pycom16g02380

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0002177
Physical Location & Seq
Forward (+)
1520643 .. 1524189
3547 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1917 bp
ATGATTTCGTGGCACGACCTTTACAACGTGTTGACGGCGGTGGTGCCGCTGTACGTGGCGATGATATTAGCCTACGGCTCCGTCCGGTGGTGGAAGATCTTCTCCCCTGACCAGTGCTCCGGCATCAACAGCTTCGTCGCGATATTCGCTGTCCCCTTGCTCTCCTTCCACTTTATCTCCACCAACGACCCCTACACCATGAACTTCCGGTTCGTCGCCGCCGATACCCTCCAGAAAATCATCATGCTCTTCGCCCTCAGCCTATGGACCAACTTCACCCGCAACGGCAGCCTAGAGTGGCTGATTACGATTTTCTCCCTCTCCACCCTCCCCAACACTCTCGTCATGGGGATTCCGCTGTTAATCGCCATGTACGGCAAAAAAATCCCGGAATCCGGCAGCCTCATGGTGCAGCTGGTGGTGGTCCAGTGCATCATCTGGTACACTCTCCTCCTCTTCCTGTTCGAGTACCGCGGGGCCAAGCTCTTAATCATGGAGCAGTTTCCGGAGACCGCCGCCTCCATCGTCTCTTTTAAACTCGACTCCGACGTCGTTTCGCTCGACGGCAGGGATTTTTTGGAAACCGATGCCGAAATCGGTAACGACGGAAAGCTCCACGTCAACGTCCGGAAGTCCAACGCATCGAGGCGGTCGTTCTCTGAAATGACGCCCCGGCAGTCTAACCTCAGCAGCGCGGAGATTTACAGCCTGAGCTCCTCCCGAAATCCCACCCCGCGAGGCTCCAACTTTAACCCCTCCGATTTGTACTCCATGATGGGGGTTCATGGGTTCAACACGCGCCACTCCAACTTCGGACCTGCCGACTTGTATTCGGTTCAGTCCTCCCGCGGTCCGACTCCACGGCCCTCCAATTTCGAGGAGAATTGCGCGGCTCAGACCGTTAAGACGGTACCCGCATCGTACCCGGCCCCGAATCCTGAATTCTCGGCGCCGACAGCTAAAAATAGCAACACAATTCAACAGCAGCAGAAGCCGCAAGTGGCAGCGCAACCCGTTTCGGATGGTGCTGCTGCTAAAACGAATAGTCATCACGATGCTAAAGAGCTCCACATGTTCGTTTGGAGCTCCAGCGATTCCCCTGTTTCTGAAGGCAGTGGGCTCCATGTTTTTGGTGGGACCAATTTCGGTGCTGCCGAGGAATCTGGACGGTCCGATCGGGGCGCCAAGGAGATCAGAATGCTTGTTGCTGATCACCTCCAAAATGGAGAAAACAAAGTGGCAGTTCCGGAGACTGCGCCAACGGCGGAGGTGTACGGCGGGGAAGCGTTCAGCTTTGGCGGGAGGGGTGGCGAGGTAGAGGAGGCTGAAAGGGAAAAAGAGGGAACCACAGGGCTTAATAAGCTGGCGTCCAGCTCCACTGCAGAGCTCCACACAAGGGGCGGAAGGCAAATGCCGCCGGCGAGCGTTATGACCCGTCTGATCTTGATCATGGTTTGGCGGAAGCTTATCCGCAATCCCAACACGTATTCCAGCCTCATTGGTCTCATCTGGGCTCTCATCGCTTTCCGGTGGCATGTGGGGATGCCAAAAATAGTAGAAAAGTCAATTTCCATACTGTCTGATGCTGGGCTTGGAATGGCTATGTTCAGCTTAGGTCTTTTCATGGCACTTCAACCCAGGATAATAGCATGTGGGAACTCAGTTGGTGGATATGCAATGGCAGCAAGGTTCCTCACTGGCCCCGCCGTTATGGCTGCCGCCTCCATTGCTGTTGGCCTCCGGGGCACCCTCCTCCACTTAGCTATTGTCCAGGCTGCTCTTCCTCAAGGAGTTGTTCCCTTTGTCTTTGCCAAGGAGTACAATGTTCATCCAGCCATTCTTAGCACTGCGGTTATTTTCGGAATGTTGATAGCGTTACCTATTACGTTGGTCTACTATATTCTTCTGGGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009921 GO:0009926 GO:0009942 GO:0009958 GO:0009966 GO:0009986 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0012506 GO:0015562 GO:0016020 GO:0016043 GO:0016049 GO:0016328 GO:0021700 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098796 GO:0098797 GO:0099402 GO:1905392
