Rorug07G0217400

Serine threonine-protein kinase ATM-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
19425352 .. 19429972
4621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0217400.1

Sequence Viewer

Length: 2490 bp
ATGGTTAACGAGTGCAGTGAGGATATGGAATTGGAAGAGAAGAGCAAGAAAGAGTGTGGTTTGGACCAGAACTCATTTGAGCAATGTGAGAAAGAGATGGAGTTGAAGAGAGGGGAGCTTGATTCGAATCGGAAATCGATGGCGGAATGTTCTGATACAGTTGAATTGAGAGAGGGAAAGATGAGGGAAATGTGTGGAGGTTTTAGTTTGCTTAAGAAGTCGATGGAGGAGTGGTGCTGTAAGGTTGAATTTAAAGAGAGGGGGATTGAGGAGTGTGTTGCCAAGCTTGAATTGAAGGAGAAACAAGTTGAATCGAGATTTGAGGAGCTTAATGTGATTGATAAGAGGGTTAATGAGTGCCTTGGTGATGCTCAGTTGAAAGAAAAGCAGTTGGATTCTGTTATGAAATTAATACAAGAAGACAAACAGCATTTGGATTGGCTCCAAAAGTCGGTGGAAGAGCATGAAAAACAGTTGGGTTTGGTATCAAATGGACTTCAAGGAAAGGCGAGGGAGCTTGAAGTGCAACAACAACAAATTGATTCAGTCTACCATGTGTTACAGATTAAAGAGAATGAACTTGAACAGCAGGCCCAAGAGCTTGATTTGAAACGCCAACAATATGAGTCACTTTTCCATCTATTTCAGATCAAAGAGGGGCAGCTTGAAAAGCAATCCAGAGATCTTGAATTGAAACACAAACAAATTGAATCCATCCGCCATCTGTTTCAGATGAAAGAGTCGCAACTTGAAAATCGAGCCAAGGAGCTTGGATTCAAACAGCAACAAAATGATTCAATCTCTCAACTACTTAAGATGAAAGAAAGGGAACTTGAACAGCGGGAAAAAGAGCTTGAACCCAAACAACAGCAAATTGTTTCGGTTTCGCAGACACTTCAGATGAAAGAGAGGAAACTTGAACAACAGGCAAAAGAGCTTGACTTGAAGCAAAAACAATTTGATTCTCAGGTGAAGATGGTCCAGTTGATACATGCACCTGCTGCTAACAATGCCACTATTCCTTCATCTGCAACTGATGAATCCAGGTCCAGCATCAATATGGATGGTCGAGGCTTGCAGTTTTTTATGTATGAACAATTGAAGAAAATTGATTCAATGCGTGCCCAAATGTCGGCTGCTTTTCAAGTGTCATCAGACCCAGGAAATTTGGTTTTGGACGCAATGCAAGGATTTTACCCTTCAAATTCAAATATGGGAAAGAGGGAGACTGATTTTGATCTGAGCTTTATTAGAAGAAGTTGTATTCTTCTATTACAGGAGTTAAAGAGGATGTCACCACAACTTAATCCTGGGGTAAGAGAAAAAGCATTGAAGTTGGCAGCTCATTGGAAGGCCAAGTTGACAGTGGCCACTGATAATTCATTGGAGGTTTTGGGATTTTTGCGGCTTGTAACTGCGTTTGAATTAACCTCTGCTTATGATGCCAATGAGCTTCAGAGTCTTCTTTCTGGTGTTACTCAGCCCAAACAAGCAGCTCAATTAAGACAGGCTCTTGGTGTCAAAGATAAGGAACCTTCAACCAACAGCATTTCTCCCCTAGTCAAAGTGGTGGAACCAGCATCTACCAATGCAGCAGCCTTTCCTTCTTCAAATATTCAATCAAATGTCACTAAGGATGCAGGGAATGTGTCGGGGTTTGGAAATATGCCTTTAAGTGGGAATCATTCTATACTGGCTGCTTCTGTTCCATTGTCATCAGACCCAGCTAAACTCGTGTTGGATAGCATCCAGAAGTCTCTTGCTGAATACTTGCGAAATGGAGATTGTGAAGAAAGTATCATGTCAAGTAACATTAGCCTATTGGAGGAGCTAATGAGAGTCTCACCAAATGTTGGACCTAATCTGAAAGCAGAAGCAACAAATCTATCAGTCCAGTGGAAAGCAAAGATGACAGGAAATACTGAGAAGTCATTGGAGGGTGTAGGATTTTTGCTATTTTTATCTACATATGGATTACTTTCTACGTTAAATACTGATGAGATTGTAAAGCATCTTGGGTTGATTTGTCACCATAAACAGGCTCTAGAATTATGCCAGGCACGTGGTTTTGCAGATAAGATTGGTGAATTTATTCGGATCCTTGTTGAAAAGAAGCAACTTATTGAGGCTGTTAGATTTATTTTCGCGTTCAAGTTAACTGACAAGCTTTCCCCAGTCCAACTTTTAAAAGAATATTTGGAGGATACAAAAAAGTGTTCTGAAGCAATTTTCATGTTGCAGATATCACAAGATGAAAAGGAGAAGGTGGCAGATGGTCTGTTAGGTGATCTAAGAGCTGTGCATCAATACATTAAGGATTACAATCTTGAGTCCAAATACCCATCTGCAGACATTGAAATGCAAATAGTTAAGCTGGAAACAGTAAAGTCTTCCCCTGCCTCCAATGTCGAACAGCAAGAGCAGAGAAAAAGGAAGAAACCTAGTGCTGGCACTTCGACCCTTGAGATCCAACCACCACAACAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

