Rh7BG351300

Serine threonine-protein kinase ATM-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001132
Physical Location & Seq
Forward (+)
36722500 .. 36726040
3541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG351300.1

Sequence Viewer

Length: 2724 bp
ATGGTTGAAGAATTTAGAGTTGGGAAGATGGTTGAGGATGTTAGAGTTGAGAAGATGATGGTTGAAGACGGTGGAGTTGACAGGATGGTTGAATATGATGGAGTTAAGGAGAAGGTGGATGAGGCCAAAGCATTTGAATCGAGTATGATGGGTGAAGATGATCAAGATTATGATTTTTGTGTGGGTGATATTGTGTGGGTTAAAACCAAAATAAACACATGGTGGCCTGCTAGAATTCATGATCCTGCAGATGCGTCAAAGTACGGAGGAATTGAAAGTGACCAAGAAGGTTGTCTGCTAGTTGGGTACTTTGGGATGGGTCATGTTGCTTGGTGCCGTCGATACCAACTGAAACCTTTCCCCAAGTATTTCGAGCAGATTTCAAGGCAGAGCAAGGCTAGAATTTTCGTTAAAGCTGTAGAGAAAGCTCTTGAAGAGTTTGGTCGCCGTGTCAAATTGAATATGACTTGCGCCTGTGTTTTGAAAGAAAATCGACTTTCAGTTGATGATGCTGCATCTAAGGAAGGAGTTTTGGTTCCTGACCGCAGCTCCAGTGAACTTGGTGAATTTTCAGTTACTCGTTTTGATTCTGCAAAGTTCCTTGCACATCTGAAAAATCTAGCACAGGTTGTTTCCAAAGTTGGCGTACTTGATTATACTGTTACACTTAGTCGATTATCAGCCTTCTGTACCTCCACAGGGCACAGGCAGCTGCCTATGCATCTACTTCAGGAAGGAAATGTTGATGCTCAAAGTGGTGCCGACGGAACCTTGCTGAAGCAAACAGAGGAAAATGTTTTACATCAGGAGAAGAATGACGAGAATGAAGCTTTTGCAAAGCTTTTTGGTGGGGGCAGTGCTGATAAAACTTCCATCTCAAGTTCAAAGTCCAGGAATAGAAAGATGAAGAGGGATTCTGAAATTGAAGAGACTAGCCTCATGATATCCCCAACAGTGAAAGAGAGCAAGGCTTCTAGTGTAGTAAATGGTGATGGCGGAAATGAAGGAATGATTGAAATAGGCGCCGAGTCTAGAGAGAGAAAGAAGAGTAGGTACTTGTCTTACCCATACATAAATGTGGGGCAGAAAGGATTGTCTGCGGAAGGAATGGCGGCAACAATTGATGGTGGACCCCCTTCAAATTTTAAAAGCACTGGTGAGAAGTTCTGGAGGAAATGGTATAGGAGGTTTACTGGTGTGAGTAACATATCTGGTGATTCATATTTGAAAAATGCATCTTCTGCTGAGTTGCTTTCTGAATTCTGCTCTGCAGCCGTCGACTGCCAGTATCCGATTGAAAATAAAGCATTTCATTCAGTTGCTTGGTTCATCTCTAACTTTAGGATATCAGTATTTCATGACGAGCCTTTTTGTGAAACCTACAGTAAGAACATGGCTGGTCAGGATGAGGATAGAGATGCTGAGACTTGCCTGTTGGAAAATGGTGGCCAGAATGAGGCTAAATCTGAGCCAAAGAAAAGAAATAAAAAGGCAGTTTCGAAGCATCTAGAGGGTGAAGATGCTGCCAACACGTCAAGCTTAGTTCAAAGCCCTGCAACTGCTGTAGAGGGTATGAATGGAAACCTTGGCAAGAAAAGGGGACGACCAAAGTTAGGGAGATCCAAGACTAAATCCCTTTCTGGGATGTCAGATGTCAATATAAGCATTGCCCCTGATGGCCAAATGGTACAAGATTCTTCAGCTGTCGGCCCTCTCATGCCCTGTGATAAGCCTAAGCAAAAGAAAAGAGAGAAGGTGGAAGGAGCAAGTCAAGCAAGTTTGCAGACTAAACAAACAATTGGTATACCTGATTTGAATGGTAACAGTGTTCTACCTACCGTTCTGGTTAATAAACAACAGACTATTGGCCATGCTGTTTCTGAAGGTAACATTCAGCTAGAAAAGAGATTGGGGACGGAAACTGCTTCAGAGCACTCAATATCCAATATGGCTCCTGGCTTAGTAGATGCCAATGGAAACAATTTGAAACCTGGTACATTGGTTGTTGATCTGGGGATTCGTGCTCAGGCTTTGGCATGCCTGGACTCTAAACAGGTGACCAGCCGGCTCACAGCTGAGAGTAAACCTGCCCCGAAAAAGAGAAAGAGAAAGGATAAAGTAGATCCGGGGGTTCCTGTTCAAGCTGACGGTATTCCAGATTTGAATGGAAATAGTGCTGAATGCCTTACACCTTCAAGTAAACCTGAGCGGAAGAAGAGGAGGAGAAAAGGAGAAGGTCTAGCAACCGCTCTCCTCTTGACATTTGCGTCCGGAATTCCACTGCCTTCAAAAGATGATTTAATCTCAACATTTTGTAGGTTTGGACCCTTGAAAGAATCAGAGACTCAGTTATTAAAAGATTCTAGTAGTGCACAGGTTGTATTCATGGAAAGTGCTGATGCTGGAGAGGCATTTCAGAGTTTAGAGAAGAACAACCCTTTTGGCACAAACCTTGTTGCTTACAAGCGATTTAATCTTCCATCAGTGTCCAAGGTTTTAGCCACAAGCCTATCCTCTCCGCCTACTAAGAGATTGGTGACTCCTGTACAATCGCCTGCCAAGGGACATTGCCTTGACTCCATAAGGCAGAATCTTCAGATGATGACATCAATGCTGGAGACTTCAGGTGGTACTCTTTCTCCAGAGATGAGAGCCAAACTGGAGTGTGAAATAAAAGGCCTCCTACAGAAGGTGAGCTCCACAGCTGGTTCGTCCTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

907

Amino Acids

98.91

Weight (kDa)

8.45

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 62 - 147 1.9e-13 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2266
Acc36I ACCTGC 1 cut(s) 2095
AccB1I GGYRCC 3 cut(s) 333, 758, 1022
AccBSI CCGCTC 2 cut(s) 2209, 2249
AccI GTMKAC 2 cut(s) 1278, 1804
AccIII TCCGGA 1 cut(s) 2270
AciI CCGC 7 cut(s) 544, 996, 1100, 1112, 2209, 2247, 2519
AclWI GGATC 3 cut(s) 236, 1614, 2117
AcoI YGGCCR 3 cut(s) 1447, 1678, 1867
AcsI RAATTY 7 cut(s) 11, 234, 402, 566, 1141, 1259, 2274
AcuI CTGAAG 7 cut(s) 713, 797, 1683, 1902, 1911, 2579, 2607
AcyI GRCGYC 1 cut(s) 1023
AdeI CACNNNGTG 1 cut(s) 222
AfaI GTAC 9 cut(s) 263, 308, 648, 691, 1055, 1689, 1996, 2547, 2632
AfiI CCNNNNNNNGG 6 cut(s) 699, 1456, 1613, 1641, 2561, 2689
AflIII ACRYGT 1 cut(s) 1530
AjiI CACGTC 1 cut(s) 1533
AjnI CCWGG 4 cut(s) 890, 1954, 1990, 2040
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AloI GAACNNNNNNTCC 2 cut(s) 519, 551
Alw21I GWGCWC 4 cut(s) 1935, 2026, 2374, 2699
Alw26I GTCTC 4 cut(s) 923, 1418, 2336, 2612
Alw44I GTGCAC 1 cut(s) 2370
AlwI GGATC 3 cut(s) 236, 1614, 2117
Aor13HI TCCGGA 1 cut(s) 2270
AoxI GGCC 7 cut(s) 123, 224, 1447, 1678, 1708, 1867, 2677
ApaLI GTGCAC 1 cut(s) 2370
