Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0002177

Physical Location & Seq

Genomic Coordinates Forward (+)

1520643 .. 1524189

Gene Structure 3547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g02380.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGATTTCGTGGCACGACCTTTACAACGTGTTGACGGCGGTGGTGCCGCTGTACGTGGCGATGATATTAGCCTACGGCTCCGTCCGGTGGTGGAAGATCTTCTCCCCTGACCAGTGCTCCGGCATCAACAGCTTCGTCGCGATATTCGCTGTCCCCTTGCTCTCCTTCCACTTTATCTCCACCAACGACCCCTACACCATGAACTTCCGGTTCGTCGCCGCCGATACCCTCCAGAAAATCATCATGCTCTTCGCCCTCAGCCTATGGACCAACTTCACCCGCAACGGCAGCCTAGAGTGGCTGATTACGATTTTCTCCCTCTCCACCCTCCCCAACACTCTCGTCATGGGGATTCCGCTGTTAATCGCCATGTACGGCAAAAAAATCCCGGAATCCGGCAGCCTCATGGTGCAGCTGGTGGTGGTCCAGTGCATCATCTGGTACACTCTCCTCCTCTTCCTGTTCGAGTACCGCGGGGCCAAGCTCTTAATCATGGAGCAGTTTCCGGAGACCGCCGCCTCCATCGTCTCTTTTAAACTCGACTCCGACGTCGTTTCGCTCGACGGCAGGGATTTTTTGGAAACCGATGCCGAAATCGGTAACGACGGAAAGCTCCACGTCAACGTCCGGAAGTCCAACGCATCGAGGCGGTCGTTCTCTGAAATGACGCCCCGGCAGTCTAACCTCAGCAGCGCGGAGATTTACAGCCTGAGCTCCTCCCGAAATCCCACCCCGCGAGGCTCCAACTTTAACCCCTCCGATTTGTACTCCATGATGGGGGTTCATGGGTTCAACACGCGCCACTCCAACTTCGGACCTGCCGACTTGTATTCGGTTCAGTCCTCCCGCGGTCCGACTCCACGGCCCTCCAATTTCGAGGAGAATTGCGCGGCTCAGACCGTTAAGACGGTACCCGCATCGTACCCGGCCCCGAATCCTGAATTCTCGGCGCCGACAGCTAAAAATAGCAACACAATTCAACAGCAGCAGAAGCCGCAAGTGGCAGCGCAACCCGTTTCGGATGGTGCTGCTGCTAAAACGAATAGTCATCACGATGCTAAAGAGCTCCACATGTTCGTTTGGAGCTCCAGCGATTCCCCTGTTTCTGAAGGCAGTGGGCTCCATGTTTTTGGTGGGACCAATTTCGGTGCTGCCGAGGAATCTGGACGGTCCGATCGGGGCGCCAAGGAGATCAGAATGCTTGTTGCTGATCACCTCCAAAATGGAGAAAACAAAGTGGCAGTTCCGGAGACTGCGCCAACGGCGGAGGTGTACGGCGGGGAAGCGTTCAGCTTTGGCGGGAGGGGTGGCGAGGTAGAGGAGGCTGAAAGGGAAAAAGAGGGAACCACAGGGCTTAATAAGCTGGCGTCCAGCTCCACTGCAGAGCTCCACACAAGGGGCGGAAGGCAAATGCCGCCGGCGAGCGTTATGACCCGTCTGATCTTGATCATGGTTTGGCGGAAGCTTATCCGCAATCCCAACACGTATTCCAGCCTCATTGGTCTCATCTGGGCTCTCATCGCTTTCCGGTGGCATGTGGGGATGCCAAAAATAGTAGAAAAGTCAATTTCCATACTGTCTGATGCTGGGCTTGGAATGGCTATGTTCAGCTTAGGTCTTTTCATGGCACTTCAACCCAGGATAATAGCATGTGGGAACTCAGTTGGTGGATATGCAATGGCAGCAAGGTTCCTCACTGGCCCCGCCGTTATGGCTGCCGCCTCCATTGCTGTTGGCCTCCGGGGCACCCTCCTCCACTTAGCTATTGTCCAGGCTGCTCTTCCTCAAGGAGTTGTTCCCTTTGTCTTTGCCAAGGAGTACAATGTTCATCCAGCCATTCTTAGCACTGCGGTTATTTTCGGAATGTTGATAGCGTTACCTATTACGTTGGTCTACTATATTCTTCTGGGATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009921 GO:0009926 GO:0009942 GO:0009958 GO:0009966 GO:0009986 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0012506 GO:0015562 GO:0016020 GO:0016043 GO:0016049 GO:0016328 GO:0021700 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098796 GO:0098797 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

