Rh4BG398300

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0002177
Physical Location & Seq
Reverse (-)
54916716 .. 54920736
4021 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG398300.1

Sequence Viewer

Length: 1977 bp
ATGATTTCCTGGAACGACCTCTACAAGGTCTTGACGGCGGTGGTGCCTCTCTACGTGGCCATGATCTTAGCCTACGGCTCCGTCCGGTGGTGGAAGATCTTCTCCCCGGACCAATGCTCCGGCATCAACCGCTTCGTCGCAATCTTCGCAGTTCCTCTTCTCTCCTTCAAGTTCATCTCCACCAACAACCCTTACACCATGAACTTCCGCTTCATCGCCGCCGACACTCTCCAGAAGATCATCATGCTCTTCGCCCTGGCCCTCTGGACCAACTTCACCCGAAACGGAAGCCTCGAGTGGATGATCACGATTTTCTCGCTCTCCACGCTTCCCAATACTCTGGTCATGGGAATCCCGCTGCTGATCGCCATGTACGGCCACCGAATCCCCGAGTCCGGCAGCCTGATGGTCCAGGTCGTCGTGCTCCAGTGCATCATTTGGTACACTCTGTTACTCTTCCTCTTCGAGTACCGCGGCGCCAAGCTGCTGATAATGGAGCAGTTCCCGGAGACCGCCGCCTCCATCGTCTCCTTCAAGGTCGACTCCGACGTCATGTCCCTCGACGGCCGCGACTTCCTCGAAACCGACGCCGAGATCGGCGACGACGGCAAGCTCCACGTCAAGGTGAGGAAGTCCAACGCGTCCAGACGGTCGCTCTCGGCAATGACTCCTCGGCCGTCCAACCTCACCGGAGCCGAGATTTACAGCCTCAGCTCTTCCCGGAATCCCACTCCCCGAGGCTCCAATTTCAACCCCTCCGATTTTTACTCCATGATGGGAGTCCAGGGCTTCAATACCCGCCACTCCAATTTCGGACCCGCCGACTTGTACTCGGTTCAGTCCTCCCGCGGTCCGACTCCCAGACCCTCCAATTTCGAAGAGAATTCTGCTCCAATATTGGCGCAGACGGTTACTTCTCCCCGGTTCGGGTTTTACCCGGCCCAGACTGTCCCCTCGTCGTACCCGGCTCCGAATCCGGAATTCTCCGCCCCCGTCACTAAAACAACCTCCAAAAATAACCAACCGCCGCCGCAGCAGCAGCAGCAGCAGGTTAACTCCAACAGTGGCAAAGCGAATCACGACGCGAAAGAGCTCCACATGTTCGTTTGGAGCTCCAGCAATTCCCCTGTTTCCGAAGGCGGAGGGCTCCACGTTTTCGGCGGACCTGACTTCGCCGCGTCGGAGCAATCGGGGCGGTCCGATCAGGGCGCCAAGGAGATCAGGATGTTGGTTGCTGACCACCCCCAGAATGGAGAAACCAAAGTGGCGGTTGCGGAGAGTGACGGCGATCACTACCACCACGGCGGAGAAGCCTTCACGTTCACCGGAAAGGCTGATCAGGGAGAGGAGGAGAGAGAAAAGGAGGGGCCAACCGGACTTAACAAGCAGGGGTCAAGCTCCACTGCCGAGCTACACGGCGGGAAAGGTGGAGGAGTGGGGGTTGATCACGAGTCAAGCGGCGGAAAACAAATGCCTCCGGCGAGCGTTATGACGCGTCTGATCTTGATCATGGTTTGGCGGAAGCTTATCCGCAATCCCAACACGTACTCTAGCCTCATCGGTCTCATCTGGTCGCTCATCGCTGTCCGGTGGGACGTTGCTATGCCAAAAATAATAGAGAAGTCGATCTCCATACTGTCCGATGCTGGGCTAGGAATGGCTATGTTCAGTTTAGGTCTTTTTATGGCACTTCAACCTAAGATAATAGCATGTGGAAACTCGGTGGCCGGGTTTGCAATGGCCGTGAGATTCCTCACTGGCCCGGCTGTGATGGCTGCAGCCTCCATTGCTGTTGGGCTACGTGGCACCCTCCTCCACTTAGCTATTGTCCAGGCTGCGCTTCCACAAGGAATTGTTCCCTTTGTCTTTGCCAAGGAGTACAATGTTCATCCATCCATTCTTAGCACTGCGGTTATATTCGGGATGTTGATAGCATTACCGATTACGCTGGTTTACTATATCGTTCTCGGACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009921 GO:0009926 GO:0009942 GO:0009958 GO:0009966 GO:0009986 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0012506 GO:0015562 GO:0016020 GO:0016043 GO:0016049 GO:0016328 GO:0021700 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098796 GO:0098797 GO:0099402 GO:1905392