829

Amino Acids

93.96

Weight (kDa)

5.65

Isoelectric Point (pI)

52.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 353 - 510 1.6e-37 Frigida-like protein
Frigida PF07899 571 - 801 9.9e-51 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1006
Acc36I ACCTGC 1 cut(s) 1006
AccB7I CCANNNNNTGG 1 cut(s) 1853
AccI GTMKAC 1 cut(s) 549
AccII CGCG 1 cut(s) 2147
AciI CCGC 4 cut(s) 143, 718, 841, 1405
AclWI GGATC 3 cut(s) 2092, 2105, 2461
AcoI YGGCCR 1 cut(s) 1368
AcsI RAATTY 4 cut(s) 248, 1165, 1204, 2087
AcuI CTGAAG 3 cut(s) 881, 1439, 2241
AcvI CACGTG 1 cut(s) 2063
AfiI CCNNNNNNNGG 7 cut(s) 451, 1132, 1676, 1825, 1853, 2038, 2447
AflII CTTAAG 2 cut(s) 212, 812
AjnI CCWGG 4 cut(s) 1043, 1159, 1309, 2055
Alw26I GTCTC 3 cut(s) 1220, 1761, 1846
AlwI GGATC 3 cut(s) 2092, 2105, 2461
AoxI GGCC 4 cut(s) 591, 1353, 1368, 2484
ApeKI GCWGC 8 cut(s) 661, 1001, 1136, 1340, 1493, 1592, 1595, 1697
ApoI RAATTY 4 cut(s) 248, 1165, 1204, 2087
AseI ATTAAT 1 cut(s) 410
Asp700I GAANNNNTTC 1 cut(s) 2091
AspS9I GGNCC 5 cut(s) 64, 592, 979, 1047, 1856
AsuHPI GGTGA 7 cut(s) 377, 982, 1287, 1836, 2021, 2096, 2297
AsuII TTCGAA 1 cut(s) 125
AvaII GGWCC 4 cut(s) 64, 979, 1047, 1856
BaeGI GKGCMC 1 cut(s) 1126
BalI TGGCCA 1 cut(s) 1370
BamHI GGATCC 1 cut(s) 2097
BauI CACGAG 1 cut(s) 1733
BbrPI CACGTG 1 cut(s) 2063
BbsI GAAGAC 3 cut(s) 426, 1454, 2382
BbvI GCAGC 8 cut(s) 673, 988, 1123, 1352, 1505, 1604, 1607, 1684
BciT130I CCWGG 4 cut(s) 1045, 1161, 1311, 2057
BciVI GTATCC 1 cut(s) 2197
BcoDI GTCTC 3 cut(s) 1220, 1761, 1846
BfaI CTAG 3 cut(s) 1559, 2045, 2442
BfmI CTRYAG 1 cut(s) 2346
BfrI CTTAAG 2 cut(s) 212, 812
BfuAI ACCTGC 1 cut(s) 1006
BfuI GTATCC 1 cut(s) 2197
BglII AGATCT 1 cut(s) 682
BisI GCNGC 9 cut(s) 662, 1002, 1137, 1341, 1406, 1494, 1593, 1596, 1698
BlsI GCNGC 9 cut(s) 663, 1003, 1138, 1342, 1407, 1495, 1594, 1597, 1699
Bme1390I CCNGG 4 cut(s) 1045, 1161, 1311, 2057
Bme18I GGWCC 4 cut(s) 64, 979, 1047, 1856
BmgT120I GGNCC 5 cut(s) 64, 592, 979, 1047, 1856
BmiI GGNNCC 4 cut(s) 443, 1533, 1575, 2099
BmrFI CCNGG 4 cut(s) 1045, 1161, 1311, 2057