639

Amino Acids

69.44

Weight (kDa)

7.74

Isoelectric Point (pI)

33.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23080 AT1G23080 AT1G23080 AT1G23080 AT1G70940 AT2G01420 AT2G01420 AT2G01420
fragaria_vesca	FvH4_4g32450 FvH4_4g32450 FvH4_4g32450 FvH4_6g35590
malus_domestica	MD13G1025300.v1.1 MD16G1027900.v1.1
prunus_persica	Prupe.1G324900_v2.0.a1 Prupe.1G324900_v2.0.a1
pyrus_communis	pycom13g02370 pycom13g02380 pycom16g02380
rosa_chinensis	RchiOBHm_Chr4g0441311 RchiOBHm_Chr6g0249491
rosa_laevigata	RLG00000006103 RLG00000014076 RLG00000023177
rosa_multiflora	Rmu_co8277815.1_g000001 Rmu_co8310335.1_g000001 Rmu_sc0001891.1_g000054 Rmu_sc0003778.1_g000028 Rmu_sc0010320.1_g000001 Rmu_sc0012909.1_g000005 Rmu_sc0015560.1_g000005
rosa_roxburghii	Rroxscaffold_5G00382190
rosa_rugosa	Rorug01G0483300 Rorug04G0332300
rosa_samantha	Rh3BG354500 Rh4AG384200 Rh4BG088700 Rh4BG167500 Rh4BG398300 Rh4CG413400 Rh4DG390900 Rh6AG118800
rosa_wichuraiana	Rw4G033160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	548
AatII	GACGTC	1 cut(s)	552
Acc36I	ACCTGC	1 cut(s)	826
Acc65I	GGTACC	1 cut(s)	910
AccB1I	GGYRCC	5 cut(s)	43, 910, 949, 1181, 1745
AccI	GTMKAC	1 cut(s)	1893
AccII	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
AccIII	TCCGGA	3 cut(s)	505, 627, 1246
AcsI	RAATTY	1 cut(s)	941
AcuI	CTGAAG	1 cut(s)	1128
AcyI	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
AfaI	GTAC	9 cut(s)	53, 374, 443, 470, 767, 912, 923, 1274, 1820
AfiI	CCNNNNNNNGG	4 cut(s)	87, 395, 777, 1396
AflIII	ACRYGT	3 cut(s)	27, 1071, 1482
AgsI	TTSAA	3 cut(s)	793, 980, 1634
AjiI	CACGTC	1 cut(s)	619
AjnI	CCWGG	2 cut(s)	1637, 1770
Alw21I	GWGCWC	5 cut(s)	119, 716, 1068, 1088, 1389
Alw26I	GTCTC	4 cut(s)	503, 532, 1244, 1508
Aor13HI	TCCGGA	3 cut(s)	505, 627, 1246
AoxI	GGCC	5 cut(s)	477, 863, 927, 1699, 1735
ApoI	RAATTY	1 cut(s)	941
Asp700I	GAANNNNTTC	1 cut(s)	98
Asp718I	GGTACC	1 cut(s)	910
AspLEI	GCGC	7 cut(s)	695, 801, 890, 952, 1009, 1184, 1258
AsuC2I	CCSGG	4 cut(s)	389, 673, 926, 1742
AsuHPI	GGTGA	2 cut(s)	268, 1205
AvaII	GGWCC	6 cut(s)	267, 424, 815, 851, 1137, 1170
BaeGI	GKGCMC	1 cut(s)	1748
BanI	GGYRCC	5 cut(s)	43, 910, 949, 1181, 1745
BanII	GRGCYC	6 cut(s)	716, 1068, 1088, 1122, 1389, 1516
Bbv12I	GWGCWC	5 cut(s)	119, 716, 1068, 1088, 1389
