Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012909.1

Orthogroup ID

OG0002177

Physical Location & Seq

Genomic Coordinates Forward (+)

40785 .. 43558

Gene Structure 2774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012909.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

atgggaatcccgctgctgatcgccatgtacggccaccgaatcccggagtccggcagcctcatggtccaggtcgtcgtgctccagtgcatcatctggtacactctgttactcttcctcttcgagtaccgcggcgccaagctgctgataatggagcagttcccggagaccgccgcctccatcgtctccttcaaggtcgactccgacgtcatgtccctcgacggccgcgacttcctcgaaaccgacgccgagatcggcgacgacggcaagctccacgtcaaggtgaggaagtccaacgcgtccagacggtccctctccgcaatgacgcctcggccgtccaacctcaccggagccgagatttacagcctcagctcctcccggaatcccactccccgtggctccaatttcaacccctccgatttttactccatgatgggagtccagggcttcaatacccgccactccaatttcggacccgccgacttgtactcggttcagtcctcccgaggtccgactcccagaccctccaatttcgaagagaattctgctccaatggcgcagaccgttacttctccccggttcgggttttacccggcccagactgtcccctcgtcgtacccggctccgaatccggaattctccgcccccctcactaaaacgacctccaaaaataaccagccgcaaccgcaaccgcaaccccaaccgccgccgcagcaggtgaactccaacaacagtagcaaagcgaatcacgacgcgaaagagctccacatgttcgtttggagctccagcaattcccctgtttccgaaggcggcgggctccacgtcttcggcggacctgacttcgccgcgtcggagcaatcggggcggtccgatcagggcgccaaggagatcaggatgttggttgctgaccacccccagaatggagaaaccaaagtggcggttgcggagagtgacggcgatcactaccaccacggcggagaagccttcacgttcaccggaaaggttgatcagggagaggaggagagagaaaaggaggggccaaccggacttaacaagcaggggtcaagctcgactgccgagctacacgggaaaggaggagcaggagtactgggggttgatcacgagtcaagcggcggaaaacaaatgcctccggcgagcgttatgacgcgtctgatcttgatcatggtttggcggaagcttatccgcaatcccaacacgtactctagcctcatcggtctcatctggtcgctcatcgctttccggtggggtattgctatgccaaaaataatagagaagtcgatctccattctgtccgatgctgggctaggaatggctatgttcagtttaggtctttttatggcacttcaacctaagataatagcatgtggaaactcggtggccgcgtttgcaatggccgtgagattcctcactggcccggctgtgatggctgcggcctccattgctgttgggctacgtggcaccctcctccacttagctattgtccaggctgcacttcctcaaggaattgttccctttgtctttgccaaggagtacaatgttcatccatccattcttagcactgcggttatattcgggatgttgatagcattaccgattacgctggtttactatatcgttctcggactgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009921 GO:0009926 GO:0009942 GO:0009958 GO:0009966 GO:0009986 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0012506 GO:0015562 GO:0016020 GO:0016043 GO:0016049 GO:0016328 GO:0021700 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098796 GO:0098797 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

548

Amino Acids

59.0

Weight (kDa)