ApeKI GCWGC 6 cut(s) 512, 546, 709, 712, 1271, 1523
ApoI RAATTY 7 cut(s) 11, 234, 402, 566, 1141, 1259, 2274
Asp700I GAANNNNTTC 1 cut(s) 356
AspLEI GCGC 2 cut(s) 473, 1025
AspS9I GGNCC 3 cut(s) 1130, 1709, 2324
AsuC2I CCSGG 1 cut(s) 2127
AsuII TTCGAA 1 cut(s) 1499
AvaII GGWCC 2 cut(s) 1130, 2324
BaeGI GKGCMC 2 cut(s) 705, 2374
BaeI ACNNNNGTAYC 2 cut(s) 1986, 2019
BalI TGGCCA 3 cut(s) 1449, 1680, 1869
BanI GGYRCC 3 cut(s) 333, 758, 1022
BanII GRGCYC 1 cut(s) 2699
BarI GAAGNNNNNNTAC 2 cut(s) 1037, 1069
BbsI GAAGAC 1 cut(s) 72
Bbv12I GWGCWC 4 cut(s) 1935, 2026, 2374, 2699
BbvI GCAGC 6 cut(s) 499, 558, 699, 721, 1283, 1510
BceAI ACGGC 3 cut(s) 321, 432, 1259
BcgI CGANNNNNNTGC 2 cut(s) 120, 154
BciT130I CCWGG 4 cut(s) 892, 1956, 1992, 2042
BciVI GTATCC 1 cut(s) 1299
BclI TGATCA 1 cut(s) 160
BcnI CCSGG 1 cut(s) 2127
BcoDI GTCTC 4 cut(s) 923, 1418, 2336, 2612
BfmI CTRYAG 6 cut(s) 246, 417, 1269, 1381, 1563, 2684
BfoI RGCGCY 1 cut(s) 1026
BfuAI ACCTGC 1 cut(s) 2095
BfuI GTATCC 1 cut(s) 1299
BisI GCNGC 7 cut(s) 513, 547, 710, 713, 1113, 1272, 1524
BlsI GCNGC 7 cut(s) 514, 548, 711, 714, 1114, 1273, 1525
Bme1390I CCNGG 5 cut(s) 892, 1956, 1992, 2042, 2127
Bme18I GGWCC 2 cut(s) 1130, 2324
BmgBI CACGTC 1 cut(s) 1533
BmgT120I GGNCC 3 cut(s) 1130, 1709, 2324
BmiI GGNNCC 9 cut(s) 335, 537, 760, 769, 1024, 1132, 1953, 2133, 2326
BmrFI CCNGG 5 cut(s) 892, 1956, 1992, 2042, 2127
BpiI GAAGAC 1 cut(s) 72
BpmI CTGGAG 6 cut(s) 535, 1189, 2424, 2625, 2636, 2681
Bpu10I CCTNAGC 3 cut(s) 1734, 2025, 2205
Bpu14I TTCGAA 1 cut(s) 1499
BpuEI CTTGAG 1 cut(s) 862
BpuMI CCSGG 1 cut(s) 2127
BsaHI GRCGYC 1 cut(s) 1023
BsaJI CCNNGG 4 cut(s) 1585, 2126, 2490, 2559
BsaWI WCCGGW 1 cut(s) 2270
BsaXI ACNNNNNCTCC 6 cut(s) 519, 533, 549, 563, 2623, 2653
Bsc4I CCNNNNNNNGG 6 cut(s) 699, 1456, 1613, 1641, 2561, 2689
Bse118I RCCGGY 1 cut(s) 2064
Bse1I ACTGG 5 cut(s) 552, 1159, 1198, 1285, 2664
Bse3DI GCAATG 2 cut(s) 1665, 2566
BseAI TCCGGA 1 cut(s) 2270
BseBI CCWGG 4 cut(s) 892, 1956, 1992, 2042
BseDI CCNNGG 4 cut(s) 1585, 2126, 2490, 2559
BseGI GGATG 6 cut(s) 43, 90, 124, 321, 1411, 1650
BseLI CCNNNNNNNGG 6 cut(s) 699, 1456, 1613, 1641, 2561, 2689
