGGGATTGCCTGCTGAAATGGATGATGAGGGAGTGGCTGCAAATGTTGATGCCAGCCAGTCTAGTGGGTCGCCTTCTAATTTTAAATTTACTGGTGAGAAGTTCTGGAGAAAGTGGTATAAAAGGCTTACAGGTGAAAGTAACATATCCGGTGACCCAAACTTAATAAATGCATCTTCTGCTGAGTTGCTTTCTGAAATCTACTCTACAGCTGTCAACTGCCTATATCCGAACGACAATAAGACATTTGATTCAGTTGCCTGGTTTGTTTCTAGATTCAGGATTTCAGTATTTCATGATGAATCTATTTGTGAAGCCTATCGTAACAATATGGCTGGTCAGGAAGATGCTAACCCCAACCTGTTGGGATATAGCAGTCAGAACGAGGCAAAATCTGAACCAAAGAAAAGGAGGAGAAAGTCTAAGTTGAAGCATCCAGAGGGCGAAGACACTGCCAGCATACCAAATCTAGTTCAAAGCACTTCAACTGCTACAAAGAAAAGGGGACGACCACATCTGGGAAGATTGAAGACTAAATCCCTTTCTGGACTGTCAGATGTGAATATTGGCATCACCCCTGATAGCTTTTTGGTGCAAGAGTCGTTGGACGTACACCCTCTCATGCCCTGTGGTAAGCAAAAGAATAGAAAGATTGATGATGTAGCAAGTCCAGTGTGTCTGCAGAATAAACAAACTACAGGAATTCCAGATTTAAATGGGAACAATCTTCTACCTGGCCTTCTCGGTGATGATCAACAGACTATTGGCACTGCTGCTTCTGAAGATCTGCGGGTTTCTCCTCAAGCTTTGTCATGCCTGGACCCCAAACAGATTACTGGCTTACTCTCAGCTGAAACTAGGCCTGCACAGAGAAAGAGAAAGAGAAAGGAGAAAGCAGAACCAAAGCCTCCGGCTGATGGTATTCCAGATTTGAATGGAAGTAGTGCTGAATGCAACTTATTGGGAAAGGCATGTCAAGAGTTTAATGGCCTTACGCCTCCAATTAAACCAGAGCGGAAGAGGAGGAGGAGAAAAGGAGAAGCTACCGCTATGCAGCGGAAACTGGATGTGAATAATGGTAAAGCTCAGATTAATGATAAGGCTCTGGCAACTGCTCTTATGTTGAACTTTTCCCCAGGAGTAGCAATGCCTTCAAAAGATGATTTGATTTCAACATTTTGTCGGTTTGGACCTTTGAAGGAGTCGGAGACACAGATGTTGAAAGATCCTGGTAGTGCCCAGGTTGTATTCATGGAAAATGCTGATGCTGGAGAAGCACTTCGGAGTCTAGAGAAGGACAACCCTTTTGGAGGAAACCTCGTTAGTTACAAGCTCTTCCATCTTCCATCTGTGTCCAAGGTTTTAGAACCAGGATGGTCTCTCCCCACAGGTCTAGCCTCTCCAAGTTTGCCTGAAAAGGCACCTCGCCTCGACTTCATAAGGCAGAATCTTCAGATGATGACATCAATGCTGGAGAACTCAGGAGACAATCTTTCTCCGGAGATGCGAGCAAAGCTGGAGTGTGAAATTAAGGCCCTCCTGCAGAAGGGAGTGACTCCTTCGGGCAGGCTCTGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1181

Amino Acids

128.21

Weight (kDa)

4.88

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 949
Acc16I TGCGCA 1 cut(s) 1482
Acc36I ACCTGC 3 cut(s) 949, 974, 1917
AccB1I GGYRCC 3 cut(s) 1145, 1209, 3382
AccBSI CCGCTC 1 cut(s) 2977
AccI GTMKAC 2 cut(s) 1171, 1665
AccIII TCCGGA 1 cut(s) 3460
AciI CCGC 7 cut(s) 170, 203, 422, 2752, 2977, 3009, 3019
AclWI GGATC 3 cut(s) 1151, 1164, 3182
AcoI YGGCCR 1 cut(s) 937
AcsI RAATTY 7 cut(s) 123, 1004, 1391, 1404, 1442, 2048, 2664
AcuI CTGAAG 3 cut(s) 1644, 2763, 3398
AfaI GTAC 7 cut(s) 100, 772, 988, 1244, 1931, 1946, 2574
AfiI CCNNNNNNNGG 7 cut(s) 63, 64, 1098, 2480, 2879, 3272, 3508
AgeI ACCGGT 1 cut(s) 158
AhlI ACTAGT 1 cut(s) 1174