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

639

Amino Acids

69.44

Weight (kDa)

7.74

Isoelectric Point (pI)

33.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 10 - 633 7.1e-124 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 548
AatII GACGTC 1 cut(s) 552
Acc36I ACCTGC 1 cut(s) 826
Acc65I GGTACC 1 cut(s) 910
AccB1I GGYRCC 5 cut(s) 43, 910, 949, 1181, 1745
AccI GTMKAC 1 cut(s) 1893
AccII CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
AccIII TCCGGA 3 cut(s) 505, 627, 1246
AcsI RAATTY 1 cut(s) 941
AcuI CTGAAG 1 cut(s) 1128
AcyI GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
AfaI GTAC 9 cut(s) 53, 374, 443, 470, 767, 912, 923, 1274, 1820
AfiI CCNNNNNNNGG 4 cut(s) 87, 395, 777, 1396
AflIII ACRYGT 3 cut(s) 27, 1071, 1482
AgsI TTSAA 3 cut(s) 793, 980, 1634
AjiI CACGTC 1 cut(s) 619
AjnI CCWGG 2 cut(s) 1637, 1770
Alw21I GWGCWC 5 cut(s) 119, 716, 1068, 1088, 1389
Alw26I GTCTC 4 cut(s) 503, 532, 1244, 1508
Aor13HI TCCGGA 3 cut(s) 505, 627, 1246
AoxI GGCC 5 cut(s) 477, 863, 927, 1699, 1735
ApoI RAATTY 1 cut(s) 941
Asp700I GAANNNNTTC 1 cut(s) 98
Asp718I GGTACC 1 cut(s) 910
AspLEI GCGC 7 cut(s) 695, 801, 890, 952, 1009, 1184, 1258
AsuC2I CCSGG 4 cut(s) 389, 673, 926, 1742
AsuHPI GGTGA 2 cut(s) 268, 1205
AvaII GGWCC 6 cut(s) 267, 424, 815, 851, 1137, 1170
BaeGI GKGCMC 1 cut(s) 1748
BanI GGYRCC 5 cut(s) 43, 910, 949, 1181, 1745
BanII GRGCYC 6 cut(s) 716, 1068, 1088, 1122, 1389, 1516
Bbv12I GWGCWC 5 cut(s) 119, 716, 1068, 1088, 1389
BbvCI CCTCAGC 2 cut(s) 257, 686
BccI CCATC 3 cut(s) 530, 769, 1016
BceAI ACGGC 9 cut(s) 51, 91, 301, 391, 580, 878, 1278, 1291, 1691
BciT130I CCWGG 2 cut(s) 1639, 1772
BclI TGATCA 2 cut(s) 1210, 1446
BcnI CCSGG 4 cut(s) 389, 673, 926, 1742
BcoDI GTCTC 4 cut(s) 503, 532, 1244, 1508
BfaI CTAG 1 cut(s) 293
BfmI CTRYAG 1 cut(s) 1380
BfoI RGCGCY 2 cut(s) 953, 1185
BfuAI ACCTGC 1 cut(s) 826
BglI GCCNNNNNGGC 2 cut(s) 1712, 1743
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 6 cut(s) 389, 673, 926, 1639, 1742, 1772
Bme18I GGWCC 6 cut(s) 267, 424, 815, 851, 1137, 1170
BmgBI CACGTC 1 cut(s) 619
