Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001974

Physical Location & Seq

Genomic Coordinates Reverse (-)

21862156 .. 21870161

Gene Structure 8006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG151400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGGCCAGGCCGGCCTCACCCTCACTGCGCCGCTCCTCTCTCCTCCTCCTCCTCCTCCTCCTTCGCCGTCCGCTCAACCCCACTTGAACGTCACCTTCCACGACGACGACGACAACGGCAATGGCAGCTTCCGCAACCCGTTTGTGTTTCTCGGGTCGGGCGGGTTTAAGGTGCCCATATCGACGACGGCGGATCCGTTCAGGAACCATACTTTGAAAATCGGAGGGGTTTACGAGTGGTTAAAGATCGGGGTTTTCTTCCCCATCGCGATTTTGAGGCTTGTGATCTTTGGGGTTTCGTTGCTGATTGGGTTTGTGGCCACCAAATTGGCTCTGTTGGCTGAAGAAGAAGAGAGGATTGTGATCTTTGGGAAAGAGAGAGAGAGAGAGAGAGGGAGGGATATTCAAGAAACGAAAATCTGGGTTGCTCTTCTCAATCAAATTGTCGAGATGGAGTTCGTCAGCCCTGAAGGTCTTCGTTTAGATGGTCGTCGTCCCATGGAAATGAGACAAATTCGAGCAGAGATTGGTGTTGTAGCCAAAGCCGACGGTTCTGCTATGTTTGAGATGGGTAACACCAAAGTTGTTGCTGCTGTTTATGGCCCTAGAGAGGTCCAAAATAGGAGCCAACAACTGAATGCCAATGCGTTGGTGCGATGTGAATACACCATGGCAAATTTTAGTACCGGAGATCGGATGAGAAAACCGAAGGGTGACAGGAGATCCACAGAGATATCTCTAGTTATTCGCCAAACCATGGAAGAATGCATTTTGACAAACTTAATGCCTCGGTCTCAGATAGACATTTTTGTGCAAGTTCTCCAAGCAGATGGAGGAACTAGATCTGCATGTATCAATGCTGCAACCCTGGCCCTTGCAGACGCTGGAATTCCAATGCGGGATATTGTTACTTCGTGCAGTGCTGGGTACCTTAATAGCACACCTCTACTTGATTTAAACTATATAGAAGATAGTGCTGGAGGCGCTGATGTCACTTTAGGAATTATGCCGAAGTTGGACAAAGTGACTCTTCTTCAGATGGATGCTAAGTTGTCATTGGATACTTTTGAAAATGTAATGCAACTTGCAATCGAAGGCTGCAAGGCAGTTGCAGATTACATTAGAGAAATATTATTGGAGAACACAAAGCAATTGCAGTATCGTCGAGGAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000176 GO:0000177 GO:0000178 GO:0000288 GO:0000291 GO:0000460 GO:0000785 GO:0000956 GO:0001558 GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006304 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008334 GO:0008408 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009615 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016075 GO:0016180 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017091 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0030307 GO:0031123 GO:0031125 GO:0031126 GO:0031323 GO:0031329 GO:0031974 GO:0031981 GO:0032991 GO:0034427 GO:0034470 GO:0034472 GO:0034475 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040008 GO:0042254 GO:0043144 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043487 GO:0043488 GO:0043628 GO:0043928 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045006 GO:0045111 GO:0045927 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051607 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0071025 GO:0071027 GO:0071028 GO:0071044 GO:0071051 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0098542 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1903311 GO:1905354

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

RNase_PH RNase_PH_C

Protein Analysis

391

Amino Acids

43.04

Weight (kDa)

5.65

Isoelectric Point (pI)

