RLG00000001961

Serine threonine-protein kinase ATM-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
23597031 .. 23600969
3939 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001961

Sequence Viewer

Length: 3939 bp
ATGGAGACTCCCAAAACCCCAGAAACCCTAGAAGCTCAGAACTCTGGGGGTAACACCCTAGCAGAGGCTGCTGGGTTCTTAGACTGGAATGAAAGCTGTCCTGGGTTAGAAGAGTCTTTTTCCAACATTTTCGAAAGTAATGGAAGAAGAGATGATTTTGGTCATAATCATGTTGGGCTTGGGACTATGGAAGTGGCAACTCAAGCGGTGCAACTTGAGGAAACAATGTTAGATGGTAGTAAAGGAGGAGTTTTGGAATTAGGTGTGGATGAAACAATGTCTGGGGTCGGAAACAGTTGCGTGAATGATTTTGGGTTCGGCACTGTGGAAGTGGCAACTCAAATGGCGGAAGAGGACGAAACAATATTAGATGGTACTAAAAGAGAAGATTTGGAATTGGGAGCTGGTGCAGTGATTTCTGGTGTACAGAAGAGTTGCAGGAATGATTTTGGGTTCGGCACTGTGGAAGTCGCAAATCAAATGGTGGAACCAGAGGAAACAATATTAGATGGTACTAAAAGAGAAGATTTGGAATTGGGTGTTGATGCAGCGGTTTCTGGTGCACAGAAGAGTTGCGTGAATGGGATTGGGGTGGAAGAGGTTTATATCGTTAATACTCATGTTGATGTGGGAGATGAGGCTCAGATGGTATCCAAACTGTTGCAATCAGAAAAGGAAAATGACCATCAGAATGTTTCTGTGGAGTTAAAGTCTGTGGATGATGATCGTACAAATGAAGACAAAGCATTAGGGCTGAGTATGGATGGTAGTCAGAGAGATGATGATGGGGTTAAGAAGATGTTTGAAGATGTTAAAGTAGAGAAGATGGTTGAAGATTTTAGAGTTGAGAAGATGGTTGAAGATGGTGGAGTTGAGAAAATGGTTGGATATGATGGAGTTCAAAAGATAGTGGATGATGATCATATGAATGAAGACAAGGTTTCAGGATTGAGTATGGGTGGTGGTCAGAAAGAAGATGATGGAGTTGAGAAAATGTCTGAAGATGGTGGTGATGAGAAGATGTCTGAATATGGTGGAGTTGAGAAGACGGTTGAAGATGATTTAGTAGAGAAGGCAAAGGACGACGATGGTATGAATGAGGCCAAAGCATTGGCATCAAGTATCGGTGGTAGTCAAAGAGAAGATGATGTTGGGAAGATCCTTGTGGACGATGGTATCACTGAAGACAAAGCATTGGGATCAGATGGGATGGAATCGGCTGTTGATTTAACTGGCAACAAGCAAGAAGTTTCTGGTGACGGTATTTCGCTGTTTGTGGATTTTACTGGCCCTCCACCAGGATTTATTGTTGATATGGGTCCTGGGATCACAAGCAAGGGCAATGCACAAGAATTTGGAGATGATGAACTGGAGAAGGGTGAAGATGATCAAGATTATGATTTTTCTGTGGGTGATATTGTATGGGTTAAAACCAAAATAAAGACATGGTGGCCTGGTAGAATTCATGATCCTGTAGATGCATCAAAGTACGGGATGGTTAGTGACCAAGAAGGCTGTCTACTAGTTGGGTACTTTGGAATGGGTCATGTTGCTTGGTGCCGTCGATACCAACTAAAGCCCTTCCCTCAGTACTTTGAGCAGATTTCAGGGCAAAGCAAGGCTAGAATTTTTGTTGGAGCTGTAGAGAAAGCTCTTGAAGAGTTTGGTGGCCGTGTAAAATTGAATATGACTTGTGCCTGTATTTTGAAAGAAAATCGACTGTCAGTTGATGGTCCAGCATCTAAGGAAGGAGTTCCTGACCGCAACTCTAGTGAACTTGGTGAATTTTCAGTTACTCATTTTGATTCTGCAAAGTTCCTTGCACATCTGAAAAATCTTGCTCAGGTTGTTTCCAAAGTTGGCATACTTGATTATACTGTTACACTTGGTCGATTATCAGCCTTCTATAGCTCCACAGGGCACAGCCAGCTGCCAATGCATCTACTTCAGGAAGGAAATGATGCTGAAAGTGGTGCCGATGGAACCTTGCTGACGCAAACAGATGAAACTATCTTACATCAAGAAAAGAATGACGAGAATGAAGCTTTTGCAAAGCTTTTTGGTGGGGGCAGTGCTGACAAAACTTCCATCTCAAGTTCAAAGTCCAGGAAGAGAAAGATGAAGAGGGATTCTGAAATTGAAGAGACTAGCCCAGTGATATCCGTGACAGTGAAAGAGAGCAATGCTTCCAGTCTAGGAAATGTTGATGGCGGAAATGAAGGAATGATTGAAATAGGCGCCGAGTTGAGAGAGAGGAAGAAGAGTAGGTACTTGTCTTACCCATACGTAAACTGGGGGCAGAAAGGATTGTCTGCGGAAGGAATGGCTGCAACTACTGATGGTGGACCACCTTCAAATTTTAAAAGCACCGGTGAGAAATTCTGGAGGAAATGGTATAGGAGGTTTACTGGTGTGAATAACATATCTGGTGATTCAAATGTGAAAAATACATCTTCTGCTGAGTTGCTTTCTGAATTCTGCTCTGCAGCCGTCAGCTGCCAGTATCCGATTGAAAATAAAGCATTTGATTCAGTTGCTTGGTTCATCTCTAACTTCAGGATATCAGTATTTCATGACGAGCCTATTTGTGAAACCTACAGTAAGAACATGGCTGGTCAGGATGAGGATAAAGATGCCGAGCCTTGGCTGTTGGAAAATGGTGGTCAGAATGAGGCTAAATCTGAGCCAAAGAAAAGAAATAAAAAGGCAGTTTCGAAGCATTCAGAGGGTGAAGACGCTGCCAACACATTGAGCTTAGTTCAAAGCCCTGCAACTGCTGTAGAGGGTATGAATGGAAACCTTGGCAAGAAAAGGGGACGACCAAAGTTAGGGAGATCCAAGACTAAATCCCTTTCTGGGATGTCAGATGTCAATACAAGCATTGCCTCCGATGTCCAAATGGTACAAGATTCTTCAGCTGTCGGCCCTCTCATGCCCTGTGATAAGGCTAAGCGAAAGAAAAGAGAGAAGGGGGAAGGAGCAAGTCAGGCAAGTTTGCAGACTAGACAAACAATTGGTATACCTGATTTGAATGGTAACAGTGTTCTACCTACTGTTTTGGTTAATGATCAACTGACTATTGGCCATGCTGCTTCTGAAGGTAACATTCAACTAGAAAAGAGATTGGGCACTGAAACTGCTTCAGAGCACTTAATATCCAATATGGCTACTGGCATGGTAGATGCTAATGGAAACAATTTGAAACCTGGTACATTGGTTGTAGATCTGGGGATTCCTCTTCAGGCTTTGCCATGCCTGGACTCTAACCAGGTTACCACCCTACTCTCAGCTGATAGTAAACCTGCCCCGAAAAAGAGAAAGAGAAAGGAGAAAGTAGATCCAGGGGTTCCTGTTCAAGCTGACGGTATTCCAGATTTGAATGGAAATGGTGCTGAATGCCTTACACCTCCAAGTAAACCCGAGCGGAAGAAGAGGAGGAGAAAAGGAGAAGGTCTAGCAACTGCTCTCCTCTTGACCTTTGCCTCAGGAGTCCCAATGCCTTCAAAAGATGATTTAATTTCAACATTTTGTAGGTTTGGACCCTTGAAAGAATCGGAGACACAGTTTTTAAAAGATCCTAGTAGTGCACAGGTTGTATTCATGGAAAGTGCTGATGCTGGAGAAGCATTTCAGAGTTTAGAAAAGAACAACCCTTTTGGCACCAACCTTGTATCTTACAGGCGCTTTAATCTTCCATCAGTGTCCAAGGTTTTAGCCACAAGCCTAGCCTCTCCGCCTACAAAGAGATTGCTGAGTCCTGTACAATCGCCTGGCAAGGGACCTTGCCTTGGCGTCATAAGGCAGAATCTTCAGATGATGACATCAATGCTGGAGAAGTCAGGTGATACTCTTTCTCCAGAGATGAGAACCAAACTGGAGTGTGAAATAAAAGGCCTCCTACAGAAGGTGAGCTCCACAGCTGGTTCTTCCTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1313