BbvCI	CCTCAGC	2 cut(s)	257, 686
BccI	CCATC	3 cut(s)	530, 769, 1016
BceAI	ACGGC	9 cut(s)	51, 91, 301, 391, 580, 878, 1278, 1291, 1691
BciT130I	CCWGG	2 cut(s)	1639, 1772
BclI	TGATCA	2 cut(s)	1210, 1446
BcnI	CCSGG	4 cut(s)	389, 673, 926, 1742
BcoDI	GTCTC	4 cut(s)	503, 532, 1244, 1508
BfaI	CTAG	1 cut(s)	293
BfmI	CTRYAG	1 cut(s)	1380
BfoI	RGCGCY	2 cut(s)	953, 1185
BfuAI	ACCTGC	1 cut(s)	826
BglI	GCCNNNNNGGC	2 cut(s)	1712, 1743
BglII	AGATCT	1 cut(s)	96
Bme1390I	CCNGG	6 cut(s)	389, 673, 926, 1639, 1742, 1772
Bme18I	GGWCC	6 cut(s)	267, 424, 815, 851, 1137, 1170
BmgBI	CACGTC	1 cut(s)	619
BmrFI	CCNGG	6 cut(s)	389, 673, 926, 1639, 1742, 1772
BmsI	GCATC	8 cut(s)	132, 441, 577, 650, 926, 1045, 1533, 1573
BpmI	CTGGAG	2 cut(s)	215, 1072
Bpu10I	CCTNAGC	4 cut(s)	257, 686, 710, 1612
BpuEI	CTTGAG	1 cut(s)	1770
BpuMI	CCSGG	4 cut(s)	389, 673, 926, 1742
BsaAI	YACGTR	2 cut(s)	55, 1485
BsaBI	GATNNNNATC	1 cut(s)	1445
BsaHI	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
BsaI	GGTCTC	2 cut(s)	503, 1508
BsaJI	CCNNGG	9 cut(s)	472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BsaWI	WCCGGW	6 cut(s)	84, 207, 505, 627, 1246, 1527
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 161, 191
Bsc4I	CCNNNNNNNGG	4 cut(s)	87, 395, 777, 1396
Bse118I	RCCGGY	1 cut(s)	1417
Bse1I	ACTGG	3 cut(s)	112, 427, 1702
Bse3DI	GCAATG	2 cut(s)	1683, 1725
Bse8I	GATNNNNATC	1 cut(s)	1445
BseAI	TCCGGA	3 cut(s)	505, 627, 1246
BseBI	CCWGG	2 cut(s)	1639, 1772
BseDI	CCNNGG	9 cut(s)	472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BseGI	GGATG	3 cut(s)	1027, 1548, 1828
BseJI	GATNNNNATC	1 cut(s)	1445
BseLI	CCNNNNNNNGG	4 cut(s)	87, 395, 777, 1396
BseMI	GCAATG	2 cut(s)	1683, 1725
BseMII	CTCAG	5 cut(s)	271, 700, 701, 908, 1674
BseNI	ACTGG	3 cut(s)	112, 427, 1702
BseRI	GAGGAG	6 cut(s)	440, 443, 706, 893, 1334, 1742
BseSI	GKGCMC	1 cut(s)	1748
BseYI	CCCAGC	1 cut(s)	1586
BsgI	GTGCAG	1 cut(s)	431
Bsh1236I	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
Bsh1285I	CGRYCG	2 cut(s)	653, 1177
BshFI	GGCC	5 cut(s)	479, 865, 929, 1701, 1737
BshNI	GGYRCC	5 cut(s)	43, 910, 949, 1181, 1745
BsiEI	CGRYCG	2 cut(s)	653, 1177
BsiHKAI	GWGCWC	5 cut(s)	119, 716, 1068, 1088, 1389
BslFI	GGGAC	2 cut(s)	137, 1150
BslI	CCNNNNNNNGG	4 cut(s)	87, 395, 777, 1396
BsmAI	GTCTC	4 cut(s)	503, 532, 1244, 1508
BsmBI	CGTCTC	1 cut(s)	532
BsmFI	GGGAC	2 cut(s)	137, 1150
BsmI	GAATGC	1 cut(s)	1203
BsnI	GGCC	5 cut(s)	479, 865, 929, 1701, 1737