BseMI GCAATG 2 cut(s) 1665, 2566
BseMII CTCAG 7 cut(s) 1236, 1413, 1458, 2039, 2067, 2196, 2360
BseNI ACTGG 5 cut(s) 552, 1159, 1198, 1285, 2664
BseRI GAGGAG 3 cut(s) 2233, 2236, 2243
BseSI GKGCMC 2 cut(s) 705, 2374
BseXI GCAGC 6 cut(s) 499, 558, 699, 721, 1283, 1510
BshFI GGCC 7 cut(s) 125, 226, 1449, 1680, 1710, 1869, 2679
BshNI GGYRCC 3 cut(s) 333, 758, 1022
BsiHKAI GWGCWC 4 cut(s) 1935, 2026, 2374, 2699
BsiSI CCGG 3 cut(s) 2065, 2126, 2271
BslFI GGGAC 3 cut(s) 1614, 1927, 2577
BslI CCNNNNNNNGG 6 cut(s) 699, 1456, 1613, 1641, 2561, 2689
BsmAI GTCTC 4 cut(s) 923, 1418, 2336, 2612
BsmFI GGGAC 3 cut(s) 1614, 1927, 2577
BsmI GAATGC 1 cut(s) 2186
BsnI GGCC 7 cut(s) 125, 226, 1449, 1680, 1710, 1869, 2679
Bsp119I TTCGAA 1 cut(s) 1499
Bsp1286I GDGCHC 5 cut(s) 705, 1935, 2026, 2374, 2699
Bsp13I TCCGGA 1 cut(s) 2270
Bsp1407I TGTACA 1 cut(s) 2545
Bsp143I GATC 5 cut(s) 160, 241, 1619, 2008, 2122
BspACI CCGC 7 cut(s) 544, 996, 1100, 1112, 2209, 2247, 2519
BspANI GGCC 7 cut(s) 125, 226, 1449, 1680, 1710, 1869, 2679
BspCNI CTCAG 7 cut(s) 1237, 1414, 1459, 2038, 2068, 2197, 2359
BspEI TCCGGA 1 cut(s) 2270
BspHI TCATGA 3 cut(s) 238, 939, 1357
BspLI GGNNCC 9 cut(s) 335, 537, 760, 769, 1024, 1132, 1953, 2133, 2326
BspMAI CTGCAG 2 cut(s) 250, 1273
BspMI ACCTGC 1 cut(s) 2095
BspPI GGATC 3 cut(s) 236, 1614, 2117
BspT104I TTCGAA 1 cut(s) 1499
BspT107I GGYRCC 3 cut(s) 333, 758, 1022
BsrBI CCGCTC 2 cut(s) 2209, 2249
BsrDI GCAATG 2 cut(s) 1665, 2566
BsrFI RCCGGY 1 cut(s) 2064
BsrGI TGTACA 1 cut(s) 2545
BsrI ACTGG 5 cut(s) 552, 1159, 1198, 1285, 2664
BssAI RCCGGY 1 cut(s) 2064
BssECI CCNNGG 4 cut(s) 1585, 2126, 2490, 2559
BssMI GATC 5 cut(s) 160, 241, 1619, 2008, 2122
BssNAI GTATAC 1 cut(s) 1805
BssNI GRCGYC 1 cut(s) 1023
BssT1I CCWWGG 3 cut(s) 1585, 2490, 2559
Bst1107I GTATAC 1 cut(s) 1805
Bst2UI CCWGG 4 cut(s) 892, 1956, 1992, 2042
Bst4CI ACNGT 7 cut(s) 71, 661, 955, 1385, 1826, 1840, 2150
Bst6I CTCTTC 5 cut(s) 429, 902, 921, 1040, 2210
BstACI GRCGYC 1 cut(s) 1023
BstAPI GCANNNNNTGC 1 cut(s) 1241
BstAUI TGTACA 1 cut(s) 2545
BstBI TTCGAA 1 cut(s) 1499
BstC8I GCNNGC 4 cut(s) 228, 2038, 2066, 2556
BstEII GGTNACC 1 cut(s) 2056
