RLG00000006103

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0002177
Physical Location & Seq
Forward (+)
4378910 .. 4383235
4326 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006103

Sequence Viewer

Length: 1986 bp
ATGATTTCCTGGAACGACCTGTACAAGGTCTTGACGGCGGTGGTGCCTCTCTACGTGGCCATGATCTTAGCCTACGGCTCCGTCCGGTGGTGGAAGATCTTCTCCCCGGACCAATGCTCCGGAATCAACCGCTTCGTCGCAATCTTCGCAGTTCCTCTTCTCTCCTTCCACTTCATCTCCACCAACGACCCTTACACCATGAACTTCCGCTTCATCGCCGCCGACACTCTCCAGAAGATCATCATGCTCTTCGCCCTGGCCCTCTGGACCAACTTCACCCGAAACGGAAGCCTCGAGTGGATGATCACGATTTTCTCGCTCTCCACGCTTCCCAATACTCTAGTCATGGGAATCCCGCTGCTGATCGCCATGTACGGCCACCGAATCCCGGAGTCCGGCAGCCTGATGGTCCAGGTCGTCGTGCTCCAGTGCATCATTTGGTACACTCTGTTACTCTTCCTCTTCGAGTACCGCGGCGCCAAGCTGCTGATAATGGAGCAGTTCCCGGAGACCGCCGCCTCCATCGTCTCCTTCAAGGTCGACTCCGACGTCATGTCCCTCGACGGCCGCGACTTCCTCGAAACCGACGCCGAGATCGGCGACGACGGCAAGCTCCACGTCAAGGTGAGGAAGTCCAACGCGTCGAGAAGGTCGCTCTCGGCAATGACGCCTCGGCCGTCCAACCTCACCGGAGCCGAGATTTACAGCCTCAGCTCTTCCCGGAATCCCACTCCCCGAGGCTCCAATTTCAACCCCTCCGATTTTTACTCCATGATGGGAGTCCAGGGCTTCAATACCCGCCACTCCAATTTCGGACCCGCCGACTTGTACTCGGTTCAGTCCTCCCGAGGTCCGACTCCCAGACCCTCCAATTTCGAAGAGAATTCTGCTCCAATGGCGCAGACGGTTACTTCTCCCCGGTTCGGGTTTTACCCGGCCCAAACTGTCCCCTCGTCGTACCCGGCTCCGAATCCGGAATTCTCCGCCCCCGTCACTAAAACAACCTCCAAAAACAACCAACAGCAACAGCAACCGCAACCGCCGCCGCAGCAGGTTAACTCCAACAGTGGCAAAGCGAATCACGACGCGAAAGAGCTCCACATGTTTGTTTGGAGCTCCAGCAATTCCCCTGTTTCCGAAGGCGGAGGGCTCCACGTCTTCGGCGGACCTGACTTCGCCGCGTCGGAGCAATCGGGGCGGTCCGATCAGGGCGCCAAGGAGATCAGGATGTTGGTTGCTGATCACCCCCAGAATGGAGAAACCAAAGTGGCGGTTGCGGAGAGTGACGGCGATCACTACCACCACGGCGGAGAAGCCTTCACGTTCACCGGAAAGGTTGATCAGGGAGAGGAGGAGAGAGAAAAGGAGGGGCCAACCGGACTTAACAAGCAGGGGTCAAGCTCCACTGCCGAGCTACACGGGAAAGGTGGAGGAGGAGGAGGAGTGGGGGTTGATCACGAGTCAAGCGGCGGAAAACAAATGCCTCCGGCGAGCGTTATGACGCGTCTGATCTTGATCATGGTTTGGCGGAAGCTTATCCGCAATCCCAACACGTACTCTAGCCTCATCGGTCTCATCTGGTCGCTCATCGCTTTCCGGTGGGACGTTGCTATGCCAAAAATAATAGAGAAGTCGATCTCCATACTGTCCGATGCTGGACTAGGAATGGCTATGTTCAGTTTAGGTCTTTTTATGGCACTTCAACCTAAGATAATAGCATGTGGAAACTCGGTGGCCGGGTTTGCAATGGCCGTGAGATTCCTCACTGGCCCGGCTGTGATGGCTGCAGCCTCCATTGCTGTTGGGCTGCGTGGCACCCTCCTCCACTTAGCTATTGTCCAGGCTGCACTTCCTCAAGGAATTGTTCCCTTTGTCTTTGCCAAGGAGTACAATGTTCATCCATCCATTCTTAGCACTGCGGTTATATTCGGGATGTTGATAGCATTACCGATTACGCTGGTTTACTATATCGTTCTCGGACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009921 GO:0009926 GO:0009942 GO:0009958 GO:0009966 GO:0009986 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0012506 GO:0015562 GO:0016020 GO:0016043 GO:0016049 GO:0016328 GO:0021700 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098796 GO:0098797 GO:0099402 GO:1905392
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