6.93

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23080 AT1G23080 AT1G23080 AT1G23080 AT1G70940 AT2G01420 AT2G01420 AT2G01420
fragaria_vesca	FvH4_4g32450 FvH4_4g32450 FvH4_4g32450 FvH4_6g35590
malus_domestica	MD13G1025300.v1.1 MD16G1027900.v1.1
prunus_persica	Prupe.1G324900_v2.0.a1 Prupe.1G324900_v2.0.a1
pyrus_communis	pycom13g02370 pycom13g02380 pycom16g02380
rosa_chinensis	RchiOBHm_Chr4g0441311 RchiOBHm_Chr6g0249491
rosa_laevigata	RLG00000006103 RLG00000014076 RLG00000023177
rosa_multiflora	Rmu_co8277815.1_g000001 Rmu_co8310335.1_g000001 Rmu_sc0001891.1_g000054 Rmu_sc0003778.1_g000028 Rmu_sc0010320.1_g000001 Rmu_sc0012909.1_g000005 Rmu_sc0015560.1_g000005
rosa_roxburghii	Rroxscaffold_5G00382190
rosa_rugosa	Rorug01G0483300 Rorug04G0332300
rosa_samantha	Rh3BG354500 Rh4AG384200 Rh4BG088700 Rh4BG167500 Rh4BG398300 Rh4CG413400 Rh4DG390900 Rh6AG118800
rosa_wichuraiana	Rw4G033160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	703
AasI	GACNNNNNNGTC	1 cut(s)	203
AatII	GACGTC	1 cut(s)	207
Acc36I	ACCTGC	1 cut(s)	703
AccB1I	GGYRCC	3 cut(s)	131, 875, 1475
AccI	GTMKAC	1 cut(s)	195
AccII	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
AccIII	TCCGGA	1 cut(s)	628
AcoI	YGGCCR	5 cut(s)	31, 220, 329, 1395, 1410
AcsI	RAATTY	2 cut(s)	538, 632
AcyI	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
AfaI	GTAC	8 cut(s)	29, 98, 125, 485, 614, 1104, 1217, 1550
AfiI	CCNNNNNNNGG	7 cut(s)	43, 50, 277, 578, 579, 917, 1317
AflIII	ACRYGT	4 cut(s)	294, 765, 1163, 1212
AgsI	TTSAA	4 cut(s)	190, 406, 448, 1364
AhdI	GACNNNNNGTC	1 cut(s)	208
AjiI	CACGTC	2 cut(s)	274, 820
AjnI	CCWGG	3 cut(s)	66, 438, 1500
AluBI	AGCT	9 cut(s)	139, 268, 369, 760, 780, 1065, 1078, 1195, 1493
AluI	AGCT	9 cut(s)	139, 268, 369, 760, 780, 1065, 1078, 1195, 1493
Alw21I	GWGCWC	3 cut(s)	81, 762, 782
Alw26I	GTCTC	3 cut(s)	158, 187, 1238
Ama87I	CYCGRG	1 cut(s)	501
Aor13HI	TCCGGA	1 cut(s)	628
AoxI	GGCC	9 cut(s)	31, 220, 329, 591, 1034, 1395, 1410, 1429, 1449
ApeKI	GCWGC	6 cut(s)	13, 54, 139, 709, 1445, 1505
ApoI	RAATTY	2 cut(s)	538, 632
AspLEI	GCGC	3 cut(s)	134, 556, 878
AspS9I	GGNCC	9 cut(s)	64, 306, 470, 506, 592, 830, 864, 1034, 1430
AsuC2I	CCSGG	7 cut(s)	44, 161, 376, 574, 590, 617, 1433
AsuHPI	GGTGA	4 cut(s)	292, 334, 727, 982
AsuII	TTCGAA	1 cut(s)	531