39.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_PH	PF01138	168 - 298	1.4e-40	3' exoribonuclease family, domain 1
RNase_PH_C	PF03725	301 - 366	1.2e-12	3' exoribonuclease family, domain 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61620 AT3G61620
fragaria_vesca	FvH4_2g10710 FvH4_2g10710 FvH4_4g15330 FvH4_4g15330
malus_domestica	MD01G1224600.v1.1 MD13G1191700.v1.1 MD16G1191800.v1.1
prunus_persica	Prupe.1G011800_v2.0.a1
pyrus_communis	pycom16g16150
rosa_chinensis	RchiOBHm_Chr4g0416511 RchiOBHm_Chr6g0268411 RchiOBHm_Chr6g0271671 RchiOBHm_Chr7g0217091
rosa_laevigata	RLG00000007977 RLG00000013911
rosa_multiflora	Rmu_sc0002404.1_g000014 Rmu_sc0003132.1_g000002 Rmu_sc0003722.1_g000025
rosa_roxburghii	Rroxscaffold_3G00242590 Rroxscaffold_5G00360380 Rroxscaffold_7G00199820
rosa_rugosa	Rorug04G0142300 Rorug06G0041900 Rorug07G0165900 Rorug07G0166000 Rorug07G0166100 Rorug07G0166100
rosa_samantha	Rh4AG204800 Rh4BG202600 Rh4CG216000 Rh4DG202000 Rh6AG161200 Rh6BG165500 Rh6BG165600 Rh6CG159100 Rh6DG151400 Rh7AG305400 Rh7BG297000 Rh7CG324500 Rh7DG305600
rosa_wichuraiana	Rw4G017320 Rw6G013950 Rw7G025940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	927
AccB1I	GGYRCC	2 cut(s)	172, 927
AccB7I	CCANNNNNTGG	1 cut(s)	757
AccBSI	CCGCTC	2 cut(s)	34, 74
AccII	CGCG	1 cut(s)	269
AciI	CCGC	6 cut(s)	32, 72, 133, 162, 191, 898
AclWI	GGATC	3 cut(s)	188, 201, 717
AcoI	YGGCCR	1 cut(s)	318
AcsI	RAATTY	3 cut(s)	513, 676, 888
AcuI	CTGAAG	3 cut(s)	363, 489, 1019
AfaI	GTAC	2 cut(s)	685, 929
AfiI	CCNNNNNNNGG	3 cut(s)	610, 693, 757
AgsI	TTSAA	4 cut(s)	88, 217, 407, 1070
AjnI	CCWGG	2 cut(s)	6, 867
AluBI	AGCT	1 cut(s)	129
AluI	AGCT	1 cut(s)	129
Alw26I	GTCTC	2 cut(s)	502, 798
AlwI	GGATC	3 cut(s)	188, 201, 717
AlwNI	CAGNNNCTG	1 cut(s)	884
Ama87I	CYCGRG	1 cut(s)	152
AoxI	GGCC	6 cut(s)	4, 9, 13, 318, 601, 870
ApeKI	GCWGC	4 cut(s)	126, 590, 860, 1098
ApoI	RAATTY	3 cut(s)	513, 676, 888
Asp700I	GAANNNNTTC	1 cut(s)	474
Asp718I	GGTACC	1 cut(s)	927
AspLEI	GCGC	2 cut(s)	31, 986
AspS9I	GGNCC	4 cut(s)	4, 602, 613, 871
AsuHPI	GGTGA	3 cut(s)	10, 85, 725
AvaI	CYCGRG	1 cut(s)	152
AvaII	GGWCC	1 cut(s)	613
BaeGI	GKGCMC	1 cut(s)	177
BalI	TGGCCA	1 cut(s)	320