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

658

Amino Acids

71.58

Weight (kDa)

8.23

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 10 - 653 2.9e-127 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 548
AatII GACGTC 1 cut(s) 552
Acc36I ACCTGC 1 cut(s) 1039
AccB1I GGYRCC 4 cut(s) 43, 476, 1208, 1805
AccI GTMKAC 1 cut(s) 540
AccII CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
AccIII TCCGGA 1 cut(s) 976
AcoI YGGCCR 6 cut(s) 57, 376, 565, 674, 1725, 1740
AcsI RAATTY 2 cut(s) 883, 980
AcyI GRCGYC 4 cut(s) 477, 549, 588, 1209
AfaI GTAC 7 cut(s) 374, 443, 470, 830, 962, 1547, 1880
AfiI CCNNNNNNNGG 8 cut(s) 25, 87, 395, 622, 926, 927, 1250, 1647
AflIII ACRYGT 4 cut(s) 639, 1098, 1493, 1542
AgsI TTSAA 5 cut(s) 169, 535, 751, 793, 1694
AhdI GACNNNNNGTC 1 cut(s) 553
AjiI CACGTC 1 cut(s) 619
AjnI CCWGG 5 cut(s) 8, 255, 411, 783, 1830
AluBI AGCT 9 cut(s) 484, 613, 714, 1093, 1113, 1398, 1411, 1525, 1823
AluI AGCT 9 cut(s) 484, 613, 714, 1093, 1113, 1398, 1411, 1525, 1823
Alw21I GWGCWC 3 cut(s) 426, 1095, 1115
Alw26I GTCTC 3 cut(s) 503, 532, 1568
Ama87I CYCGRG 3 cut(s) 293, 389, 735
Aor13HI TCCGGA 1 cut(s) 976
ApoI RAATTY 2 cut(s) 883, 980
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 4 cut(s) 479, 904, 1211, 1840
AsuC2I CCSGG 8 cut(s) 107, 506, 721, 922, 938, 965, 1729, 1763
AsuHPI GGTGA 4 cut(s) 268, 637, 679, 1315
AsuII TTCGAA 1 cut(s) 876
AvaI CYCGRG 3 cut(s) 293, 389, 735
AvaII GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1163, 1197
BalI TGGCCA 1 cut(s) 59
BanI GGYRCC 4 cut(s) 43, 476, 1208, 1805
BanII GRGCYC 3 cut(s) 1095, 1115, 1149
BauI CACGAG 1 cut(s) 1448
Bbv12I GWGCWC 3 cut(s) 426, 1095, 1115
BbvCI CCTCAGC 1 cut(s) 710
BccI CCATC 5 cut(s) 400, 530, 769, 1765, 1900
BciT130I CCWGG 5 cut(s) 10, 257, 413, 785, 1832
BclI TGATCA 4 cut(s) 303, 1336, 1444, 1506
BcnI CCSGG 8 cut(s) 107, 506, 721, 922, 938, 965, 1729, 1763
BcoDI GTCTC 3 cut(s) 503, 532, 1568
BfaI CTAG 2 cut(s) 1551, 1652
BfmI CTRYAG 1 cut(s) 1776
BfoI RGCGCY 2 cut(s) 480, 1212
BfuAI ACCTGC 1 cut(s) 1039
BglII AGATCT 1 cut(s) 96
Bme18I GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1163, 1197
BmeRI GACNNNNNGTC 1 cut(s) 553
BmeT110I CYCGRG 3 cut(s) 293, 389, 735
BmgBI CACGTC 1 cut(s) 619
BmsI GCATC 3 cut(s) 132, 441, 1633
BpmI CTGGAG 3 cut(s) 215, 410, 1099
Bpu10I CCTNAGC 1 cut(s) 710
Bpu14I TTCGAA 1 cut(s) 876
BpuMI CCSGG 8 cut(s) 107, 506, 721, 922, 938, 965, 1729, 1763
