pycom16g13960

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
10008433 .. 10010493
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 969 bp
ATGGAGTCGCAGGGAATAGAGCACCGAACAGTCCAAGTGAACGGCATCAACATGCACGTCGCCGAGAAAGGGAATGGCCCACTCATCCTCTTCCTCCACGGCTTTCCTGAGCTCTGGTACTCCTGGCGCCACCAAATCCTCGCCCTTTCCGCCCTCGGCTACCGTGCCGTCGCCCCCGACCTCCGAGGGTACGGCGATACCGACGCCCCCGCCTCCCCTTCCAGCTACACCTGCCTCCACATGGTCGGAGACCTCGTGGCGCTCCTGGACGCCATCGCACCCGATCAGGAGAAGGTGTTCGTGGTGGCCCACGACTGGGGCGCCCTCATCGCTTGGTACCTCTGCCTGTTCCGGCCTGACCGGGTCAAAGCCTTGGTCAGCTTGAGCGTGCAGTTCATGCCGCGAAACCCTCGGAGGAAGGTCATCGAATCGTTTCAAGCTGCTTATGGCGATGACTACTACATGTGCAGATTTCAGGAGCCAGGAGTGATAGAAGCTGAGTTTGCTCAGATGGGCACTACAAGAGTTATCAAGGAGTTTCTAACATATAGGAATCCTGGTCCACTTTTCCTGCCTAAAGGCAAAGGATTTGGAAATCCCACAGATACTCCTATTGTCTTGCCAAGTTGGTTGTCTGAGGATGACGTGAACTACTACACCGCCAAATTTGACAAGACGGGCTTCACCGGCCCCGTGAACTACTATCGGAATTTGGACGTAAATTGGGAACTGACTGCACCATGGACTGGGGCTCAAGTGAAAGTTCCTGTGAAGTTCGTTGTGGGAGATCAGGACCTAGTTTACAACTCTCAAGGTGCTCCGGACTTCATACACAAAGGCGGGTTCAAGAAATTTGTGCCACTTCTGGAAGAAGTAGTTGTACTGGAAGGAGTTGCCCATTTTCTGCAACAAGAAAAGCCTGATGAAATCAGCAAACACATTCACGACTTCATCAAGAAATTCCATTAG

Protein Analysis

323

Amino Acids

36.39

Weight (kDa)

6.0

Isoelectric Point (pI)