Bso31I	GGTCTC	2 cut(s)	503, 1508
Bsp1286I	GDGCHC	8 cut(s)	119, 716, 1068, 1088, 1122, 1389, 1516, 1748
Bsp13I	TCCGGA	3 cut(s)	505, 627, 1246
Bsp143I	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
Bsp68I	TCGCGA	1 cut(s)	140
BspANI	GGCC	5 cut(s)	479, 865, 929, 1701, 1737
BspCNI	CTCAG	5 cut(s)	270, 699, 702, 907, 1673
BspEI	TCCGGA	3 cut(s)	505, 627, 1246
BspFNI	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
BspMAI	CTGCAG	1 cut(s)	1384
BspMI	ACCTGC	1 cut(s)	826
BspQI	GCTCTTC	2 cut(s)	254, 1785
BspT107I	GGYRCC	5 cut(s)	43, 910, 949, 1181, 1745
BspTNI	GGTCTC	2 cut(s)	503, 1508
BsrDI	GCAATG	2 cut(s)	1683, 1725
BsrFI	RCCGGY	1 cut(s)	1417
BsrI	ACTGG	3 cut(s)	112, 427, 1702
BssAI	RCCGGY	1 cut(s)	1417
BssECI	CCNNGG	9 cut(s)	472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BssMI	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
BssNI	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
BssT1I	CCWWGG	2 cut(s)	1185, 1812
Bst2UI	CCWGG	2 cut(s)	1639, 1772
Bst4CI	ACNGT	4 cut(s)	901, 910, 1170, 1578
Bst6I	CTCTTC	3 cut(s)	254, 461, 1785
BstACI	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
BstBAI	YACGTR	2 cut(s)	55, 1485
BstC8I	GCNNGC	3 cut(s)	1365, 1419, 1423
BstDEI	CTNAG	8 cut(s)	257, 686, 710, 894, 1612, 1660, 1759, 1841
BstDSI	CCRYGG	3 cut(s)	472, 847, 860
BstF5I	GGATG	3 cut(s)	1027, 1548, 1828
BstFNI	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
BstH2I	RGCGCY	2 cut(s)	953, 1185
BstHHI	GCGC	7 cut(s)	695, 801, 890, 952, 1009, 1184, 1258
BstKTI	GATC	6 cut(s)	99, 1177, 1194, 1213, 1443, 1449
BstMAI	GTCTC	4 cut(s)	503, 532, 1244, 1508
BstMBI	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
BstMCI	CGRYCG	2 cut(s)	653, 1177
BstNI	CCWGG	2 cut(s)	1639, 1772
BstNSI	RCATGY	3 cut(s)	1075, 1538, 1653
BstSCI	CCNGG	6 cut(s)	387, 671, 924, 1637, 1740, 1770
BstSFI	CTRYAG	1 cut(s)	1380
BstSLI	GKGCMC	1 cut(s)	1748
BstUI	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
BstX2I	RGATCY	1 cut(s)	96
BstXI	CCANNNNNNTGG	1 cut(s)	1130
BstYI	RGATCY	1 cut(s)	96
BsuRI	GGCC	5 cut(s)	479, 865, 929, 1701, 1737
BtgI	CCRYGG	3 cut(s)	472, 847, 860
BtgZI	GCGATG	2 cut(s)	74, 1504
BtrI	CACGTC	1 cut(s)	619
BtsCI	GGATG	3 cut(s)	1027, 1548, 1828
BtsI	GCAGTG	3 cut(s)	1120, 1377, 1845
BtsIMutI	CAGTG	6 cut(s)	119, 434, 1120, 1377, 1695, 1845
BtuMI	TCGCGA	1 cut(s)	140
BveI	ACCTGC	1 cut(s)	826
Cac8I	GCNNGC	3 cut(s)	1365, 1419, 1423
CfoI	GCGC	7 cut(s)	695, 801, 890, 952, 1009, 1184, 1258