BmrI ACTGGG 1 cut(s) 2168
BmsI GCATC 8 cut(s) 358, 1062, 1432, 1589, 1627, 1755, 2020, 2311
BmuI ACTGGG 1 cut(s) 2168
BpiI GAAGAC 3 cut(s) 426, 1454, 2382
Bpu14I TTCGAA 1 cut(s) 125
BpuEI CTTGAG 2 cut(s) 2348, 2483
Bsa29I ATCGAT 1 cut(s) 137
BsaAI YACGTR 1 cut(s) 2063
BsaBI GATNNNNATC 3 cut(s) 126, 1236, 2322
BsaJI CCNNGG 4 cut(s) 361, 762, 1159, 1310
BsaXI ACNNNNNCTCC 2 cut(s) 218, 248
Bsc4I CCNNNNNNNGG 7 cut(s) 451, 1132, 1676, 1825, 1853, 2038, 2447
Bse1I ACTGG 4 cut(s) 982, 1698, 1894, 2174
Bse3DI GCAATG 2 cut(s) 89, 1188
Bse8I GATNNNNATC 3 cut(s) 126, 1236, 2322
BseBI CCWGG 4 cut(s) 1045, 1161, 1311, 2057
BseCI ATCGAT 1 cut(s) 137
BseDI CCNNGG 4 cut(s) 361, 762, 1159, 1310
BseGI GGATG 5 cut(s) 714, 1069, 1296, 1642, 1746
BseJI GATNNNNATC 3 cut(s) 126, 1236, 2322
BseLI CCNNNNNNNGG 7 cut(s) 451, 1132, 1676, 1825, 1853, 2038, 2447
BseMI GCAATG 2 cut(s) 89, 1188
BseMII CTCAG 5 cut(s) 386, 980, 1232, 1493, 1914
BseNI ACTGG 4 cut(s) 982, 1698, 1894, 2174
BseRI GAGGAG 4 cut(s) 242, 284, 338, 1841
BseSI GKGCMC 1 cut(s) 1126
BseXI GCAGC 8 cut(s) 673, 988, 1123, 1352, 1505, 1604, 1607, 1684
BseYI CCCAGC 1 cut(s) 1723
BsgI GTGCAG 1 cut(s) 34
Bsh1236I CGCG 1 cut(s) 2147
BshFI GGCC 4 cut(s) 593, 1355, 1370, 2486
BshVI ATCGAT 1 cut(s) 137
BslI CCNNNNNNNGG 7 cut(s) 451, 1132, 1676, 1825, 1853, 2038, 2447
BsmAI GTCTC 3 cut(s) 1220, 1761, 1846
BsnI GGCC 4 cut(s) 593, 1355, 1370, 2486
Bsp119I TTCGAA 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 1126
Bsp143I GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
BspACI CCGC 4 cut(s) 143, 718, 841, 1405
BspANI GGCC 4 cut(s) 593, 1355, 1370, 2486
BspCNI CTCAG 5 cut(s) 385, 979, 1233, 1492, 1915
BspDI ATCGAT 1 cut(s) 137
BspFNI CGCG 1 cut(s) 2147
BspLI GGNNCC 4 cut(s) 443, 1533, 1575, 2099
BspMAI CTGCAG 1 cut(s) 2350
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 3 cut(s) 2092, 2105, 2461
BspQI GCTCTTC 2 cut(s) 35, 453
BspT104I TTCGAA 1 cut(s) 125
BspTI CTTAAG 2 cut(s) 212, 812
BsrDI GCAATG 2 cut(s) 89, 1188
BsrI ACTGG 4 cut(s) 982, 1698, 1894, 2174
BssECI CCNNGG 4 cut(s) 361, 762, 1159, 1310
BssMI GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
BssSI CACGAG 1 cut(s) 1733
BssT1I CCWWGG 2 cut(s) 361, 762
Bst2BI CACGAG 1 cut(s) 1733
Bst2UI CCWGG 4 cut(s) 1045, 1161, 1311, 2057
Bst4CI ACNGT 4 cut(s) 160, 474, 1366, 2383
Bst6I CTCTTC 4 cut(s) 30, 35, 101, 453
BstAFI CTTAAG 2 cut(s) 212, 812
BstAPI GCANNNNNTGC 1 cut(s) 1001