33.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 27 - 307 1.5e-26 alpha/beta hydrolase fold
Hydrolase_4 PF12146 28 - 137 6.8e-11 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 29 - 310 1.1e-19 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 239
Acc36I ACCTGC 1 cut(s) 239
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 3 cut(s) 126, 320, 336
AccB7I CCANNNNNTGG 1 cut(s) 746
AccII CGCG 1 cut(s) 403
AccIII TCCGGA 1 cut(s) 820
AciI CCGC 5 cut(s) 150, 210, 401, 660, 840
AcsI RAATTY 4 cut(s) 665, 709, 851, 959
AcyI GRCGYC 4 cut(s) 127, 204, 270, 321
AfaI GTAC 4 cut(s) 119, 191, 338, 882
AfiI CCNNNNNNNGG 5 cut(s) 69, 241, 315, 316, 746
AflIII ACRYGT 1 cut(s) 462
AgsI TTSAA 2 cut(s) 437, 847
AjiI CACGTC 2 cut(s) 58, 646
AjnI CCWGG 4 cut(s) 122, 264, 481, 556
AloI GAACNNNNNNTCC 2 cut(s) 281, 313
AluBI AGCT 5 cut(s) 112, 225, 381, 440, 497
AluI AGCT 5 cut(s) 112, 225, 381, 440, 497
Alw21I GWGCWC 3 cut(s) 24, 114, 820
Alw26I GTCTC 1 cut(s) 243
Aor13HI TCCGGA 1 cut(s) 820
AoxI GGCC 4 cut(s) 76, 306, 353, 688
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 4 cut(s) 665, 709, 851, 959
ArsI GACNNNNNNTTYG 2 cut(s) 360, 392
Asp700I GAANNNNTTC 2 cut(s) 296, 432
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 3 cut(s) 129, 262, 323
AspS9I GGNCC 5 cut(s) 77, 307, 560, 689, 793
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 676
AvaII GGWCC 2 cut(s) 560, 793
BaeGI GKGCMC 1 cut(s) 518
BanI GGYRCC 3 cut(s) 126, 320, 336
BanII GRGCYC 2 cut(s) 114, 754
BarI GAAGNNNNNNTAC 2 cut(s) 864, 896
BauI CACGAG 1 cut(s) 254
Bbv12I GWGCWC 3 cut(s) 24, 114, 820
BbvI GCAGC 1 cut(s) 427
BccI CCATC 2 cut(s) 281, 505
BceAI ACGGC 4 cut(s) 58, 115, 152, 208
BciT130I CCWGG 4 cut(s) 124, 266, 483, 558
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 1 cut(s) 243
BfaI CTAG 1 cut(s) 797
BfoI RGCGCY 3 cut(s) 130, 263, 324
BfuAI ACCTGC 1 cut(s) 239
BisI GCNGC 2 cut(s) 401, 441
BlsI GCNGC 2 cut(s) 402, 442
Bme1390I CCNGG 5 cut(s) 124, 266, 362, 483, 558
Bme18I GGWCC 2 cut(s) 560, 793
BmgBI CACGTC 2 cut(s) 58, 646
BmgT120I GGNCC 5 cut(s) 77, 307, 560, 689, 793
BmiI GGNNCC 5 cut(s) 128, 322, 338, 480, 691
BmrFI CCNGG 5 cut(s) 124, 266, 362, 483, 558
BmrI ACTGGG 2 cut(s) 325, 756
BmsI GCATC 1 cut(s) 54
BmuI ACTGGG 2 cut(s) 325, 756
Bpu10I CCTNAGC 1 cut(s) 108
BpuEI CTTGAG 3 cut(s) 403, 738, 795
BpuMI CCSGG 1 cut(s) 362
BsaHI GRCGYC 4 cut(s) 127, 204, 270, 321
BsaI GGTCTC 1 cut(s) 243
BsaJI CCNNGG 6 cut(s) 97, 154, 184, 372, 410, 740
BsaWI WCCGGW 1 cut(s) 820
BsaXI ACNNNNNCTCC 6 cut(s) 240, 270, 281, 311, 592, 622
Bsc4I CCNNNNNNNGG 5 cut(s) 69, 241, 315, 316, 746
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 3 cut(s) 320, 751, 888
BseAI TCCGGA 1 cut(s) 820
BseBI CCWGG 4 cut(s) 124, 266, 483, 558
BseDI CCNNGG 6 cut(s) 97, 154, 184, 372, 410, 740
BseGI GGATG 2 cut(s) 84, 646
BseLI CCNNNNNNNGG 5 cut(s) 69, 241, 315, 316, 746
BseMII CTCAG 4 cut(s) 99, 489, 521, 627
BseNI ACTGG 3 cut(s) 320, 751, 888
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 1 cut(s) 427
BsgI GTGCAG 3 cut(s) 410, 487, 720
Bsh1236I CGCG 1 cut(s) 403
BshFI GGCC 4 cut(s) 78, 308, 355, 690
BshNI GGYRCC 3 cut(s) 126, 320, 336
BsiHKAI GWGCWC 3 cut(s) 24, 114, 820
BsiSI CCGG 4 cut(s) 352, 361, 687, 821
BslI CCNNNNNNNGG 5 cut(s) 69, 241, 315, 316, 746
BsmAI GTCTC 1 cut(s) 243
BsnI GGCC 4 cut(s) 78, 308, 355, 690
Bso31I GGTCTC 1 cut(s) 243
Bsp1286I GDGCHC 5 cut(s) 24, 114, 518, 754, 820
Bsp13I TCCGGA 1 cut(s) 820
Bsp143I GATC 2 cut(s) 283, 787
Bsp19I CCATGG 1 cut(s) 740
BspACI CCGC 5 cut(s) 150, 210, 401, 660, 840
BspANI GGCC 4 cut(s) 78, 308, 355, 690
