Serine threonine-protein kinase ATM-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PWWP | PF00855 | 498 - 582 | 2e-11 | PWWP domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3876 |
| Acc36I | ACCTGC | 1 cut(s) | 3391 |
| AccB1I | GGYRCC | 1 cut(s) | 2054 |
| AccI | GTMKAC | 2 cut(s) | 1600, 3100 |
| AciI | CCGC | 7 cut(s) | 320, 405, 518, 1843, 2292, 2396, 3815 |
| AclWI | GGATC | 8 cut(s) | 1234, 1288, 1415, 1544, 1570, 2910, 3413, 3650 |
| AcoI | YGGCCR | 3 cut(s) | 1750, 2743, 3163 |
| AcsI | RAATTY | 5 cut(s) | 1433, 1707, 1865, 2459, 2555 |
| AcuI | CTGAAG | 9 cut(s) | 1047, 1074, 1284, 2620, 2979, 3198, 3207, 3305, 3875 |
| AcyI | GRCGYC | 1 cut(s) | 3873 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1379, 1559, 2752, 2909, 2937, 3856, 3857, 3985 |
| AflIII | ACRYGT | 1 cut(s) | 2826 |
| AhlI | ACTAGT | 1 cut(s) | 1603 |
| AjiI | CACGTC | 1 cut(s) | 2829 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1215, 1247 |
| Alw21I | GWGCWC | 3 cut(s) | 3231, 3670, 3995 |
| Alw26I | GTCTC | 4 cut(s) | 182, 257, 2219, 3632 |
| Alw44I | GTGCAC | 1 cut(s) | 3666 |
| AlwI | GGATC | 8 cut(s) | 1234, 1288, 1415, 1544, 1570, 2910, 3413, 3650 |
| Ama87I | CYCGRG | 1 cut(s) | 68 |
| AoxI | GGCC | 8 cut(s) | 1182, 1369, 1532, 1750, 2743, 3004, 3163, 3973 |
| ApaLI | GTGCAC | 1 cut(s) | 3666 |
| ApeKI | GCWGC | 8 cut(s) | 35, 377, 515, 2011, 2408, 2567, 2577, 2819 |
| ApoI | RAATTY | 5 cut(s) | 1433, 1707, 1865, 2459, 2555 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3631, 3663 |
| AseI | ATTAAT | 1 cut(s) | 579 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1833, 3708 |
| AspLEI | GCGC | 3 cut(s) | 316, 2321, 3765 |
| AspS9I | GGNCC | 8 cut(s) | 1370, 1400, 1814, 2426, 3005, 3284, 3620, 3860 |
| AsuC2I | CCSGG | 2 cut(s) | 69, 70 |
| AsuII | TTCGAA | 2 cut(s) | 99, 2795 |
| AvaI | CYCGRG | 1 cut(s) | 68 |
| AvaII | GGWCC | 6 cut(s) | 1400, 1814, 2426, 3284, 3620, 3860 |
| AxyI | CCTNAGG | 2 cut(s) | 183, 3565 |
| BaeGI | GKGCMC | 2 cut(s) | 2004, 3670 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3282, 3315 |
| BalI | TGGCCA | 2 cut(s) | 2745, 3165 |
| BanI | GGYRCC | 1 cut(s) | 2054 |
| BanII | GRGCYC | 2 cut(s) | 2664, 3995 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1584, 1616, 2333, 2365 |
| BbsI | GAAGAC | 6 cut(s) | 717, 966, 1133, 1272, 2526, 2820 |
| Bbv12I | GWGCWC | 3 cut(s) | 3231, 3670, 3995 |
| BbvI | GCAGC | 8 cut(s) | 22, 389, 527, 1998, 2420, 2564, 2579, 2806 |
| BceAI | ACGGC | 1 cut(s) | 1737 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1179, 1213, 2009, 2043 |
| BciVI | GTATCC | 2 cut(s) | 628, 2595 |
| BclI | TGATCA | 2 cut(s) | 946, 1468 |
| BcnI | CCSGG | 2 cut(s) | 69, 70 |
| BcoDI | GTCTC | 4 cut(s) | 182, 257, 2219, 3632 |