BstBAI YACGTR 1 cut(s) 2063
BstBI TTCGAA 1 cut(s) 125
BstC8I GCNNGC 4 cut(s) 591, 1076, 1122, 2449
BstDEI CTNAG 7 cut(s) 372, 966, 1241, 1479, 1632, 1923, 2291
BstENI CCTNNNNNAGG 1 cut(s) 1823
BstF5I GGATG 5 cut(s) 714, 1069, 1296, 1642, 1746
BstFNI CGCG 1 cut(s) 2147
BstKTI GATC 6 cut(s) 651, 685, 1240, 2100, 2290, 2469
BstMAI GTCTC 3 cut(s) 1220, 1761, 1846
BstMBI GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
BstMWI GCNNNNNNNGC 5 cut(s) 523, 670, 1001, 1010, 1442
BstNI CCWGG 4 cut(s) 1045, 1161, 1311, 2057
BstNSI RCATGY 1 cut(s) 995
BstSCI CCNGG 4 cut(s) 1043, 1159, 1309, 2055
BstSFI CTRYAG 1 cut(s) 2346
BstSLI GKGCMC 1 cut(s) 1126
BstUI CGCG 1 cut(s) 2147
BstV1I GCAGC 8 cut(s) 673, 988, 1123, 1352, 1505, 1604, 1607, 1684
BstV2I GAAGAC 3 cut(s) 426, 1454, 2382
BstX2I RGATCY 3 cut(s) 682, 2097, 2466
BstXI CCANNNNNNTGG 1 cut(s) 2063
BstYI RGATCY 3 cut(s) 682, 2097, 2466
Bsu15I ATCGAT 1 cut(s) 137
BsuI GTATCC 1 cut(s) 2197
BsuRI GGCC 4 cut(s) 593, 1355, 1370, 2486
BsuTUI ATCGAT 1 cut(s) 137
BtsCI GGATG 5 cut(s) 714, 1069, 1296, 1642, 1746
BtsI GCAGTG 1 cut(s) 22
BtsIMutI CAGTG 4 cut(s) 22, 1371, 1371, 1901
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 4 cut(s) 591, 1076, 1122, 2449
Cfr13I GGNCC 5 cut(s) 64, 592, 979, 1047, 1856
ClaI ATCGAT 1 cut(s) 137
CseI GACGC 1 cut(s) 1187
CviAII CATG 5 cut(s) 464, 554, 992, 1801, 2233
DdeI CTNAG 7 cut(s) 372, 966, 1241, 1479, 1632, 1923, 2291
DpnI GATC 6 cut(s) 650, 684, 1239, 2099, 2289, 2468
DpnII GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
DraI TTTAAA 2 cut(s) 253, 2187
EaeI YGGCCR 1 cut(s) 1368
Eam1104I CTCTTC 4 cut(s) 30, 35, 101, 453
EarI CTCTTC 4 cut(s) 30, 35, 101, 453
EciI GGCGGA 2 cut(s) 158, 707
Eco130I CCWWGG 2 cut(s) 361, 762
Eco147I AGGCCT 1 cut(s) 2486
Eco32I GATATC 1 cut(s) 2244
Eco47I GGWCC 4 cut(s) 64, 979, 1047, 1856
Eco57I CTGAAG 3 cut(s) 881, 1439, 2241
Eco72I CACGTG 1 cut(s) 2063
EcoNI CCTNNNNNAGG 1 cut(s) 1823
EcoRII CCWGG 4 cut(s) 1043, 1159, 1309, 2055
EcoRV GATATC 1 cut(s) 2244
EcoT14I CCWWGG 2 cut(s) 361, 762
ErhI CCWWGG 2 cut(s) 361, 762
FaeI CATG 5 cut(s) 467, 557, 995, 1804, 2236
FatI CATG 5 cut(s) 463, 553, 991, 1800, 2232
FauI CCCGC 1 cut(s) 834
FauNDI CATATG 1 cut(s) 1969
FblI GTMKAC 1 cut(s) 549
Fnu4HI GCNGC 9 cut(s) 662, 1002, 1137, 1341, 1406, 1494, 1593, 1596, 1698
FokI GGATG 5 cut(s) 701, 1076, 1303, 1649, 1733
Fsp4HI GCNGC 9 cut(s) 662, 1002, 1137, 1341, 1406, 1494, 1593, 1596, 1698