662

Amino Acids

71.91

Weight (kDa)

7.27

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 10 - 656 6.9e-128 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 548
AatII GACGTC 1 cut(s) 552
Acc36I ACCTGC 1 cut(s) 1042
AccB1I GGYRCC 4 cut(s) 43, 476, 1211, 1814
AccI GTMKAC 1 cut(s) 540
AccII CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
AccIII TCCGGA 2 cut(s) 119, 973
AcoI YGGCCR 6 cut(s) 57, 376, 565, 674, 1734, 1749
AcsI RAATTY 2 cut(s) 883, 977
AcyI GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
AfaI GTAC 8 cut(s) 23, 374, 443, 470, 830, 959, 1556, 1889
AfiI CCNNNNNNNGG 8 cut(s) 25, 87, 388, 395, 622, 923, 924, 1253
AflIII ACRYGT 4 cut(s) 639, 1101, 1502, 1551
AgsI TTSAA 4 cut(s) 535, 751, 793, 1703
AhdI GACNNNNNGTC 1 cut(s) 553
AjiI CACGTC 2 cut(s) 619, 1156
AjnI CCWGG 5 cut(s) 8, 255, 411, 783, 1839
AluBI AGCT 9 cut(s) 484, 613, 714, 1096, 1116, 1401, 1414, 1534, 1832
AluI AGCT 9 cut(s) 484, 613, 714, 1096, 1116, 1401, 1414, 1534, 1832
Alw21I GWGCWC 3 cut(s) 426, 1098, 1118
Alw26I GTCTC 3 cut(s) 503, 532, 1577
Ama87I CYCGRG 3 cut(s) 293, 735, 846
Aor13HI TCCGGA 2 cut(s) 119, 973
ApeKI GCWGC 8 cut(s) 358, 399, 484, 1048, 1784, 1787, 1807, 1844
ApoI RAATTY 2 cut(s) 883, 977
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 3 cut(s) 479, 901, 1214
AsuC2I CCSGG 9 cut(s) 107, 389, 506, 721, 919, 935, 962, 1738, 1772
AsuHPI GGTGA 5 cut(s) 268, 637, 679, 1235, 1318
AsuII TTCGAA 1 cut(s) 876
AvaI CYCGRG 3 cut(s) 293, 735, 846
AvaII GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1166, 1200
BalI TGGCCA 1 cut(s) 59
BanI GGYRCC 4 cut(s) 43, 476, 1211, 1814
BanII GRGCYC 3 cut(s) 1098, 1118, 1152
BauI CACGAG 1 cut(s) 1457
BbsI GAAGAC 1 cut(s) 1150
Bbv12I GWGCWC 3 cut(s) 426, 1098, 1118
BbvCI CCTCAGC 1 cut(s) 710
BbvI GCAGC 8 cut(s) 345, 411, 471, 1060, 1771, 1794, 1799, 1831
BccI CCATC 5 cut(s) 400, 530, 769, 1774, 1909
BceAI ACGGC 9 cut(s) 51, 91, 391, 580, 622, 661, 1303, 1321, 1736
BciT130I CCWGG 5 cut(s) 10, 257, 413, 785, 1841
BclI TGATCA 5 cut(s) 303, 1240, 1339, 1453, 1515
BcnI CCSGG 9 cut(s) 107, 389, 506, 721, 919, 935, 962, 1738, 1772
BcoDI GTCTC 3 cut(s) 503, 532, 1577
BfaI CTAG 3 cut(s) 341, 1560, 1661
BfmI CTRYAG 1 cut(s) 1785
BfoI RGCGCY 2 cut(s) 480, 1215
BfuAI ACCTGC 1 cut(s) 1042
BglII AGATCT 1 cut(s) 96
Bme18I GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1166, 1200
BmeRI GACNNNNNGTC 1 cut(s) 553
BmeT110I CYCGRG 3 cut(s) 293, 735, 846
BmgBI CACGTC 2 cut(s) 619, 1156
BmsI GCATC 2 cut(s) 441, 1642
BpiI GAAGAC 1 cut(s) 1150
BpmI CTGGAG 3 cut(s) 215, 410, 1102
Bpu10I CCTNAGC 1 cut(s) 710