Amino Acids

141.44

Weight (kDa)

4.81

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 471 - 555 8.5e-12 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3310
AccB1I GGYRCC 4 cut(s) 1557, 1973, 2237, 3659
AccBSI CCGCTC 1 cut(s) 3424
AccI GTMKAC 2 cut(s) 1519, 3019
AciI CCGC 8 cut(s) 206, 347, 551, 1762, 2211, 2315, 3424, 3734
AclWI GGATC 7 cut(s) 1153, 1207, 1334, 1463, 2829, 3332, 3569
AcoI YGGCCR 2 cut(s) 1669, 3082
AcsI RAATTY 7 cut(s) 1352, 1461, 1626, 1784, 2356, 2378, 2474
AcuI CTGAAG 9 cut(s) 1020, 1203, 1931, 2539, 2898, 3117, 3126, 3224, 3794
AcyI GRCGYC 2 cut(s) 2238, 3792
AfiI CCNNNNNNNGG 8 cut(s) 64, 1298, 2643, 2828, 2856, 3776, 3788, 3904
AgeI ACCGGT 1 cut(s) 2369
AhlI ACTAGT 1 cut(s) 1522
AjuI GAANNNNNNNTTGG 2 cut(s) 1134, 1166
Alw21I GWGCWC 4 cut(s) 565, 3150, 3589, 3914
Alw26I GTCTC 2 cut(s) 2138, 3551
Alw44I GTGCAC 2 cut(s) 561, 3585
AlwI GGATC 7 cut(s) 1153, 1207, 1334, 1463, 2829, 3332, 3569
AlwNI CAGNNNCTG 1 cut(s) 68
Ama87I CYCGRG 1 cut(s) 3419
AoxI GGCC 7 cut(s) 1101, 1288, 1451, 1669, 2923, 3082, 3892
ApaLI GTGCAC 2 cut(s) 561, 3585
ApeKI GCWGC 8 cut(s) 68, 548, 1930, 2327, 2486, 2496, 2738, 3089
ApoI RAATTY 7 cut(s) 1352, 1461, 1626, 1784, 2356, 2378, 2474
AsiGI ACCGGT 1 cut(s) 2369
Asp700I GAANNNNTTC 2 cut(s) 1752, 3627
AspLEI GCGC 2 cut(s) 2240, 3684
AspS9I GGNCC 7 cut(s) 1289, 1319, 1733, 2345, 2924, 3539, 3779
AsuII TTCGAA 2 cut(s) 132, 2714
AvaI CYCGRG 1 cut(s) 3419
AvaII GGWCC 5 cut(s) 1319, 1733, 2345, 3539, 3779
AxyI CCTNAGG 1 cut(s) 3484
BaeGI GKGCMC 4 cut(s) 565, 1923, 3131, 3589
BaeI ACNNNNGTAYC 4 cut(s) 1159, 1192, 3201, 3234
BalI TGGCCA 1 cut(s) 3084
BanI GGYRCC 4 cut(s) 1557, 1973, 2237, 3659
BanII GRGCYC 1 cut(s) 3914
BarI GAAGNNNNNNTAC 4 cut(s) 1503, 1535, 2252, 2284
BbsI GAAGAC 5 cut(s) 744, 939, 1052, 1191, 2739
Bbv12I GWGCWC 4 cut(s) 565, 3150, 3589, 3914
BbvI GCAGC 8 cut(s) 55, 560, 1917, 2314, 2483, 2498, 2725, 3076
BceAI ACGGC 3 cut(s) 1545, 1656, 2474
BciVI GTATCC 2 cut(s) 661, 2514
BclI TGATCA 3 cut(s) 919, 1387, 3067
BcoDI GTCTC 2 cut(s) 2138, 3551
BcuI ACTAGT 1 cut(s) 1522
BfmI CTRYAG 7 cut(s) 1473, 1641, 1906, 2484, 2596, 2778, 3899