AjiI CACGTC 1 cut(s) 553
AloI GAACNNNNNNTCC 2 cut(s) 684, 716
Alw26I GTCTC 4 cut(s) 1776, 3164, 3345, 3441
AlwI GGATC 3 cut(s) 1151, 1164, 3182
AlwNI CAGNNNCTG 3 cut(s) 278, 995, 3534
Ama87I CYCGRG 1 cut(s) 746
Aor13HI TCCGGA 1 cut(s) 3460
AoxI GGCC 7 cut(s) 8, 937, 1103, 2698, 2822, 2950, 3495
ApeKI GCWGC 3 cut(s) 2000, 2735, 3016
ApoI RAATTY 7 cut(s) 123, 1004, 1391, 1404, 1442, 2048, 2664
ArsI GACNNNNNNTTYG 4 cut(s) 1757, 1789, 3251, 3283
AseI ATTAAT 1 cut(s) 3054
AsiGI ACCGGT 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 3240
AspLEI GCGC 1 cut(s) 1483
AspS9I GGNCC 3 cut(s) 2782, 3152, 3496
AsuC2I CCSGG 1 cut(s) 1607
AvaI CYCGRG 1 cut(s) 746
AvaII GGWCC 2 cut(s) 2782, 3152
BaeGI GKGCMC 2 cut(s) 1581, 3202
BalI TGGCCA 1 cut(s) 939
BamHI GGATCC 1 cut(s) 1156
BanI GGYRCC 3 cut(s) 1145, 1209, 3382
BanII GRGCYC 2 cut(s) 364, 374
BarI GAAGNNNNNNTAC 2 cut(s) 1913, 1945
BbsI GAAGAC 2 cut(s) 2415, 2498
BbvI GCAGC 3 cut(s) 1987, 2722, 3028
BcgI CGANNNNNNTGC 2 cut(s) 2396, 2430
BclI TGATCA 2 cut(s) 1453, 2713
BcnI CCSGG 1 cut(s) 1607
BcoDI GTCTC 4 cut(s) 1776, 3164, 3345, 3441
BcuI ACTAGT 1 cut(s) 1174
BfmI CTRYAG 8 cut(s) 956, 996, 1467, 2169, 2642, 2658, 3503, 3535
BfuAI ACCTGC 3 cut(s) 949, 974, 1917
BglII AGATCT 1 cut(s) 2746
BisI GCNGC 4 cut(s) 171, 2001, 2736, 3017
BlsI GCNGC 4 cut(s) 172, 2002, 2737, 3018
BmcAI AGTACT 1 cut(s) 1244
Bme18I GGWCC 2 cut(s) 2782, 3152
BmeT110I CYCGRG 1 cut(s) 746
BmgBI CACGTC 1 cut(s) 553
BmgT120I GGNCC 3 cut(s) 2782, 3152, 3496
BmrI ACTGGG 1 cut(s) 111
BmuI ACTGGG 1 cut(s) 111
BpiI GAAGAC 2 cut(s) 2415, 2498
BplI GAGNNNNNCTC 2 cut(s) 3264, 3296
BpmI CTGGAG 4 cut(s) 2089, 3252, 3455, 3500
BpuEI CTTGAG 2 cut(s) 183, 2748
BpuMI CCSGG 1 cut(s) 1607
BsaBI GATNNNNATC 1 cut(s) 679
BsaI GGTCTC 2 cut(s) 1776, 3345
BsaJI CCNNGG 7 cut(s) 722, 1160, 1285, 1512, 3097, 3201, 3318
BsaWI WCCGGW 3 cut(s) 158, 2111, 3460
Bsc4I CCNNNNNNNGG 7 cut(s) 63, 64, 1098, 2480, 2879, 3272, 3508
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 9 cut(s) 106, 1149, 1380, 1506, 2020, 2059, 2633, 2803, 3030
Bse3DI GCAATG 1 cut(s) 3114
Bse8I GATNNNNATC 1 cut(s) 679
BseAI TCCGGA 1 cut(s) 3460
BseDI CCNNGG 7 cut(s) 722, 1160, 1285, 1512, 3097, 3201, 3318
BseJI GATNNNNATC 1 cut(s) 679
BseLI CCNNNNNNNGG 7 cut(s) 63, 64, 1098, 2480, 2879, 3272, 3508
BseMI GCAATG 1 cut(s) 3114