Bpu14I TTCGAA 1 cut(s) 876
BpuEI CTTGAG 1 cut(s) 1839
BpuMI CCSGG 9 cut(s) 107, 389, 506, 721, 919, 935, 962, 1738, 1772
BsaAI YACGTR 2 cut(s) 55, 1554
BsaBI GATNNNNATC 1 cut(s) 1514
BsaHI GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
BsaI GGTCTC 2 cut(s) 503, 1577
BsaWI WCCGGW 7 cut(s) 84, 119, 689, 973, 1328, 1376, 1596
BsaXI ACNNNNNCTCC 8 cut(s) 101, 131, 161, 191, 1428, 1434, 1458, 1464
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 87, 388, 395, 622, 923, 924, 1253
Bse1I ACTGG 2 cut(s) 427, 1771
Bse3DI GCAATG 3 cut(s) 669, 1752, 1794
Bse8I GATNNNNATC 1 cut(s) 1514
BseAI TCCGGA 2 cut(s) 119, 973
BseBI CCWGG 5 cut(s) 10, 257, 413, 785, 1841
BseGI GGATG 5 cut(s) 306, 1233, 1897, 1901, 1938
BseJI GATNNNNATC 1 cut(s) 1514
BseLI CCNNNNNNNGG 8 cut(s) 25, 87, 388, 395, 622, 923, 924, 1253
BseMI GCAATG 3 cut(s) 669, 1752, 1794
BseMII CTCAG 1 cut(s) 724
BseNI ACTGG 2 cut(s) 427, 1771
BseRI GAGGAG 7 cut(s) 1364, 1367, 1446, 1449, 1452, 1455, 1811
BseX3I CGGCCG 2 cut(s) 565, 674
BseXI GCAGC 8 cut(s) 345, 411, 471, 1060, 1771, 1794, 1799, 1831
BsgI GTGCAG 1 cut(s) 1830
Bsh1236I CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
Bsh1285I CGRYCG 2 cut(s) 568, 677
BshNI GGYRCC 4 cut(s) 43, 476, 1211, 1814
BsiEI CGRYCG 2 cut(s) 568, 677
BsiHKAI GWGCWC 3 cut(s) 426, 1098, 1118
BsiHKCI CYCGRG 3 cut(s) 293, 735, 846
BslFI GGGAC 3 cut(s) 541, 932, 1616
BslI CCNNNNNNNGG 8 cut(s) 25, 87, 388, 395, 622, 923, 924, 1253
BsmAI GTCTC 3 cut(s) 503, 532, 1577
BsmBI CGTCTC 1 cut(s) 532
BsmFI GGGAC 3 cut(s) 541, 932, 1616
Bso31I GGTCTC 2 cut(s) 503, 1577
BsoBI CYCGRG 3 cut(s) 293, 735, 846
Bsp119I TTCGAA 1 cut(s) 876
Bsp1286I GDGCHC 4 cut(s) 426, 1098, 1118, 1152
Bsp13I TCCGGA 2 cut(s) 119, 973
Bsp1407I TGTACA 1 cut(s) 21
BspCNI CTCAG 1 cut(s) 723
BspEI TCCGGA 2 cut(s) 119, 973
BspFNI CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
BspMAI CTGCAG 1 cut(s) 1789
BspMI ACCTGC 1 cut(s) 1042
BspQI GCTCTTC 2 cut(s) 254, 721
BspT104I TTCGAA 1 cut(s) 876
BspT107I GGYRCC 4 cut(s) 43, 476, 1211, 1814
BspTNI GGTCTC 2 cut(s) 503, 1577
BsrDI GCAATG 3 cut(s) 669, 1752, 1794
BsrGI TGTACA 1 cut(s) 21
BsrI ACTGG 2 cut(s) 427, 1771
BssNI GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
BssSI CACGAG 1 cut(s) 1457
BssT1I CCWWGG 2 cut(s) 1215, 1881
Bst2BI CACGAG 1 cut(s) 1457
Bst2UI CCWGG 5 cut(s) 10, 257, 413, 785, 1841
Bst4CI ACNGT 5 cut(s) 907, 946, 1067, 1647, 1983
Bst6I CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
BstACI GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
BstAUI TGTACA 1 cut(s) 21
BstBAI YACGTR 2 cut(s) 55, 1554