BamHI	GGATCC	1 cut(s)	193
BanI	GGYRCC	2 cut(s)	172, 927
BbsI	GAAGAC	1 cut(s)	467
BbvI	GCAGC	4 cut(s)	138, 577, 847, 1085
BccI	CCATC	6 cut(s)	272, 445, 479, 562, 824, 1033
BceAI	ACGGC	3 cut(s)	52, 133, 204
BcgI	CGANNNNNNTGC	3 cut(s)	536, 570, 1145
BciT130I	CCWGG	2 cut(s)	8, 869
BciVI	GTATCC	1 cut(s)	1054
BcoDI	GTCTC	2 cut(s)	502, 798
BfaI	CTAG	3 cut(s)	606, 740, 840
BfoI	RGCGCY	1 cut(s)	987
BfuI	GTATCC	1 cut(s)	1054
BglI	GCCNNNNNGGC	1 cut(s)	12
BglII	AGATCT	1 cut(s)	842
BisI	GCNGC	5 cut(s)	32, 127, 591, 861, 1099
BlsI	GCNGC	5 cut(s)	33, 128, 592, 862, 1100
Bme1390I	CCNGG	2 cut(s)	8, 869
Bme18I	GGWCC	1 cut(s)	613
BmeT110I	CYCGRG	1 cut(s)	152
BmgT120I	GGNCC	4 cut(s)	4, 602, 613, 871
BmiI	GGNNCC	5 cut(s)	174, 195, 206, 626, 929
BmrFI	CCNGG	2 cut(s)	8, 869
BmsI	GCATC	1 cut(s)	1033
BpiI	GAAGAC	1 cut(s)	467
BpmI	CTGGAG	1 cut(s)	999
BsaBI	GATNNNNATC	1 cut(s)	362
BsaI	GGTCTC	1 cut(s)	798
BsaJI	CCNNGG	5 cut(s)	498, 669, 756, 788, 867
BsaWI	WCCGGW	1 cut(s)	686
Bsc4I	CCNNNNNNNGG	3 cut(s)	610, 693, 757
Bse118I	RCCGGY	1 cut(s)	11
Bse3DI	GCAATG	1 cut(s)	127
Bse8I	GATNNNNATC	1 cut(s)	362
BseBI	CCWGG	2 cut(s)	8, 869
BseDI	CCNNGG	5 cut(s)	498, 669, 756, 788, 867
BseGI	GGATG	2 cut(s)	702, 1048
BseJI	GATNNNNATC	1 cut(s)	362
BseLI	CCNNNNNNNGG	3 cut(s)	610, 693, 757
BseMI	GCAATG	1 cut(s)	127
BseMII	CTCAG	1 cut(s)	809
BseRI	GAGGAG	7 cut(s)	26, 33, 36, 39, 42, 45, 48
BseSI	GKGCMC	1 cut(s)	177
BseXI	GCAGC	4 cut(s)	138, 577, 847, 1085
BseYI	CCCAGC	1 cut(s)	923
BsgI	GTGCAG	1 cut(s)	937
Bsh1236I	CGCG	1 cut(s)	269
BshFI	GGCC	6 cut(s)	6, 11, 15, 320, 603, 872
BshNI	GGYRCC	2 cut(s)	172, 927
BsiHKCI	CYCGRG	1 cut(s)	152
BsiSI	CCGG	2 cut(s)	12, 687
BslFI	GGGAC	1 cut(s)	480
BslI	CCNNNNNNNGG	3 cut(s)	610, 693, 757
BsmAI	GTCTC	2 cut(s)	502, 798
BsmFI	GGGAC	1 cut(s)	480
BsmI	GAATGC	2 cut(s)	643, 770
BsnI	GGCC	6 cut(s)	6, 11, 15, 320, 603, 872
Bso31I	GGTCTC	1 cut(s)	798
BsoBI	CYCGRG	1 cut(s)	152
Bsp1286I	GDGCHC	1 cut(s)	177
Bsp143I	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
Bsp19I	CCATGG	3 cut(s)	498, 669, 756
Bsp68I	TCGCGA	1 cut(s)	269
BspACI	CCGC	6 cut(s)	32, 72, 133, 162, 191, 898
BspANI	GGCC	6 cut(s)	6, 11, 15, 320, 603, 872
BspCNI	CTCAG	1 cut(s)	808