BfoI RGCGCY 2 cut(s) 2241, 3685
BfuAI ACCTGC 1 cut(s) 3310
BfuI GTATCC 2 cut(s) 661, 2514
BglII AGATCT 1 cut(s) 3223
BisI GCNGC 8 cut(s) 69, 549, 1931, 2328, 2487, 2497, 2739, 3090
BlpI GCTNAGC 1 cut(s) 2949
BlsI GCNGC 8 cut(s) 70, 550, 1932, 2329, 2488, 2498, 2740, 3091
BmcAI AGTACT 1 cut(s) 1592
Bme18I GGWCC 5 cut(s) 1319, 1733, 2345, 3539, 3779
BmeT110I CYCGRG 1 cut(s) 3419
BmgT120I GGNCC 7 cut(s) 1289, 1319, 1733, 2345, 2924, 3539, 3779
BmrI ACTGGG 2 cut(s) 2147, 2302
BmuI ACTGGG 2 cut(s) 2147, 2302
BpiI GAAGAC 5 cut(s) 744, 939, 1052, 1191, 2739
BpmI CTGGAG 6 cut(s) 1391, 2404, 3639, 3840, 3851, 3896
Bpu10I CCTNAGC 1 cut(s) 1842
Bpu1102I GCTNAGC 1 cut(s) 2949
Bpu14I TTCGAA 2 cut(s) 132, 2714
BpuEI CTTGAG 3 cut(s) 186, 236, 2077
BsaAI YACGTR 1 cut(s) 2287
BsaBI GATNNNNATC 2 cut(s) 723, 918
BsaHI GRCGYC 2 cut(s) 2238, 3792
BsaJI CCNNGG 7 cut(s) 101, 1322, 2642, 2800, 3341, 3705, 3787
BsaWI WCCGGW 1 cut(s) 2369
BsaXI ACNNNNNCTCC 8 cut(s) 695, 725, 1276, 1306, 3548, 3578, 3838, 3868
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 1298, 2643, 2828, 2856, 3776, 3788, 3904
Bse118I RCCGGY 1 cut(s) 2369
Bse21I CCTNAGG 1 cut(s) 3484
Bse3DI GCAATG 3 cut(s) 1348, 2188, 2880
Bse8I GATNNNNATC 2 cut(s) 723, 918
BseDI CCNNGG 7 cut(s) 101, 1322, 2642, 2800, 3341, 3705, 3787
BseGI GGATG 8 cut(s) 274, 724, 769, 919, 1215, 1500, 2626, 2865
BseJI GATNNNNATC 2 cut(s) 723, 918
BseLI CCNNNNNNNGG 8 cut(s) 64, 1298, 2643, 2828, 2856, 3776, 3788, 3904
BseMI GCAATG 3 cut(s) 1348, 2188, 2880
BseRI GAGGAG 4 cut(s) 261, 3448, 3451, 3458
BseSI GKGCMC 4 cut(s) 565, 1923, 3131, 3589
BseXI GCAGC 8 cut(s) 55, 560, 1917, 2314, 2483, 2498, 2725, 3076
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 429
BshFI GGCC 7 cut(s) 1103, 1290, 1453, 1671, 2925, 3084, 3894
BshNI GGYRCC 4 cut(s) 1557, 1973, 2237, 3659
BshTI ACCGGT 1 cut(s) 2369
BsiHKAI GWGCWC 4 cut(s) 565, 3150, 3589, 3914
BsiHKCI CYCGRG 1 cut(s) 3419
BsiSI CCGG 1 cut(s) 2370
BslFI GGGAC 4 cut(s) 196, 2829, 3476, 3792
BslI CCNNNNNNNGG 8 cut(s) 64, 1298, 2643, 2828, 2856, 3776, 3788, 3904
BsmAI GTCTC 2 cut(s) 2138, 3551
