Rh7CG379200

Serine threonine-protein kinase ATM-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001132
Physical Location & Seq
Forward (+)
47845353 .. 47848019
2667 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG379200.1

Sequence Viewer

Length: 2667 bp
ATGGTTGAAGAATTTAGAGTTGAGAAGATGATGGTTGAAGATGTTGGAGTTAAGGAGAAGGTGGATGAGGCCAAAGCATTTGAATCGAGTATGATGGGTGAAGATGATCAAGATTATGATTTTTGTGTGGGTGATATTGTGTGGGTTAAAACCAAAATAAACACATGGTGGCCTGCTAGAATTCATGATCCTGCAGATGCATCAAAGTACGGAGGAATTGAAAGTGACCAGGAAGACTGTCTACTAGTTGGCTACTTTGGGATGGGTCATGTTGCCTGGTGCCGTCGATACCAACTGAAGCCTTTCCCCAAGTATTTCGAGCAGATTTCAGGGCAGAGCAAGGCTAGAATTTTCGTTAAAGCTGTAGAGAAAGCTCTTGAAGAGTTTGGTCGCCGTGTCAAATTGAATATGACTTGTGCCTGTGTTTTGAAAGAAAATCGACTTTCAGTTGATGATGCTGCATCTAAGGAAGGAGTTTTGGCTCCTGACCGCAGCTCCAGTGAACTCGGTGAATTTTCAGTTACGCATTTTGATTCTGCAAAGTTCCTTGCACATCTGAAAAATCTTGCACAGGTTGTTTCCAAAGTTGGTGTACTTGATTATACTGTTACACGTAGTCGATTATCGGCCTTCTGTACCTCCACAGGGCACAGGCAGCGGCCTATGCATCTACTTCAGGAAGGAAATGATGCTGAAAGTGGTGACGATGGAACCTTGCTGAAGCAAGCAGAGGAAAATGTTTTACATCAAGAGAAGAATGACGAGAATGAATCTTTTGCAAAGGTTTTTGGTGGGGGCAGTGCCGATAAAACTTCCATCTCAAGTTCAAAGTCCAGGAAGAGAAAGATGAAGAGGGATTCTGAAATTGAAGAGACTAGCCTCATGATATCCCCAACAGTGAAAGAGAGCAAGGCCTCTAGTGTAGTAAATGGTGATGGCGGGAATGAAGGAATGATTGAAATAGGCGCCGAGTCTAGAGAGAGAAAGAAGAGTAGGTACTTGTCTTACCCATACATAAATGTGGGGCAGAAAGGATTGTCTGCGGAAGGAATGGCGGCAACAATTGATGGTGGACCCCCTTCAAATTTTAAAAGCACTGGTGAGAAGTTCTGGAGGAAATGGTATAGGAGGTTTACTGGTGTGAGTAACATATCTGGTGATTCATATTTGAAAAATGCATCTTCTGCTGAGTTGCTTTCTGAATTCTGCTCTGCAGCCATTGACTGCCAGTATCCGATTGAAAATAAAGCATTTCATTCAGTTGCTTGGTTCATCTCTAACTTTAGGATATCAGTATTTCATGACGAGCCTTTTTGTGAAACCTACAGTAAGAACATGGCTGGTCAGGATGAGGATAGAGATGCTGAGACTTGCCTGTTGGAAAATGGTGGCCAGAATGAGGCTAAATCTGAGCCAAAGAAAAGAAATAAAAAGGCAGTTTCGAAGCATCTAGAGGGTGAAGATGCTGCCAACACGTCAAGCTTAGTTCAAAGCCCTGCAACTGCTGTAGAGGGTATGAATGGAAACCTTGGCAAGAAAAGGGGACGACCAAAGTTAGGGAGATCCAAGACTAAATCCCTTTCTGGGATGTCAGATGTCAATACAAGCATTGCCCCTGATGGCCAAATGGTACAAGATTCTTCAGCTGTCGGCCCTCTCATGCCCTGTGATAAGCCTAAGCAAAAGAAAAGAGAGAAGGTGGAAGGAGCAAGTCAAGCAAGTTTGCAGACTAAACAAACAATTGGTATACCTGATTTGAATGGTAACAGTGTTCTACCTACCGTTCTGGTTAATAAACAACAGACTATTGGCCATGCTGTTTCTGAAGGTAACATTCAGCTAGAAAAGAGATTGGGGACGGAAACTGCTTCAGAGCACTCAATATCCAACATGGCTCCTGGCTTAGTAGATGCCAATGGAAACAATTTGAAACCTGGTACATTGGTTGTAGATCTGGGGATTCATGCTCAGGCTTTGGCATGCCTGGACTCTAAACAGGTGACCAGCCTGCTCACAGCTGAGAGTAAACCTGCCCCGAAAAAGAGAAAGAGAAAGGATAAAGTAGATCCGGGGTTTCCTGTTCAAGCTGACGGTATTCCAGATTTGAATGGAAATAGTGCTGAATGCCTTACACCTTCAAGTAAACCTGAGCGGAAGAGGAGGAGGAGAAAAGGAGAAGGTCTAGCAACCGCTCTCCTCTTGACATTTGCGTCCGGAATTCCACTGCCTTCAAAAGATGATTTAATCTCAACATTTTGTAGGTTTGGACCCTTGAAAGAATCGGAGACTCAGTTATTAAAAGATTCTAGTAGTGCACAGGTTGTATTCATGGAAAGTGCTGATGCTGGAGAGGCATTTCAGAGTTTAGAGAAGAACAACCCTTTTGGCACAAACCTTGTTGCTTACAAGCGCTTTAATCTTCCATCAGTGTCCAAGGTTTTAGCCACAAGCCTATCCTCTCCGCCTACTAAGAGATTGGTGACTCCTGTACAATCGCCTGCCAAGGGACCTTGCCTTGACACCATAAGGCAGAATCTTCAGATGATGACATCAATGCTGGAGACTTCAGGTGATACTCTTTCTCCAGAGATGAGAGCCAAACTGGAGTGTGAAATAAAAGGCCTCCTACAGAAGGTGAGCTCCACAGCTGGTTCGTCCTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

888

Amino Acids

96.85

Weight (kDa)

8.14

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 44 - 129 3.5e-13 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2209
Acc36I ACCTGC 1 cut(s) 2038
AccB1I GGYRCC 2 cut(s) 279, 965
AccBSI CCGCTC 2 cut(s) 2152, 2192
AccI GTMKAC 2 cut(s) 241, 1747
AccIII TCCGGA 1 cut(s) 2213
AciI CCGC 8 cut(s) 490, 658, 939, 1043, 1055, 2152, 2190, 2462
AclWI GGATC 3 cut(s) 182, 1557, 2060
AcoI YGGCCR 3 cut(s) 1390, 1621, 1810
AcsI RAATTY 7 cut(s) 11, 180, 348, 512, 1084, 1202, 2217
AcuI CTGAAG 8 cut(s) 317, 659, 740, 1626, 1845, 1854, 2522, 2550
AcyI GRCGYC 1 cut(s) 966
AdeI CACNNNGTG 1 cut(s) 168
AfaI GTAC 7 cut(s) 209, 594, 637, 998, 1632, 1939, 2490
AfeI AGCGCT 1 cut(s) 2411
AfiI CCNNNNNNNGG 6 cut(s) 645, 1399, 1556, 1584, 2504, 2632
AflIII ACRYGT 2 cut(s) 611, 1473
AhlI ACTAGT 1 cut(s) 244
AjiI CACGTC 1 cut(s) 1476
AjnI CCWGG 6 cut(s) 228, 275, 833, 1897, 1933, 1983
Alw21I GWGCWC 3 cut(s) 1878, 2317, 2642
Alw26I GTCTC 4 cut(s) 866, 1361, 2279, 2555
Alw44I GTGCAC 1 cut(s) 2313
AlwI GGATC 3 cut(s) 182, 1557, 2060
Aor13HI TCCGGA 1 cut(s) 2213
Aor51HI AGCGCT 1 cut(s) 2411
ApaLI GTGCAC 1 cut(s) 2313
ApeKI GCWGC 5 cut(s) 458, 492, 655, 1214, 1466