BmrFI CCNGG 6 cut(s) 389, 673, 926, 1639, 1742, 1772
BmsI GCATC 8 cut(s) 132, 441, 577, 650, 926, 1045, 1533, 1573
BpmI CTGGAG 2 cut(s) 215, 1072
Bpu10I CCTNAGC 4 cut(s) 257, 686, 710, 1612
BpuEI CTTGAG 1 cut(s) 1770
BpuMI CCSGG 4 cut(s) 389, 673, 926, 1742
BsaAI YACGTR 2 cut(s) 55, 1485
BsaBI GATNNNNATC 1 cut(s) 1445
BsaHI GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
BsaI GGTCTC 2 cut(s) 503, 1508
BsaJI CCNNGG 9 cut(s) 472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BsaWI WCCGGW 6 cut(s) 84, 207, 505, 627, 1246, 1527
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 87, 395, 777, 1396
Bse118I RCCGGY 1 cut(s) 1417
Bse1I ACTGG 3 cut(s) 112, 427, 1702
Bse3DI GCAATG 2 cut(s) 1683, 1725
Bse8I GATNNNNATC 1 cut(s) 1445
BseAI TCCGGA 3 cut(s) 505, 627, 1246
BseBI CCWGG 2 cut(s) 1639, 1772
BseDI CCNNGG 9 cut(s) 472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BseGI GGATG 3 cut(s) 1027, 1548, 1828
BseJI GATNNNNATC 1 cut(s) 1445
BseLI CCNNNNNNNGG 4 cut(s) 87, 395, 777, 1396
BseMI GCAATG 2 cut(s) 1683, 1725
BseMII CTCAG 5 cut(s) 271, 700, 701, 908, 1674
BseNI ACTGG 3 cut(s) 112, 427, 1702
BseRI GAGGAG 6 cut(s) 440, 443, 706, 893, 1334, 1742
BseSI GKGCMC 1 cut(s) 1748
BseYI CCCAGC 1 cut(s) 1586
BsgI GTGCAG 1 cut(s) 431
Bsh1236I CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
Bsh1285I CGRYCG 2 cut(s) 653, 1177
BshFI GGCC 5 cut(s) 479, 865, 929, 1701, 1737
BshNI GGYRCC 5 cut(s) 43, 910, 949, 1181, 1745
BsiEI CGRYCG 2 cut(s) 653, 1177
BsiHKAI GWGCWC 5 cut(s) 119, 716, 1068, 1088, 1389
BslFI GGGAC 2 cut(s) 137, 1150
BslI CCNNNNNNNGG 4 cut(s) 87, 395, 777, 1396
BsmAI GTCTC 4 cut(s) 503, 532, 1244, 1508
BsmBI CGTCTC 1 cut(s) 532
BsmFI GGGAC 2 cut(s) 137, 1150
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 5 cut(s) 479, 865, 929, 1701, 1737
Bso31I GGTCTC 2 cut(s) 503, 1508
Bsp1286I GDGCHC 8 cut(s) 119, 716, 1068, 1088, 1122, 1389, 1516, 1748
Bsp13I TCCGGA 3 cut(s) 505, 627, 1246
Bsp143I GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
Bsp68I TCGCGA 1 cut(s) 140
BspANI GGCC 5 cut(s) 479, 865, 929, 1701, 1737
BspCNI CTCAG 5 cut(s) 270, 699, 702, 907, 1673
BspEI TCCGGA 3 cut(s) 505, 627, 1246
BspFNI CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
BspMAI CTGCAG 1 cut(s) 1384
BspMI ACCTGC 1 cut(s) 826
BspQI GCTCTTC 2 cut(s) 254, 1785