BsmFI GGGAC 4 cut(s) 196, 2829, 3476, 3792
BsmI GAATGC 2 cut(s) 2719, 3401
BsnI GGCC 7 cut(s) 1103, 1290, 1453, 1671, 2925, 3084, 3894
BsoBI CYCGRG 1 cut(s) 3419
Bsp119I TTCGAA 2 cut(s) 132, 2714
Bsp1286I GDGCHC 6 cut(s) 565, 1923, 3131, 3150, 3589, 3914
Bsp1407I TGTACA 2 cut(s) 424, 3760
Bsp1720I GCTNAGC 1 cut(s) 2949
BspACI CCGC 8 cut(s) 206, 347, 551, 1762, 2211, 2315, 3424, 3734
BspANI GGCC 7 cut(s) 1103, 1290, 1453, 1671, 2925, 3084, 3894
BspHI TCATGA 2 cut(s) 1465, 2572
BspMAI CTGCAG 1 cut(s) 2488
BspMI ACCTGC 1 cut(s) 3310
BspPI GGATC 7 cut(s) 1153, 1207, 1334, 1463, 2829, 3332, 3569
BspT104I TTCGAA 2 cut(s) 132, 2714
BspT107I GGYRCC 4 cut(s) 1557, 1973, 2237, 3659
BsrBI CCGCTC 1 cut(s) 3424
BsrDI GCAATG 3 cut(s) 1348, 2188, 2880
BsrFI RCCGGY 1 cut(s) 2369
BsrGI TGTACA 2 cut(s) 424, 3760
BssAI RCCGGY 1 cut(s) 2369
BssECI CCNNGG 7 cut(s) 101, 1322, 2642, 2800, 3341, 3705, 3787
BssNAI GTATAC 1 cut(s) 3020
BssNI GRCGYC 2 cut(s) 2238, 3792
BssT1I CCWWGG 4 cut(s) 2642, 2800, 3705, 3787
Bst1107I GTATAC 1 cut(s) 3020
BstACI GRCGYC 2 cut(s) 2238, 3792
BstAPI GCANNNNNTGC 1 cut(s) 68
BstAUI TGTACA 2 cut(s) 424, 3760
BstBAI YACGTR 1 cut(s) 2287
BstBI TTCGAA 2 cut(s) 132, 2714
BstC8I GCNNGC 1 cut(s) 1928
BstEII GGTNACC 1 cut(s) 3271
BstENI CCTNNNNNAGG 3 cut(s) 62, 1296, 3902
BstF5I GGATG 8 cut(s) 274, 724, 769, 919, 1215, 1500, 2626, 2865
BstH2I RGCGCY 2 cut(s) 2241, 3685
BstHHI GCGC 2 cut(s) 2240, 3684
BstMAI GTCTC 2 cut(s) 2138, 3551
BstMWI GCNNNNNNNGC 6 cut(s) 68, 203, 1927, 1936, 2987, 3623
BstPI GGTNACC 1 cut(s) 3271
BstSFI CTRYAG 7 cut(s) 1473, 1641, 1906, 2484, 2596, 2778, 3899
BstSLI GKGCMC 4 cut(s) 565, 1923, 3131, 3589
BstSNI TACGTA 1 cut(s) 2287
BstV1I GCAGC 8 cut(s) 55, 560, 1917, 2314, 2483, 2498, 2725, 3076
BstV2I GAAGAC 5 cut(s) 744, 939, 1052, 1191, 2739
BstX2I RGATCY 5 cut(s) 1158, 2834, 3223, 3337, 3574
BstXI CCANNNNNNTGG 1 cut(s) 1111
BstYI RGATCY 5 cut(s) 1158, 2834, 3223, 3337, 3574
BstZ17I GTATAC 1 cut(s) 3020
Bsu36I CCTNAGG 1 cut(s) 3484
BsuI GTATCC 2 cut(s) 661, 2514
BsuRI GGCC 7 cut(s) 1103, 1290, 1453, 1671, 2925, 3084, 3894