| BcuI | ACTAGT | 1 cut(s) | 1603 |
| BfmI | CTRYAG | 7 cut(s) | 1554, 1722, 1987, 2565, 2677, 2859, 3980 |
| BfoI | RGCGCY | 2 cut(s) | 2322, 3766 |
| BfuAI | ACCTGC | 1 cut(s) | 3391 |
| BfuI | GTATCC | 2 cut(s) | 628, 2595 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3245 |
| BglII | AGATCT | 1 cut(s) | 3304 |
| BisI | GCNGC | 8 cut(s) | 36, 378, 516, 2012, 2409, 2568, 2578, 2820 |
| BlsI | GCNGC | 8 cut(s) | 37, 379, 517, 2013, 2410, 2569, 2579, 2821 |
| BmcAI | AGTACT | 1 cut(s) | 1673 |
| Bme18I | GGWCC | 6 cut(s) | 1400, 1814, 2426, 3284, 3620, 3860 |
| BmeT110I | CYCGRG | 1 cut(s) | 68 |
| BmgBI | CACGTC | 1 cut(s) | 2829 |
| BmgT120I | GGNCC | 8 cut(s) | 1370, 1400, 1814, 2426, 3005, 3284, 3620, 3860 |
| BmiI | GGNNCC | 9 cut(s) | 456, 1401, 2056, 2065, 3249, 3285, 3429, 3622, 3861 |
| BmrI | ACTGGG | 1 cut(s) | 2383 |
| BmuI | ACTGGG | 1 cut(s) | 2383 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2431 |
| BpiI | GAAGAC | 6 cut(s) | 717, 966, 1133, 1272, 2526, 2820 |
| BpmI | CTGGAG | 5 cut(s) | 1472, 2485, 3921, 3932, 3977 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1923, 3030 |
| Bpu14I | TTCGAA | 2 cut(s) | 99, 2795 |
| BpuEI | CTTGAG | 2 cut(s) | 153, 2158 |
| BpuMI | CCSGG | 2 cut(s) | 69, 70 |
| BsaBI | GATNNNNATC | 2 cut(s) | 696, 945 |
| BsaHI | GRCGYC | 1 cut(s) | 3873 |
| BsaI | GGTCTC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 7 cut(s) | 68, 429, 1403, 2881, 3422, 3786, 3850 |
| BsaWI | WCCGGW | 1 cut(s) | 457 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1379, 1559, 2752, 2909, 2937, 3856, 3857, 3985 |
| Bse21I | CCTNAGG | 2 cut(s) | 183, 3565 |
| Bse3DI | GCAATG | 3 cut(s) | 1429, 2269, 2961 |
| Bse8I | GATNNNNATC | 2 cut(s) | 696, 945 |
| BseDI | CCNNGG | 7 cut(s) | 68, 429, 1403, 2881, 3422, 3786, 3850 |
| BseGI | GGATG | 9 cut(s) | 697, 742, 946, 1465, 1581, 1626, 2707, 2946, 3216 |
| BseJI | GATNNNNATC | 2 cut(s) | 696, 945 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1379, 1559, 2752, 2909, 2937, 3856, 3857, 3985 |
| BseMI | GCAATG | 3 cut(s) | 1429, 2269, 2961 |
| BseRI | GAGGAG | 5 cut(s) | 200, 228, 3529, 3532, 3539 |
| BseSI | GKGCMC | 2 cut(s) | 2004, 3670 |
| BseXI | GCAGC | 8 cut(s) | 22, 389, 527, 1998, 2420, 2564, 2579, 2806 |
| BseYI | CCCAGC | 1 cut(s) | 38 |
| BshFI | GGCC | 8 cut(s) | 1184, 1371, 1534, 1752, 2745, 3006, 3165, 3975 |
| BshNI | GGYRCC | 1 cut(s) | 2054 |
| BsiHKAI | GWGCWC | 3 cut(s) | 3231, 3670, 3995 |
| BsiHKCI | CYCGRG | 1 cut(s) | 68 |
| BsiSI | CCGG | 2 cut(s) | 69, 458 |
| BslFI | GGGAC | 6 cut(s) | 51, 163, 2910, 3297, 3557, 3873 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1379, 1559, 2752, 2909, 2937, 3856, 3857, 3985 |
| BsmAI | GTCTC | 4 cut(s) | 182, 257, 2219, 3632 |