BseMII CTCAG 9 cut(s) 63, 876, 1683, 1751, 1824, 2136, 2823, 3062, 3456
BseNI ACTGG 9 cut(s) 106, 1149, 1380, 1506, 2020, 2059, 2633, 2803, 3030
BseRI GAGGAG 8 cut(s) 332, 1840, 1843, 2389, 2751, 2998, 3001, 3004
BseSI GKGCMC 2 cut(s) 1581, 3202
BseXI GCAGC 3 cut(s) 1987, 2722, 3028
BsgI GTGCAG 2 cut(s) 575, 2811
BshFI GGCC 7 cut(s) 10, 939, 1105, 2700, 2824, 2952, 3497
BshNI GGYRCC 3 cut(s) 1145, 1209, 3382
BshTI ACCGGT 1 cut(s) 158
BsiHKCI CYCGRG 1 cut(s) 746
BsiSI CCGG 5 cut(s) 159, 1606, 2112, 2873, 3461
BslFI GGGAC 2 cut(s) 1971, 2481
BslI CCNNNNNNNGG 7 cut(s) 63, 64, 1098, 2480, 2879, 3272, 3508
BsmAI GTCTC 4 cut(s) 1776, 3164, 3345, 3441
BsmFI GGGAC 2 cut(s) 1971, 2481
BsmI GAATGC 1 cut(s) 2918
BsnI GGCC 7 cut(s) 10, 939, 1105, 2700, 2824, 2952, 3497
Bso31I GGTCTC 2 cut(s) 1776, 3345
BsoBI CYCGRG 1 cut(s) 746
Bsp1286I GDGCHC 4 cut(s) 364, 374, 1581, 3202
Bsp13I TCCGGA 1 cut(s) 3460
Bsp143I GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
Bsp19I CCATGG 1 cut(s) 1512
BspACI CCGC 7 cut(s) 170, 203, 422, 2752, 2977, 3009, 3019
BspANI GGCC 7 cut(s) 10, 939, 1105, 2700, 2824, 2952, 3497
BspCNI CTCAG 9 cut(s) 64, 875, 1684, 1750, 1823, 2137, 2822, 3061, 3455
BspEI TCCGGA 1 cut(s) 3460
BspHI TCATGA 1 cut(s) 2257
BspMAI CTGCAG 4 cut(s) 960, 1471, 2646, 3507
BspMI ACCTGC 3 cut(s) 949, 974, 1917
BspPI GGATC 3 cut(s) 1151, 1164, 3182
BspQI GCTCTTC 2 cut(s) 1916, 3302
BspT107I GGYRCC 3 cut(s) 1145, 1209, 3382
BspTNI GGTCTC 2 cut(s) 1776, 3345
BsrBI CCGCTC 1 cut(s) 2977
BsrDI GCAATG 1 cut(s) 3114
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 9 cut(s) 106, 1149, 1380, 1506, 2020, 2059, 2633, 2803, 3030
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 7 cut(s) 722, 1160, 1285, 1512, 3097, 3201, 3318
BssMI GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
BssT1I CCWWGG 3 cut(s) 1285, 1512, 3318
Bst4CI ACNGT 8 cut(s) 98, 432, 579, 726, 921, 997, 1568, 2514
Bst6I CTCTTC 8 cut(s) 474, 621, 777, 1305, 1835, 1916, 2975, 3302
BstAPI GCANNNNNTGC 1 cut(s) 2141
BstC8I GCNNGC 7 cut(s) 1721, 1974, 2017, 2419, 2826, 3471, 3530
BstDSI CCRYGG 2 cut(s) 722, 1512
BstEII GGTNACC 1 cut(s) 2114
BstENI CCTNNNNNAGG 2 cut(s) 3270, 3506
BstHHI GCGC 1 cut(s) 1483
BstKTI GATC 8 cut(s) 37, 955, 1123, 1159, 1456, 2716, 2749, 3190
BstMAI GTCTC 4 cut(s) 1776, 3164, 3345, 3441