Cfr10I	RCCGGY	1 cut(s)	1417
Cfr42I	CCGCGG	2 cut(s)	475, 850
CpoI	CGGWCCG	2 cut(s)	851, 1170
CseI	GACGC	2 cut(s)	676, 1356
Csp6I	GTAC	9 cut(s)	52, 373, 442, 469, 766, 911, 922, 1273, 1819
CspI	CGGWCCG	2 cut(s)	851, 1170
CviQI	GTAC	9 cut(s)	52, 373, 442, 469, 766, 911, 922, 1273, 1819
DdeI	CTNAG	8 cut(s)	257, 686, 710, 894, 1612, 1660, 1759, 1841
DinI	GGCGCC	2 cut(s)	951, 1183
DpnI	GATC	6 cut(s)	98, 1176, 1193, 1212, 1442, 1448
DpnII	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
DraI	TTTAAA	1 cut(s)	535
DrdI	GACNNNNNNGTC	1 cut(s)	548
DseDI	GACNNNNNNGTC	1 cut(s)	548
Eam1104I	CTCTTC	3 cut(s)	254, 461, 1785
EarI	CTCTTC	3 cut(s)	254, 461, 1785
EciI	GGCGGA	3 cut(s)	1280, 1416, 1474
Ecl136II	GAGCTC	4 cut(s)	714, 1066, 1086, 1387
Eco130I	CCWWGG	2 cut(s)	1185, 1812
Eco24I	GRGCYC	6 cut(s)	716, 1068, 1088, 1122, 1389, 1516
Eco31I	GGTCTC	2 cut(s)	503, 1508
Eco47I	GGWCC	6 cut(s)	267, 424, 815, 851, 1137, 1170
Eco53kI	GAGCTC	4 cut(s)	714, 1066, 1086, 1387
Eco57I	CTGAAG	1 cut(s)	1128
EcoICRI	GAGCTC	4 cut(s)	714, 1066, 1086, 1387
EcoRI	GAATTC	1 cut(s)	941
EcoRII	CCWGG	2 cut(s)	1637, 1770
EcoT14I	CCWWGG	2 cut(s)	1185, 1812
EcoT38I	GRGCYC	6 cut(s)	716, 1068, 1088, 1122, 1389, 1516
EgeI	GGCGCC	2 cut(s)	951, 1183
EheI	GGCGCC	2 cut(s)	951, 1183
ErhI	CCWWGG	2 cut(s)	1185, 1812
Esp3I	CGTCTC	1 cut(s)	532
FaqI	GGGAC	2 cut(s)	137, 1150
FauI	CCCGC	8 cut(s)	287, 467, 741, 854, 922, 1271, 1292, 1711
FbaI	TGATCA	2 cut(s)	1210, 1446
FblI	GTMKAC	1 cut(s)	1893
FokI	GGATG	3 cut(s)	1034, 1555, 1815
FriOI	GRGCYC	6 cut(s)	716, 1068, 1088, 1122, 1389, 1516
FspBI	CTAG	1 cut(s)	293
GlaI	GCGC	7 cut(s)	694, 800, 889, 951, 1008, 1183, 1257
GsaI	CCCAGC	1 cut(s)	1590
GsuI	CTGGAG	2 cut(s)	215, 1072
HaeII	RGCGCY	2 cut(s)	953, 1185
HaeIII	GGCC	5 cut(s)	479, 865, 929, 1701, 1737
HgaI	GACGC	2 cut(s)	676, 1356
HhaI	GCGC	7 cut(s)	695, 801, 890, 952, 1009, 1184, 1258
Hin1I	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
Hin6I	GCGC	7 cut(s)	693, 799, 888, 950, 1007, 1182, 1256
HinP1I	GCGC	7 cut(s)	693, 799, 888, 950, 1007, 1182, 1256
HincII	GTYRAC	2 cut(s)	33, 622
HindII	GTYRAC	2 cut(s)	33, 622
HindIII	AAGCTT	1 cut(s)	1463
HinfI	GANTC	7 cut(s)	352, 392, 542, 856, 934, 1094, 1160
HphI	GGTGA	2 cut(s)	268, 1205
Hpy166II	GTNNAC	5 cut(s)	33, 444, 622, 1273, 1894
Hpy8I	GTNNAC	5 cut(s)	33, 444, 622, 1273, 1894
Hpy99I	CGWCG	6 cut(s)	140, 218, 551, 554, 566, 608
HpyAV	CCTTC	3 cut(s)	175, 1103, 1398