BspFNI	CGCG	1 cut(s)	269
BspLI	GGNNCC	5 cut(s)	174, 195, 206, 626, 929
BspPI	GGATC	3 cut(s)	188, 201, 717
BspQI	GCTCTTC	1 cut(s)	435
BspT107I	GGYRCC	2 cut(s)	172, 927
BspTNI	GGTCTC	1 cut(s)	798
BsrBI	CCGCTC	2 cut(s)	34, 74
BsrDI	GCAATG	1 cut(s)	127
BsrFI	RCCGGY	1 cut(s)	11
BssAI	RCCGGY	1 cut(s)	11
BssECI	CCNNGG	5 cut(s)	498, 669, 756, 788, 867
BssMI	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
BssT1I	CCWWGG	3 cut(s)	498, 669, 756
Bst2UI	CCWGG	2 cut(s)	8, 869
Bst4CI	ACNGT	1 cut(s)	551
Bst6I	CTCTTC	3 cut(s)	345, 435, 1035
BstC8I	GCNNGC	1 cut(s)	13
BstDEI	CTNAG	2 cut(s)	795, 1047
BstDSI	CCRYGG	3 cut(s)	498, 669, 756
BstF5I	GGATG	2 cut(s)	702, 1048
BstFNI	CGCG	1 cut(s)	269
BstH2I	RGCGCY	1 cut(s)	987
BstHHI	GCGC	2 cut(s)	31, 986
BstKTI	GATC	7 cut(s)	196, 249, 288, 366, 694, 725, 845
BstMAI	GTCTC	2 cut(s)	502, 798
BstMBI	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
BstMWI	GCNNNNNNNGC	6 cut(s)	12, 126, 132, 338, 869, 983
BstNI	CCWGG	2 cut(s)	8, 869
BstNSI	RCATGY	1 cut(s)	852
BstSCI	CCNGG	2 cut(s)	6, 867
BstSLI	GKGCMC	1 cut(s)	177
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	4 cut(s)	138, 577, 847, 1085
BstV2I	GAAGAC	1 cut(s)	467
BstX2I	RGATCY	3 cut(s)	193, 722, 842
BstXI	CCANNNNNNTGG	3 cut(s)	328, 649, 830
BstYI	RGATCY	3 cut(s)	193, 722, 842
BsuI	GTATCC	1 cut(s)	1054
BsuRI	GGCC	6 cut(s)	6, 11, 15, 320, 603, 872
BtgI	CCRYGG	3 cut(s)	498, 669, 756
BtgZI	GCGATG	2 cut(s)	250, 670
BtsCI	GGATG	2 cut(s)	702, 1048
BtsI	GCAGTG	2 cut(s)	24, 925
BtsIMutI	CAGTG	2 cut(s)	24, 925
BtuMI	TCGCGA	1 cut(s)	269
Cac8I	GCNNGC	1 cut(s)	13
CaiI	CAGNNNCTG	1 cut(s)	884
CfoI	GCGC	2 cut(s)	31, 986
Cfr10I	RCCGGY	1 cut(s)	11
Cfr13I	GGNCC	4 cut(s)	4, 602, 613, 871
CseI	GACGC	1 cut(s)	890
Csp6I	GTAC	2 cut(s)	684, 928
CviAII	CATG	4 cut(s)	499, 670, 757, 849
CviQI	GTAC	2 cut(s)	684, 928
DdeI	CTNAG	2 cut(s)	795, 1047
DpnI	GATC	7 cut(s)	195, 248, 287, 365, 693, 724, 844
DpnII	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
DraI	TTTAAA	1 cut(s)	957
EaeI	YGGCCR	1 cut(s)	318
Eam1104I	CTCTTC	3 cut(s)	345, 435, 1035
EarI	CTCTTC	3 cut(s)	345, 435, 1035
EciI	GGCGGA	1 cut(s)	206
Eco130I	CCWWGG	3 cut(s)	498, 669, 756
Eco31I	GGTCTC	1 cut(s)	798