ApoI RAATTY 7 cut(s) 11, 180, 348, 512, 1084, 1202, 2217
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 2 cut(s) 968, 2412
AspS9I GGNCC 4 cut(s) 1073, 1652, 2267, 2507
AsuC2I CCSGG 1 cut(s) 2070
AsuII TTCGAA 1 cut(s) 1442
AvaII GGWCC 3 cut(s) 1073, 2267, 2507
BaeGI GKGCMC 2 cut(s) 651, 2317
BaeI ACNNNNGTAYC 2 cut(s) 1929, 1962
BalI TGGCCA 3 cut(s) 1392, 1623, 1812
BanI GGYRCC 2 cut(s) 279, 965
BanII GRGCYC 1 cut(s) 2642
BarI GAAGNNNNNNTAC 4 cut(s) 225, 257, 980, 1012
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 3 cut(s) 1878, 2317, 2642
BbvI GCAGC 5 cut(s) 445, 504, 667, 1226, 1453
BccI CCATC 9 cut(s) 25, 88, 256, 701, 824, 929, 1061, 1613, 2431
BceAI ACGGC 2 cut(s) 267, 378
BcgI CGANNNNNNTGC 2 cut(s) 66, 100
BciT130I CCWGG 6 cut(s) 230, 277, 835, 1899, 1935, 1985
BciVI GTATCC 1 cut(s) 1242
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 1 cut(s) 2070
BcoDI GTCTC 4 cut(s) 866, 1361, 2279, 2555
BcuI ACTAGT 1 cut(s) 244
BfmI CTRYAG 6 cut(s) 192, 363, 1212, 1324, 1506, 2627
BfoI RGCGCY 2 cut(s) 969, 2413
BfuAI ACCTGC 1 cut(s) 2038
BfuI GTATCC 1 cut(s) 1242
BglII AGATCT 1 cut(s) 1951
BisI GCNGC 7 cut(s) 459, 493, 656, 659, 1056, 1215, 1467
BlsI GCNGC 7 cut(s) 460, 494, 657, 660, 1057, 1216, 1468
Bme1390I CCNGG 7 cut(s) 230, 277, 835, 1899, 1935, 1985, 2070
Bme18I GGWCC 3 cut(s) 1073, 2267, 2507
BmgBI CACGTC 1 cut(s) 1476
BmgT120I GGNCC 4 cut(s) 1073, 1652, 2267, 2507
BmiI GGNNCC 8 cut(s) 281, 483, 712, 967, 1075, 1896, 2269, 2508
BmrFI CCNGG 7 cut(s) 230, 277, 835, 1899, 1935, 1985, 2070
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 6 cut(s) 481, 1132, 2367, 2568, 2579, 2624
Bpu10I CCTNAGC 3 cut(s) 1677, 1968, 2148
Bpu14I TTCGAA 1 cut(s) 1442
BpuEI CTTGAG 1 cut(s) 805
BpuMI CCSGG 1 cut(s) 2070
BsaAI YACGTR 1 cut(s) 614
BsaHI GRCGYC 1 cut(s) 966
BsaJI CCNNGG 4 cut(s) 1528, 2069, 2433, 2502
BsaWI WCCGGW 1 cut(s) 2213
BsaXI ACNNNNNCTCC 6 cut(s) 479, 509, 2276, 2306, 2566, 2596
Bsc4I CCNNNNNNNGG 6 cut(s) 645, 1399, 1556, 1584, 2504, 2632
Bse1I ACTGG 5 cut(s) 498, 1102, 1141, 1228, 2607
Bse3DI GCAATG 1 cut(s) 1608
BseAI TCCGGA 1 cut(s) 2213
