Rmu_sc0002224.1_g000002

Serine threonine-protein kinase ATM-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002224.1
OG0001132
Physical Location & Seq
Forward (+)
8244 .. 11405
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002224.1_g000002.1.cds

Sequence Viewer

Length: 3162 bp
atggagactcccaaaaccccagaaaccctagaggctgctgggttcttagactggaatgaaagctgtcctgggttagaagagtctttttccaacattttcgaaagtaatggaagaagagttgattttggtcataatgatgttgggcttgggactatggaagtggcaactcaagtggtgcaacctgaggagacaatgttagatggtactaaaggaggagttttggaattatgtgtgcatgaaacaatgtctggtgtcggaaacagttgcgtgaatgattttgggttcggcactgtggaagtggcaactcaaatggcggaagcggaggaaacaatattagatggttctaaaagagaagatttggaattgggtgctgatgcagcgaattctggcgtacagaagagttgcgggaatgattttgggttcagcaccgtggaagtcgcaaatcaaatggtggaaccggaggaaacaatattagatggtactaaaagagaagatttggaattggctgttgatacagcggtttctggtgtacagaagagttgcgtgaatggggttggggtggaagaggtttatatcgttaatactcatgttgatgtgggagatgaggctcagatggtatccaaattgaaactgttgcaatcagaaaaggaaaatgaccatcagaatgtttctgtggagttaaagtctgtggatgatgatcgtacaaatgaagacaaagcattggggctgagtacggatggtagtcagagagatgatgatggagttgagaagatgtttgaaggtgttaaagtagagaagatggttgaagattttagagttgagaagatggttgaagatggtggagttgagaaaatggttgaagatggtgaagttgagaagatggttggatatgatggagtgcagaagatagtggataatgatcatatgaatgaagacaaagcttcaggattgagtatgggtggtggtcagagagaagatgatggagttgagaaaatgtctgaagatggtggtgatgagaagatgtctgaagatgatggagttgagaaaatgtttaaagatggtggagttgagaaaatgtttaaagatggtggagttgagaagacagttgaagatgatggagtagagaaggcaaaggacgacgatggtatgaatgaggccaaagcattggcatcgagtattggtggtagtcaaagagaagatgatgttgggaagatccttgtggacgatgctatcactgaagacaaagcattgggatcagatgggattgaatcggctgttgatttaactggcaacaagcaagaagtttctggtgatggtatttcgctgtttgtggattttactggccctccaccaggatttattgttgatatgggtcctgggatcacaagcaagggcaatgcacaagaatttggagatgatgaactggagaagggtgaagatgatcaagattatgatttttctgtgggtgatattgtatgggttaaaacaaaaataaagacatggtggcctggtaggattcatgatcctgtagatgcgtcaaagtacgggatggttagtgaccaagaaggctgtctactagttgggtactttgggatgggtcatgttgcttggtgtcgtcgataccaactaaagcccttccctcagtactttgagcagatttcagggcaaagcaaggctagaatttttgttggagctgtagagaaagctcttgaagagtttggtggccgtgtaaaattgaatatgacttgtgcctgtattttgaaagcaaatcgactgtcagttgatggtccagcatctaaggaaggagttcctgaccgcaactctagtgaacttggtgaattttcagttactcattttgattctgcaaagttccttgcacatctgaaaaatcttgctcaggttgtttccaaagttgacatacttgattatactgttacacttggtcgattatcagccttctatagctccacagggcacagccagctgccaatgcatctacttcgggaaggaaatgatgctgaaagtggtgccgacggaaccttgctgatgcaaacagatgaaactatcttacatcaagaaaagaatgacaagaatgaagcttttgcaaagctttttggtgggggcagtgctgataaaacttccatctcaagttcaaagtccaggaagagaaagatgaagagggattctgaaattgaagagactagcctagtgatatccccgacagtgaaagaaagcaatgcttccagtctaggaaatggtgatggcggaaatgaaggaatgattgaaataggcgctgagtcgagagagaggaagaagagtaggtacttgtcttacccatatgtaaactgggggcagaaaggattgtctgcggaaggaatggcagcaactactgatggtggaccaccttcaaattttaaaagcactggtgagaaattctggaggaaatggcataggaggtttactggtgtgaataacacatctggtaattcaaatgtgaaaaatacatcttctgctgagttgctttctgaattctgctctgcagccatcggctgccagtatccgattgaaaataaagcatttgattcagttgcttggttcatctctaacttcaggatatcagtatttcatgacgagcccatttgtgaaacctacagtaagaacatggctggtcaggatgaggataaagatgccgaaccttgcctgttggaaaatggtggtcagaatgaggctaaatctgagccaaagaaaagaagtaaaaaggcagtttcgaagcaatcagagggtgaagacgctgccaacacgtcaagcttagttcaaagccctgcaactgctgtacagggtatgaatggaaaccttggcaagaaaaggggcaacccttttggcacaaaccttgtatcttacaggcgctttaatcttccatcagtgtccaaggttttagccacaagcctagcctctccgcctacaaagagattgctgagtcctgtacaatctcctggcaagggaccttgccttgacgtcataaggcagaatcttcagatgatgacatcaatgctggagaagtcgggtgatactctttctccagagatgagaaccaaactggagtgtgaaataaaaggcctcctacagaaggtgagctccacagctggttcttcctctgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

1053

Amino Acids

113.95

Weight (kDa)

4.66

Isoelectric Point (pI)

40.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 3018
AccB1I GGYRCC 1 cut(s) 2027
AccI GTMKAC 1 cut(s) 1573
AciI CCGC 8 cut(s) 314, 320, 405, 518, 1816, 2265, 2369, 2957
AclWI GGATC 4 cut(s) 1207, 1261, 1388, 1517
AcoI YGGCCR 1 cut(s) 1723
AcsI RAATTY 7 cut(s) 382, 1406, 1680, 1838, 2410, 2432, 2528
AcuI CTGAAG 6 cut(s) 927, 1020, 1047, 1257, 2593, 3017
AcyI GRCGYC 1 cut(s) 3015
AfiI CCNNNNNNNGG 3 cut(s) 1352, 2999, 3127
AflIII ACRYGT 1 cut(s) 2799
AhlI ACTAGT 1 cut(s) 1576
AjiI CACGTC 1 cut(s) 2802
AjnI CCWGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
AjuI GAANNNNNNNTTGG 2 cut(s) 1188, 1220
Alw21I GWGCWC 1 cut(s) 3137
Alw26I GTCTC 2 cut(s) 182, 2192
AlwI GGATC 4 cut(s) 1207, 1261, 1388, 1517
AoxI GGCC 5 cut(s) 1155, 1342, 1505, 1723, 3115
ApeKI GCWGC 7 cut(s) 35, 377, 1984, 2381, 2540, 2550, 2792
ApoI RAATTY 7 cut(s) 382, 1406, 1680, 1838, 2410, 2432, 2528
ArsI GACNNNNNNTTYG 2 cut(s) 1760, 1792
Asp700I GAANNNNTTC 1 cut(s) 1806
AspLEI GCGC 2 cut(s) 2294, 2907
AspS9I GGNCC 5 cut(s) 1343, 1373, 1787, 2399, 3002
AsuII TTCGAA 2 cut(s) 99, 2768
AvaII GGWCC 4 cut(s) 1373, 1787, 2399, 3002
AxyI CCTNAGG 1 cut(s) 183
