Exosome complex component
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61620 AT3G61620 |
| fragaria_vesca | FvH4_2g10710 FvH4_2g10710 FvH4_4g15330 FvH4_4g15330 |
| malus_domestica | MD01G1224600.v1.1 MD13G1191700.v1.1 MD16G1191800.v1.1 |
| prunus_persica | Prupe.1G011800_v2.0.a1 |
| pyrus_communis | pycom16g16150 |
| rosa_chinensis | RchiOBHm_Chr4g0416511 RchiOBHm_Chr6g0268411 RchiOBHm_Chr6g0271671 RchiOBHm_Chr7g0217091 |
| rosa_laevigata | RLG00000007977 RLG00000013911 |
| rosa_multiflora | Rmu_sc0002404.1_g000014 Rmu_sc0003132.1_g000002 Rmu_sc0003722.1_g000025 |
| rosa_roxburghii | Rroxscaffold_3G00242590 Rroxscaffold_5G00360380 Rroxscaffold_7G00199820 |
| rosa_rugosa | Rorug04G0142300 Rorug06G0041900 Rorug07G0165900 Rorug07G0166000 Rorug07G0166100 Rorug07G0166100 |
| rosa_samantha | Rh4AG204800 Rh4BG202600 Rh4CG216000 Rh4DG202000 Rh6AG161200 Rh6BG165500 Rh6BG165600 Rh6CG159100 Rh6DG151400 Rh7AG305400 Rh7BG297000 Rh7CG324500 Rh7DG305600 |
| rosa_wichuraiana | Rw4G017320 Rw6G013950 Rw7G025940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 192 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AlwI | GGATC | 1 cut(s) | 21 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| ApoI | RAATTY | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 29 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 1 cut(s) | 128 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| BmsI | GCATC | 2 cut(s) | 175, 335 |
| BpmI | CTGGAG | 1 cut(s) | 303 |
| BsaJI | CCNNGG | 3 cut(s) | 60, 92, 171 |
| Bse118I | RCCGGY | 1 cut(s) | 227 |
| BseDI | CCNNGG | 3 cut(s) | 60, 92, 171 |
| BseGI | GGATG | 1 cut(s) | 350 |
| BseMII | CTCAG | 1 cut(s) | 113 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BsiSI | CCGG | 1 cut(s) | 228 |
| Bsp143I | GATC | 3 cut(s) | 26, 146, 205 |
| Bsp19I | CCATGG | 1 cut(s) | 60 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 21 |
| BsrFI | RCCGGY | 1 cut(s) | 227 |
| BssAI | RCCGGY | 1 cut(s) | 227 |
| BssECI | CCNNGG | 3 cut(s) | 60, 92, 171 |
| BssMI | GATC | 3 cut(s) | 26, 146, 205 |
| BssT1I | CCWWGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 1 cut(s) | 172 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstDSI | CCRYGG | 2 cut(s) | 60, 171 |
| BstEII | GGTNACC | 1 cut(s) | 230 |
| BstF5I | GGATG | 1 cut(s) | 350 |
| BstKTI | GATC | 3 cut(s) | 29, 149, 208 |
| BstMBI | GATC | 3 cut(s) | 26, 146, 205 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 173, 287 |
| BstNSI | RCATGY | 2 cut(s) | 72, 156 |
| BstPI | GGTNACC | 1 cut(s) | 230 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 134 |
| BtgI | CCRYGG | 2 cut(s) | 60, 171 |
| BtsCI | GGATG | 1 cut(s) | 350 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| CaiI | CAGNNNCTG | 1 cut(s) | 188 |
| Cfr10I | RCCGGY | 1 cut(s) | 227 |
| CviAII | CATG | 3 cut(s) | 61, 69, 153 |
| CviJI | RGCY | 1 cut(s) | 176 |
| CviKI_1 | RGCY | 1 cut(s) | 176 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| DpnI | GATC | 3 cut(s) | 28, 148, 207 |
| DpnII | GATC | 3 cut(s) | 26, 146, 205 |