BstENI CCTNNNNNAGG 1 cut(s) 2687
BstF5I GGATG 6 cut(s) 43, 90, 124, 321, 1411, 1650
BstH2I RGCGCY 1 cut(s) 1026
BstHHI GCGC 2 cut(s) 473, 1025
BstKTI GATC 5 cut(s) 163, 244, 1622, 2011, 2125
BstMAI GTCTC 4 cut(s) 923, 1418, 2336, 2612
BstMBI GATC 5 cut(s) 160, 241, 1619, 2008, 2122
BstMWI GCNNNNNNNGC 5 cut(s) 709, 718, 1241, 1772, 2408
BstNI CCWGG 4 cut(s) 892, 1956, 1992, 2042
BstNSI RCATGY 1 cut(s) 2040
BstPI GGTNACC 1 cut(s) 2056
BstSCI CCNGG 5 cut(s) 890, 1954, 1990, 2040, 2125
BstSFI CTRYAG 6 cut(s) 246, 417, 1269, 1381, 1563, 2684
BstSLI GKGCMC 2 cut(s) 705, 2374
BstV1I GCAGC 6 cut(s) 499, 558, 699, 721, 1283, 1510
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 2 cut(s) 1619, 2122
BstYI RGATCY 2 cut(s) 1619, 2122
BstZ17I GTATAC 1 cut(s) 1805
BsuI GTATCC 1 cut(s) 1299
BsuRI GGCC 7 cut(s) 125, 226, 1449, 1680, 1710, 1869, 2679
BtrI CACGTC 1 cut(s) 1533
BtsCI GGATG 6 cut(s) 43, 90, 124, 321, 1411, 1650
BtsI GCAGTG 2 cut(s) 862, 2279
BtsIMutI CAGTG 7 cut(s) 559, 862, 960, 1152, 1831, 2279, 2490
BveI ACCTGC 1 cut(s) 2095
Cac8I GCNNGC 4 cut(s) 228, 2038, 2066, 2556
CciI TCATGA 3 cut(s) 238, 939, 1357
CfoI GCGC 2 cut(s) 473, 1025
Cfr10I RCCGGY 1 cut(s) 2064
Cfr13I GGNCC 3 cut(s) 1130, 1709, 2324
CseI GACGC 2 cut(s) 243, 2256
CsiI ACCWGGT 1 cut(s) 1990
Csp6I GTAC 9 cut(s) 262, 307, 647, 690, 1054, 1688, 1995, 2546, 2631
CviQI GTAC 9 cut(s) 262, 307, 647, 690, 1054, 1688, 1995, 2546, 2631
DinI GGCGCC 1 cut(s) 1024
DpnI GATC 5 cut(s) 162, 243, 1621, 2010, 2124
DpnII GATC 5 cut(s) 160, 241, 1619, 2008, 2122
DraI TTTAAA 1 cut(s) 1147
DraIII CACNNNGTG 1 cut(s) 222
DrdI GACNNNNNNGTC 1 cut(s) 2266
DseDI GACNNNNNNGTC 1 cut(s) 2266
EaeI YGGCCR 3 cut(s) 1447, 1678, 1867
Eam1104I CTCTTC 5 cut(s) 429, 902, 921, 1040, 2210
EarI CTCTTC 5 cut(s) 429, 902, 921, 1040, 2210
EciI GGCGGA 2 cut(s) 1011, 2508
Ecl136II GAGCTC 1 cut(s) 2697
Eco130I CCWWGG 3 cut(s) 1585, 2490, 2559
Eco147I AGGCCT 1 cut(s) 2679
Eco24I GRGCYC 1 cut(s) 2699
Eco32I GATATC 2 cut(s) 945, 1347
Eco47I GGWCC 2 cut(s) 1130, 2324
Eco53kI GAGCTC 1 cut(s) 2697
Eco57I CTGAAG 7 cut(s) 713, 797, 1683, 1902, 1911, 2579, 2607
Eco91I GGTNACC 1 cut(s) 2056