| BsmFI | GGGAC | 6 cut(s) | 51, 163, 2910, 3297, 3557, 3873 |
| BsmI | GAATGC | 1 cut(s) | 3482 |
| BsnI | GGCC | 8 cut(s) | 1184, 1371, 1534, 1752, 2745, 3006, 3165, 3975 |
| Bso31I | GGTCTC | 1 cut(s) | 257 |
| BsoBI | CYCGRG | 1 cut(s) | 68 |
| Bsp119I | TTCGAA | 2 cut(s) | 99, 2795 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2004, 2664, 3231, 3670, 3995 |
| Bsp1407I | TGTACA | 3 cut(s) | 391, 529, 3841 |
| BspACI | CCGC | 7 cut(s) | 320, 405, 518, 1843, 2292, 2396, 3815 |
| BspANI | GGCC | 8 cut(s) | 1184, 1371, 1534, 1752, 2745, 3006, 3165, 3975 |
| BspHI | TCATGA | 2 cut(s) | 1546, 2653 |
| BspLI | GGNNCC | 9 cut(s) | 456, 1401, 2056, 2065, 3249, 3285, 3429, 3622, 3861 |
| BspMAI | CTGCAG | 1 cut(s) | 2569 |
| BspMI | ACCTGC | 1 cut(s) | 3391 |
| BspPI | GGATC | 8 cut(s) | 1234, 1288, 1415, 1544, 1570, 2910, 3413, 3650 |
| BspT104I | TTCGAA | 2 cut(s) | 99, 2795 |
| BspT107I | GGYRCC | 1 cut(s) | 2054 |
| BspTNI | GGTCTC | 1 cut(s) | 257 |
| BsrDI | GCAATG | 3 cut(s) | 1429, 2269, 2961 |
| BsrGI | TGTACA | 3 cut(s) | 391, 529, 3841 |
| BssECI | CCNNGG | 7 cut(s) | 68, 429, 1403, 2881, 3422, 3786, 3850 |
| BssNAI | GTATAC | 1 cut(s) | 3101 |
| BssNI | GRCGYC | 1 cut(s) | 3873 |
| BssT1I | CCWWGG | 2 cut(s) | 2881, 3786 |
| Bst1107I | GTATAC | 1 cut(s) | 3101 |
| BstACI | GRCGYC | 1 cut(s) | 3873 |
| BstAUI | TGTACA | 3 cut(s) | 391, 529, 3841 |
| BstBI | TTCGAA | 2 cut(s) | 99, 2795 |
| BstC8I | GCNNGC | 2 cut(s) | 318, 2009 |
| BstDSI | CCRYGG | 1 cut(s) | 429 |
| BstEII | GGTNACC | 1 cut(s) | 3352 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1377, 3983 |
| BstF5I | GGATG | 9 cut(s) | 697, 742, 946, 1465, 1581, 1626, 2707, 2946, 3216 |
| BstH2I | RGCGCY | 2 cut(s) | 2322, 3766 |
| BstHHI | GCGC | 3 cut(s) | 316, 2321, 3765 |
| BstMAI | GTCTC | 4 cut(s) | 182, 257, 2219, 3632 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 377, 2008, 2017, 3068, 3245, 3704 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2431 |
| BstPI | GGTNACC | 1 cut(s) | 3352 |
| BstSFI | CTRYAG | 7 cut(s) | 1554, 1722, 1987, 2565, 2677, 2859, 3980 |
| BstSLI | GKGCMC | 2 cut(s) | 2004, 3670 |
| BstV1I | GCAGC | 8 cut(s) | 22, 389, 527, 1998, 2420, 2564, 2579, 2806 |
| BstV2I | GAAGAC | 6 cut(s) | 717, 966, 1133, 1272, 2526, 2820 |
| BstX2I | RGATCY | 5 cut(s) | 1239, 2915, 3304, 3418, 3655 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1192 |
| BstYI | RGATCY | 5 cut(s) | 1239, 2915, 3304, 3418, 3655 |
| BstZ17I | GTATAC | 1 cut(s) | 3101 |
| Bsu36I | CCTNAGG | 2 cut(s) | 183, 3565 |
| BsuI | GTATCC | 2 cut(s) | 628, 2595 |
| BsuRI | GGCC | 8 cut(s) | 1184, 1371, 1534, 1752, 2745, 3006, 3165, 3975 |
| BtgI | CCRYGG | 1 cut(s) | 429 |
| BtrI | CACGTC | 1 cut(s) | 2829 |
| BtsCI | GGATG | 9 cut(s) | 697, 742, 946, 1465, 1581, 1626, 2707, 2946, 3216 |