BsaAI YACGTR 3 cut(s) 55, 1545, 1802
BsaBI GATNNNNATC 1 cut(s) 1505
BsaHI GRCGYC 4 cut(s) 477, 549, 588, 1209
BsaI GGTCTC 2 cut(s) 503, 1568
BsaWI WCCGGW 6 cut(s) 84, 689, 976, 1325, 1373, 1587
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 1425, 1455
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 87, 395, 622, 926, 927, 1250, 1647
Bse1I ACTGG 2 cut(s) 427, 1762
Bse3DI GCAATG 3 cut(s) 669, 1743, 1785
Bse8I GATNNNNATC 1 cut(s) 1505
BseAI TCCGGA 1 cut(s) 976
BseBI CCWGG 5 cut(s) 10, 257, 413, 785, 1832
BseGI GGATG 5 cut(s) 306, 1230, 1888, 1892, 1929
BseJI GATNNNNATC 1 cut(s) 1505
BseLI CCNNNNNNNGG 8 cut(s) 25, 87, 395, 622, 926, 927, 1250, 1647
BseMI GCAATG 3 cut(s) 669, 1743, 1785
BseMII CTCAG 1 cut(s) 724
BseNI ACTGG 2 cut(s) 427, 1762
BseRI GAGGAG 5 cut(s) 660, 1361, 1364, 1446, 1802
BseX3I CGGCCG 2 cut(s) 565, 674
BseYI CCCAGC 1 cut(s) 1646
Bsh1236I CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
Bsh1285I CGRYCG 3 cut(s) 568, 653, 677
BshNI GGYRCC 4 cut(s) 43, 476, 1208, 1805
BsiEI CGRYCG 3 cut(s) 568, 653, 677
BsiHKAI GWGCWC 3 cut(s) 426, 1095, 1115
BsiHKCI CYCGRG 3 cut(s) 293, 389, 735
BslFI GGGAC 3 cut(s) 541, 935, 1607
BslI CCNNNNNNNGG 8 cut(s) 25, 87, 395, 622, 926, 927, 1250, 1647
BsmAI GTCTC 3 cut(s) 503, 532, 1568
BsmBI CGTCTC 1 cut(s) 532
BsmFI GGGAC 3 cut(s) 541, 935, 1607
Bso31I GGTCTC 2 cut(s) 503, 1568
BsoBI CYCGRG 3 cut(s) 293, 389, 735
Bsp119I TTCGAA 1 cut(s) 876
Bsp1286I GDGCHC 4 cut(s) 426, 1095, 1115, 1149
Bsp13I TCCGGA 1 cut(s) 976
BspCNI CTCAG 1 cut(s) 723
BspEI TCCGGA 1 cut(s) 976
BspFNI CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
BspMAI CTGCAG 1 cut(s) 1780
BspMI ACCTGC 1 cut(s) 1039
BspQI GCTCTTC 2 cut(s) 254, 721
BspT104I TTCGAA 1 cut(s) 876
BspT107I GGYRCC 4 cut(s) 43, 476, 1208, 1805
BspTNI GGTCTC 2 cut(s) 503, 1568
BsrDI GCAATG 3 cut(s) 669, 1743, 1785
BsrI ACTGG 2 cut(s) 427, 1762
BssNI GRCGYC 4 cut(s) 477, 549, 588, 1209
BssSI CACGAG 1 cut(s) 1448
BssT1I CCWWGG 2 cut(s) 1212, 1872
Bst2BI CACGAG 1 cut(s) 1448
Bst2UI CCWGG 5 cut(s) 10, 257, 413, 785, 1832
Bst4CI ACNGT 6 cut(s) 651, 910, 949, 1064, 1638, 1974
Bst6I CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
BstACI GRCGYC 4 cut(s) 477, 549, 588, 1209
BstBAI YACGTR 3 cut(s) 55, 1545, 1802
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 2 cut(s) 611, 1483
BstDEI CTNAG 5 cut(s) 67, 710, 1698, 1819, 1901
BstDSI CCRYGG 3 cut(s) 472, 847, 1300
BstENI CCTNNNNNAGG 1 cut(s) 23
BstF5I GGATG 5 cut(s) 306, 1230, 1888, 1892, 1929