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 2 cut(s) 611, 1492
BstDEI CTNAG 5 cut(s) 67, 710, 1707, 1828, 1910
BstDSI CCRYGG 2 cut(s) 472, 1303
BstENI CCTNNNNNAGG 1 cut(s) 23
BstF5I GGATG 5 cut(s) 306, 1233, 1897, 1901, 1938
BstFNI CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
BstH2I RGCGCY 2 cut(s) 480, 1215
BstHHI GCGC 3 cut(s) 479, 901, 1214
BstMAI GTCTC 3 cut(s) 503, 532, 1577
BstMCI CGRYCG 2 cut(s) 568, 677
BstNI CCWGG 5 cut(s) 10, 257, 413, 785, 1841
BstNSI RCATGY 2 cut(s) 1105, 1722
BstSFI CTRYAG 1 cut(s) 1785
BstUI CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
BstV1I GCAGC 8 cut(s) 345, 411, 471, 1060, 1771, 1794, 1799, 1831
BstV2I GAAGAC 1 cut(s) 1150
BstX2I RGATCY 1 cut(s) 96
BstYI RGATCY 1 cut(s) 96
BstZI CGGCCG 2 cut(s) 565, 674
BtgI CCRYGG 2 cut(s) 472, 1303
BtgZI GCGATG 2 cut(s) 199, 1573
BtrI CACGTC 2 cut(s) 619, 1156
BtsCI GGATG 5 cut(s) 306, 1233, 1897, 1901, 1938
BtsI GCAGTG 2 cut(s) 1404, 1914
BtsIMutI CAGTG 5 cut(s) 434, 1072, 1404, 1764, 1914
BveI ACCTGC 1 cut(s) 1042
Cac8I GCNNGC 2 cut(s) 611, 1492
CfoI GCGC 3 cut(s) 479, 901, 1214
Cfr42I CCGCGG 1 cut(s) 475
CpoI CGGWCCG 1 cut(s) 1200
CseI GACGC 7 cut(s) 596, 630, 676, 1094, 1170, 1493, 1510
Csp6I GTAC 8 cut(s) 22, 373, 442, 469, 829, 958, 1555, 1888
CspI CGGWCCG 1 cut(s) 1200
CviQI GTAC 8 cut(s) 22, 373, 442, 469, 829, 958, 1555, 1888
DdeI CTNAG 5 cut(s) 67, 710, 1707, 1828, 1910
DinI GGCGCC 2 cut(s) 478, 1213
DrdI GACNNNNNNGTC 1 cut(s) 548
DriI GACNNNNNGTC 1 cut(s) 553
DseDI GACNNNNNNGTC 1 cut(s) 548
EaeI YGGCCR 6 cut(s) 57, 376, 565, 674, 1734, 1749
EagI CGGCCG 2 cut(s) 565, 674
Eam1104I CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
Eam1105I GACNNNNNGTC 1 cut(s) 553
EarI CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
EciI GGCGGA 6 cut(s) 973, 1158, 1179, 1323, 1485, 1543
Ecl136II GAGCTC 2 cut(s) 1096, 1116
EclXI CGGCCG 2 cut(s) 565, 674
Eco130I CCWWGG 2 cut(s) 1215, 1881
Eco24I GRGCYC 3 cut(s) 1098, 1118, 1152
Eco31I GGTCTC 2 cut(s) 503, 1577
Eco47I GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1166, 1200
Eco52I CGGCCG 2 cut(s) 565, 674
Eco53kI GAGCTC 2 cut(s) 1096, 1116
Eco88I CYCGRG 3 cut(s) 293, 735, 846
EcoICRI GAGCTC 2 cut(s) 1096, 1116
EcoNI CCTNNNNNAGG 1 cut(s) 23
EcoRI GAATTC 2 cut(s) 883, 977
EcoRII CCWGG 5 cut(s) 8, 255, 411, 783, 1839
EcoT14I CCWWGG 2 cut(s) 1215, 1881
EcoT38I GRGCYC 3 cut(s) 1098, 1118, 1152
EgeI GGCGCC 2 cut(s) 478, 1213
EheI GGCGCC 2 cut(s) 478, 1213
ErhI CCWWGG 2 cut(s) 1215, 1881
Esp3I CGTCTC 1 cut(s) 532
FaqI GGGAC 3 cut(s) 541, 932, 1616
FauI CCCGC 3 cut(s) 363, 806, 826