| BtsI | GCAGTG | 1 cut(s) | 2158 |
| BtsIMutI | CAGTG | 7 cut(s) | 288, 1260, 2158, 2256, 2448, 3127, 3786 |
| BveI | ACCTGC | 1 cut(s) | 3391 |
| Cac8I | GCNNGC | 2 cut(s) | 318, 2009 |
| CciI | TCATGA | 2 cut(s) | 1546, 2653 |
| CfoI | GCGC | 3 cut(s) | 316, 2321, 3765 |
| Cfr13I | GGNCC | 8 cut(s) | 1370, 1400, 1814, 2426, 3005, 3284, 3620, 3860 |
| Cfr9I | CCCGGG | 1 cut(s) | 68 |
| CseI | GACGC | 1 cut(s) | 2825 |
| CsiI | ACCWGGT | 2 cut(s) | 3286, 3348 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 153, 188 |
| DraI | TTTAAA | 2 cut(s) | 1108, 2443 |
| EaeI | YGGCCR | 3 cut(s) | 1750, 2743, 3163 |
| EciI | GGCGGA | 2 cut(s) | 2307, 3804 |
| Ecl136II | GAGCTC | 1 cut(s) | 3993 |
| Eco130I | CCWWGG | 2 cut(s) | 2881, 3786 |
| Eco147I | AGGCCT | 1 cut(s) | 3975 |
| Eco24I | GRGCYC | 2 cut(s) | 2664, 3995 |
| Eco31I | GGTCTC | 1 cut(s) | 257 |
| Eco32I | GATATC | 2 cut(s) | 2241, 2643 |
| Eco47I | GGWCC | 6 cut(s) | 1400, 1814, 2426, 3284, 3620, 3860 |
| Eco53kI | GAGCTC | 1 cut(s) | 3993 |
| Eco57I | CTGAAG | 9 cut(s) | 1047, 1074, 1284, 2620, 2979, 3198, 3207, 3305, 3875 |
| Eco81I | CCTNAGG | 2 cut(s) | 183, 3565 |
| Eco88I | CYCGRG | 1 cut(s) | 68 |
| Eco91I | GGTNACC | 1 cut(s) | 3352 |
| EcoICRI | GAGCTC | 1 cut(s) | 3993 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1377, 3983 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1400, 3284, 3860 |
| EcoO65I | GGTNACC | 1 cut(s) | 3352 |
| EcoRI | GAATTC | 1 cut(s) | 2555 |
| EcoRV | GATATC | 2 cut(s) | 2241, 2643 |
| EcoT14I | CCWWGG | 2 cut(s) | 2881, 3786 |
| EcoT22I | ATGCAT | 1 cut(s) | 2022 |
| EcoT38I | GRGCYC | 2 cut(s) | 2664, 3995 |
| ErhI | CCWWGG | 2 cut(s) | 2881, 3786 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2251, 2283 |
| FaqI | GGGAC | 6 cut(s) | 51, 163, 2910, 3297, 3557, 3873 |
| FauI | CCCGC | 1 cut(s) | 398 |
| FauNDI | CATATG | 2 cut(s) | 951, 2365 |
| FbaI | TGATCA | 2 cut(s) | 946, 1468 |
| FblI | GTMKAC | 2 cut(s) | 1600, 3100 |
| Fnu4HI | GCNGC | 8 cut(s) | 36, 378, 516, 2012, 2409, 2568, 2578, 2820 |
| FokI | GGATG | 9 cut(s) | 704, 749, 953, 1472, 1588, 1633, 2714, 2953, 3223 |
| FriOI | GRGCYC | 2 cut(s) | 2664, 3995 |
| Fsp4HI | GCNGC | 8 cut(s) | 36, 378, 516, 2012, 2409, 2568, 2578, 2820 |
| GlaI | GCGC | 3 cut(s) | 315, 2320, 3764 |
| GluI | GCNGC | 8 cut(s) | 36, 378, 516, 2012, 2409, 2568, 2578, 2820 |
| GsaI | CCCAGC | 1 cut(s) | 42 |
| GsuI | CTGGAG | 5 cut(s) | 1472, 2485, 3921, 3932, 3977 |
| HaeII | RGCGCY | 2 cut(s) | 2322, 3766 |
| HaeIII | GGCC | 8 cut(s) | 1184, 1371, 1534, 1752, 2745, 3006, 3165, 3975 |
| HapII | CCGG | 2 cut(s) | 69, 458 |
| HgaI | GACGC | 1 cut(s) | 2825 |
| HhaI | GCGC | 3 cut(s) | 316, 2321, 3765 |
| Hin1I | GRCGYC | 1 cut(s) | 3873 |