BspT107I GGYRCC 5 cut(s) 43, 910, 949, 1181, 1745
BspTNI GGTCTC 2 cut(s) 503, 1508
BsrDI GCAATG 2 cut(s) 1683, 1725
BsrFI RCCGGY 1 cut(s) 1417
BsrI ACTGG 3 cut(s) 112, 427, 1702
BssAI RCCGGY 1 cut(s) 1417
BssECI CCNNGG 9 cut(s) 472, 671, 847, 860, 1155, 1185, 1637, 1741, 1812
BssMI GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
BssNI GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
BssT1I CCWWGG 2 cut(s) 1185, 1812
Bst2UI CCWGG 2 cut(s) 1639, 1772
Bst4CI ACNGT 4 cut(s) 901, 910, 1170, 1578
Bst6I CTCTTC 3 cut(s) 254, 461, 1785
BstACI GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
BstBAI YACGTR 2 cut(s) 55, 1485
BstC8I GCNNGC 3 cut(s) 1365, 1419, 1423
BstDEI CTNAG 8 cut(s) 257, 686, 710, 894, 1612, 1660, 1759, 1841
BstDSI CCRYGG 3 cut(s) 472, 847, 860
BstF5I GGATG 3 cut(s) 1027, 1548, 1828
BstFNI CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
BstH2I RGCGCY 2 cut(s) 953, 1185
BstHHI GCGC 7 cut(s) 695, 801, 890, 952, 1009, 1184, 1258
BstKTI GATC 6 cut(s) 99, 1177, 1194, 1213, 1443, 1449
BstMAI GTCTC 4 cut(s) 503, 532, 1244, 1508
BstMBI GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
BstMCI CGRYCG 2 cut(s) 653, 1177
BstNI CCWGG 2 cut(s) 1639, 1772
BstNSI RCATGY 3 cut(s) 1075, 1538, 1653
BstSCI CCNGG 6 cut(s) 387, 671, 924, 1637, 1740, 1770
BstSFI CTRYAG 1 cut(s) 1380
BstSLI GKGCMC 1 cut(s) 1748
BstUI CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
BstX2I RGATCY 1 cut(s) 96
BstXI CCANNNNNNTGG 1 cut(s) 1130
BstYI RGATCY 1 cut(s) 96
BsuRI GGCC 5 cut(s) 479, 865, 929, 1701, 1737
BtgI CCRYGG 3 cut(s) 472, 847, 860
BtgZI GCGATG 2 cut(s) 74, 1504
BtrI CACGTC 1 cut(s) 619
BtsCI GGATG 3 cut(s) 1027, 1548, 1828
BtsI GCAGTG 3 cut(s) 1120, 1377, 1845
BtsIMutI CAGTG 6 cut(s) 119, 434, 1120, 1377, 1695, 1845
BtuMI TCGCGA 1 cut(s) 140
BveI ACCTGC 1 cut(s) 826
Cac8I GCNNGC 3 cut(s) 1365, 1419, 1423
CfoI GCGC 7 cut(s) 695, 801, 890, 952, 1009, 1184, 1258
Cfr10I RCCGGY 1 cut(s) 1417
Cfr42I CCGCGG 2 cut(s) 475, 850
CpoI CGGWCCG 2 cut(s) 851, 1170
CseI GACGC 2 cut(s) 676, 1356
Csp6I GTAC 9 cut(s) 52, 373, 442, 469, 766, 911, 922, 1273, 1819
CspI CGGWCCG 2 cut(s) 851, 1170
CviQI GTAC 9 cut(s) 52, 373, 442, 469, 766, 911, 922, 1273, 1819
DdeI CTNAG 8 cut(s) 257, 686, 710, 894, 1612, 1660, 1759, 1841