AvaI	CYCGRG	1 cut(s)	501
AvaII	GGWCC	6 cut(s)	64, 306, 470, 506, 830, 864
BanI	GGYRCC	3 cut(s)	131, 875, 1475
BanII	GRGCYC	3 cut(s)	762, 782, 816
BauI	CACGAG	1 cut(s)	1118
BbsI	GAAGAC	1 cut(s)	814
Bbv12I	GWGCWC	3 cut(s)	81, 762, 782
BbvCI	CCTCAGC	1 cut(s)	365
BbvI	GCAGC	5 cut(s)	66, 126, 721, 1432, 1492
BccI	CCATC	4 cut(s)	185, 424, 1435, 1570
BceAI	ACGGC	7 cut(s)	46, 235, 277, 316, 967, 985, 1397
BciT130I	CCWGG	3 cut(s)	68, 440, 1502
BclI	TGATCA	3 cut(s)	1003, 1114, 1176
BcnI	CCSGG	7 cut(s)	44, 161, 376, 574, 590, 617, 1433
BcoDI	GTCTC	3 cut(s)	158, 187, 1238
BfaI	CTAG	2 cut(s)	1221, 1322
BfoI	RGCGCY	2 cut(s)	135, 879
BfuAI	ACCTGC	1 cut(s)	703
BmcAI	AGTACT	1 cut(s)	1104
Bme18I	GGWCC	6 cut(s)	64, 306, 470, 506, 830, 864
BmeRI	GACNNNNNGTC	1 cut(s)	208
BmeT110I	CYCGRG	1 cut(s)	501
BmgBI	CACGTC	2 cut(s)	274, 820
BmgT120I	GGNCC	9 cut(s)	64, 306, 470, 506, 592, 830, 864, 1034, 1430
BmrI	ACTGGG	1 cut(s)	1115
BmsI	GCATC	2 cut(s)	96, 1303
BmuI	ACTGGG	1 cut(s)	1115
BpiI	GAAGAC	1 cut(s)	814
BpmI	CTGGAG	2 cut(s)	65, 766
Bpu10I	CCTNAGC	1 cut(s)	365
Bpu14I	TTCGAA	1 cut(s)	531
BpuEI	CTTGAG	1 cut(s)	1500
BpuMI	CCSGG	7 cut(s)	44, 161, 376, 574, 590, 617, 1433
BsaAI	YACGTR	2 cut(s)	1215, 1472
BsaBI	GATNNNNATC	1 cut(s)	1175
BsaHI	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
BsaI	GGTCTC	2 cut(s)	158, 1238
BsaJI	CCNNGG	9 cut(s)	127, 326, 391, 439, 502, 572, 879, 967, 1542
BsaWI	WCCGGW	5 cut(s)	344, 628, 992, 1040, 1257
BsaXI	ACNNNNNCTCC	2 cut(s)	1086, 1116
Bsc4I	CCNNNNNNNGG	7 cut(s)	43, 50, 277, 578, 579, 917, 1317
Bse1I	ACTGG	3 cut(s)	82, 1110, 1432
Bse3DI	GCAATG	3 cut(s)	324, 1413, 1455
Bse8I	GATNNNNATC	1 cut(s)	1175
BseAI	TCCGGA	1 cut(s)	628
BseBI	CCWGG	3 cut(s)	68, 440, 1502
BseDI	CCNNGG	9 cut(s)	127, 326, 391, 439, 502, 572, 879, 967, 1542
BseGI	GGATG	4 cut(s)	897, 1558, 1562, 1599
BseJI	GATNNNNATC	1 cut(s)	1175
BseLI	CCNNNNNNNGG	7 cut(s)	43, 50, 277, 578, 579, 917, 1317
BseMI	GCAATG	3 cut(s)	324, 1413, 1455
BseMII	CTCAG	1 cut(s)	379
BseNI	ACTGG	3 cut(s)	82, 1110, 1432
BseRI	GAGGAG	5 cut(s)	361, 1028, 1031, 1107, 1472
BseX3I	CGGCCG	2 cut(s)	220, 329
BseXI	GCAGC	5 cut(s)	66, 126, 721, 1432, 1492
BseYI	CCCAGC	1 cut(s)	1316
BsgI	GTGCAG	1 cut(s)	1491
Bsh1236I	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