FbaI TGATCA 5 cut(s) 303, 1240, 1339, 1453, 1515
FblI GTMKAC 1 cut(s) 540
FokI GGATG 5 cut(s) 313, 1240, 1884, 1888, 1945
FriOI GRGCYC 3 cut(s) 1098, 1118, 1152
FspBI CTAG 3 cut(s) 341, 1560, 1661
GlaI GCGC 3 cut(s) 478, 900, 1213
GsuI CTGGAG 3 cut(s) 215, 410, 1102
HaeII RGCGCY 2 cut(s) 480, 1215
HgaI GACGC 7 cut(s) 596, 630, 676, 1094, 1170, 1493, 1510
HhaI GCGC 3 cut(s) 479, 901, 1214
Hin1I GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
Hin6I GCGC 3 cut(s) 477, 899, 1212
HinP1I GCGC 3 cut(s) 477, 899, 1212
HincII GTYRAC 2 cut(s) 541, 1057
HindII GTYRAC 2 cut(s) 541, 1057
HindIII AAGCTT 1 cut(s) 1532
HpaI GTTAAC 1 cut(s) 1057
HphI GGTGA 5 cut(s) 268, 637, 679, 1235, 1318
Hpy166II GTNNAC 5 cut(s) 444, 541, 1057, 1326, 1963
Hpy8I GTNNAC 5 cut(s) 444, 541, 1057, 1326, 1963
HpyAV CCTTC 5 cut(s) 175, 541, 642, 1133, 1327
HpyCH4III ACNGT 5 cut(s) 907, 946, 1067, 1647, 1983
HpyCH4IV ACGT 7 cut(s) 54, 549, 618, 1155, 1322, 1553, 1605
HpyCH4V TGCA 4 cut(s) 432, 1745, 1787, 1847
HpyF3I CTNAG 5 cut(s) 67, 710, 1707, 1828, 1910
HpySE526I ACGT 7 cut(s) 54, 549, 618, 1155, 1322, 1553, 1605
Hsp92I GRCGYC 5 cut(s) 477, 549, 588, 668, 1212
HspAI GCGC 3 cut(s) 477, 899, 1212
KasI GGCGCC 2 cut(s) 476, 1211
Kpn2I TCCGGA 2 cut(s) 119, 973
Ksp22I TGATCA 5 cut(s) 303, 1240, 1339, 1453, 1515
KspAI GTTAAC 1 cut(s) 1057
KspI CCGCGG 1 cut(s) 475
LguI GCTCTTC 2 cut(s) 254, 721
Lsp1109I GCAGC 8 cut(s) 345, 411, 471, 1060, 1771, 1794, 1799, 1831
LweI GCATC 2 cut(s) 441, 1642
MaeI CTAG 3 cut(s) 341, 1560, 1661
MaeII ACGT 7 cut(s) 54, 549, 618, 1155, 1322, 1553, 1605
MaeIII GTNAC 4 cut(s) 450, 907, 991, 1283
MflI RGATCY 1 cut(s) 96
MhlI GDGCHC 4 cut(s) 426, 1098, 1118, 1152
MlsI TGGCCA 1 cut(s) 59
MluCI AATT 7 cut(s) 745, 808, 871, 883, 977, 1123, 1860
MluI ACGCGT 2 cut(s) 639, 1502
MluNI TGGCCA 1 cut(s) 59
Mly113I GGCGCC 2 cut(s) 477, 1212
MlyI GAGTC 5 cut(s) 401, 536, 789, 850, 1469
MmeI TCCRAC 6 cut(s) 570, 660, 705, 878, 1086, 1164
Mox20I TGGCCA 1 cut(s) 59
MroI TCCGGA 2 cut(s) 119, 973
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 59
MseI TTAA 2 cut(s) 1056, 1383
Msp20I TGGCCA 1 cut(s) 59
MspA1I CMGCKG 2 cut(s) 358, 474
MvaI CCWGG 5 cut(s) 10, 257, 413, 785, 1841
MvnI CGCG 6 cut(s) 474, 570, 641, 1088, 1181, 1504
NarI GGCGCC 2 cut(s) 477, 1212
NciI CCSGG 9 cut(s) 107, 389, 506, 721, 919, 935, 962, 1738, 1772
NmeAIII GCCGAG 5 cut(s) 616, 638, 652, 721, 1435
NmuCI GTSAC 2 cut(s) 991, 1283
NspI RCATGY 2 cut(s) 1105, 1722
NspV TTCGAA 1 cut(s) 876
PaeR7I CTCGAG 1 cut(s) 293
PciI ACATGT 1 cut(s) 1101
PciSI GCTCTTC 2 cut(s) 254, 721
PcsI WCGNNNNNNNCGW 5 cut(s) 291, 546, 567, 674, 819