BspCNI CTCAG 4 cut(s) 100, 490, 520, 628
BspEI TCCGGA 1 cut(s) 820
BspFNI CGCG 1 cut(s) 403
BspLI GGNNCC 5 cut(s) 128, 322, 338, 480, 691
BspMI ACCTGC 1 cut(s) 239
BspT107I GGYRCC 3 cut(s) 126, 320, 336
BspTNI GGTCTC 1 cut(s) 243
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 3 cut(s) 320, 751, 888
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 6 cut(s) 97, 154, 184, 372, 410, 740
BssMI GATC 2 cut(s) 283, 787
BssNI GRCGYC 4 cut(s) 127, 204, 270, 321
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 2 cut(s) 372, 740
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 4 cut(s) 124, 266, 483, 558
Bst4CI ACNGT 2 cut(s) 31, 164
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 4 cut(s) 127, 204, 270, 321
BstAPI GCANNNNNTGC 1 cut(s) 397
BstC8I GCNNGC 1 cut(s) 389
BstDEI CTNAG 4 cut(s) 108, 498, 507, 636
BstDSI CCRYGG 2 cut(s) 97, 740
BstF5I GGATG 2 cut(s) 84, 646
BstFNI CGCG 1 cut(s) 403
BstH2I RGCGCY 3 cut(s) 130, 263, 324
BstHHI GCGC 3 cut(s) 129, 262, 323
BstKTI GATC 2 cut(s) 286, 790
BstMAI GTCTC 1 cut(s) 243
BstMBI GATC 2 cut(s) 283, 787
BstMWI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
BstNI CCWGG 4 cut(s) 124, 266, 483, 558
BstNSI RCATGY 2 cut(s) 55, 466
BstSCI CCNGG 5 cut(s) 122, 264, 360, 481, 556
BstSLI GKGCMC 1 cut(s) 518
BstUI CGCG 1 cut(s) 403
BstV1I GCAGC 1 cut(s) 427
BsuRI GGCC 4 cut(s) 78, 308, 355, 690
BtgI CCRYGG 2 cut(s) 97, 740
BtgZI GCGATG 3 cut(s) 259, 313, 465
BtrI CACGTC 2 cut(s) 58, 646
BtsCI GGATG 2 cut(s) 84, 646
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 1 cut(s) 389
CfoI GCGC 3 cut(s) 129, 262, 323
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 5 cut(s) 77, 307, 560, 689, 793
CseI GACGC 2 cut(s) 212, 278
Csp6I GTAC 4 cut(s) 118, 190, 337, 881
CviAII CATG 5 cut(s) 52, 241, 397, 463, 741
CviQI GTAC 4 cut(s) 118, 190, 337, 881
DdeI CTNAG 4 cut(s) 108, 498, 507, 636
DinI GGCGCC 2 cut(s) 128, 322
DpnI GATC 2 cut(s) 285, 789
DpnII GATC 2 cut(s) 283, 787
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EciI GGCGGA 1 cut(s) 139
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 372, 740
Eco24I GRGCYC 2 cut(s) 114, 754
Eco31I GGTCTC 1 cut(s) 243
Eco47I GGWCC 2 cut(s) 560, 793
Eco53kI GAGCTC 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 793
EcoRII CCWGG 4 cut(s) 122, 264, 481, 556
EcoT14I CCWWGG 2 cut(s) 372, 740
EcoT38I GRGCYC 2 cut(s) 114, 754
EgeI GGCGCC 2 cut(s) 128, 322
EheI GGCGCC 2 cut(s) 128, 322
ErhI CCWWGG 2 cut(s) 372, 740
FaeI CATG 5 cut(s) 55, 244, 400, 466, 744
FaiI YATR 9 cut(s) 53, 242, 398, 447, 464, 547, 549, 742, 830
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FatI CATG 5 cut(s) 51, 240, 396, 462, 740
FauI CCCGC 2 cut(s) 217, 833
Fnu4HI GCNGC 2 cut(s) 401, 441
FokI GGATG 2 cut(s) 71, 653
FriOI GRGCYC 2 cut(s) 114, 754
Fsp4HI GCNGC 2 cut(s) 401, 441
FspBI CTAG 1 cut(s) 797
GlaI GCGC 3 cut(s) 128, 261, 322
GluI GCNGC 2 cut(s) 401, 441
HaeII RGCGCY 3 cut(s) 130, 263, 324
HaeIII GGCC 4 cut(s) 78, 308, 355, 690
HapII CCGG 4 cut(s) 352, 361, 687, 821
HgaI GACGC 2 cut(s) 212, 278
HhaI GCGC 3 cut(s) 129, 262, 323
Hin1I GRCGYC 4 cut(s) 127, 204, 270, 321
Hin1II CATG 5 cut(s) 55, 244, 400, 466, 744
Hin6I GCGC 3 cut(s) 127, 260, 321
HinP1I GCGC 3 cut(s) 127, 260, 321
HinfI GANTC 3 cut(s) 5, 428, 553
HpaII CCGG 4 cut(s) 352, 361, 687, 821
HphI GGTGA 1 cut(s) 676
Hpy166II GTNNAC 5 cut(s) 40, 563, 649, 697, 802
Hpy188I TCNGA 6 cut(s) 185, 248, 414, 510, 637, 708
Hpy188III TCNNGA 9 cut(s) 107, 287, 476, 791, 821, 847, 866, 944, 955
Hpy8I GTNNAC 5 cut(s) 40, 563, 649, 697, 802
Hpy99I CGWCG 3 cut(s) 62, 173, 206