Eco32I	GATATC	1 cut(s)	735
Eco47I	GGWCC	1 cut(s)	613
Eco57I	CTGAAG	3 cut(s)	363, 489, 1019
Eco88I	CYCGRG	1 cut(s)	152
EcoRI	GAATTC	1 cut(s)	888
EcoRII	CCWGG	2 cut(s)	6, 867
EcoRV	GATATC	1 cut(s)	735
EcoT14I	CCWWGG	3 cut(s)	498, 669, 756
EcoT22I	ATGCAT	1 cut(s)	770
ErhI	CCWWGG	3 cut(s)	498, 669, 756
FaeI	CATG	4 cut(s)	502, 673, 760, 852
FalI	AAGNNNNNCTT	2 cut(s)	1014, 1046
FaqI	GGGAC	1 cut(s)	480
FatI	CATG	4 cut(s)	498, 669, 756, 848
FauI	CCCGC	2 cut(s)	155, 891
Fnu4HI	GCNGC	5 cut(s)	32, 127, 591, 861, 1099
FokI	GGATG	2 cut(s)	709, 1055
FseI	GGCCGGCC	1 cut(s)	15
Fsp4HI	GCNGC	5 cut(s)	32, 127, 591, 861, 1099
FspBI	CTAG	3 cut(s)	606, 740, 840
GlaI	GCGC	2 cut(s)	30, 985
GluI	GCNGC	5 cut(s)	32, 127, 591, 861, 1099
GsaI	CCCAGC	1 cut(s)	927
GsuI	CTGGAG	1 cut(s)	999
HaeII	RGCGCY	1 cut(s)	987
HaeIII	GGCC	6 cut(s)	6, 11, 15, 320, 603, 872
HapII	CCGG	2 cut(s)	12, 687
HgaI	GACGC	1 cut(s)	890
HhaI	GCGC	2 cut(s)	31, 986
Hin1II	CATG	4 cut(s)	502, 673, 760, 852
Hin6I	GCGC	2 cut(s)	29, 984
HinP1I	GCGC	2 cut(s)	29, 984
HinfI	GANTC	1 cut(s)	1027
HpaII	CCGG	2 cut(s)	12, 687
HphI	GGTGA	3 cut(s)	10, 85, 725
Hpy166II	GTNNAC	1 cut(s)	232
Hpy188I	TCNGA	4 cut(s)	224, 696, 798, 1038
Hpy188III	TCNNGA	4 cut(s)	202, 268, 407, 448
Hpy8I	GTNNAC	1 cut(s)	232
Hpy99I	CGWCG	8 cut(s)	107, 110, 113, 187, 190, 495, 551, 1167
HpyAV	CCTTC	5 cut(s)	72, 106, 464, 703, 1088
HpyCH4III	ACNGT	1 cut(s)	551
HpyCH4IV	ACGT	1 cut(s)	90
HpyF10VI	GCNNNNNNNGC	6 cut(s)	12, 126, 132, 338, 869, 983
HpyF3I	CTNAG	2 cut(s)	795, 1047
HpySE526I	ACGT	1 cut(s)	90
Hsp92II	CATG	4 cut(s)	502, 673, 760, 852
HspAI	GCGC	2 cut(s)	29, 984
KpnI	GGTACC	1 cut(s)	931
KroI	GCCGGC	1 cut(s)	11
KroNI	GCCGGC	1 cut(s)	13
Kzo9I	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
LguI	GCTCTTC	1 cut(s)	435
LmnI	GCTCC	2 cut(s)	39, 624
Lsp1109I	GCAGC	4 cut(s)	138, 577, 847, 1085
LweI	GCATC	1 cut(s)	1033
MaeI	CTAG	3 cut(s)	606, 740, 840
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	6 cut(s)	91, 572, 713, 907, 991, 1024
MalI	GATC	7 cut(s)	195, 248, 287, 365, 693, 724, 844
MbiI	CCGCTC	2 cut(s)	34, 74
MboI	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
MfeI	CAATTG	1 cut(s)	1151
MflI	RGATCY	3 cut(s)	193, 722, 842