BaeGI GKGCMC 1 cut(s) 1977
BaeI ACNNNNGTAYC 2 cut(s) 504, 537
BanI GGYRCC 1 cut(s) 2027
BanII GRGCYC 2 cut(s) 2637, 3137
BarI GAAGNNNNNNTAC 4 cut(s) 1557, 1589, 2306, 2338
BbsI GAAGAC 5 cut(s) 717, 939, 1106, 1245, 2793
Bbv12I GWGCWC 1 cut(s) 3137
BbvI GCAGC 7 cut(s) 22, 389, 1971, 2393, 2537, 2552, 2779
BceAI ACGGC 1 cut(s) 1710
BcgI CGANNNNNNTGC 4 cut(s) 1152, 1186, 1982, 2016
BciT130I CCWGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
BciVI GTATCC 2 cut(s) 628, 2568
BclI TGATCA 2 cut(s) 919, 1441
BcoDI GTCTC 2 cut(s) 182, 2192
BcuI ACTAGT 1 cut(s) 1576
BfaI CTAG 8 cut(s) 29, 1577, 1677, 1824, 2202, 2207, 2249, 2948
BfmI CTRYAG 6 cut(s) 1527, 1695, 1960, 2538, 2650, 3122
BfoI RGCGCY 2 cut(s) 2295, 2908
BfuI GTATCC 2 cut(s) 628, 2568
BisI GCNGC 7 cut(s) 36, 378, 1985, 2382, 2541, 2551, 2793
BlsI GCNGC 7 cut(s) 37, 379, 1986, 2383, 2542, 2552, 2794
BmcAI AGTACT 1 cut(s) 1646
Bme1390I CCNGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
Bme18I GGWCC 4 cut(s) 1373, 1787, 2399, 3002
BmgBI CACGTC 1 cut(s) 2802
BmgT120I GGNCC 5 cut(s) 1343, 1373, 1787, 2399, 3002
BmiI GGNNCC 5 cut(s) 456, 1374, 2029, 2038, 3003
BmrFI CCNGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
BmrI ACTGGG 1 cut(s) 2356
BmsI GCATC 9 cut(s) 364, 1178, 1216, 1522, 1802, 2002, 2005, 2037, 2677
BmuI ACTGGG 1 cut(s) 2356
BpiI GAAGAC 5 cut(s) 717, 939, 1106, 1245, 2793
BpmI CTGGAG 5 cut(s) 1445, 2458, 3063, 3074, 3119
Bpu10I CCTNAGC 1 cut(s) 1896
Bpu14I TTCGAA 2 cut(s) 99, 2768
BpuEI CTTGAG 2 cut(s) 153, 2131
BsaBI GATNNNNATC 2 cut(s) 696, 918
BsaHI GRCGYC 1 cut(s) 3015
BsaJI CCNNGG 5 cut(s) 68, 429, 1376, 2854, 2928
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 8 cut(s) 179, 209, 668, 698, 1330, 1360, 3061, 3091
Bsc4I CCNNNNNNNGG 3 cut(s) 1352, 2999, 3127
Bse21I CCTNAGG 1 cut(s) 183
Bse3DI GCAATG 2 cut(s) 1402, 2242
Bse8I GATNNNNATC 2 cut(s) 696, 918
BseBI CCWGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
BseDI CCNNGG 5 cut(s) 68, 429, 1376, 2854, 2928
BseGI GGATG 5 cut(s) 697, 742, 1554, 1599, 2680
BseJI GATNNNNATC 2 cut(s) 696, 918
BseLI CCNNNNNNNGG 3 cut(s) 1352, 2999, 3127
BseMI GCAATG 2 cut(s) 1402, 2242
BseMII CTCAG 9 cut(s) 174, 623, 719, 1655, 1910, 2286, 2505, 2727, 2966
BseRI GAGGAG 2 cut(s) 200, 228
BseSI GKGCMC 1 cut(s) 1977
BseXI GCAGC 7 cut(s) 22, 389, 1971, 2393, 2537, 2552, 2779