BseBI CCWGG 6 cut(s) 230, 277, 835, 1899, 1935, 1985
BseDI CCNNGG 4 cut(s) 1528, 2069, 2433, 2502
BseGI GGATG 4 cut(s) 70, 267, 1354, 1593
BseLI CCNNNNNNNGG 6 cut(s) 645, 1399, 1556, 1584, 2504, 2632
BseMI GCAATG 1 cut(s) 1608
BseMII CTCAG 7 cut(s) 1179, 1356, 1401, 1982, 2010, 2139, 2303
BseNI ACTGG 5 cut(s) 498, 1102, 1141, 1228, 2607
BseRI GAGGAG 4 cut(s) 2173, 2176, 2179, 2186
BseSI GKGCMC 2 cut(s) 651, 2317
BseXI GCAGC 5 cut(s) 445, 504, 667, 1226, 1453
BshNI GGYRCC 2 cut(s) 279, 965
BsiHKAI GWGCWC 3 cut(s) 1878, 2317, 2642
BsiSI CCGG 2 cut(s) 2069, 2214
BslFI GGGAC 3 cut(s) 1557, 1870, 2520
BslI CCNNNNNNNGG 6 cut(s) 645, 1399, 1556, 1584, 2504, 2632
BsmAI GTCTC 4 cut(s) 866, 1361, 2279, 2555
BsmFI GGGAC 3 cut(s) 1557, 1870, 2520
BsmI GAATGC 1 cut(s) 2129
Bsp119I TTCGAA 1 cut(s) 1442
Bsp1286I GDGCHC 4 cut(s) 651, 1878, 2317, 2642
Bsp13I TCCGGA 1 cut(s) 2213
Bsp1407I TGTACA 1 cut(s) 2488
Bsp143I GATC 5 cut(s) 106, 187, 1562, 1951, 2065
BspACI CCGC 8 cut(s) 490, 658, 939, 1043, 1055, 2152, 2190, 2462
BspCNI CTCAG 7 cut(s) 1180, 1357, 1402, 1981, 2011, 2140, 2302
BspEI TCCGGA 1 cut(s) 2213
BspHI TCATGA 3 cut(s) 184, 882, 1300
BspLI GGNNCC 8 cut(s) 281, 483, 712, 967, 1075, 1896, 2269, 2508
BspMAI CTGCAG 2 cut(s) 196, 1216
BspMI ACCTGC 1 cut(s) 2038
BspPI GGATC 3 cut(s) 182, 1557, 2060
BspT104I TTCGAA 1 cut(s) 1442
BspT107I GGYRCC 2 cut(s) 279, 965
BsrBI CCGCTC 2 cut(s) 2152, 2192
BsrDI GCAATG 1 cut(s) 1608
BsrGI TGTACA 1 cut(s) 2488
BsrI ACTGG 5 cut(s) 498, 1102, 1141, 1228, 2607
BssECI CCNNGG 4 cut(s) 1528, 2069, 2433, 2502
BssMI GATC 5 cut(s) 106, 187, 1562, 1951, 2065
BssNAI GTATAC 1 cut(s) 1748
BssNI GRCGYC 1 cut(s) 966
BssT1I CCWWGG 3 cut(s) 1528, 2433, 2502
Bst1107I GTATAC 1 cut(s) 1748
Bst2UI CCWGG 6 cut(s) 230, 277, 835, 1899, 1935, 1985
Bst4CI ACNGT 7 cut(s) 239, 607, 898, 1328, 1769, 1783, 2093
Bst6I CTCTTC 6 cut(s) 375, 833, 845, 864, 983, 2150
BstACI GRCGYC 1 cut(s) 966
BstAPI GCANNNNNTGC 1 cut(s) 1184
BstAUI TGTACA 1 cut(s) 2488
BstBAI YACGTR 1 cut(s) 614
BstBI TTCGAA 1 cut(s) 1442
BstC8I GCNNGC 5 cut(s) 174, 726, 1981, 2009, 2499