| DraI | TTTAAA | 1 cut(s) | 261 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| Eco130I | CCWWGG | 1 cut(s) | 60 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| Eco91I | GGTNACC | 1 cut(s) | 230 |
| EcoO65I | GGTNACC | 1 cut(s) | 230 |
| EcoRI | GAATTC | 1 cut(s) | 192 |
| EcoT14I | CCWWGG | 1 cut(s) | 60 |
| EcoT22I | ATGCAT | 1 cut(s) | 74 |
| ErhI | CCWWGG | 1 cut(s) | 60 |
| FaeI | CATG | 3 cut(s) | 64, 72, 156 |
| FaiI | YATR | 6 cut(s) | 62, 70, 77, 154, 267, 311 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 318, 350 |
| FatI | CATG | 3 cut(s) | 60, 68, 152 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GluI | GCNGC | 1 cut(s) | 165 |
| GsuI | CTGGAG | 1 cut(s) | 303 |
| HapII | CCGG | 1 cut(s) | 228 |
| Hin1II | CATG | 3 cut(s) | 64, 72, 156 |
| HinfI | GANTC | 1 cut(s) | 97 |
| HpaII | CCGG | 1 cut(s) | 228 |
| HphI | GGTGA | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 3 cut(s) | 96, 102, 184 |
| HpyCH4III | ACNGT | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 118, 167 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 173, 287 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| Hsp92II | CATG | 3 cut(s) | 64, 72, 156 |
| Kzo9I | GATC | 3 cut(s) | 26, 146, 205 |
| LpnPI | CCDG | 4 cut(s) | 174, 241, 267, 326 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| LweI | GCATC | 2 cut(s) | 175, 335 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 4 cut(s) | 211, 230, 295, 328 |
| MalI | GATC | 3 cut(s) | 28, 148, 207 |
| MboI | GATC | 3 cut(s) | 26, 146, 205 |
| MboII | GAAGA | 3 cut(s) | 284, 326, 329 |
| MluCI | AATT | 1 cut(s) | 192 |
| MlyI | GAGTC | 1 cut(s) | 91 |
| MmeI | TCCRAC | 1 cut(s) | 300 |
| MnlI | CCTC | 4 cut(s) | 102, 131, 258, 278 |
| Mph1103I | ATGCAT | 1 cut(s) | 74 |
| MseI | TTAA | 3 cut(s) | 86, 237, 260 |
| MspI | CCGG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 173, 287 |
| NcoI | CCATGG | 1 cut(s) | 60 |
| NdeII | GATC | 3 cut(s) | 26, 146, 205 |
| NlaIII | CATG | 3 cut(s) | 64, 72, 156 |
| NmuCI | GTSAC | 1 cut(s) | 295 |
| NsiI | ATGCAT | 1 cut(s) | 74 |
| NspI | RCATGY | 2 cut(s) | 72, 156 |
| PaeI | GCATGC | 1 cut(s) | 72 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PleI | GAGTC | 1 cut(s) | 91 |
| PpsI | GAGTC | 1 cut(s) | 91 |
| PspEI | GGTNACC | 1 cut(s) | 230 |
| PstNI | CAGNNNCTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 3 cut(s) | 86, 237, 260 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 3 cut(s) | 26, 146, 205 |
| SchI | GAGTC | 1 cut(s) | 91 |
| SetI | ASST | 4 cut(s) | 237, 250, 289, 307 |
| SfaNI | GCATC | 2 cut(s) | 175, 335 |
| SphI | GCATGC | 1 cut(s) | 72 |
| Sse9I | AATT | 1 cut(s) | 192 |
| SspMI | CTAG | 1 cut(s) | 144 |
| StyI | CCWWGG | 1 cut(s) | 60 |
| TaaI | ACNGT | 1 cut(s) | 172 |
| TasI | AATT | 1 cut(s) | 192 |
| Tru1I | TTAA | 3 cut(s) | 86, 237, 260 |
| Tru9I | TTAA | 3 cut(s) | 86, 237, 260 |
| TseFI | GTSAC | 1 cut(s) | 295 |
| TseI | GCWGC | 1 cut(s) | 164 |
| Tsp45I | GTSAC | 1 cut(s) | 295 |
| XapI | RAATTY | 1 cut(s) | 192 |
| XceI | RCATGY | 2 cut(s) | 72, 156 |
| XspI | CTAG | 1 cut(s) | 144 |
| Zsp2I | ATGCAT | 1 cut(s) | 74 |