EcoICRI GAGCTC 1 cut(s) 2697
EcoNI CCTNNNNNAGG 1 cut(s) 2687
EcoO65I GGTNACC 1 cut(s) 2056
EcoRI GAATTC 3 cut(s) 234, 1259, 2274
EcoRII CCWGG 4 cut(s) 890, 1954, 1990, 2040
EcoRV GATATC 2 cut(s) 945, 1347
EcoT14I CCWWGG 3 cut(s) 1585, 2490, 2559
EcoT22I ATGCAT 2 cut(s) 723, 1237
EcoT38I GRGCYC 1 cut(s) 2699
EgeI GGCGCC 1 cut(s) 1024
EheI GGCGCC 1 cut(s) 1024
ErhI CCWWGG 3 cut(s) 1585, 2490, 2559
FaqI GGGAC 3 cut(s) 1614, 1927, 2577
FbaI TGATCA 1 cut(s) 160
FblI GTMKAC 2 cut(s) 1278, 1804
Fnu4HI GCNGC 7 cut(s) 513, 547, 710, 713, 1113, 1272, 1524
FokI GGATG 6 cut(s) 50, 97, 131, 328, 1418, 1657
FriOI GRGCYC 1 cut(s) 2699
Fsp4HI GCNGC 7 cut(s) 513, 547, 710, 713, 1113, 1272, 1524
GlaI GCGC 2 cut(s) 472, 1024
GluI GCNGC 7 cut(s) 513, 547, 710, 713, 1113, 1272, 1524
GsuI CTGGAG 6 cut(s) 535, 1189, 2424, 2625, 2636, 2681
HaeII RGCGCY 1 cut(s) 1026
HaeIII GGCC 7 cut(s) 125, 226, 1449, 1680, 1710, 1869, 2679
HapII CCGG 3 cut(s) 2065, 2126, 2271
HgaI GACGC 2 cut(s) 243, 2256
HhaI GCGC 2 cut(s) 473, 1025
Hin1I GRCGYC 1 cut(s) 1023
Hin6I GCGC 2 cut(s) 471, 1023
HinP1I GCGC 2 cut(s) 471, 1023
HincII GTYRAC 2 cut(s) 79, 1279
HindII GTYRAC 2 cut(s) 79, 1279
HindIII AAGCTT 3 cut(s) 828, 839, 1537
HpaII CCGG 3 cut(s) 2065, 2126, 2271
Hpy166II GTNNAC 9 cut(s) 79, 557, 1130, 1191, 1279, 1805, 2084, 2201, 2372
Hpy8I GTNNAC 9 cut(s) 79, 557, 1130, 1191, 1279, 1805, 2084, 2201, 2372
Hpy99I CGWCG 3 cut(s) 342, 767, 1280
HpyCH4III ACNGT 7 cut(s) 71, 661, 955, 1385, 1826, 1840, 2150
HpyCH4IV ACGT 1 cut(s) 1532
HpyF10VI GCNNNNNNNGC 5 cut(s) 709, 718, 1241, 1772, 2408
HpySE526I ACGT 1 cut(s) 1532
Hsp92I GRCGYC 1 cut(s) 1023
HspAI GCGC 2 cut(s) 471, 1023
KasI GGCGCC 1 cut(s) 1022
Kpn2I TCCGGA 1 cut(s) 2270
KroI GCCGGC 1 cut(s) 2064
KroNI GCCGGC 1 cut(s) 2066
Ksp22I TGATCA 1 cut(s) 160
Kzo9I GATC 5 cut(s) 160, 241, 1619, 2008, 2122
LmnI GCTCC 4 cut(s) 554, 1763, 1957, 2702
Lsp1109I GCAGC 6 cut(s) 499, 558, 699, 721, 1283, 1510
MabI ACCWGGT 1 cut(s) 1990
MaeII ACGT 1 cut(s) 1532
MaeIII GTNAC 8 cut(s) 278, 574, 661, 1202, 1820, 1886, 2056, 2536
MalI GATC 5 cut(s) 162, 243, 1621, 2010, 2124
MbiI CCGCTC 2 cut(s) 2209, 2249