BstMBI GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
BstMWI GCNNNNNNNGC 5 cut(s) 209, 1385, 2141, 3236, 3475
BstNSI RCATGY 1 cut(s) 2937
BstPI GGTNACC 1 cut(s) 2114
BstSFI CTRYAG 8 cut(s) 956, 996, 1467, 2169, 2642, 2658, 3503, 3535
BstSLI GKGCMC 2 cut(s) 1581, 3202
BstV1I GCAGC 3 cut(s) 1987, 2722, 3028
BstV2I GAAGAC 2 cut(s) 2415, 2498
BstX2I RGATCY 3 cut(s) 1156, 2746, 3187
BstXI CCANNNNNNTGG 2 cut(s) 2027, 2326
BstYI RGATCY 3 cut(s) 1156, 2746, 3187
BsuRI GGCC 7 cut(s) 10, 939, 1105, 2700, 2824, 2952, 3497
BtgI CCRYGG 2 cut(s) 722, 1512
BtgZI GCGATG 2 cut(s) 519, 666
BtrI CACGTC 1 cut(s) 553
BtsI GCAGTG 2 cut(s) 2412, 2730
BtsIMutI CAGTG 7 cut(s) 917, 1156, 1387, 1499, 2412, 2640, 2730
BveI ACCTGC 3 cut(s) 949, 974, 1917
Cac8I GCNNGC 7 cut(s) 1721, 1974, 2017, 2419, 2826, 3471, 3530
CaiI CAGNNNCTG 3 cut(s) 278, 995, 3534
CciI TCATGA 1 cut(s) 2257
CfoI GCGC 1 cut(s) 1483
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 3 cut(s) 2782, 3152, 3496
CseI GACGC 1 cut(s) 1122
Csp6I GTAC 7 cut(s) 99, 771, 987, 1243, 1930, 1945, 2573
CspAI ACCGGT 1 cut(s) 158
CviQI GTAC 7 cut(s) 99, 771, 987, 1243, 1930, 1945, 2573
DpnI GATC 8 cut(s) 36, 954, 1122, 1158, 1455, 2715, 2748, 3189
DpnII GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
DraI TTTAAA 2 cut(s) 2047, 2676
EaeI YGGCCR 1 cut(s) 937
Eam1104I CTCTTC 8 cut(s) 474, 621, 777, 1305, 1835, 1916, 2975, 3302
EarI CTCTTC 8 cut(s) 474, 621, 777, 1305, 1835, 1916, 2975, 3302
Eco130I CCWWGG 3 cut(s) 1285, 1512, 3318
Eco147I AGGCCT 1 cut(s) 2824
Eco24I GRGCYC 2 cut(s) 364, 374
Eco31I GGTCTC 2 cut(s) 1776, 3345
Eco47I GGWCC 2 cut(s) 2782, 3152
Eco57I CTGAAG 3 cut(s) 1644, 2763, 3398
Eco88I CYCGRG 1 cut(s) 746
Eco91I GGTNACC 1 cut(s) 2114
EcoNI CCTNNNNNAGG 2 cut(s) 3270, 3506
EcoO109I RGGNCCY 1 cut(s) 3496
EcoO65I GGTNACC 1 cut(s) 2114
EcoRI GAATTC 2 cut(s) 1404, 2664
EcoT14I CCWWGG 3 cut(s) 1285, 1512, 3318
EcoT22I ATGCAT 2 cut(s) 1599, 2137
EcoT38I GRGCYC 2 cut(s) 364, 374
ErhI CCWWGG 3 cut(s) 1285, 1512, 3318
FaqI GGGAC 2 cut(s) 1971, 2481
FauI CCCGC 1 cut(s) 2745
FbaI TGATCA 2 cut(s) 1453, 2713
FblI GTMKAC 2 cut(s) 1171, 1665
Fnu4HI GCNGC 4 cut(s) 171, 2001, 2736, 3017
FriOI GRGCYC 2 cut(s) 364, 374
Fsp4HI GCNGC 4 cut(s) 171, 2001, 2736, 3017
FspI TGCGCA 1 cut(s) 1482
GlaI GCGC 1 cut(s) 1482
GluI GCNGC 4 cut(s) 171, 2001, 2736, 3017