DinI GGCGCC 2 cut(s) 951, 1183
DpnI GATC 6 cut(s) 98, 1176, 1193, 1212, 1442, 1448
DpnII GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
DraI TTTAAA 1 cut(s) 535
DrdI GACNNNNNNGTC 1 cut(s) 548
DseDI GACNNNNNNGTC 1 cut(s) 548
Eam1104I CTCTTC 3 cut(s) 254, 461, 1785
EarI CTCTTC 3 cut(s) 254, 461, 1785
EciI GGCGGA 3 cut(s) 1280, 1416, 1474
Ecl136II GAGCTC 4 cut(s) 714, 1066, 1086, 1387
Eco130I CCWWGG 2 cut(s) 1185, 1812
Eco24I GRGCYC 6 cut(s) 716, 1068, 1088, 1122, 1389, 1516
Eco31I GGTCTC 2 cut(s) 503, 1508
Eco47I GGWCC 6 cut(s) 267, 424, 815, 851, 1137, 1170
Eco53kI GAGCTC 4 cut(s) 714, 1066, 1086, 1387
Eco57I CTGAAG 1 cut(s) 1128
EcoICRI GAGCTC 4 cut(s) 714, 1066, 1086, 1387
EcoRI GAATTC 1 cut(s) 941
EcoRII CCWGG 2 cut(s) 1637, 1770
EcoT14I CCWWGG 2 cut(s) 1185, 1812
EcoT38I GRGCYC 6 cut(s) 716, 1068, 1088, 1122, 1389, 1516
EgeI GGCGCC 2 cut(s) 951, 1183
EheI GGCGCC 2 cut(s) 951, 1183
ErhI CCWWGG 2 cut(s) 1185, 1812
Esp3I CGTCTC 1 cut(s) 532
FaqI GGGAC 2 cut(s) 137, 1150
FauI CCCGC 8 cut(s) 287, 467, 741, 854, 922, 1271, 1292, 1711
FbaI TGATCA 2 cut(s) 1210, 1446
FblI GTMKAC 1 cut(s) 1893
FokI GGATG 3 cut(s) 1034, 1555, 1815
FriOI GRGCYC 6 cut(s) 716, 1068, 1088, 1122, 1389, 1516
FspBI CTAG 1 cut(s) 293
GlaI GCGC 7 cut(s) 694, 800, 889, 951, 1008, 1183, 1257
GsaI CCCAGC 1 cut(s) 1590
GsuI CTGGAG 2 cut(s) 215, 1072
HaeII RGCGCY 2 cut(s) 953, 1185
HaeIII GGCC 5 cut(s) 479, 865, 929, 1701, 1737
HgaI GACGC 2 cut(s) 676, 1356
HhaI GCGC 7 cut(s) 695, 801, 890, 952, 1009, 1184, 1258
Hin1I GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
Hin6I GCGC 7 cut(s) 693, 799, 888, 950, 1007, 1182, 1256
HinP1I GCGC 7 cut(s) 693, 799, 888, 950, 1007, 1182, 1256
HincII GTYRAC 2 cut(s) 33, 622
HindII GTYRAC 2 cut(s) 33, 622
HindIII AAGCTT 1 cut(s) 1463
HinfI GANTC 7 cut(s) 352, 392, 542, 856, 934, 1094, 1160
HphI GGTGA 2 cut(s) 268, 1205
Hpy166II GTNNAC 5 cut(s) 33, 444, 622, 1273, 1894
Hpy8I GTNNAC 5 cut(s) 33, 444, 622, 1273, 1894
Hpy99I CGWCG 6 cut(s) 140, 218, 551, 554, 566, 608
HpyAV CCTTC 3 cut(s) 175, 1103, 1398
HpyCH4III ACNGT 4 cut(s) 901, 910, 1170, 1578
HpyCH4IV ACGT 7 cut(s) 27, 54, 549, 618, 624, 1484, 1886
HpyCH4V TGCA 4 cut(s) 412, 432, 1382, 1676
HpyF3I CTNAG 8 cut(s) 257, 686, 710, 894, 1612, 1660, 1759, 1841