MboI GATC 5 cut(s) 160, 241, 1619, 2008, 2122
MfeI CAATTG 2 cut(s) 1119, 1797
MflI RGATCY 2 cut(s) 1619, 2122
MhlI GDGCHC 5 cut(s) 705, 1935, 2026, 2374, 2699
MlsI TGGCCA 3 cut(s) 1449, 1680, 1869
MluNI TGGCCA 3 cut(s) 1449, 1680, 1869
Mly113I GGCGCC 1 cut(s) 1023
MlyI GAGTC 5 cut(s) 1037, 2039, 2338, 2533, 2570
MmeI TCCRAC 1 cut(s) 1416
Mox20I TGGCCA 3 cut(s) 1449, 1680, 1869
Mph1103I ATGCAT 2 cut(s) 723, 1237
MroI TCCGGA 1 cut(s) 2270
MroNI GCCGGC 1 cut(s) 2064
MroXI GAANNNNTTC 1 cut(s) 356
MscI TGGCCA 3 cut(s) 1449, 1680, 1869
MseI TTAA 9 cut(s) 105, 201, 411, 1146, 1848, 2300, 2354, 2472, 2722
MslI CAYNNNNRTG 1 cut(s) 1076
Msp20I TGGCCA 3 cut(s) 1449, 1680, 1869
MspA1I CMGCKG 4 cut(s) 712, 1703, 2075, 2705
MspI CCGG 3 cut(s) 2065, 2126, 2271
MspR9I CCNGG 5 cut(s) 892, 1956, 1992, 2042, 2127
MunI CAATTG 2 cut(s) 1119, 1797
Mva1269I GAATGC 1 cut(s) 2186
MvaI CCWGG 4 cut(s) 892, 1956, 1992, 2042
MwoI GCNNNNNNNGC 5 cut(s) 709, 718, 1241, 1772, 2408
NaeI GCCGGC 1 cut(s) 2066
NarI GGCGCC 1 cut(s) 1023
NciI CCSGG 1 cut(s) 2127
NdeII GATC 5 cut(s) 160, 241, 1619, 2008, 2122
NgoMIV GCCGGC 1 cut(s) 2064
NlaIV GGNNCC 9 cut(s) 335, 537, 760, 769, 1024, 1132, 1953, 2133, 2326
NmeAIII GCCGAG 1 cut(s) 1051
NmuCI GTSAC 3 cut(s) 278, 2056, 2536
NsiI ATGCAT 2 cut(s) 723, 1237
NspI RCATGY 1 cut(s) 2040
NspV TTCGAA 1 cut(s) 1499
PaeI GCATGC 1 cut(s) 2040
PagI TCATGA 3 cut(s) 238, 939, 1357
PceI AGGCCT 1 cut(s) 2679
PctI GAATGC 1 cut(s) 2186
PdiI GCCGGC 1 cut(s) 2066
PdmI GAANNNNTTC 1 cut(s) 356
PfeI GAWTC 9 cut(s) 137, 587, 914, 1217, 1694, 2017, 2336, 2360, 2590
PfoI TCCNGGA 1 cut(s) 890
PkrI GCNGC 7 cut(s) 514, 548, 711, 714, 1114, 1273, 1525
PleI GAGTC 5 cut(s) 1036, 2039, 2338, 2533, 2570
PluTI GGCGCC 1 cut(s) 1026
PpsI GAGTC 5 cut(s) 1036, 2039, 2338, 2533, 2570
Psp124BI GAGCTC 1 cut(s) 2699
Psp6I CCWGG 4 cut(s) 890, 1954, 1990, 2040
PspEI GGTNACC 1 cut(s) 2056
PspGI CCWGG 4 cut(s) 890, 1954, 1990, 2040
PspN4I GGNNCC 9 cut(s) 335, 537, 760, 769, 1024, 1132, 1953, 2133, 2326
PspPI GGNCC 3 cut(s) 1130, 1709, 2324
PstI CTGCAG 2 cut(s) 250, 1273
PsuI RGATCY 2 cut(s) 1619, 2122
PvuII CAGCTG 4 cut(s) 712, 1703, 2075, 2705