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 7 cut(s) 123, 351, 384, 724, 970, 1078, 1758
PfoI TCCNGGA 4 cut(s) 8, 387, 504, 719
PleI GAGTC 5 cut(s) 400, 536, 788, 850, 1468
PluTI GGCGCC 2 cut(s) 480, 1215
PpsI GAGTC 5 cut(s) 400, 536, 788, 850, 1468
Ppu21I YACGTR 2 cut(s) 55, 1554
PscI ACATGT 1 cut(s) 1101
Psp124BI GAGCTC 2 cut(s) 1098, 1118
Psp6I CCWGG 5 cut(s) 8, 255, 411, 783, 1839
PspGI CCWGG 5 cut(s) 8, 255, 411, 783, 1839
PspXI VCTCGAGB 1 cut(s) 293
PsrI GAACNNNNNNTAC 1 cut(s) 37
PstI CTGCAG 1 cut(s) 1789
PsuI RGATCY 1 cut(s) 96
RsaI GTAC 8 cut(s) 23, 374, 443, 470, 830, 959, 1556, 1889
RsaNI GTAC 8 cut(s) 22, 373, 442, 469, 829, 958, 1555, 1888
Rsr2I CGGWCCG 1 cut(s) 1200
RsrII CGGWCCG 1 cut(s) 1200
SacI GAGCTC 2 cut(s) 1098, 1118
SacII CCGCGG 1 cut(s) 475
SalI GTCGAC 1 cut(s) 539
SapI GCTCTTC 2 cut(s) 254, 721
SaqAI TTAA 2 cut(s) 1056, 1383
SchI GAGTC 5 cut(s) 401, 536, 789, 850, 1469
SduI GDGCHC 4 cut(s) 426, 1098, 1118, 1152
SfaNI GCATC 2 cut(s) 441, 1642
SfcI CTRYAG 1 cut(s) 1785
SfoI GGCGCC 2 cut(s) 478, 1213
Sfr274I CTCGAG 1 cut(s) 293
Sfr303I CCGCGG 1 cut(s) 475
SfuI TTCGAA 1 cut(s) 876
SgrBI CCGCGG 1 cut(s) 475
SinI GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1166, 1200
SlaI CTCGAG 1 cut(s) 293
SmlI CTYRAG 2 cut(s) 293, 1854
SmoI CTYRAG 2 cut(s) 293, 1854
Sse9I AATT 7 cut(s) 745, 808, 871, 883, 977, 1123, 1860
SspDI GGCGCC 2 cut(s) 476, 1211
SspMI CTAG 3 cut(s) 341, 1560, 1661
SstI GAGCTC 2 cut(s) 1098, 1118
StyI CCWWGG 2 cut(s) 1215, 1881
TaaI ACNGT 5 cut(s) 907, 946, 1067, 1647, 1983
TaiI ACGT 7 cut(s) 57, 552, 621, 1158, 1325, 1556, 1608
TaqI TCGA 8 cut(s) 294, 465, 540, 561, 579, 644, 876, 1634
TaqII GACCGA 1 cut(s) 1559
TasI AATT 7 cut(s) 745, 808, 871, 883, 977, 1123, 1860
TatI WGTACW 3 cut(s) 21, 828, 1887
TauI GCSGC 8 cut(s) 221, 477, 518, 570, 1045, 1048, 1181, 1470
TfiI GAWTC 7 cut(s) 123, 351, 384, 724, 970, 1078, 1758
Tru1I TTAA 2 cut(s) 1056, 1383
Tru9I TTAA 2 cut(s) 1056, 1383
TscAI CASTG 5 cut(s) 434, 1072, 1411, 1771, 1921
TseFI GTSAC 2 cut(s) 991, 1283
TseI GCWGC 8 cut(s) 358, 399, 484, 1048, 1784, 1787, 1807, 1844
Tsp45I GTSAC 2 cut(s) 991, 1283
TspDTI ATGAA 4 cut(s) 163, 202, 215, 1886
TspGWI ACGGA 2 cut(s) 70, 300
TspRI CASTG 5 cut(s) 434, 1072, 1411, 1771, 1921
VpaK11BI GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1166, 1200
XagI CCTNNNNNAGG 1 cut(s) 23
XapI RAATTY 2 cut(s) 883, 977
XceI RCATGY 2 cut(s) 1105, 1722
XhoI CTCGAG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 3 cut(s) 341, 1560, 1661
ZraI GACGTC 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.