BstEII GGTNACC 1 cut(s) 1999
BstENI CCTNNNNNAGG 1 cut(s) 2630
BstF5I GGATG 4 cut(s) 70, 267, 1354, 1593
BstH2I RGCGCY 2 cut(s) 969, 2413
BstHHI GCGC 2 cut(s) 968, 2412
BstKTI GATC 5 cut(s) 109, 190, 1565, 1954, 2068
BstMAI GTCTC 4 cut(s) 866, 1361, 2279, 2555
BstMBI GATC 5 cut(s) 106, 187, 1562, 1951, 2065
BstMWI GCNNNNNNNGC 5 cut(s) 655, 664, 1184, 1715, 2351
BstNI CCWGG 6 cut(s) 230, 277, 835, 1899, 1935, 1985
BstNSI RCATGY 1 cut(s) 1983
BstPI GGTNACC 1 cut(s) 1999
BstSCI CCNGG 7 cut(s) 228, 275, 833, 1897, 1933, 1983, 2068
BstSFI CTRYAG 6 cut(s) 192, 363, 1212, 1324, 1506, 2627
BstSLI GKGCMC 2 cut(s) 651, 2317
BstV1I GCAGC 5 cut(s) 445, 504, 667, 1226, 1453
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 3 cut(s) 1562, 1951, 2065
BstYI RGATCY 3 cut(s) 1562, 1951, 2065
BstZ17I GTATAC 1 cut(s) 1748
BsuI GTATCC 1 cut(s) 1242
BtrI CACGTC 1 cut(s) 1476
BtsCI GGATG 4 cut(s) 70, 267, 1354, 1593
BtsI GCAGTG 2 cut(s) 805, 2222
BtsIMutI CAGTG 7 cut(s) 505, 805, 903, 1095, 1774, 2222, 2433
BveI ACCTGC 1 cut(s) 2038
Cac8I GCNNGC 5 cut(s) 174, 726, 1981, 2009, 2499
CciI TCATGA 3 cut(s) 184, 882, 1300
CfoI GCGC 2 cut(s) 968, 2412
Cfr13I GGNCC 4 cut(s) 1073, 1652, 2267, 2507
CseI GACGC 1 cut(s) 2199
CsiI ACCWGGT 1 cut(s) 1933
Csp6I GTAC 7 cut(s) 208, 593, 636, 997, 1631, 1938, 2489
CviQI GTAC 7 cut(s) 208, 593, 636, 997, 1631, 1938, 2489
DinI GGCGCC 1 cut(s) 967
DpnI GATC 5 cut(s) 108, 189, 1564, 1953, 2067
DpnII GATC 5 cut(s) 106, 187, 1562, 1951, 2065
DraI TTTAAA 1 cut(s) 1090
DraIII CACNNNGTG 1 cut(s) 168
DrdI GACNNNNNNGTC 1 cut(s) 2209
DseDI GACNNNNNNGTC 1 cut(s) 2209
EaeI YGGCCR 3 cut(s) 1390, 1621, 1810
Eam1104I CTCTTC 6 cut(s) 375, 833, 845, 864, 983, 2150
EarI CTCTTC 6 cut(s) 375, 833, 845, 864, 983, 2150
EciI GGCGGA 1 cut(s) 2451
Ecl136II GAGCTC 1 cut(s) 2640
Eco130I CCWWGG 3 cut(s) 1528, 2433, 2502
Eco147I AGGCCT 2 cut(s) 914, 2622
Eco24I GRGCYC 1 cut(s) 2642
Eco32I GATATC 2 cut(s) 888, 1290
Eco47I GGWCC 3 cut(s) 1073, 2267, 2507
Eco47III AGCGCT 1 cut(s) 2411
Eco53kI GAGCTC 1 cut(s) 2640
Eco57I CTGAAG 8 cut(s) 317, 659, 740, 1626, 1845, 1854, 2522, 2550