BseYI CCCAGC 1 cut(s) 38
BsgI GTGCAG 1 cut(s) 920
BshFI GGCC 5 cut(s) 1157, 1344, 1507, 1725, 3117
BshNI GGYRCC 1 cut(s) 2027
BsiHKAI GWGCWC 1 cut(s) 3137
BsiSI CCGG 1 cut(s) 458
BslFI GGGAC 2 cut(s) 163, 3015
BslI CCNNNNNNNGG 3 cut(s) 1352, 2999, 3127
BsmAI GTCTC 2 cut(s) 182, 2192
BsmFI GGGAC 2 cut(s) 163, 3015
BsnI GGCC 5 cut(s) 1157, 1344, 1507, 1725, 3117
Bsp119I TTCGAA 2 cut(s) 99, 2768
Bsp1286I GDGCHC 3 cut(s) 1977, 2637, 3137
Bsp1407I TGTACA 3 cut(s) 529, 2833, 2983
Bsp143I GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
BspACI CCGC 8 cut(s) 314, 320, 405, 518, 1816, 2265, 2369, 2957
BspANI GGCC 5 cut(s) 1157, 1344, 1507, 1725, 3117
BspCNI CTCAG 9 cut(s) 175, 622, 720, 1654, 1909, 2287, 2506, 2728, 2967
BspHI TCATGA 2 cut(s) 1519, 2626
BspLI GGNNCC 5 cut(s) 456, 1374, 2029, 2038, 3003
BspMAI CTGCAG 1 cut(s) 2542
BspPI GGATC 4 cut(s) 1207, 1261, 1388, 1517
BspT104I TTCGAA 2 cut(s) 99, 2768
BspT107I GGYRCC 1 cut(s) 2027
BsrDI GCAATG 2 cut(s) 1402, 2242
BsrGI TGTACA 3 cut(s) 529, 2833, 2983
BssECI CCNNGG 5 cut(s) 68, 429, 1376, 2854, 2928
BssMI GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
BssNI GRCGYC 1 cut(s) 3015
BssT1I CCWWGG 2 cut(s) 2854, 2928
Bst2UI CCWGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
Bst4CI ACNGT 9 cut(s) 263, 292, 430, 633, 1105, 1776, 1933, 2224, 2654
BstACI GRCGYC 1 cut(s) 3015
BstAUI TGTACA 3 cut(s) 529, 2833, 2983
BstBI TTCGAA 2 cut(s) 99, 2768
BstC8I GCNNGC 1 cut(s) 1982
BstDSI CCRYGG 1 cut(s) 429
BstENI CCTNNNNNAGG 2 cut(s) 1350, 3125
BstF5I GGATG 5 cut(s) 697, 742, 1554, 1599, 2680
BstH2I RGCGCY 2 cut(s) 2295, 2908
BstHHI GCGC 2 cut(s) 2294, 2907
BstKTI GATC 7 cut(s) 700, 922, 1215, 1256, 1383, 1444, 1525
BstMAI GTCTC 2 cut(s) 182, 2192
BstMBI GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
BstMWI GCNNNNNNNGC 3 cut(s) 377, 1981, 1990
BstNI CCWGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
BstSCI CCNGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
BstSFI CTRYAG 6 cut(s) 1527, 1695, 1960, 2538, 2650, 3122
BstSLI GKGCMC 1 cut(s) 1977
BstV1I GCAGC 7 cut(s) 22, 389, 1971, 2393, 2537, 2552, 2779
BstV2I GAAGAC 5 cut(s) 717, 939, 1106, 1245, 2793
BstX2I RGATCY 1 cut(s) 1212
BstXI CCANNNNNNTGG 1 cut(s) 1165
BstYI RGATCY 1 cut(s) 1212
Bsu36I CCTNAGG 1 cut(s) 183
BsuI GTATCC 2 cut(s) 628, 2568
BsuRI GGCC 5 cut(s) 1157, 1344, 1507, 1725, 3117