RsaI GTAC 9 cut(s) 263, 308, 648, 691, 1055, 1689, 1996, 2547, 2632
RsaNI GTAC 9 cut(s) 262, 307, 647, 690, 1054, 1688, 1995, 2546, 2631
RseI CAYNNNNRTG 1 cut(s) 1076
SacI GAGCTC 1 cut(s) 2699
SalI GTCGAC 1 cut(s) 1277
SaqAI TTAA 9 cut(s) 105, 201, 411, 1146, 1848, 2300, 2354, 2472, 2722
SatI GCNGC 7 cut(s) 513, 547, 710, 713, 1113, 1272, 1524
Sau3AI GATC 5 cut(s) 160, 241, 1619, 2008, 2122
Sau96I GGNCC 3 cut(s) 1130, 1709, 2324
SchI GAGTC 5 cut(s) 1037, 2039, 2338, 2533, 2570
ScrFI CCNGG 5 cut(s) 892, 1956, 1992, 2042, 2127
SduI GDGCHC 5 cut(s) 705, 1935, 2026, 2374, 2699
SexAI ACCWGGT 1 cut(s) 1990
SfcI CTRYAG 6 cut(s) 246, 417, 1269, 1381, 1563, 2684
SfoI GGCGCC 1 cut(s) 1024
SfuI TTCGAA 1 cut(s) 1499
SinI GGWCC 2 cut(s) 1130, 2324
SmiMI CAYNNNNRTG 1 cut(s) 1076
SmlI CTYRAG 1 cut(s) 877
SmoI CTYRAG 1 cut(s) 877
SphI GCATGC 1 cut(s) 2040
SseBI AGGCCT 1 cut(s) 2679
SsiI CCGC 7 cut(s) 544, 996, 1100, 1112, 2209, 2247, 2519
SspDI GGCGCC 1 cut(s) 1022
SstI GAGCTC 1 cut(s) 2699
StuI AGGCCT 1 cut(s) 2679
StyD4I CCNGG 5 cut(s) 890, 1954, 1990, 2040, 2125
StyI CCWWGG 3 cut(s) 1585, 2490, 2559
TaaI ACNGT 7 cut(s) 71, 661, 955, 1385, 1826, 1840, 2150
TaiI ACGT 1 cut(s) 1535
TaqI TCGA 7 cut(s) 140, 340, 372, 493, 673, 1278, 1499
TatI WGTACW 1 cut(s) 2545
TauI GCSGC 1 cut(s) 1115
TfiI GAWTC 9 cut(s) 137, 587, 914, 1217, 1694, 2017, 2336, 2360, 2590
Tru1I TTAA 9 cut(s) 105, 201, 411, 1146, 1848, 2300, 2354, 2472, 2722
Tru9I TTAA 9 cut(s) 105, 201, 411, 1146, 1848, 2300, 2354, 2472, 2722
TscAI CASTG 7 cut(s) 559, 862, 960, 1159, 1831, 2286, 2490
TseFI GTSAC 3 cut(s) 278, 2056, 2536
TseI GCWGC 6 cut(s) 512, 546, 709, 712, 1271, 1523
Tsp45I GTSAC 3 cut(s) 278, 2056, 2536
TspGWI ACGGA 3 cut(s) 279, 780, 1931
TspRI CASTG 7 cut(s) 559, 862, 960, 1159, 1831, 2286, 2490
VneI GTGCAC 1 cut(s) 2370
VpaK11BI GGWCC 2 cut(s) 1130, 2324
XagI CCTNNNNNAGG 1 cut(s) 2687
XapI RAATTY 7 cut(s) 11, 234, 402, 566, 1141, 1259, 2274
XbaI TCTAGA 2 cut(s) 1031, 1507
XceI RCATGY 1 cut(s) 2040
XmiI GTMKAC 2 cut(s) 1278, 1804
XmnI GAANNNNTTC 1 cut(s) 356
Zsp2I ATGCAT 2 cut(s) 723, 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.