GsuI CTGGAG 4 cut(s) 2089, 3252, 3455, 3500
HaeIII GGCC 7 cut(s) 10, 939, 1105, 2700, 2824, 2952, 3497
HapII CCGG 5 cut(s) 159, 1606, 2112, 2873, 3461
HgaI GACGC 1 cut(s) 1122
HhaI GCGC 1 cut(s) 1483
Hin6I GCGC 1 cut(s) 1481
HinP1I GCGC 1 cut(s) 1481
HincII GTYRAC 3 cut(s) 874, 1666, 2179
HindII GTYRAC 3 cut(s) 874, 1666, 2179
HindIII AAGCTT 1 cut(s) 2766
HpaII CCGG 5 cut(s) 159, 1606, 2112, 2873, 3461
Hpy166II GTNNAC 5 cut(s) 874, 1172, 1666, 2179, 2575
Hpy8I GTNNAC 5 cut(s) 874, 1172, 1666, 2179, 2575
HpyCH4III ACNGT 8 cut(s) 98, 432, 579, 726, 921, 997, 1568, 2514
HpyCH4IV ACGT 4 cut(s) 552, 699, 1657, 2571
HpyF10VI GCNNNNNNNGC 5 cut(s) 209, 1385, 2141, 3236, 3475
HpySE526I ACGT 4 cut(s) 552, 699, 1657, 2571
HspAI GCGC 1 cut(s) 1481
Kpn2I TCCGGA 1 cut(s) 3460
Ksp22I TGATCA 2 cut(s) 1453, 2713
Kzo9I GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
LguI GCTCTTC 2 cut(s) 1916, 3302
LmnI GCTCC 5 cut(s) 377, 424, 571, 718, 1289
Lsp1109I GCAGC 3 cut(s) 1987, 2722, 3028
MaeII ACGT 4 cut(s) 552, 699, 1657, 2571
MaeIII GTNAC 8 cut(s) 154, 193, 1064, 2102, 2114, 2285, 3287, 3514
MalI GATC 8 cut(s) 36, 954, 1122, 1158, 1455, 2715, 2748, 3189
MbiI CCGCTC 1 cut(s) 2977
MboI GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
MflI RGATCY 3 cut(s) 1156, 2746, 3187
MhlI GDGCHC 4 cut(s) 364, 374, 1581, 3202
MlsI TGGCCA 1 cut(s) 939
MluNI TGGCCA 1 cut(s) 939
MlyI GAGTC 9 cut(s) 119, 190, 854, 869, 1204, 2570, 3173, 3256, 3511
MmeI TCCRAC 6 cut(s) 87, 1159, 1657, 1852, 2547, 3147
Mox20I TGGCCA 1 cut(s) 939
Mph1103I ATGCAT 2 cut(s) 1599, 2137
MroI TCCGGA 1 cut(s) 3460
MroXI GAANNNNTTC 1 cut(s) 3240
MscI TGGCCA 1 cut(s) 939
Msp20I TGGCCA 1 cut(s) 939
MspA1I CMGCKG 3 cut(s) 2174, 2813, 3019
MspI CCGG 5 cut(s) 159, 1606, 2112, 2873, 3461
Mva1269I GAATGC 1 cut(s) 2918
MwoI GCNNNNNNNGC 5 cut(s) 209, 1385, 2141, 3236, 3475
NciI CCSGG 1 cut(s) 1607
NcoI CCATGG 1 cut(s) 1512
NdeII GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
NmuCI GTSAC 4 cut(s) 193, 1064, 2114, 3514
NsbI TGCGCA 1 cut(s) 1482
NsiI ATGCAT 2 cut(s) 1599, 2137
NspI RCATGY 1 cut(s) 2937
PagI TCATGA 1 cut(s) 2257
PaqCI CACCTGC 1 cut(s) 949
PceI AGGCCT 1 cut(s) 2824
PciSI GCTCTTC 2 cut(s) 1916, 3302
PctI GAATGC 1 cut(s) 2918
PdmI GAANNNNTTC 1 cut(s) 3240
PfeI GAWTC 8 cut(s) 222, 742, 1847, 1904, 2213, 2238, 2264, 3409