BtgI CCRYGG 1 cut(s) 429
BtrI CACGTC 1 cut(s) 2802
BtsCI GGATG 5 cut(s) 697, 742, 1554, 1599, 2680
BtsI GCAGTG 1 cut(s) 2131
BtsIMutI CAGTG 6 cut(s) 288, 1233, 2131, 2229, 2421, 2928
Cac8I GCNNGC 1 cut(s) 1982
CciI TCATGA 2 cut(s) 1519, 2626
CfoI GCGC 2 cut(s) 2294, 2907
Cfr13I GGNCC 5 cut(s) 1343, 1373, 1787, 2399, 3002
CseI GACGC 2 cut(s) 1524, 2798
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviAII CATG 7 cut(s) 236, 587, 1500, 1520, 1601, 2627, 2662
DpnI GATC 7 cut(s) 699, 921, 1214, 1255, 1382, 1443, 1524
DpnII GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
DraI TTTAAA 3 cut(s) 1054, 1081, 2416
EaeI YGGCCR 1 cut(s) 1723
EciI GGCGGA 3 cut(s) 329, 2280, 2946
Ecl136II GAGCTC 1 cut(s) 3135
Eco130I CCWWGG 2 cut(s) 2854, 2928
Eco147I AGGCCT 1 cut(s) 3117
Eco24I GRGCYC 2 cut(s) 2637, 3137
Eco32I GATATC 2 cut(s) 2214, 2616
Eco47I GGWCC 4 cut(s) 1373, 1787, 2399, 3002
Eco53kI GAGCTC 1 cut(s) 3135
Eco57I CTGAAG 6 cut(s) 927, 1020, 1047, 1257, 2593, 3017
Eco81I CCTNAGG 1 cut(s) 183
EcoICRI GAGCTC 1 cut(s) 3135
EcoNI CCTNNNNNAGG 2 cut(s) 1350, 3125
EcoO109I RGGNCCY 2 cut(s) 1373, 3002
EcoRI GAATTC 2 cut(s) 382, 2528
EcoRII CCWGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
EcoRV GATATC 2 cut(s) 2214, 2616
EcoT14I CCWWGG 2 cut(s) 2854, 2928
EcoT22I ATGCAT 1 cut(s) 1995
EcoT38I GRGCYC 2 cut(s) 2637, 3137
ErhI CCWWGG 2 cut(s) 2854, 2928
FaeI CATG 7 cut(s) 239, 590, 1503, 1523, 1604, 2630, 2665
FalI AAGNNNNNCTT 2 cut(s) 2224, 2256
FaqI GGGAC 2 cut(s) 163, 3015
FatI CATG 7 cut(s) 235, 586, 1499, 1519, 1600, 2626, 2661
FauI CCCGC 1 cut(s) 398
FauNDI CATATG 2 cut(s) 924, 2338
FbaI TGATCA 2 cut(s) 919, 1441
FblI GTMKAC 1 cut(s) 1573
Fnu4HI GCNGC 7 cut(s) 36, 378, 1985, 2382, 2541, 2551, 2793
FokI GGATG 5 cut(s) 704, 749, 1561, 1606, 2687
FriOI GRGCYC 2 cut(s) 2637, 3137
Fsp4HI GCNGC 7 cut(s) 36, 378, 1985, 2382, 2541, 2551, 2793
FspBI CTAG 8 cut(s) 29, 1577, 1677, 1824, 2202, 2207, 2249, 2948
GlaI GCGC 2 cut(s) 2293, 2906
GluI GCNGC 7 cut(s) 36, 378, 1985, 2382, 2541, 2551, 2793
GsaI CCCAGC 1 cut(s) 42
GsuI CTGGAG 5 cut(s) 1445, 2458, 3063, 3074, 3119
HaeII RGCGCY 2 cut(s) 2295, 2908
HaeIII GGCC 5 cut(s) 1157, 1344, 1507, 1725, 3117
HapII CCGG 1 cut(s) 458
HgaI GACGC 2 cut(s) 1524, 2798
HhaI GCGC 2 cut(s) 2294, 2907
Hin1I GRCGYC 1 cut(s) 3015
Hin1II CATG 7 cut(s) 239, 590, 1503, 1523, 1604, 2630, 2665