BtsCI GGATG 8 cut(s) 274, 724, 769, 919, 1215, 1500, 2626, 2865
BtsI GCAGTG 2 cut(s) 417, 2077
BveI ACCTGC 1 cut(s) 3310
Cac8I GCNNGC 1 cut(s) 1928
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 2 cut(s) 1465, 2572
CfoI GCGC 2 cut(s) 2240, 3684
Cfr10I RCCGGY 1 cut(s) 2369
Cfr13I GGNCC 7 cut(s) 1289, 1319, 1733, 2345, 2924, 3539, 3779
CseI GACGC 3 cut(s) 2002, 2744, 3781
CsiI ACCWGGT 2 cut(s) 3205, 3267
CspAI ACCGGT 1 cut(s) 2369
DinI GGCGCC 1 cut(s) 2239
DraI TTTAAA 2 cut(s) 2362, 3570
EaeI YGGCCR 2 cut(s) 1669, 3082
EciI GGCGGA 3 cut(s) 362, 2226, 3723
Ecl136II GAGCTC 1 cut(s) 3912
Eco105I TACGTA 1 cut(s) 2287
Eco130I CCWWGG 4 cut(s) 2642, 2800, 3705, 3787
Eco147I AGGCCT 1 cut(s) 3894
Eco24I GRGCYC 1 cut(s) 3914
Eco32I GATATC 2 cut(s) 2160, 2562
Eco47I GGWCC 5 cut(s) 1319, 1733, 2345, 3539, 3779
Eco53kI GAGCTC 1 cut(s) 3912
Eco57I CTGAAG 9 cut(s) 1020, 1203, 1931, 2539, 2898, 3117, 3126, 3224, 3794
Eco81I CCTNAGG 1 cut(s) 3484
Eco88I CYCGRG 1 cut(s) 3419
Eco91I GGTNACC 1 cut(s) 3271
EcoICRI GAGCTC 1 cut(s) 3912
EcoNI CCTNNNNNAGG 3 cut(s) 62, 1296, 3902
EcoO109I RGGNCCY 2 cut(s) 1319, 3779
EcoO65I GGTNACC 1 cut(s) 3271
EcoRI GAATTC 2 cut(s) 1461, 2474
EcoRV GATATC 2 cut(s) 2160, 2562
EcoT14I CCWWGG 4 cut(s) 2642, 2800, 3705, 3787
EcoT22I ATGCAT 2 cut(s) 1483, 1941
EcoT38I GRGCYC 1 cut(s) 3914
EgeI GGCGCC 1 cut(s) 2239
EheI GGCGCC 1 cut(s) 2239
ErhI CCWWGG 4 cut(s) 2642, 2800, 3705, 3787
FaqI GGGAC 4 cut(s) 196, 2829, 3476, 3792
FauNDI CATATG 1 cut(s) 924
FbaI TGATCA 3 cut(s) 919, 1387, 3067
FblI GTMKAC 2 cut(s) 1519, 3019
Fnu4HI GCNGC 8 cut(s) 69, 549, 1931, 2328, 2487, 2497, 2739, 3090
FokI GGATG 8 cut(s) 281, 731, 776, 926, 1222, 1507, 2633, 2872
FriOI GRGCYC 1 cut(s) 3914
Fsp4HI GCNGC 8 cut(s) 69, 549, 1931, 2328, 2487, 2497, 2739, 3090
GlaI GCGC 2 cut(s) 2239, 3683
GluI GCNGC 8 cut(s) 69, 549, 1931, 2328, 2487, 2497, 2739, 3090
GsaI CCCAGC 1 cut(s) 75
GsuI CTGGAG 6 cut(s) 1391, 2404, 3639, 3840, 3851, 3896
HaeII RGCGCY 2 cut(s) 2241, 3685
HaeIII GGCC 7 cut(s) 1103, 1290, 1453, 1671, 2925, 3084, 3894
HapII CCGG 1 cut(s) 2370
HgaI GACGC 3 cut(s) 2002, 2744, 3781