| Hin6I | GCGC | 3 cut(s) | 314, 2319, 3763 |
| HinP1I | GCGC | 3 cut(s) | 314, 2319, 3763 |
| HindIII | AAGCTT | 4 cut(s) | 966, 2124, 2135, 2833 |
| HpaII | CCGG | 2 cut(s) | 69, 458 |
| Hpy99I | CGWCG | 3 cut(s) | 1169, 1647, 2063 |
| HpyCH4IV | ACGT | 3 cut(s) | 2531, 2828, 3873 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 377, 2008, 2017, 3068, 3245, 3704 |
| HpySE526I | ACGT | 3 cut(s) | 2531, 2828, 3873 |
| Hsp92I | GRCGYC | 1 cut(s) | 3873 |
| HspAI | GCGC | 3 cut(s) | 314, 2319, 3763 |
| Ksp22I | TGATCA | 2 cut(s) | 946, 1468 |
| LmnI | GCTCC | 5 cut(s) | 1718, 1997, 3059, 3253, 3998 |
| Lsp1109I | GCAGC | 8 cut(s) | 22, 389, 527, 1998, 2420, 2564, 2579, 2806 |
| MabI | ACCWGGT | 2 cut(s) | 3286, 3348 |
| MaeII | ACGT | 3 cut(s) | 2531, 2828, 3873 |
| MaeIII | GTNAC | 6 cut(s) | 1583, 1873, 1960, 3116, 3182, 3352 |
| MfeI | CAATTG | 1 cut(s) | 3093 |
| MflI | RGATCY | 5 cut(s) | 1239, 2915, 3304, 3418, 3655 |
| MhlI | GDGCHC | 5 cut(s) | 2004, 2664, 3231, 3670, 3995 |
| MlsI | TGGCCA | 2 cut(s) | 2745, 3165 |
| MluNI | TGGCCA | 2 cut(s) | 2745, 3165 |
| MlyI | GAGTC | 5 cut(s) | 89, 2333, 3335, 3579, 3844 |
| MmeI | TCCRAC | 4 cut(s) | 114, 892, 1696, 2712 |
| Mox20I | TGGCCA | 2 cut(s) | 2745, 3165 |
| Mph1103I | ATGCAT | 1 cut(s) | 2022 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1833, 3708 |
| MscI | TGGCCA | 2 cut(s) | 2745, 3165 |
| MslI | CAYNNNNRTG | 4 cut(s) | 135, 591, 663, 954 |
| Msp20I | TGGCCA | 2 cut(s) | 2745, 3165 |
| MspA1I | CMGCKG | 5 cut(s) | 518, 2011, 2999, 3371, 4001 |
| MspI | CCGG | 2 cut(s) | 69, 458 |
| MunI | CAATTG | 1 cut(s) | 3093 |
| Mva1269I | GAATGC | 1 cut(s) | 3482 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 377, 2008, 2017, 3068, 3245, 3704 |
| NciI | CCSGG | 2 cut(s) | 69, 70 |
| NdeI | CATATG | 2 cut(s) | 951, 2365 |
| NlaIV | GGNNCC | 9 cut(s) | 456, 1401, 2056, 2065, 3249, 3285, 3429, 3622, 3861 |
| NmuCI | GTSAC | 1 cut(s) | 1583 |
| NsiI | ATGCAT | 1 cut(s) | 2022 |
| NspV | TTCGAA | 2 cut(s) | 99, 2795 |
| PagI | TCATGA | 2 cut(s) | 1546, 2653 |
| PceI | AGGCCT | 1 cut(s) | 3975 |
| PctI | GAATGC | 1 cut(s) | 3482 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1833, 3708 |
| PfeI | GAWTC | 9 cut(s) | 1295, 1543, 1886, 2210, 2609, 2990, 3313, 3632, 3886 |
| PfoI | TCCNGGA | 1 cut(s) | 2186 |
| PkrI | GCNGC | 8 cut(s) | 37, 379, 517, 2013, 2410, 2569, 2579, 2821 |
| PleI | GAGTC | 5 cut(s) | 88, 2332, 3335, 3578, 3843 |
| PpsI | GAGTC | 5 cut(s) | 88, 2332, 3335, 3578, 3843 |
| PpuMI | RGGWCCY | 3 cut(s) | 1400, 3284, 3860 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2431 |
| PshBI | ATTAAT | 1 cut(s) | 579 |
| Psp124BI | GAGCTC | 1 cut(s) | 3995 |
| Psp5II | RGGWCCY | 3 cut(s) | 1400, 3284, 3860 |