Hin6I GCGC 2 cut(s) 2292, 2905
HinP1I GCGC 2 cut(s) 2292, 2905
HincII GTYRAC 1 cut(s) 1915
HindII GTYRAC 1 cut(s) 1915
HindIII AAGCTT 4 cut(s) 939, 2097, 2108, 2806
HpaII CCGG 1 cut(s) 458
Hpy166II GTNNAC 8 cut(s) 530, 1222, 1574, 1829, 1915, 2344, 2399, 2460
Hpy8I GTNNAC 8 cut(s) 530, 1222, 1574, 1829, 1915, 2344, 2399, 2460
Hpy99I CGWCG 3 cut(s) 1142, 1620, 2036
HpyCH4III ACNGT 9 cut(s) 263, 292, 430, 633, 1105, 1776, 1933, 2224, 2654
HpyCH4IV ACGT 2 cut(s) 2801, 3015
HpyF10VI GCNNNNNNNGC 3 cut(s) 377, 1981, 1990
HpySE526I ACGT 2 cut(s) 2801, 3015
Hsp92I GRCGYC 1 cut(s) 3015
Hsp92II CATG 7 cut(s) 239, 590, 1503, 1523, 1604, 2630, 2665
HspAI GCGC 2 cut(s) 2292, 2905
Ksp22I TGATCA 2 cut(s) 919, 1441
Kzo9I GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
LmnI GCTCC 3 cut(s) 1691, 1970, 3140
Lsp1109I GCAGC 7 cut(s) 22, 389, 1971, 2393, 2537, 2552, 2779
LweI GCATC 9 cut(s) 364, 1178, 1216, 1522, 1802, 2002, 2005, 2037, 2677
MaeI CTAG 8 cut(s) 29, 1577, 1677, 1824, 2202, 2207, 2249, 2948
MaeII ACGT 2 cut(s) 2801, 3015
MaeIII GTNAC 3 cut(s) 1556, 1846, 1933
MalI GATC 7 cut(s) 699, 921, 1214, 1255, 1382, 1443, 1524
MboI GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
MflI RGATCY 1 cut(s) 1212
MhlI GDGCHC 3 cut(s) 1977, 2637, 3137
MlyI GAGTC 3 cut(s) 89, 2306, 2986
MmeI TCCRAC 5 cut(s) 114, 235, 865, 1669, 2685
Mph1103I ATGCAT 1 cut(s) 1995
MroXI GAANNNNTTC 1 cut(s) 1806
MslI CAYNNNNRTG 4 cut(s) 135, 591, 663, 927
MspA1I CMGCKG 3 cut(s) 518, 1984, 3143
MspI CCGG 1 cut(s) 458
MspR9I CCNGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
MvaI CCWGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
MwoI GCNNNNNNNGC 3 cut(s) 377, 1981, 1990
NdeI CATATG 2 cut(s) 924, 2338
NdeII GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
NlaIII CATG 7 cut(s) 239, 590, 1503, 1523, 1604, 2630, 2665
NlaIV GGNNCC 5 cut(s) 456, 1374, 2029, 2038, 3003
NmuCI GTSAC 1 cut(s) 1556
NsiI ATGCAT 1 cut(s) 1995
NspV TTCGAA 2 cut(s) 99, 2768
PagI TCATGA 2 cut(s) 1519, 2626
PceI AGGCCT 1 cut(s) 3117
PdmI GAANNNNTTC 1 cut(s) 1806
PfeI GAWTC 6 cut(s) 1268, 1516, 1859, 2183, 2582, 3028
PfoI TCCNGGA 1 cut(s) 2159
PkrI GCNGC 7 cut(s) 37, 379, 1986, 2383, 2542, 2552, 2794
PleI GAGTC 3 cut(s) 88, 2305, 2985
PpsI GAGTC 3 cut(s) 88, 2305, 2985
PpuMI RGGWCCY 2 cut(s) 1373, 3002
Psp124BI GAGCTC 1 cut(s) 3137
Psp5II RGGWCCY 2 cut(s) 1373, 3002