HhaI GCGC 2 cut(s) 2240, 3684
Hin1I GRCGYC 2 cut(s) 2238, 3792
Hin6I GCGC 2 cut(s) 2238, 3682
HinP1I GCGC 2 cut(s) 2238, 3682
HindIII AAGCTT 2 cut(s) 2043, 2054
HpaII CCGG 1 cut(s) 2370
Hpy99I CGWCG 2 cut(s) 1088, 1566
HpyCH4IV ACGT 1 cut(s) 2286
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 203, 1927, 1936, 2987, 3623
HpySE526I ACGT 1 cut(s) 2286
Hsp92I GRCGYC 2 cut(s) 2238, 3792
HspAI GCGC 2 cut(s) 2238, 3682
KasI GGCGCC 1 cut(s) 2237
Ksp22I TGATCA 3 cut(s) 919, 1387, 3067
LmnI GCTCC 5 cut(s) 401, 1637, 1916, 2978, 3917
Lsp1109I GCAGC 8 cut(s) 55, 560, 1917, 2314, 2483, 2498, 2725, 3076
MabI ACCWGGT 2 cut(s) 3205, 3267
MaeII ACGT 1 cut(s) 2286
MaeIII GTNAC 9 cut(s) 50, 1256, 1502, 1792, 1879, 2164, 3035, 3101, 3271
MbiI CCGCTC 1 cut(s) 3424
MfeI CAATTG 1 cut(s) 3012
MflI RGATCY 5 cut(s) 1158, 2834, 3223, 3337, 3574
MhlI GDGCHC 6 cut(s) 565, 1923, 3131, 3150, 3589, 3914
MlsI TGGCCA 1 cut(s) 3084
MluNI TGGCCA 1 cut(s) 3084
Mly113I GGCGCC 1 cut(s) 2238
MlyI GAGTC 4 cut(s) 122, 3254, 3498, 3763
MmeI TCCRAC 5 cut(s) 147, 268, 865, 1615, 2631
Mox20I TGGCCA 1 cut(s) 3084
Mph1103I ATGCAT 2 cut(s) 1483, 1941
MroXI GAANNNNTTC 2 cut(s) 1752, 3627
MscI TGGCCA 1 cut(s) 3084
MslI CAYNNNNRTG 4 cut(s) 168, 624, 690, 927
Msp20I TGGCCA 1 cut(s) 3084
MspA1I CMGCKG 6 cut(s) 551, 1930, 2496, 2918, 3290, 3920
MspI CCGG 1 cut(s) 2370
MunI CAATTG 1 cut(s) 3012
Mva1269I GAATGC 2 cut(s) 2719, 3401
MwoI GCNNNNNNNGC 6 cut(s) 68, 203, 1927, 1936, 2987, 3623
NarI GGCGCC 1 cut(s) 2238
NdeI CATATG 1 cut(s) 924
NmeAIII GCCGAG 2 cut(s) 2266, 2662
NmuCI GTSAC 3 cut(s) 1256, 1502, 2164
NsiI ATGCAT 2 cut(s) 1483, 1941
NspV TTCGAA 2 cut(s) 132, 2714
PagI TCATGA 2 cut(s) 1465, 2572
PceI AGGCCT 1 cut(s) 3894
PctI GAATGC 2 cut(s) 2719, 3401
PdmI GAANNNNTTC 2 cut(s) 1752, 3627
PfeI GAWTC 9 cut(s) 1214, 1805, 2129, 2432, 2528, 2909, 3232, 3551, 3805
PfoI TCCNGGA 1 cut(s) 2105
PinAI ACCGGT 1 cut(s) 2369
PkrI GCNGC 8 cut(s) 70, 550, 1932, 2329, 2488, 2498, 2740, 3091
PleI GAGTC 4 cut(s) 121, 3254, 3497, 3762
PluTI GGCGCC 1 cut(s) 2241
PpsI GAGTC 4 cut(s) 121, 3254, 3497, 3762
Ppu21I YACGTR 1 cut(s) 2287