| PspEI | GGTNACC | 1 cut(s) | 3352 |
| PspFI | CCCAGC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 9 cut(s) | 456, 1401, 2056, 2065, 3249, 3285, 3429, 3622, 3861 |
| PspPI | GGNCC | 8 cut(s) | 1370, 1400, 1814, 2426, 3005, 3284, 3620, 3860 |
| PspPPI | RGGWCCY | 3 cut(s) | 1400, 3284, 3860 |
| PstI | CTGCAG | 1 cut(s) | 2569 |
| PsuI | RGATCY | 5 cut(s) | 1239, 2915, 3304, 3418, 3655 |
| PvuII | CAGCTG | 4 cut(s) | 2011, 2999, 3371, 4001 |
| RseI | CAYNNNNRTG | 4 cut(s) | 135, 591, 663, 954 |
| SacI | GAGCTC | 1 cut(s) | 3995 |
| SatI | GCNGC | 8 cut(s) | 36, 378, 516, 2012, 2409, 2568, 2578, 2820 |
| Sau96I | GGNCC | 8 cut(s) | 1370, 1400, 1814, 2426, 3005, 3284, 3620, 3860 |
| ScaI | AGTACT | 1 cut(s) | 1673 |
| SchI | GAGTC | 5 cut(s) | 89, 2333, 3335, 3579, 3844 |
| SduI | GDGCHC | 5 cut(s) | 2004, 2664, 3231, 3670, 3995 |
| SexAI | ACCWGGT | 2 cut(s) | 3286, 3348 |
| SfcI | CTRYAG | 7 cut(s) | 1554, 1722, 1987, 2565, 2677, 2859, 3980 |
| SfuI | TTCGAA | 2 cut(s) | 99, 2795 |
| SinI | GGWCC | 6 cut(s) | 1400, 1814, 2426, 3284, 3620, 3860 |
| SmaI | CCCGGG | 1 cut(s) | 70 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 135, 591, 663, 954 |
| SmlI | CTYRAG | 2 cut(s) | 168, 2173 |
| SmoI | CTYRAG | 2 cut(s) | 168, 2173 |
| SpeI | ACTAGT | 1 cut(s) | 1603 |
| SseBI | AGGCCT | 1 cut(s) | 3975 |
| SsiI | CCGC | 7 cut(s) | 320, 405, 518, 1843, 2292, 2396, 3815 |
| SspI | AATATT | 2 cut(s) | 333, 471 |
| SstI | GAGCTC | 1 cut(s) | 3995 |
| StuI | AGGCCT | 1 cut(s) | 3975 |
| StyI | CCWWGG | 2 cut(s) | 2881, 3786 |
| TaiI | ACGT | 3 cut(s) | 2534, 2831, 3876 |
| TaqI | TCGA | 8 cut(s) | 99, 1199, 1298, 1645, 1798, 1972, 2327, 2795 |
| TatI | WGTACW | 4 cut(s) | 391, 529, 1671, 3841 |
| TfiI | GAWTC | 9 cut(s) | 1295, 1543, 1886, 2210, 2609, 2990, 3313, 3632, 3886 |
| TscAI | CASTG | 7 cut(s) | 295, 1267, 2158, 2256, 2455, 3127, 3786 |
| TseFI | GTSAC | 1 cut(s) | 1583 |
| TseI | GCWGC | 8 cut(s) | 35, 377, 515, 2011, 2408, 2567, 2577, 2819 |
| Tsp45I | GTSAC | 1 cut(s) | 1583 |
| TspGWI | ACGGA | 3 cut(s) | 749, 2076, 3520 |
| TspMI | CCCGGG | 1 cut(s) | 68 |
| TspRI | CASTG | 7 cut(s) | 295, 1267, 2158, 2256, 2455, 3127, 3786 |
| VneI | GTGCAC | 1 cut(s) | 3666 |
| VpaK11BI | GGWCC | 6 cut(s) | 1400, 1814, 2426, 3284, 3620, 3860 |
| VspI | ATTAAT | 1 cut(s) | 579 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1377, 3983 |
| XapI | RAATTY | 5 cut(s) | 1433, 1707, 1865, 2459, 2555 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2370 |
| XmaI | CCCGGG | 1 cut(s) | 68 |
| XmiI | GTMKAC | 2 cut(s) | 1600, 3100 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1833, 3708 |
| ZraI | GACGTC | 1 cut(s) | 3874 |
| ZrmI | AGTACT | 1 cut(s) | 1673 |
| Zsp2I | ATGCAT | 1 cut(s) | 2022 |