Bsh1285I	CGRYCG	2 cut(s)	223, 332
BshFI	GGCC	9 cut(s)	33, 222, 331, 593, 1036, 1397, 1412, 1431, 1451
BshNI	GGYRCC	3 cut(s)	131, 875, 1475
BsiEI	CGRYCG	2 cut(s)	223, 332
BsiHKAI	GWGCWC	3 cut(s)	81, 762, 782
BsiHKCI	CYCGRG	1 cut(s)	501
BslFI	GGGAC	3 cut(s)	196, 292, 587
BslI	CCNNNNNNNGG	7 cut(s)	43, 50, 277, 578, 579, 917, 1317
BsmAI	GTCTC	3 cut(s)	158, 187, 1238
BsmBI	CGTCTC	1 cut(s)	187
BsmFI	GGGAC	3 cut(s)	196, 292, 587
BsnI	GGCC	9 cut(s)	33, 222, 331, 593, 1036, 1397, 1412, 1431, 1451
Bso31I	GGTCTC	2 cut(s)	158, 1238
BsoBI	CYCGRG	1 cut(s)	501
Bsp119I	TTCGAA	1 cut(s)	531
Bsp1286I	GDGCHC	4 cut(s)	81, 762, 782, 816
Bsp13I	TCCGGA	1 cut(s)	628
BspANI	GGCC	9 cut(s)	33, 222, 331, 593, 1036, 1397, 1412, 1431, 1451
BspCNI	CTCAG	1 cut(s)	378
BspEI	TCCGGA	1 cut(s)	628
BspFNI	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
BspMI	ACCTGC	1 cut(s)	703
BspT104I	TTCGAA	1 cut(s)	531
BspT107I	GGYRCC	3 cut(s)	131, 875, 1475
BspTNI	GGTCTC	2 cut(s)	158, 1238
BsrDI	GCAATG	3 cut(s)	324, 1413, 1455
BsrI	ACTGG	3 cut(s)	82, 1110, 1432
BssECI	CCNNGG	9 cut(s)	127, 326, 391, 439, 502, 572, 879, 967, 1542
BssNI	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
BssSI	CACGAG	1 cut(s)	1118
BssT1I	CCWWGG	2 cut(s)	879, 1542
Bst2BI	CACGAG	1 cut(s)	1118
Bst2UI	CCWGG	3 cut(s)	68, 440, 1502
Bst4CI	ACNGT	5 cut(s)	306, 562, 601, 731, 1644
Bst6I	CTCTTC	3 cut(s)	116, 122, 528
BstACI	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
BstBAI	YACGTR	2 cut(s)	1215, 1472
BstBI	TTCGAA	1 cut(s)	531
BstC8I	GCNNGC	3 cut(s)	266, 812, 1153
BstDEI	CTNAG	4 cut(s)	365, 1368, 1489, 1571
BstDSI	CCRYGG	3 cut(s)	127, 391, 967
BstF5I	GGATG	4 cut(s)	897, 1558, 1562, 1599
BstFNI	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
BstH2I	RGCGCY	2 cut(s)	135, 879
BstHHI	GCGC	3 cut(s)	134, 556, 878
BstMAI	GTCTC	3 cut(s)	158, 187, 1238
BstMCI	CGRYCG	2 cut(s)	223, 332
BstMWI	GCNNNNNNNGC	8 cut(s)	261, 551, 682, 709, 859, 1403, 1442, 1457
BstNI	CCWGG	3 cut(s)	68, 440, 1502
BstNSI	RCATGY	2 cut(s)	769, 1383
BstUI	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
BstV1I	GCAGC	5 cut(s)	66, 126, 721, 1432, 1492
BstV2I	GAAGAC	1 cut(s)	814
BstZI	CGGCCG	2 cut(s)	220, 329
BsuRI	GGCC	9 cut(s)	33, 222, 331, 593, 1036, 1397, 1412, 1431, 1451