FspBI CTAG 3 cut(s) 1559, 2045, 2442
GluI GCNGC 9 cut(s) 662, 1002, 1137, 1341, 1406, 1494, 1593, 1596, 1698
GsaI CCCAGC 1 cut(s) 1727
HaeIII GGCC 4 cut(s) 593, 1355, 1370, 2486
HgaI GACGC 1 cut(s) 1187
Hin1II CATG 5 cut(s) 467, 557, 995, 1804, 2236
HincII GTYRAC 3 cut(s) 7, 1362, 2157
HindII GTYRAC 3 cut(s) 7, 1362, 2157
HindIII AAGCTT 2 cut(s) 284, 2165
HpaI GTTAAC 2 cut(s) 7, 2157
HphI GGTGA 7 cut(s) 377, 982, 1287, 1836, 2021, 2096, 2297
Hpy166II GTNNAC 4 cut(s) 7, 550, 1362, 2157
Hpy188III TCNNGA 6 cut(s) 315, 678, 686, 1750, 2045, 2327
Hpy8I GTNNAC 4 cut(s) 7, 550, 1362, 2157
HpyAV CCTTC 7 cut(s) 289, 1032, 1209, 1345, 1545, 1614, 2257
HpyCH4III ACNGT 4 cut(s) 160, 474, 1366, 2383
HpyCH4IV ACGT 2 cut(s) 1985, 2062
HpyF10VI GCNNNNNNNGC 5 cut(s) 523, 670, 1001, 1010, 1442
HpyF3I CTNAG 7 cut(s) 372, 966, 1241, 1479, 1632, 1923, 2291
HpySE526I ACGT 2 cut(s) 1985, 2062
Hsp92II CATG 5 cut(s) 467, 557, 995, 1804, 2236
KspAI GTTAAC 2 cut(s) 7, 2157
Kzo9I GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
LguI GCTCTTC 2 cut(s) 35, 453
LmnI GCTCC 6 cut(s) 115, 325, 447, 514, 766, 1828
Lsp1109I GCAGC 8 cut(s) 673, 988, 1123, 1352, 1505, 1604, 1607, 1684
LweI GCATC 8 cut(s) 358, 1062, 1432, 1589, 1627, 1755, 2020, 2311
MaeI CTAG 3 cut(s) 1559, 2045, 2442
MaeII ACGT 2 cut(s) 1985, 2062
MaeIII GTNAC 8 cut(s) 558, 627, 1293, 1411, 1474, 1627, 1808, 2027
MalI GATC 6 cut(s) 650, 684, 1239, 2099, 2289, 2468
MboI GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
MfeI CAATTG 1 cut(s) 1097
MflI RGATCY 3 cut(s) 682, 2097, 2466
MhlI GDGCHC 1 cut(s) 1126
MlsI TGGCCA 1 cut(s) 1370
MluNI TGGCCA 1 cut(s) 1370
MlyI GAGTC 5 cut(s) 635, 749, 1468, 1848, 2339
MmeI TCCRAC 4 cut(s) 372, 1719, 1834, 2203
Mox20I TGGCCA 1 cut(s) 1370
MroXI GAANNNNTTC 1 cut(s) 2091
MscI TGGCCA 1 cut(s) 1370
MslI CAYNNNNRTG 2 cut(s) 1058, 2357
Msp20I TGGCCA 1 cut(s) 1370
MspA1I CMGCKG 1 cut(s) 841
MspCI CTTAAG 2 cut(s) 212, 812
MspR9I CCNGG 4 cut(s) 1045, 1161, 1311, 2057
MunI CAATTG 1 cut(s) 1097
MvaI CCWGG 4 cut(s) 1045, 1161, 1311, 2057
MvnI CGCG 1 cut(s) 2147
MwoI GCNNNNNNNGC 5 cut(s) 523, 670, 1001, 1010, 1442
NdeI CATATG 1 cut(s) 1969
NdeII GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
NlaIII CATG 5 cut(s) 467, 557, 995, 1804, 2236
NlaIV GGNNCC 4 cut(s) 443, 1533, 1575, 2099
NmuCI GTSAC 4 cut(s) 627, 1293, 1627, 2027
NspI RCATGY 1 cut(s) 995
NspV TTCGAA 1 cut(s) 125