HpySE526I ACGT 7 cut(s) 27, 54, 549, 618, 624, 1484, 1886
Hsp92I GRCGYC 5 cut(s) 549, 668, 950, 1182, 1367
HspAI GCGC 7 cut(s) 693, 799, 888, 950, 1007, 1182, 1256
KasI GGCGCC 2 cut(s) 949, 1181
Kpn2I TCCGGA 3 cut(s) 505, 627, 1246
KpnI GGTACC 1 cut(s) 914
KroI GCCGGC 1 cut(s) 1417
KroNI GCCGGC 1 cut(s) 1419
Ksp22I TGATCA 2 cut(s) 1210, 1446
KspI CCGCGG 2 cut(s) 475, 850
Kzo9I GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
LguI GCTCTTC 2 cut(s) 254, 1785
LweI GCATC 8 cut(s) 132, 441, 577, 650, 926, 1045, 1533, 1573
MaeI CTAG 1 cut(s) 293
MaeII ACGT 7 cut(s) 27, 54, 549, 618, 624, 1484, 1886
MaeIII GTNAC 2 cut(s) 599, 1875
MalI GATC 6 cut(s) 98, 1176, 1193, 1212, 1442, 1448
MboI GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
MboII GAAGA 6 cut(s) 91, 106, 241, 448, 1772, 1895
MflI RGATCY 1 cut(s) 96
MhlI GDGCHC 8 cut(s) 119, 716, 1068, 1088, 1122, 1389, 1516, 1748
MluCI AATT 6 cut(s) 871, 883, 941, 975, 1141, 1566
Mly113I GGCGCC 2 cut(s) 950, 1182
MlyI GAGTC 2 cut(s) 536, 850
MmeI TCCRAC 5 cut(s) 570, 660, 768, 831, 878
MreI CGCCGGCG 1 cut(s) 1417
MroI TCCGGA 3 cut(s) 505, 627, 1246
MroNI GCCGGC 1 cut(s) 1417
MroXI GAANNNNTTC 1 cut(s) 98
MseI TTAA 6 cut(s) 362, 488, 534, 750, 903, 1356
MslI CAYNNNNRTG 1 cut(s) 1053
MspA1I CMGCKG 5 cut(s) 49, 358, 415, 474, 849
MspR9I CCNGG 6 cut(s) 389, 673, 926, 1639, 1742, 1772
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 2 cut(s) 1639, 1772
MvnI CGCG 7 cut(s) 140, 474, 695, 736, 799, 849, 890
NaeI GCCGGC 1 cut(s) 1419
NarI GGCGCC 2 cut(s) 950, 1182
NciI CCSGG 4 cut(s) 389, 673, 926, 1742
NdeII GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
NgoMIV GCCGGC 1 cut(s) 1417
NmeAIII GCCGAG 2 cut(s) 926, 1180
NruI TCGCGA 1 cut(s) 140
NspI RCATGY 3 cut(s) 1075, 1538, 1653
PciI ACATGT 1 cut(s) 1071
PciSI GCTCTTC 2 cut(s) 254, 1785
PcsI WCGNNNNNNNCGW 6 cut(s) 219, 546, 558, 650, 819, 1152
PctI GAATGC 1 cut(s) 1203
PdiI GCCGGC 1 cut(s) 1419
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 5 cut(s) 352, 392, 934, 1094, 1160
PfoI TCCNGGA 1 cut(s) 387
Ple19I CGATCG 1 cut(s) 1177
PleI GAGTC 2 cut(s) 536, 850
PluTI GGCGCC 2 cut(s) 953, 1185
PpsI GAGTC 2 cut(s) 536, 850
Ppu21I YACGTR 2 cut(s) 55, 1485
PscI ACATGT 1 cut(s) 1071
Psp124BI GAGCTC 4 cut(s) 716, 1068, 1088, 1389
Psp6I CCWGG 2 cut(s) 1637, 1770