HpyCH4III	ACNGT	4 cut(s)	901, 910, 1170, 1578
HpyCH4IV	ACGT	7 cut(s)	27, 54, 549, 618, 624, 1484, 1886
HpyCH4V	TGCA	4 cut(s)	412, 432, 1382, 1676
HpyF3I	CTNAG	8 cut(s)	257, 686, 710, 894, 1612, 1660, 1759, 1841
HpySE526I	ACGT	7 cut(s)	27, 54, 549, 618, 624, 1484, 1886
Hsp92I	GRCGYC	5 cut(s)	549, 668, 950, 1182, 1367
HspAI	GCGC	7 cut(s)	693, 799, 888, 950, 1007, 1182, 1256
KasI	GGCGCC	2 cut(s)	949, 1181
Kpn2I	TCCGGA	3 cut(s)	505, 627, 1246
KpnI	GGTACC	1 cut(s)	914
KroI	GCCGGC	1 cut(s)	1417
KroNI	GCCGGC	1 cut(s)	1419
Ksp22I	TGATCA	2 cut(s)	1210, 1446
KspI	CCGCGG	2 cut(s)	475, 850
Kzo9I	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
LguI	GCTCTTC	2 cut(s)	254, 1785
LweI	GCATC	8 cut(s)	132, 441, 577, 650, 926, 1045, 1533, 1573
MaeI	CTAG	1 cut(s)	293
MaeII	ACGT	7 cut(s)	27, 54, 549, 618, 624, 1484, 1886
MaeIII	GTNAC	2 cut(s)	599, 1875
MalI	GATC	6 cut(s)	98, 1176, 1193, 1212, 1442, 1448
MboI	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
MboII	GAAGA	6 cut(s)	91, 106, 241, 448, 1772, 1895
MflI	RGATCY	1 cut(s)	96
MhlI	GDGCHC	8 cut(s)	119, 716, 1068, 1088, 1122, 1389, 1516, 1748
MluCI	AATT	6 cut(s)	871, 883, 941, 975, 1141, 1566
Mly113I	GGCGCC	2 cut(s)	950, 1182
MlyI	GAGTC	2 cut(s)	536, 850
MmeI	TCCRAC	5 cut(s)	570, 660, 768, 831, 878
MreI	CGCCGGCG	1 cut(s)	1417
MroI	TCCGGA	3 cut(s)	505, 627, 1246
MroNI	GCCGGC	1 cut(s)	1417
MroXI	GAANNNNTTC	1 cut(s)	98
MseI	TTAA	6 cut(s)	362, 488, 534, 750, 903, 1356
MslI	CAYNNNNRTG	1 cut(s)	1053
MspA1I	CMGCKG	5 cut(s)	49, 358, 415, 474, 849
MspR9I	CCNGG	6 cut(s)	389, 673, 926, 1639, 1742, 1772
Mva1269I	GAATGC	1 cut(s)	1203
MvaI	CCWGG	2 cut(s)	1639, 1772
MvnI	CGCG	7 cut(s)	140, 474, 695, 736, 799, 849, 890
NaeI	GCCGGC	1 cut(s)	1419
NarI	GGCGCC	2 cut(s)	950, 1182
NciI	CCSGG	4 cut(s)	389, 673, 926, 1742
NdeII	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
NgoMIV	GCCGGC	1 cut(s)	1417
NmeAIII	GCCGAG	2 cut(s)	926, 1180
NruI	TCGCGA	1 cut(s)	140
NspI	RCATGY	3 cut(s)	1075, 1538, 1653
PciI	ACATGT	1 cut(s)	1071
PciSI	GCTCTTC	2 cut(s)	254, 1785
PcsI	WCGNNNNNNNCGW	6 cut(s)	219, 546, 558, 650, 819, 1152
PctI	GAATGC	1 cut(s)	1203
PdiI	GCCGGC	1 cut(s)	1419
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	5 cut(s)	352, 392, 934, 1094, 1160
PfoI	TCCNGGA	1 cut(s)	387
Ple19I	CGATCG	1 cut(s)	1177
PleI	GAGTC	2 cut(s)	536, 850
PluTI	GGCGCC	2 cut(s)	953, 1185
PpsI	GAGTC	2 cut(s)	536, 850
Ppu21I	YACGTR	2 cut(s)	55, 1485