HpyAV CCTTC 4 cut(s) 228, 286, 412, 881
HpyCH4III ACNGT 2 cut(s) 31, 164
HpyCH4IV ACGT 3 cut(s) 57, 645, 717
HpyCH4V TGCA 5 cut(s) 55, 391, 468, 737, 907
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
HpyF3I CTNAG 4 cut(s) 108, 498, 507, 636
HpySE526I ACGT 3 cut(s) 57, 645, 717
Hsp92I GRCGYC 4 cut(s) 127, 204, 270, 321
Hsp92II CATG 5 cut(s) 55, 244, 400, 466, 744
HspAI GCGC 3 cut(s) 127, 260, 321
KasI GGCGCC 2 cut(s) 126, 320
Kpn2I TCCGGA 1 cut(s) 820
KpnI GGTACC 1 cut(s) 340
Kzo9I GATC 2 cut(s) 283, 787
LmnI GCTCC 3 cut(s) 267, 478, 823
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 1 cut(s) 54
MaeI CTAG 1 cut(s) 797
MaeII ACGT 3 cut(s) 57, 645, 717
MalI GATC 2 cut(s) 285, 789
MboI GATC 2 cut(s) 283, 787
MboII GAAGA 2 cut(s) 82, 881
MhlI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
MluCI AATT 5 cut(s) 665, 709, 721, 851, 959
Mly113I GGCGCC 2 cut(s) 127, 321
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 226
MroI TCCGGA 1 cut(s) 820
MroXI GAANNNNTTC 2 cut(s) 296, 432
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 4 cut(s) 352, 361, 687, 821
MspR9I CCNGG 5 cut(s) 124, 266, 362, 483, 558
MvaI CCWGG 4 cut(s) 124, 266, 483, 558
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
NarI GGCGCC 2 cut(s) 127, 321
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 740
NdeII GATC 2 cut(s) 283, 787
NlaIII CATG 5 cut(s) 55, 244, 400, 466, 744
NlaIV GGNNCC 5 cut(s) 128, 322, 338, 480, 691
NmeAIII GCCGAG 2 cut(s) 88, 135
NspI RCATGY 2 cut(s) 55, 466
PaqCI CACCTGC 1 cut(s) 239
PciI ACATGT 1 cut(s) 462
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 252
PdmI GAANNNNTTC 2 cut(s) 296, 432
PfeI GAWTC 2 cut(s) 428, 553
PflFI GACNNNGTC 1 cut(s) 362
PflMI CCANNNNNTGG 1 cut(s) 746
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 2 cut(s) 402, 442
PleI GAGTC 1 cut(s) 13
PluTI GGCGCC 2 cut(s) 130, 324
PpsI GAGTC 1 cut(s) 13
PpuMI RGGWCCY 1 cut(s) 793
PscI ACATGT 1 cut(s) 462
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 4 cut(s) 122, 264, 481, 556
PspGI CCWGG 4 cut(s) 122, 264, 481, 556
PspN4I GGNNCC 5 cut(s) 128, 322, 338, 480, 691
PspPI GGNCC 5 cut(s) 77, 307, 560, 689, 793
PspPPI RGGWCCY 1 cut(s) 793
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 4 cut(s) 119, 191, 338, 882
RsaNI GTAC 4 cut(s) 118, 190, 337, 881
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 2 cut(s) 401, 441
Sau3AI GATC 2 cut(s) 283, 787
Sau96I GGNCC 5 cut(s) 77, 307, 560, 689, 793
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 5 cut(s) 124, 266, 362, 483, 558
SduI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
SfaNI GCATC 1 cut(s) 54
SfoI GGCGCC 2 cut(s) 128, 322
SinI GGWCC 2 cut(s) 560, 793
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 3 cut(s) 382, 753, 810
SmoI CTYRAG 3 cut(s) 382, 753, 810
Sse9I AATT 5 cut(s) 665, 709, 721, 851, 959
SsiI CCGC 5 cut(s) 150, 210, 401, 660, 840
SspDI GGCGCC 2 cut(s) 126, 320
SspMI CTAG 1 cut(s) 797
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 5 cut(s) 122, 264, 360, 481, 556
StyI CCWWGG 2 cut(s) 372, 740
TaaI ACNGT 2 cut(s) 31, 164
TaiI ACGT 3 cut(s) 60, 648, 720
TaqI TCGA 1 cut(s) 426
TasI AATT 5 cut(s) 665, 709, 721, 851, 959
TatI WGTACW 1 cut(s) 880
TauI GCSGC 1 cut(s) 403
TfiI GAWTC 2 cut(s) 428, 553
TseI GCWGC 1 cut(s) 440
TspDTI ATGAA 4 cut(s) 385, 817, 939, 940
Tth111I GACNNNGTC 1 cut(s) 362
Van91I CCANNNNNTGG 1 cut(s) 746
VpaK11BI GGWCC 2 cut(s) 560, 793
XapI RAATTY 4 cut(s) 665, 709, 851, 959
XceI RCATGY 2 cut(s) 55, 466
XmnI GAANNNNTTC 2 cut(s) 296, 432
XspI CTAG 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.