Eco91I GGTNACC 1 cut(s) 1999
EcoICRI GAGCTC 1 cut(s) 2640
EcoNI CCTNNNNNAGG 1 cut(s) 2630
EcoO109I RGGNCCY 1 cut(s) 2507
EcoO65I GGTNACC 1 cut(s) 1999
EcoRI GAATTC 3 cut(s) 180, 1202, 2217
EcoRII CCWGG 6 cut(s) 228, 275, 833, 1897, 1933, 1983
EcoRV GATATC 2 cut(s) 888, 1290
EcoT14I CCWWGG 3 cut(s) 1528, 2433, 2502
EcoT22I ATGCAT 3 cut(s) 202, 669, 1180
EcoT38I GRGCYC 1 cut(s) 2642
EgeI GGCGCC 1 cut(s) 967
EheI GGCGCC 1 cut(s) 967
ErhI CCWWGG 3 cut(s) 1528, 2433, 2502
FaqI GGGAC 3 cut(s) 1557, 1870, 2520
FauI CCCGC 1 cut(s) 932
FbaI TGATCA 1 cut(s) 106
FblI GTMKAC 2 cut(s) 241, 1747
Fnu4HI GCNGC 7 cut(s) 459, 493, 656, 659, 1056, 1215, 1467
FokI GGATG 4 cut(s) 77, 274, 1361, 1600
FriOI GRGCYC 1 cut(s) 2642
Fsp4HI GCNGC 7 cut(s) 459, 493, 656, 659, 1056, 1215, 1467
GlaI GCGC 2 cut(s) 967, 2411
GluI GCNGC 7 cut(s) 459, 493, 656, 659, 1056, 1215, 1467
GsuI CTGGAG 6 cut(s) 481, 1132, 2367, 2568, 2579, 2624
HaeII RGCGCY 2 cut(s) 969, 2413
HapII CCGG 2 cut(s) 2069, 2214
HgaI GACGC 1 cut(s) 2199
HhaI GCGC 2 cut(s) 968, 2412
Hin1I GRCGYC 1 cut(s) 966
Hin6I GCGC 2 cut(s) 966, 2410
HinP1I GCGC 2 cut(s) 966, 2410
HindIII AAGCTT 1 cut(s) 1480
HpaII CCGG 2 cut(s) 2069, 2214
Hpy166II GTNNAC 9 cut(s) 242, 503, 593, 1073, 1134, 1748, 2027, 2144, 2315
Hpy8I GTNNAC 9 cut(s) 242, 503, 593, 1073, 1134, 1748, 2027, 2144, 2315
Hpy99I CGWCG 1 cut(s) 288
HpyCH4III ACNGT 7 cut(s) 239, 607, 898, 1328, 1769, 1783, 2093
HpyCH4IV ACGT 2 cut(s) 613, 1475
HpyF10VI GCNNNNNNNGC 5 cut(s) 655, 664, 1184, 1715, 2351
HpySE526I ACGT 2 cut(s) 613, 1475
Hsp92I GRCGYC 1 cut(s) 966
HspAI GCGC 2 cut(s) 966, 2410
KasI GGCGCC 1 cut(s) 965
Kpn2I TCCGGA 1 cut(s) 2213
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 5 cut(s) 106, 187, 1562, 1951, 2065
LmnI GCTCC 5 cut(s) 487, 500, 1706, 1900, 2645
Lsp1109I GCAGC 5 cut(s) 445, 504, 667, 1226, 1453
MabI ACCWGGT 1 cut(s) 1933
MaeII ACGT 2 cut(s) 613, 1475
MaeIII GTNAC 9 cut(s) 224, 520, 607, 701, 1145, 1763, 1829, 1999, 2479
MalI GATC 5 cut(s) 108, 189, 1564, 1953, 2067
MbiI CCGCTC 2 cut(s) 2152, 2192
MboI GATC 5 cut(s) 106, 187, 1562, 1951, 2065