BtgI	CCRYGG	3 cut(s)	127, 391, 967
BtgZI	GCGATG	1 cut(s)	1234
BtrI	CACGTC	2 cut(s)	274, 820
BtsCI	GGATG	4 cut(s)	897, 1558, 1562, 1599
BtsI	GCAGTG	1 cut(s)	1575
BtsIMutI	CAGTG	3 cut(s)	89, 1425, 1575
BveI	ACCTGC	1 cut(s)	703
Cac8I	GCNNGC	3 cut(s)	266, 812, 1153
CfoI	GCGC	3 cut(s)	134, 556, 878
Cfr13I	GGNCC	9 cut(s)	64, 306, 470, 506, 592, 830, 864, 1034, 1430
Cfr42I	CCGCGG	1 cut(s)	130
CpoI	CGGWCCG	1 cut(s)	864
CseI	GACGC	7 cut(s)	251, 285, 331, 758, 834, 1154, 1171
Csp6I	GTAC	8 cut(s)	28, 97, 124, 484, 613, 1103, 1216, 1549
CspI	CGGWCCG	1 cut(s)	864
CviAII	CATG	7 cut(s)	25, 61, 208, 427, 766, 1180, 1380
CviQI	GTAC	8 cut(s)	28, 97, 124, 484, 613, 1103, 1216, 1549
DdeI	CTNAG	4 cut(s)	365, 1368, 1489, 1571
DinI	GGCGCC	2 cut(s)	133, 877
DrdI	GACNNNNNNGTC	1 cut(s)	203
DriI	GACNNNNNGTC	1 cut(s)	208
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	5 cut(s)	31, 220, 329, 1395, 1410
EagI	CGGCCG	2 cut(s)	220, 329
Eam1104I	CTCTTC	3 cut(s)	116, 122, 528
Eam1105I	GACNNNNNGTC	1 cut(s)	208
EarI	CTCTTC	3 cut(s)	116, 122, 528
EciI	GGCGGA	5 cut(s)	628, 843, 987, 1146, 1204
Ecl136II	GAGCTC	2 cut(s)	760, 780
EclXI	CGGCCG	2 cut(s)	220, 329
Eco130I	CCWWGG	2 cut(s)	879, 1542
Eco24I	GRGCYC	3 cut(s)	762, 782, 816
Eco31I	GGTCTC	2 cut(s)	158, 1238
Eco47I	GGWCC	6 cut(s)	64, 306, 470, 506, 830, 864
Eco52I	CGGCCG	2 cut(s)	220, 329
Eco53kI	GAGCTC	2 cut(s)	760, 780
Eco88I	CYCGRG	1 cut(s)	501
EcoICRI	GAGCTC	2 cut(s)	760, 780
EcoRI	GAATTC	2 cut(s)	538, 632
EcoRII	CCWGG	3 cut(s)	66, 438, 1500
EcoT14I	CCWWGG	2 cut(s)	879, 1542
EcoT38I	GRGCYC	3 cut(s)	762, 782, 816
EgeI	GGCGCC	2 cut(s)	133, 877
EheI	GGCGCC	2 cut(s)	133, 877
ErhI	CCWWGG	2 cut(s)	879, 1542
Esp3I	CGTCTC	1 cut(s)	187
FaeI	CATG	7 cut(s)	28, 64, 211, 430, 769, 1183, 1383
FaqI	GGGAC	3 cut(s)	196, 292, 587
FatI	CATG	7 cut(s)	24, 60, 207, 426, 765, 1179, 1379
FauI	CCCGC	4 cut(s)	18, 461, 481, 803
FbaI	TGATCA	3 cut(s)	1003, 1114, 1176
FblI	GTMKAC	1 cut(s)	195
FokI	GGATG	4 cut(s)	904, 1545, 1549, 1606
FriOI	GRGCYC	3 cut(s)	762, 782, 816
FspBI	CTAG	2 cut(s)	1221, 1322
GlaI	GCGC	3 cut(s)	133, 555, 877
GsaI	CCCAGC	1 cut(s)	1320
GsuI	CTGGAG	2 cut(s)	65, 766
HaeII	RGCGCY	2 cut(s)	135, 879
HaeIII	GGCC	9 cut(s)	33, 222, 331, 593, 1036, 1397, 1412, 1431, 1451
HgaI	GACGC	7 cut(s)	251, 285, 331, 758, 834, 1154, 1171