BstFNI CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
BstH2I RGCGCY 2 cut(s) 480, 1212
BstHHI GCGC 4 cut(s) 479, 904, 1211, 1840
BstMAI GTCTC 3 cut(s) 503, 532, 1568
BstMCI CGRYCG 3 cut(s) 568, 653, 677
BstNI CCWGG 5 cut(s) 10, 257, 413, 785, 1832
BstNSI RCATGY 2 cut(s) 1102, 1713
BstSFI CTRYAG 1 cut(s) 1776
BstUI CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
BstX2I RGATCY 1 cut(s) 96
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 1 cut(s) 96
BstZI CGGCCG 2 cut(s) 565, 674
BtgI CCRYGG 3 cut(s) 472, 847, 1300
BtgZI GCGATG 2 cut(s) 199, 1564
BtrI CACGTC 1 cut(s) 619
BtsCI GGATG 5 cut(s) 306, 1230, 1888, 1892, 1929
BtsI GCAGTG 2 cut(s) 1401, 1905
BtsIMutI CAGTG 5 cut(s) 434, 1069, 1401, 1755, 1905
BveI ACCTGC 1 cut(s) 1039
Cac8I GCNNGC 2 cut(s) 611, 1483
CfoI GCGC 4 cut(s) 479, 904, 1211, 1840
Cfr42I CCGCGG 2 cut(s) 475, 850
CpoI CGGWCCG 2 cut(s) 851, 1197
CseI GACGC 6 cut(s) 596, 630, 1091, 1167, 1484, 1501
Csp6I GTAC 7 cut(s) 373, 442, 469, 829, 961, 1546, 1879
CspI CGGWCCG 2 cut(s) 851, 1197
CviQI GTAC 7 cut(s) 373, 442, 469, 829, 961, 1546, 1879
DdeI CTNAG 5 cut(s) 67, 710, 1698, 1819, 1901
DinI GGCGCC 2 cut(s) 478, 1210
DrdI GACNNNNNNGTC 1 cut(s) 548
DriI GACNNNNNGTC 1 cut(s) 553
DseDI GACNNNNNNGTC 1 cut(s) 548
EaeI YGGCCR 6 cut(s) 57, 376, 565, 674, 1725, 1740
EagI CGGCCG 2 cut(s) 565, 674
Eam1104I CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
Eam1105I GACNNNNNGTC 1 cut(s) 553
EarI CTCTTC 6 cut(s) 162, 254, 461, 467, 721, 873
EciI GGCGGA 6 cut(s) 976, 1155, 1176, 1320, 1476, 1534
Ecl136II GAGCTC 2 cut(s) 1093, 1113
EclXI CGGCCG 2 cut(s) 565, 674
Eco130I CCWWGG 2 cut(s) 1212, 1872
Eco24I GRGCYC 3 cut(s) 1095, 1115, 1149
Eco31I GGTCTC 2 cut(s) 503, 1568
Eco47I GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1163, 1197
Eco52I CGGCCG 2 cut(s) 565, 674
Eco53kI GAGCTC 2 cut(s) 1093, 1113
Eco88I CYCGRG 3 cut(s) 293, 389, 735
EcoICRI GAGCTC 2 cut(s) 1093, 1113
EcoNI CCTNNNNNAGG 1 cut(s) 23
EcoRI GAATTC 2 cut(s) 883, 980
EcoRII CCWGG 5 cut(s) 8, 255, 411, 783, 1830
EcoT14I CCWWGG 2 cut(s) 1212, 1872
EcoT38I GRGCYC 3 cut(s) 1095, 1115, 1149
EgeI GGCGCC 2 cut(s) 478, 1210
EheI GGCGCC 2 cut(s) 478, 1210
ErhI CCWWGG 2 cut(s) 1212, 1872
Esp3I CGTCTC 1 cut(s) 532
FaqI GGGAC 3 cut(s) 541, 935, 1607
FauI CCCGC 5 cut(s) 363, 806, 826, 854, 1412
FbaI TGATCA 4 cut(s) 303, 1336, 1444, 1506
FblI GTMKAC 1 cut(s) 540
FokI GGATG 5 cut(s) 313, 1237, 1875, 1879, 1936
FriOI GRGCYC 3 cut(s) 1095, 1115, 1149
FspBI CTAG 2 cut(s) 1551, 1652