PpuMI RGGWCCY 2 cut(s) 1319, 3779
Psp124BI GAGCTC 1 cut(s) 3914
Psp5II RGGWCCY 2 cut(s) 1319, 3779
PspEI GGTNACC 1 cut(s) 3271
PspFI CCCAGC 1 cut(s) 71
PspPI GGNCC 7 cut(s) 1289, 1319, 1733, 2345, 2924, 3539, 3779
PspPPI RGGWCCY 2 cut(s) 1319, 3779
PstI CTGCAG 1 cut(s) 2488
PstNI CAGNNNCTG 1 cut(s) 68
PsuI RGATCY 5 cut(s) 1158, 2834, 3223, 3337, 3574
PvuII CAGCTG 5 cut(s) 1930, 2496, 2918, 3290, 3920
RseI CAYNNNNRTG 4 cut(s) 168, 624, 690, 927
SacI GAGCTC 1 cut(s) 3914
SatI GCNGC 8 cut(s) 69, 549, 1931, 2328, 2487, 2497, 2739, 3090
Sau96I GGNCC 7 cut(s) 1289, 1319, 1733, 2345, 2924, 3539, 3779
ScaI AGTACT 1 cut(s) 1592
SchI GAGTC 4 cut(s) 122, 3254, 3498, 3763
SduI GDGCHC 6 cut(s) 565, 1923, 3131, 3150, 3589, 3914
SexAI ACCWGGT 2 cut(s) 3205, 3267
SfcI CTRYAG 7 cut(s) 1473, 1641, 1906, 2484, 2596, 2778, 3899
SfoI GGCGCC 1 cut(s) 2239
SfuI TTCGAA 2 cut(s) 132, 2714
SgrAI CRCCGGYG 1 cut(s) 2369
SinI GGWCC 5 cut(s) 1319, 1733, 2345, 3539, 3779
SmiMI CAYNNNNRTG 4 cut(s) 168, 624, 690, 927
SmlI CTYRAG 3 cut(s) 201, 215, 2092
SmoI CTYRAG 3 cut(s) 201, 215, 2092
SnaBI TACGTA 1 cut(s) 2287
SpeI ACTAGT 1 cut(s) 1522
SseBI AGGCCT 1 cut(s) 3894
SsiI CCGC 8 cut(s) 206, 347, 551, 1762, 2211, 2315, 3424, 3734
SspDI GGCGCC 1 cut(s) 2237
SspI AATATT 2 cut(s) 366, 504
SstI GAGCTC 1 cut(s) 3914
StuI AGGCCT 1 cut(s) 3894
StyI CCWWGG 4 cut(s) 2642, 2800, 3705, 3787
TaiI ACGT 1 cut(s) 2289
TaqI TCGA 5 cut(s) 132, 1564, 1717, 1891, 2714
TatI WGTACW 3 cut(s) 424, 1590, 3760
TfiI GAWTC 9 cut(s) 1214, 1805, 2129, 2432, 2528, 2909, 3232, 3551, 3805
TseFI GTSAC 3 cut(s) 1256, 1502, 2164
TseI GCWGC 8 cut(s) 68, 548, 1930, 2327, 2486, 2496, 2738, 3089
Tsp45I GTSAC 3 cut(s) 1256, 1502, 2164
TspGWI ACGGA 1 cut(s) 2152
VneI GTGCAC 2 cut(s) 561, 3585
VpaK11BI GGWCC 5 cut(s) 1319, 1733, 2345, 3539, 3779
XagI CCTNNNNNAGG 3 cut(s) 62, 1296, 3902
XapI RAATTY 7 cut(s) 1352, 1461, 1626, 1784, 2356, 2378, 2474
XcmI CCANNNNNNNNNTGG 1 cut(s) 2289
XmiI GTMKAC 2 cut(s) 1519, 3019
XmnI GAANNNNTTC 2 cut(s) 1752, 3627
ZrmI AGTACT 1 cut(s) 1592
Zsp2I ATGCAT 2 cut(s) 1483, 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.