MfeI CAATTG 2 cut(s) 1062, 1740
MflI RGATCY 3 cut(s) 1562, 1951, 2065
MhlI GDGCHC 4 cut(s) 651, 1878, 2317, 2642
MlsI TGGCCA 3 cut(s) 1392, 1623, 1812
MluNI TGGCCA 3 cut(s) 1392, 1623, 1812
Mly113I GGCGCC 1 cut(s) 966
MlyI GAGTC 4 cut(s) 980, 1982, 2281, 2476
MmeI TCCRAC 3 cut(s) 25, 1359, 1911
Mox20I TGGCCA 3 cut(s) 1392, 1623, 1812
Mph1103I ATGCAT 3 cut(s) 202, 669, 1180
MroI TCCGGA 1 cut(s) 2213
MroXI GAANNNNTTC 1 cut(s) 302
MscI TGGCCA 3 cut(s) 1392, 1623, 1812
MseI TTAA 9 cut(s) 51, 147, 357, 1089, 1791, 2243, 2297, 2415, 2665
MslI CAYNNNNRTG 1 cut(s) 1019
Msp20I TGGCCA 3 cut(s) 1392, 1623, 1812
MspA1I CMGCKG 4 cut(s) 658, 1646, 2018, 2648
MspI CCGG 2 cut(s) 2069, 2214
MspR9I CCNGG 7 cut(s) 230, 277, 835, 1899, 1935, 1985, 2070
MunI CAATTG 2 cut(s) 1062, 1740
Mva1269I GAATGC 1 cut(s) 2129
MvaI CCWGG 6 cut(s) 230, 277, 835, 1899, 1935, 1985
MwoI GCNNNNNNNGC 5 cut(s) 655, 664, 1184, 1715, 2351
NarI GGCGCC 1 cut(s) 966
NciI CCSGG 1 cut(s) 2070
NdeII GATC 5 cut(s) 106, 187, 1562, 1951, 2065
NlaIV GGNNCC 8 cut(s) 281, 483, 712, 967, 1075, 1896, 2269, 2508
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 4 cut(s) 224, 701, 1999, 2479
NsiI ATGCAT 3 cut(s) 202, 669, 1180
NspI RCATGY 1 cut(s) 1983
NspV TTCGAA 1 cut(s) 1442
PaeI GCATGC 1 cut(s) 1983
PagI TCATGA 3 cut(s) 184, 882, 1300
PceI AGGCCT 2 cut(s) 914, 2622
PctI GAATGC 1 cut(s) 2129
PdmI GAANNNNTTC 1 cut(s) 302
PfoI TCCNGGA 1 cut(s) 833
PkrI GCNGC 7 cut(s) 460, 494, 657, 660, 1057, 1216, 1468
PleI GAGTC 4 cut(s) 979, 1982, 2281, 2476
PluTI GGCGCC 1 cut(s) 969
PpsI GAGTC 4 cut(s) 979, 1982, 2281, 2476
Ppu21I YACGTR 1 cut(s) 614
PpuMI RGGWCCY 1 cut(s) 2507
Psp124BI GAGCTC 1 cut(s) 2642
Psp5II RGGWCCY 1 cut(s) 2507
Psp6I CCWGG 6 cut(s) 228, 275, 833, 1897, 1933, 1983
PspEI GGTNACC 1 cut(s) 1999
PspGI CCWGG 6 cut(s) 228, 275, 833, 1897, 1933, 1983
PspN4I GGNNCC 8 cut(s) 281, 483, 712, 967, 1075, 1896, 2269, 2508
PspPI GGNCC 4 cut(s) 1073, 1652, 2267, 2507
PspPPI RGGWCCY 1 cut(s) 2507
PstI CTGCAG 2 cut(s) 196, 1216
PsuI RGATCY 3 cut(s) 1562, 1951, 2065
PvuII CAGCTG 3 cut(s) 1646, 2018, 2648