GlaI GCGC 4 cut(s) 478, 903, 1210, 1839
GsaI CCCAGC 1 cut(s) 1650
GsuI CTGGAG 3 cut(s) 215, 410, 1099
HaeII RGCGCY 2 cut(s) 480, 1212
HgaI GACGC 6 cut(s) 596, 630, 1091, 1167, 1484, 1501
HhaI GCGC 4 cut(s) 479, 904, 1211, 1840
Hin1I GRCGYC 4 cut(s) 477, 549, 588, 1209
Hin6I GCGC 4 cut(s) 477, 902, 1209, 1838
HinP1I GCGC 4 cut(s) 477, 902, 1209, 1838
HincII GTYRAC 2 cut(s) 541, 1054
HindII GTYRAC 2 cut(s) 541, 1054
HindIII AAGCTT 1 cut(s) 1523
HpaI GTTAAC 1 cut(s) 1054
HphI GGTGA 4 cut(s) 268, 637, 679, 1315
Hpy166II GTNNAC 5 cut(s) 444, 541, 1054, 1323, 1954
Hpy8I GTNNAC 5 cut(s) 444, 541, 1054, 1323, 1954
HpyAV CCTTC 4 cut(s) 175, 541, 1130, 1324
HpyCH4III ACNGT 6 cut(s) 651, 910, 949, 1064, 1638, 1974
HpyCH4IV ACGT 8 cut(s) 54, 549, 618, 1152, 1319, 1544, 1596, 1801
HpyCH4V TGCA 3 cut(s) 432, 1736, 1778
HpyF3I CTNAG 5 cut(s) 67, 710, 1698, 1819, 1901
HpySE526I ACGT 8 cut(s) 54, 549, 618, 1152, 1319, 1544, 1596, 1801
Hsp92I GRCGYC 4 cut(s) 477, 549, 588, 1209
HspAI GCGC 4 cut(s) 477, 902, 1209, 1838
KasI GGCGCC 2 cut(s) 476, 1208
Kpn2I TCCGGA 1 cut(s) 976
Ksp22I TGATCA 4 cut(s) 303, 1336, 1444, 1506
KspAI GTTAAC 1 cut(s) 1054
KspI CCGCGG 2 cut(s) 475, 850
LguI GCTCTTC 2 cut(s) 254, 721
LweI GCATC 3 cut(s) 132, 441, 1633
MaeI CTAG 2 cut(s) 1551, 1652
MaeII ACGT 8 cut(s) 54, 549, 618, 1152, 1319, 1544, 1596, 1801
MaeIII GTNAC 4 cut(s) 450, 910, 994, 1280
MflI RGATCY 1 cut(s) 96
MhlI GDGCHC 4 cut(s) 426, 1095, 1115, 1149
MlsI TGGCCA 1 cut(s) 59
MluCI AATT 7 cut(s) 745, 808, 871, 883, 980, 1120, 1851
MluI ACGCGT 2 cut(s) 639, 1493
MluNI TGGCCA 1 cut(s) 59
Mly113I GGCGCC 2 cut(s) 477, 1209
MlyI GAGTC 6 cut(s) 401, 536, 661, 789, 850, 1460
MmeI TCCRAC 6 cut(s) 570, 660, 705, 878, 1083, 1161
Mox20I TGGCCA 1 cut(s) 59
MroI TCCGGA 1 cut(s) 976
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 59
MseI TTAA 2 cut(s) 1053, 1380
Msp20I TGGCCA 1 cut(s) 59
MspA1I CMGCKG 3 cut(s) 358, 474, 849
MvaI CCWGG 5 cut(s) 10, 257, 413, 785, 1832
MvnI CGCG 7 cut(s) 474, 570, 641, 849, 1085, 1178, 1495
NarI GGCGCC 2 cut(s) 477, 1209
NciI CCSGG 8 cut(s) 107, 506, 721, 922, 938, 965, 1729, 1763
NmeAIII GCCGAG 5 cut(s) 616, 638, 652, 721, 1432
NmuCI GTSAC 2 cut(s) 994, 1280
NspI RCATGY 2 cut(s) 1102, 1713
NspV TTCGAA 1 cut(s) 876
PaeR7I CTCGAG 1 cut(s) 293
PciI ACATGT 1 cut(s) 1098
PciSI GCTCTTC 2 cut(s) 254, 721
PcsI WCGNNNNNNNCGW 4 cut(s) 291, 546, 567, 819
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 6 cut(s) 351, 384, 724, 973, 1075, 1749