PfoI TCCNGGA 4 cut(s) 118, 225, 973, 1605
PinAI ACCGGT 1 cut(s) 158
PkrI GCNGC 4 cut(s) 172, 2002, 2737, 3018
PleI GAGTC 9 cut(s) 118, 190, 854, 869, 1203, 2569, 3172, 3255, 3511
PpsI GAGTC 9 cut(s) 118, 190, 854, 869, 1203, 2569, 3172, 3255, 3511
PshBI ATTAAT 1 cut(s) 3054
PspEI GGTNACC 1 cut(s) 2114
PspPI GGNCC 3 cut(s) 2782, 3152, 3496
PstI CTGCAG 4 cut(s) 960, 1471, 2646, 3507
PstNI CAGNNNCTG 3 cut(s) 278, 995, 3534
PsuI RGATCY 3 cut(s) 1156, 2746, 3187
PvuII CAGCTG 2 cut(s) 2174, 2813
RsaI GTAC 7 cut(s) 100, 772, 988, 1244, 1931, 1946, 2574
RsaNI GTAC 7 cut(s) 99, 771, 987, 1243, 1930, 1945, 2573
SalI GTCGAC 1 cut(s) 1664
SapI GCTCTTC 2 cut(s) 1916, 3302
SatI GCNGC 4 cut(s) 171, 2001, 2736, 3017
Sau3AI GATC 8 cut(s) 34, 952, 1120, 1156, 1453, 2713, 2746, 3187
Sau96I GGNCC 3 cut(s) 2782, 3152, 3496
ScaI AGTACT 1 cut(s) 1244
SchI GAGTC 9 cut(s) 119, 190, 854, 869, 1204, 2570, 3173, 3256, 3511
SduI GDGCHC 4 cut(s) 364, 374, 1581, 3202
SfcI CTRYAG 8 cut(s) 956, 996, 1467, 2169, 2642, 2658, 3503, 3535
SinI GGWCC 2 cut(s) 2782, 3152
SmiI ATTTAAAT 1 cut(s) 2676
SmlI CTYRAG 2 cut(s) 198, 2763
SmoI CTYRAG 2 cut(s) 198, 2763
SpeI ACTAGT 1 cut(s) 1174
SseBI AGGCCT 1 cut(s) 2824
SsiI CCGC 7 cut(s) 170, 203, 422, 2752, 2977, 3009, 3019
SspI AATATT 2 cut(s) 1281, 2527
StuI AGGCCT 1 cut(s) 2824
StyI CCWWGG 3 cut(s) 1285, 1512, 3318
SwaI ATTTAAAT 1 cut(s) 2676
TaaI ACNGT 8 cut(s) 98, 432, 579, 726, 921, 997, 1568, 2514
TaiI ACGT 4 cut(s) 555, 702, 1660, 2574
TaqI TCGA 4 cut(s) 1123, 1308, 1665, 3393
TatI WGTACW 2 cut(s) 98, 1242
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 8 cut(s) 222, 742, 1847, 1904, 2213, 2238, 2264, 3409
TscAI CASTG 7 cut(s) 924, 1156, 1387, 1506, 2419, 2640, 2737
TseFI GTSAC 4 cut(s) 193, 1064, 2114, 3514
TseI GCWGC 3 cut(s) 2000, 2735, 3016
Tsp45I GTSAC 4 cut(s) 193, 1064, 2114, 3514
TspGWI ACGGA 2 cut(s) 575, 1930
TspRI CASTG 7 cut(s) 924, 1156, 1387, 1506, 2419, 2640, 2737
VpaK11BI GGWCC 2 cut(s) 2782, 3152
VspI ATTAAT 1 cut(s) 3054
XagI CCTNNNNNAGG 2 cut(s) 3270, 3506
XapI RAATTY 7 cut(s) 123, 1004, 1391, 1404, 1442, 2048, 2664
XbaI TCTAGA 2 cut(s) 2234, 3250
XceI RCATGY 1 cut(s) 2937
XmiI GTMKAC 2 cut(s) 1171, 1665
XmnI GAANNNNTTC 1 cut(s) 3240
ZrmI AGTACT 1 cut(s) 1244
Zsp2I ATGCAT 2 cut(s) 1599, 2137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.