HhaI	GCGC	3 cut(s)	134, 556, 878
Hin1I	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
Hin1II	CATG	7 cut(s)	28, 64, 211, 430, 769, 1183, 1383
Hin6I	GCGC	3 cut(s)	132, 554, 876
HinP1I	GCGC	3 cut(s)	132, 554, 876
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HindIII	AAGCTT	1 cut(s)	1193
HphI	GGTGA	4 cut(s)	292, 334, 727, 982
Hpy166II	GTNNAC	5 cut(s)	99, 196, 718, 990, 1624
Hpy188III	TCNNGA	8 cut(s)	300, 501, 629, 746, 889, 1118, 1174, 1591
Hpy8I	GTNNAC	5 cut(s)	99, 196, 718, 990, 1624
Hpy99I	CGWCG	9 cut(s)	77, 206, 221, 245, 260, 263, 613, 752, 850
HpyAV	CCTTC	3 cut(s)	196, 797, 991
HpyCH4III	ACNGT	5 cut(s)	306, 562, 601, 731, 1644
HpyCH4IV	ACGT	6 cut(s)	204, 273, 819, 986, 1214, 1471
HpyCH4V	TGCA	3 cut(s)	87, 1406, 1508
HpyF10VI	GCNNNNNNNGC	8 cut(s)	261, 551, 682, 709, 859, 1403, 1442, 1457
HpyF3I	CTNAG	4 cut(s)	365, 1368, 1489, 1571
HpySE526I	ACGT	6 cut(s)	204, 273, 819, 986, 1214, 1471
Hsp92I	GRCGYC	5 cut(s)	132, 204, 243, 323, 876
Hsp92II	CATG	7 cut(s)	28, 64, 211, 430, 769, 1183, 1383
HspAI	GCGC	3 cut(s)	132, 554, 876
KasI	GGCGCC	2 cut(s)	131, 875
Kpn2I	TCCGGA	1 cut(s)	628
Ksp22I	TGATCA	3 cut(s)	1003, 1114, 1176
KspI	CCGCGG	1 cut(s)	130
Lsp1109I	GCAGC	5 cut(s)	66, 126, 721, 1432, 1492
LweI	GCATC	2 cut(s)	96, 1303
MaeI	CTAG	2 cut(s)	1221, 1322
MaeII	ACGT	6 cut(s)	204, 273, 819, 986, 1214, 1471
MaeIII	GTNAC	3 cut(s)	105, 562, 947
MboII	GAAGA	4 cut(s)	103, 109, 545, 814
MhlI	GDGCHC	4 cut(s)	81, 762, 782, 816
MluCI	AATT	7 cut(s)	400, 463, 526, 538, 632, 787, 1521
MluI	ACGCGT	2 cut(s)	294, 1163
Mly113I	GGCGCC	2 cut(s)	132, 876
MlyI	GAGTC	5 cut(s)	56, 191, 444, 505, 1130
MmeI	TCCRAC	6 cut(s)	225, 315, 360, 533, 747, 828
MroI	TCCGGA	1 cut(s)	628
MseI	TTAA	1 cut(s)	1047
MspA1I	CMGCKG	2 cut(s)	13, 129
MvaI	CCWGG	3 cut(s)	68, 440, 1502
MvnI	CGCG	7 cut(s)	129, 225, 296, 752, 845, 1165, 1400
MwoI	GCNNNNNNNGC	8 cut(s)	261, 551, 682, 709, 859, 1403, 1442, 1457
NarI	GGCGCC	2 cut(s)	132, 876
NciI	CCSGG	7 cut(s)	44, 161, 376, 574, 590, 617, 1433
NlaIII	CATG	7 cut(s)	28, 64, 211, 430, 769, 1183, 1383
NmeAIII	GCCGAG	4 cut(s)	271, 307, 376, 1099
NmuCI	GTSAC	1 cut(s)	947
NspI	RCATGY	2 cut(s)	769, 1383
NspV	TTCGAA	1 cut(s)	531
PaqCI	CACCTGC	1 cut(s)	703
PciI	ACATGT	1 cut(s)	765