PaqCI CACCTGC 1 cut(s) 1006
PceI AGGCCT 1 cut(s) 2486
PciSI GCTCTTC 2 cut(s) 35, 453
PdmI GAANNNNTTC 1 cut(s) 2091
PflMI CCANNNNNTGG 1 cut(s) 1853
PkrI GCNGC 9 cut(s) 663, 1003, 1138, 1342, 1407, 1495, 1594, 1597, 1699
PleI GAGTC 5 cut(s) 634, 748, 1467, 1847, 2338
PmaCI CACGTG 1 cut(s) 2063
PmlI CACGTG 1 cut(s) 2063
PpsI GAGTC 5 cut(s) 634, 748, 1467, 1847, 2338
Ppu21I YACGTR 1 cut(s) 2063
PshBI ATTAAT 1 cut(s) 410
Psp6I CCWGG 4 cut(s) 1043, 1159, 1309, 2055
PspCI CACGTG 1 cut(s) 2063
PspFI CCCAGC 1 cut(s) 1723
PspGI CCWGG 4 cut(s) 1043, 1159, 1309, 2055
PspN4I GGNNCC 4 cut(s) 443, 1533, 1575, 2099
PspPI GGNCC 5 cut(s) 64, 592, 979, 1047, 1856
PstI CTGCAG 1 cut(s) 2350
PsuI RGATCY 3 cut(s) 682, 2097, 2466
RseI CAYNNNNRTG 2 cut(s) 1058, 2357
SapI GCTCTTC 2 cut(s) 35, 453
SatI GCNGC 9 cut(s) 662, 1002, 1137, 1341, 1406, 1494, 1593, 1596, 1698
Sau3AI GATC 6 cut(s) 648, 682, 1237, 2097, 2287, 2466
Sau96I GGNCC 5 cut(s) 64, 592, 979, 1047, 1856
SchI GAGTC 5 cut(s) 635, 749, 1468, 1848, 2339
ScrFI CCNGG 4 cut(s) 1045, 1161, 1311, 2057
SduI GDGCHC 1 cut(s) 1126
SfaNI GCATC 8 cut(s) 358, 1062, 1432, 1589, 1627, 1755, 2020, 2311
SfcI CTRYAG 1 cut(s) 2346
SfuI TTCGAA 1 cut(s) 125
SinI GGWCC 4 cut(s) 64, 979, 1047, 1856
SmiMI CAYNNNNRTG 2 cut(s) 1058, 2357
SmlI CTYRAG 4 cut(s) 212, 812, 2327, 2462
SmoI CTYRAG 4 cut(s) 212, 812, 2327, 2462
SseBI AGGCCT 1 cut(s) 2486
SsiI CCGC 4 cut(s) 143, 718, 841, 1405
SspI AATATT 2 cut(s) 1615, 2195
SspMI CTAG 3 cut(s) 1559, 2045, 2442
StuI AGGCCT 1 cut(s) 2486
StyD4I CCNGG 4 cut(s) 1043, 1159, 1309, 2055
StyI CCWWGG 2 cut(s) 361, 762
TaaI ACNGT 4 cut(s) 160, 474, 1366, 2383
TaiI ACGT 2 cut(s) 1988, 2065
TaqI TCGA 8 cut(s) 125, 137, 221, 314, 757, 1069, 2409, 2456
TauI GCSGC 1 cut(s) 1408
TscAI CASTG 4 cut(s) 22, 1371, 1378, 1901
TseFI GTSAC 4 cut(s) 627, 1293, 1627, 2027
TseI GCWGC 8 cut(s) 661, 1001, 1136, 1340, 1493, 1592, 1595, 1697
Tsp45I GTSAC 4 cut(s) 627, 1293, 1627, 2027
TspRI CASTG 4 cut(s) 22, 1371, 1378, 1901
Van91I CCANNNNNTGG 1 cut(s) 1853
Vha464I CTTAAG 2 cut(s) 212, 812
VpaK11BI GGWCC 4 cut(s) 64, 979, 1047, 1856
VspI ATTAAT 1 cut(s) 410
XagI CCTNNNNNAGG 1 cut(s) 1823
XapI RAATTY 4 cut(s) 248, 1165, 1204, 2087
XbaI TCTAGA 1 cut(s) 2044
XceI RCATGY 1 cut(s) 995
XcmI CCANNNNNNNNNTGG 2 cut(s) 1057, 1363
XmiI GTMKAC 1 cut(s) 549
XmnI GAANNNNTTC 1 cut(s) 2091
XspI CTAG 3 cut(s) 1559, 2045, 2442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.