PscI	ACATGT	1 cut(s)	1071
Psp124BI	GAGCTC	4 cut(s)	716, 1068, 1088, 1389
Psp6I	CCWGG	2 cut(s)	1637, 1770
PspFI	CCCAGC	1 cut(s)	1586
PspGI	CCWGG	2 cut(s)	1637, 1770
PstI	CTGCAG	1 cut(s)	1384
PsuI	RGATCY	1 cut(s)	96
PvuI	CGATCG	1 cut(s)	1177
PvuII	CAGCTG	1 cut(s)	415
RruI	TCGCGA	1 cut(s)	140
RsaI	GTAC	9 cut(s)	53, 374, 443, 470, 767, 912, 923, 1274, 1820
RsaNI	GTAC	9 cut(s)	52, 373, 442, 469, 766, 911, 922, 1273, 1819
RseI	CAYNNNNRTG	1 cut(s)	1053
Rsr2I	CGGWCCG	2 cut(s)	851, 1170
RsrII	CGGWCCG	2 cut(s)	851, 1170
SacI	GAGCTC	4 cut(s)	716, 1068, 1088, 1389
SacII	CCGCGG	2 cut(s)	475, 850
SapI	GCTCTTC	2 cut(s)	254, 1785
SaqAI	TTAA	6 cut(s)	362, 488, 534, 750, 903, 1356
Sau3AI	GATC	6 cut(s)	96, 1174, 1191, 1210, 1440, 1446
SchI	GAGTC	2 cut(s)	536, 850
ScrFI	CCNGG	6 cut(s)	389, 673, 926, 1639, 1742, 1772
SduI	GDGCHC	8 cut(s)	119, 716, 1068, 1088, 1122, 1389, 1516, 1748
SfaNI	GCATC	8 cut(s)	132, 441, 577, 650, 926, 1045, 1533, 1573
SfcI	CTRYAG	1 cut(s)	1380
SfoI	GGCGCC	2 cut(s)	951, 1183
Sfr303I	CCGCGG	2 cut(s)	475, 850
SgrAI	CRCCGGYG	1 cut(s)	1417
SgrBI	CCGCGG	2 cut(s)	475, 850
SinI	GGWCC	6 cut(s)	267, 424, 815, 851, 1137, 1170
SmiMI	CAYNNNNRTG	1 cut(s)	1053
SmlI	CTYRAG	1 cut(s)	1785
SmoI	CTYRAG	1 cut(s)	1785
Sse9I	AATT	6 cut(s)	871, 883, 941, 975, 1141, 1566
SspDI	GGCGCC	2 cut(s)	949, 1181
SspMI	CTAG	1 cut(s)	293
SstI	GAGCTC	4 cut(s)	716, 1068, 1088, 1389
StyD4I	CCNGG	6 cut(s)	387, 671, 924, 1637, 1740, 1770
StyI	CCWWGG	2 cut(s)	1185, 1812
TaaI	ACNGT	4 cut(s)	901, 910, 1170, 1578
TaiI	ACGT	7 cut(s)	30, 57, 552, 621, 627, 1487, 1889
TaqI	TCGA	5 cut(s)	465, 540, 561, 644, 876
TasI	AATT	6 cut(s)	871, 883, 941, 975, 1141, 1566
TatI	WGTACW	2 cut(s)	765, 1818
TauI	GCSGC	7 cut(s)	49, 221, 518, 893, 997, 1417, 1721
TfiI	GAWTC	5 cut(s)	352, 392, 934, 1094, 1160
Tru1I	TTAA	6 cut(s)	362, 488, 534, 750, 903, 1356
Tru9I	TTAA	6 cut(s)	362, 488, 534, 750, 903, 1356
TscAI	CASTG	6 cut(s)	119, 434, 1120, 1384, 1702, 1852
TspDTI	ATGAA	4 cut(s)	215, 773, 1612, 1817
TspGWI	ACGGA	2 cut(s)	70, 621
TspRI	CASTG	6 cut(s)	119, 434, 1120, 1384, 1702, 1852
VpaK11BI	GGWCC	6 cut(s)	267, 424, 815, 851, 1137, 1170
XapI	RAATTY	1 cut(s)	941
XceI	RCATGY	3 cut(s)	1075, 1538, 1653
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1130
XmiI	GTMKAC	1 cut(s)	1893
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	1 cut(s)	293
ZraI	GACGTC	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.