RsaI GTAC 7 cut(s) 209, 594, 637, 998, 1632, 1939, 2490
RsaNI GTAC 7 cut(s) 208, 593, 636, 997, 1631, 1938, 2489
RseI CAYNNNNRTG 1 cut(s) 1019
SacI GAGCTC 1 cut(s) 2642
SaqAI TTAA 9 cut(s) 51, 147, 357, 1089, 1791, 2243, 2297, 2415, 2665
SatI GCNGC 7 cut(s) 459, 493, 656, 659, 1056, 1215, 1467
Sau3AI GATC 5 cut(s) 106, 187, 1562, 1951, 2065
Sau96I GGNCC 4 cut(s) 1073, 1652, 2267, 2507
SchI GAGTC 4 cut(s) 980, 1982, 2281, 2476
ScrFI CCNGG 7 cut(s) 230, 277, 835, 1899, 1935, 1985, 2070
SduI GDGCHC 4 cut(s) 651, 1878, 2317, 2642
SexAI ACCWGGT 1 cut(s) 1933
SfcI CTRYAG 6 cut(s) 192, 363, 1212, 1324, 1506, 2627
SfoI GGCGCC 1 cut(s) 967
SfuI TTCGAA 1 cut(s) 1442
SinI GGWCC 3 cut(s) 1073, 2267, 2507
SmiMI CAYNNNNRTG 1 cut(s) 1019
SmlI CTYRAG 1 cut(s) 820
SmoI CTYRAG 1 cut(s) 820
SpeI ACTAGT 1 cut(s) 244
SphI GCATGC 1 cut(s) 1983
SseBI AGGCCT 2 cut(s) 914, 2622
SsiI CCGC 8 cut(s) 490, 658, 939, 1043, 1055, 2152, 2190, 2462
SspDI GGCGCC 1 cut(s) 965
SstI GAGCTC 1 cut(s) 2642
StuI AGGCCT 2 cut(s) 914, 2622
StyD4I CCNGG 7 cut(s) 228, 275, 833, 1897, 1933, 1983, 2068
StyI CCWWGG 3 cut(s) 1528, 2433, 2502
TaaI ACNGT 7 cut(s) 239, 607, 898, 1328, 1769, 1783, 2093
TaiI ACGT 2 cut(s) 616, 1478
TaqI TCGA 6 cut(s) 86, 286, 318, 439, 619, 1442
TatI WGTACW 2 cut(s) 592, 2488
TauI GCSGC 2 cut(s) 661, 1058
Tru1I TTAA 9 cut(s) 51, 147, 357, 1089, 1791, 2243, 2297, 2415, 2665
Tru9I TTAA 9 cut(s) 51, 147, 357, 1089, 1791, 2243, 2297, 2415, 2665
TscAI CASTG 7 cut(s) 505, 805, 903, 1102, 1774, 2229, 2433
TseFI GTSAC 4 cut(s) 224, 701, 1999, 2479
TseI GCWGC 5 cut(s) 458, 492, 655, 1214, 1466
Tsp45I GTSAC 4 cut(s) 224, 701, 1999, 2479
TspGWI ACGGA 2 cut(s) 225, 1874
TspRI CASTG 7 cut(s) 505, 805, 903, 1102, 1774, 2229, 2433
VneI GTGCAC 1 cut(s) 2313
VpaK11BI GGWCC 3 cut(s) 1073, 2267, 2507
XagI CCTNNNNNAGG 1 cut(s) 2630
XapI RAATTY 7 cut(s) 11, 180, 348, 512, 1084, 1202, 2217
XbaI TCTAGA 2 cut(s) 974, 1450
XceI RCATGY 1 cut(s) 1983
XmiI GTMKAC 2 cut(s) 241, 1747
XmnI GAANNNNTTC 1 cut(s) 302
Zsp2I ATGCAT 3 cut(s) 202, 669, 1180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.