Psp6I CCWGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
PspFI CCCAGC 1 cut(s) 38
PspGI CCWGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
PspN4I GGNNCC 5 cut(s) 456, 1374, 2029, 2038, 3003
PspPI GGNCC 5 cut(s) 1343, 1373, 1787, 2399, 3002
PspPPI RGGWCCY 2 cut(s) 1373, 3002
PstI CTGCAG 1 cut(s) 2542
PsuI RGATCY 1 cut(s) 1212
PvuII CAGCTG 2 cut(s) 1984, 3143
RseI CAYNNNNRTG 4 cut(s) 135, 591, 663, 927
SacI GAGCTC 1 cut(s) 3137
SatI GCNGC 7 cut(s) 36, 378, 1985, 2382, 2541, 2551, 2793
Sau3AI GATC 7 cut(s) 697, 919, 1212, 1253, 1380, 1441, 1522
Sau96I GGNCC 5 cut(s) 1343, 1373, 1787, 2399, 3002
ScaI AGTACT 1 cut(s) 1646
SchI GAGTC 3 cut(s) 89, 2306, 2986
ScrFI CCNGG 6 cut(s) 69, 1353, 1377, 1509, 2161, 2994
SduI GDGCHC 3 cut(s) 1977, 2637, 3137
SfaNI GCATC 9 cut(s) 364, 1178, 1216, 1522, 1802, 2002, 2005, 2037, 2677
SfcI CTRYAG 6 cut(s) 1527, 1695, 1960, 2538, 2650, 3122
SfuI TTCGAA 2 cut(s) 99, 2768
SinI GGWCC 4 cut(s) 1373, 1787, 2399, 3002
SmiMI CAYNNNNRTG 4 cut(s) 135, 591, 663, 927
SmlI CTYRAG 2 cut(s) 168, 2146
SmoI CTYRAG 2 cut(s) 168, 2146
SpeI ACTAGT 1 cut(s) 1576
SseBI AGGCCT 1 cut(s) 3117
SsiI CCGC 8 cut(s) 314, 320, 405, 518, 1816, 2265, 2369, 2957
SspI AATATT 2 cut(s) 333, 471
SspMI CTAG 8 cut(s) 29, 1577, 1677, 1824, 2202, 2207, 2249, 2948
SstI GAGCTC 1 cut(s) 3137
StuI AGGCCT 1 cut(s) 3117
StyD4I CCNGG 6 cut(s) 67, 1351, 1375, 1507, 2159, 2992
StyI CCWWGG 2 cut(s) 2854, 2928
TaaI ACNGT 9 cut(s) 263, 292, 430, 633, 1105, 1776, 1933, 2224, 2654
TaiI ACGT 2 cut(s) 2804, 3018
TaqI TCGA 7 cut(s) 99, 1172, 1618, 1771, 1945, 2300, 2768
TatI WGTACW 4 cut(s) 529, 1644, 2833, 2983
TfiI GAWTC 6 cut(s) 1268, 1516, 1859, 2183, 2582, 3028
TscAI CASTG 6 cut(s) 295, 1240, 2131, 2229, 2428, 2928
TseFI GTSAC 1 cut(s) 1556
TseI GCWGC 7 cut(s) 35, 377, 1984, 2381, 2540, 2550, 2792
Tsp45I GTSAC 1 cut(s) 1556
TspGWI ACGGA 2 cut(s) 749, 2049
TspRI CASTG 6 cut(s) 295, 1240, 2131, 2229, 2428, 2928
VpaK11BI GGWCC 4 cut(s) 1373, 1787, 2399, 3002
XagI CCTNNNNNAGG 2 cut(s) 1350, 3125
XapI RAATTY 7 cut(s) 382, 1406, 1680, 1838, 2410, 2432, 2528
XcmI CCANNNNNNNNNTGG 1 cut(s) 2343
XmiI GTMKAC 1 cut(s) 1573
XmnI GAANNNNTTC 1 cut(s) 1806
XspI CTAG 8 cut(s) 29, 1577, 1677, 1824, 2202, 2207, 2249, 2948
ZraI GACGTC 1 cut(s) 3016
ZrmI AGTACT 1 cut(s) 1646
Zsp2I ATGCAT 1 cut(s) 1995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.