PfoI TCCNGGA 3 cut(s) 8, 504, 719
PleI GAGTC 6 cut(s) 400, 536, 661, 788, 850, 1459
PluTI GGCGCC 2 cut(s) 480, 1212
PpsI GAGTC 6 cut(s) 400, 536, 661, 788, 850, 1459
Ppu21I YACGTR 3 cut(s) 55, 1545, 1802
PscI ACATGT 1 cut(s) 1098
Psp124BI GAGCTC 2 cut(s) 1095, 1115
Psp6I CCWGG 5 cut(s) 8, 255, 411, 783, 1830
PspFI CCCAGC 1 cut(s) 1646
PspGI CCWGG 5 cut(s) 8, 255, 411, 783, 1830
PspXI VCTCGAGB 1 cut(s) 293
PsrI GAACNNNNNNTAC 1 cut(s) 37
PstI CTGCAG 1 cut(s) 1780
PsuI RGATCY 1 cut(s) 96
RsaI GTAC 7 cut(s) 374, 443, 470, 830, 962, 1547, 1880
RsaNI GTAC 7 cut(s) 373, 442, 469, 829, 961, 1546, 1879
Rsr2I CGGWCCG 2 cut(s) 851, 1197
RsrII CGGWCCG 2 cut(s) 851, 1197
SacI GAGCTC 2 cut(s) 1095, 1115
SacII CCGCGG 2 cut(s) 475, 850
SalI GTCGAC 1 cut(s) 539
SapI GCTCTTC 2 cut(s) 254, 721
SaqAI TTAA 2 cut(s) 1053, 1380
SchI GAGTC 6 cut(s) 401, 536, 661, 789, 850, 1460
SduI GDGCHC 4 cut(s) 426, 1095, 1115, 1149
SfaNI GCATC 3 cut(s) 132, 441, 1633
SfcI CTRYAG 1 cut(s) 1776
SfoI GGCGCC 2 cut(s) 478, 1210
Sfr274I CTCGAG 1 cut(s) 293
Sfr303I CCGCGG 2 cut(s) 475, 850
SfuI TTCGAA 1 cut(s) 876
SgrBI CCGCGG 2 cut(s) 475, 850
SinI GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1163, 1197
SlaI CTCGAG 1 cut(s) 293
SmlI CTYRAG 1 cut(s) 293
SmoI CTYRAG 1 cut(s) 293
Sse9I AATT 7 cut(s) 745, 808, 871, 883, 980, 1120, 1851
SspDI GGCGCC 2 cut(s) 476, 1208
SspI AATATT 1 cut(s) 897
SspMI CTAG 2 cut(s) 1551, 1652
SstI GAGCTC 2 cut(s) 1095, 1115
StyI CCWWGG 2 cut(s) 1212, 1872
TaaI ACNGT 6 cut(s) 651, 910, 949, 1064, 1638, 1974
TaiI ACGT 8 cut(s) 57, 552, 621, 1155, 1322, 1547, 1599, 1804
TaqI TCGA 7 cut(s) 294, 465, 540, 561, 579, 876, 1625
TaqII GACCGA 1 cut(s) 1550
TasI AATT 7 cut(s) 745, 808, 871, 883, 980, 1120, 1851
TatI WGTACW 2 cut(s) 828, 1878
TauI GCSGC 8 cut(s) 221, 477, 518, 570, 1030, 1033, 1178, 1461
TfiI GAWTC 6 cut(s) 351, 384, 724, 973, 1075, 1749
Tru1I TTAA 2 cut(s) 1053, 1380
Tru9I TTAA 2 cut(s) 1053, 1380
TscAI CASTG 5 cut(s) 434, 1069, 1408, 1762, 1912
TseFI GTSAC 2 cut(s) 994, 1280
Tsp45I GTSAC 2 cut(s) 994, 1280
TspDTI ATGAA 4 cut(s) 163, 202, 215, 1877
TspGWI ACGGA 2 cut(s) 70, 300
TspRI CASTG 5 cut(s) 434, 1069, 1408, 1762, 1912
VpaK11BI GGWCC 7 cut(s) 109, 267, 409, 815, 851, 1163, 1197
XagI CCTNNNNNAGG 1 cut(s) 23
XapI RAATTY 2 cut(s) 883, 980
XceI RCATGY 2 cut(s) 1102, 1713
XcmI CCANNNNNNNNNTGG 1 cut(s) 1247
XhoI CTCGAG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 2 cut(s) 1551, 1652
ZraI GACGTC 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.