PspFI CCCAGC 1 cut(s) 1586
PspGI CCWGG 2 cut(s) 1637, 1770
PstI CTGCAG 1 cut(s) 1384
PsuI RGATCY 1 cut(s) 96
PvuI CGATCG 1 cut(s) 1177
PvuII CAGCTG 1 cut(s) 415
RruI TCGCGA 1 cut(s) 140
RsaI GTAC 9 cut(s) 53, 374, 443, 470, 767, 912, 923, 1274, 1820
RsaNI GTAC 9 cut(s) 52, 373, 442, 469, 766, 911, 922, 1273, 1819
RseI CAYNNNNRTG 1 cut(s) 1053
Rsr2I CGGWCCG 2 cut(s) 851, 1170
RsrII CGGWCCG 2 cut(s) 851, 1170
SacI GAGCTC 4 cut(s) 716, 1068, 1088, 1389
SacII CCGCGG 2 cut(s) 475, 850
SapI GCTCTTC 2 cut(s) 254, 1785
SaqAI TTAA 6 cut(s) 362, 488, 534, 750, 903, 1356
Sau3AI GATC 6 cut(s) 96, 1174, 1191, 1210, 1440, 1446
SchI GAGTC 2 cut(s) 536, 850
ScrFI CCNGG 6 cut(s) 389, 673, 926, 1639, 1742, 1772
SduI GDGCHC 8 cut(s) 119, 716, 1068, 1088, 1122, 1389, 1516, 1748
SfaNI GCATC 8 cut(s) 132, 441, 577, 650, 926, 1045, 1533, 1573
SfcI CTRYAG 1 cut(s) 1380
SfoI GGCGCC 2 cut(s) 951, 1183
Sfr303I CCGCGG 2 cut(s) 475, 850
SgrAI CRCCGGYG 1 cut(s) 1417
SgrBI CCGCGG 2 cut(s) 475, 850
SinI GGWCC 6 cut(s) 267, 424, 815, 851, 1137, 1170
SmiMI CAYNNNNRTG 1 cut(s) 1053
SmlI CTYRAG 1 cut(s) 1785
SmoI CTYRAG 1 cut(s) 1785
Sse9I AATT 6 cut(s) 871, 883, 941, 975, 1141, 1566
SspDI GGCGCC 2 cut(s) 949, 1181
SspMI CTAG 1 cut(s) 293
SstI GAGCTC 4 cut(s) 716, 1068, 1088, 1389
StyD4I CCNGG 6 cut(s) 387, 671, 924, 1637, 1740, 1770
StyI CCWWGG 2 cut(s) 1185, 1812
TaaI ACNGT 4 cut(s) 901, 910, 1170, 1578
TaiI ACGT 7 cut(s) 30, 57, 552, 621, 627, 1487, 1889
TaqI TCGA 5 cut(s) 465, 540, 561, 644, 876
TasI AATT 6 cut(s) 871, 883, 941, 975, 1141, 1566
TatI WGTACW 2 cut(s) 765, 1818
TauI GCSGC 7 cut(s) 49, 221, 518, 893, 997, 1417, 1721
TfiI GAWTC 5 cut(s) 352, 392, 934, 1094, 1160
Tru1I TTAA 6 cut(s) 362, 488, 534, 750, 903, 1356
Tru9I TTAA 6 cut(s) 362, 488, 534, 750, 903, 1356
TscAI CASTG 6 cut(s) 119, 434, 1120, 1384, 1702, 1852
TspDTI ATGAA 4 cut(s) 215, 773, 1612, 1817
TspGWI ACGGA 2 cut(s) 70, 621
TspRI CASTG 6 cut(s) 119, 434, 1120, 1384, 1702, 1852
VpaK11BI GGWCC 6 cut(s) 267, 424, 815, 851, 1137, 1170
XapI RAATTY 1 cut(s) 941
XceI RCATGY 3 cut(s) 1075, 1538, 1653
XcmI CCANNNNNNNNNTGG 1 cut(s) 1130
XmiI GTMKAC 1 cut(s) 1893
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 293
ZraI GACGTC 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.