PcsI	WCGNNNNNNNCGW	5 cut(s)	201, 222, 329, 474, 1397
PfeI	GAWTC	6 cut(s)	6, 39, 379, 625, 742, 1419
PfoI	TCCNGGA	3 cut(s)	42, 159, 374
PleI	GAGTC	5 cut(s)	55, 191, 443, 505, 1129
PluTI	GGCGCC	2 cut(s)	135, 879
PpsI	GAGTC	5 cut(s)	55, 191, 443, 505, 1129
Ppu21I	YACGTR	2 cut(s)	1215, 1472
PscI	ACATGT	1 cut(s)	765
Psp124BI	GAGCTC	2 cut(s)	762, 782
Psp6I	CCWGG	3 cut(s)	66, 438, 1500
PspFI	CCCAGC	1 cut(s)	1316
PspGI	CCWGG	3 cut(s)	66, 438, 1500
PspPI	GGNCC	9 cut(s)	64, 306, 470, 506, 592, 830, 864, 1034, 1430
RsaI	GTAC	8 cut(s)	29, 98, 125, 485, 614, 1104, 1217, 1550
RsaNI	GTAC	8 cut(s)	28, 97, 124, 484, 613, 1103, 1216, 1549
Rsr2I	CGGWCCG	1 cut(s)	864
RsrII	CGGWCCG	1 cut(s)	864
SacI	GAGCTC	2 cut(s)	762, 782
SacII	CCGCGG	1 cut(s)	130
SalI	GTCGAC	1 cut(s)	194
SaqAI	TTAA	1 cut(s)	1047
Sau96I	GGNCC	9 cut(s)	64, 306, 470, 506, 592, 830, 864, 1034, 1430
ScaI	AGTACT	1 cut(s)	1104
SchI	GAGTC	5 cut(s)	56, 191, 444, 505, 1130
SduI	GDGCHC	4 cut(s)	81, 762, 782, 816
SfaNI	GCATC	2 cut(s)	96, 1303
SfoI	GGCGCC	2 cut(s)	133, 877
Sfr303I	CCGCGG	1 cut(s)	130
SfuI	TTCGAA	1 cut(s)	531
SgrBI	CCGCGG	1 cut(s)	130
SinI	GGWCC	6 cut(s)	64, 306, 470, 506, 830, 864
SmlI	CTYRAG	1 cut(s)	1515
SmoI	CTYRAG	1 cut(s)	1515
Sse9I	AATT	7 cut(s)	400, 463, 526, 538, 632, 787, 1521
SspDI	GGCGCC	2 cut(s)	131, 875
SspMI	CTAG	2 cut(s)	1221, 1322
SstI	GAGCTC	2 cut(s)	762, 782
StyI	CCWWGG	2 cut(s)	879, 1542
TaaI	ACNGT	5 cut(s)	306, 562, 601, 731, 1644
TaiI	ACGT	6 cut(s)	207, 276, 822, 989, 1217, 1474
TaqI	TCGA	7 cut(s)	120, 195, 216, 234, 531, 1067, 1295
TaqII	GACCGA	1 cut(s)	1220
TasI	AATT	7 cut(s)	400, 463, 526, 538, 632, 787, 1521
TatI	WGTACW	3 cut(s)	483, 1102, 1548
TfiI	GAWTC	6 cut(s)	6, 39, 379, 625, 742, 1419
Tru1I	TTAA	1 cut(s)	1047
Tru9I	TTAA	1 cut(s)	1047
TscAI	CASTG	3 cut(s)	89, 1432, 1582
TseFI	GTSAC	1 cut(s)	947
TseI	GCWGC	6 cut(s)	13, 54, 139, 709, 1445, 1505
Tsp45I	GTSAC	1 cut(s)	947
TspDTI	ATGAA	1 cut(s)	1547
TspRI	CASTG	3 cut(s)	89, 1432, 1582
VpaK11BI	GGWCC	6 cut(s)	64, 306, 470, 506, 830, 864
XapI	RAATTY	2 cut(s)	538, 632
XceI	RCATGY	2 cut(s)	769, 1383
XcmI	CCANNNNNNNNNTGG	1 cut(s)	914
XmiI	GTMKAC	1 cut(s)	195
XspI	CTAG	2 cut(s)	1221, 1322
ZraI	GACGTC	1 cut(s)	205
ZrmI	AGTACT	1 cut(s)	1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.