MhlI	GDGCHC	1 cut(s)	177
MlsI	TGGCCA	1 cut(s)	320
MluCI	AATT	7 cut(s)	326, 441, 513, 676, 888, 1002, 1151
MluNI	TGGCCA	1 cut(s)	320
MlyI	GAGTC	1 cut(s)	1021
MmeI	TCCRAC	1 cut(s)	996
Mox20I	TGGCCA	1 cut(s)	320
Mph1103I	ATGCAT	1 cut(s)	770
MroNI	GCCGGC	1 cut(s)	11
MroXI	GAANNNNTTC	1 cut(s)	474
MscI	TGGCCA	1 cut(s)	320
MseI	TTAA	5 cut(s)	168, 242, 782, 933, 956
MslI	CAYNNNNRTG	2 cut(s)	503, 809
Msp20I	TGGCCA	1 cut(s)	320
MspI	CCGG	2 cut(s)	12, 687
MspR9I	CCNGG	2 cut(s)	8, 869
MunI	CAATTG	1 cut(s)	1151
Mva1269I	GAATGC	2 cut(s)	643, 770
MvaI	CCWGG	2 cut(s)	8, 869
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	6 cut(s)	12, 126, 132, 338, 869, 983
NaeI	GCCGGC	1 cut(s)	13
NcoI	CCATGG	3 cut(s)	498, 669, 756
NdeII	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
NgoMIV	GCCGGC	1 cut(s)	11
NlaIII	CATG	4 cut(s)	502, 673, 760, 852
NlaIV	GGNNCC	5 cut(s)	174, 195, 206, 626, 929
NmuCI	GTSAC	4 cut(s)	91, 713, 991, 1024
NruI	TCGCGA	1 cut(s)	269
NsiI	ATGCAT	1 cut(s)	770
NspI	RCATGY	1 cut(s)	852
PciSI	GCTCTTC	1 cut(s)	435
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 194
PctI	GAATGC	2 cut(s)	643, 770
PdiI	GCCGGC	1 cut(s)	13
PdmI	GAANNNNTTC	1 cut(s)	474
PflMI	CCANNNNNTGG	1 cut(s)	757
PkrI	GCNGC	5 cut(s)	33, 128, 592, 862, 1100
PleI	GAGTC	1 cut(s)	1021
PpsI	GAGTC	1 cut(s)	1021
Psp6I	CCWGG	2 cut(s)	6, 867
PspFI	CCCAGC	1 cut(s)	923
PspGI	CCWGG	2 cut(s)	6, 867
PspN4I	GGNNCC	5 cut(s)	174, 195, 206, 626, 929
PspPI	GGNCC	4 cut(s)	4, 602, 613, 871
PstNI	CAGNNNCTG	1 cut(s)	884
PsuI	RGATCY	3 cut(s)	193, 722, 842
RigI	GGCCGGCC	1 cut(s)	15
RruI	TCGCGA	1 cut(s)	269
RsaI	GTAC	2 cut(s)	685, 929
RsaNI	GTAC	2 cut(s)	684, 928
RseI	CAYNNNNRTG	2 cut(s)	503, 809
SapI	GCTCTTC	1 cut(s)	435
SaqAI	TTAA	5 cut(s)	168, 242, 782, 933, 956
SatI	GCNGC	5 cut(s)	32, 127, 591, 861, 1099
Sau3AI	GATC	7 cut(s)	193, 246, 285, 363, 691, 722, 842
Sau96I	GGNCC	4 cut(s)	4, 602, 613, 871
SchI	GAGTC	1 cut(s)	1021
ScrFI	CCNGG	2 cut(s)	8, 869
SduI	GDGCHC	1 cut(s)	177
SetI	ASST	8 cut(s)	93, 98, 131, 174, 475, 615, 933, 946
SfaNI	GCATC	1 cut(s)	1033
SfiI	GGCCNNNNNGGCC	1 cut(s)	12
SinI	GGWCC	1 cut(s)	613
SmiMI	CAYNNNNRTG	2 cut(s)	503, 809
Sse9I	AATT	7 cut(s)	326, 441, 513, 676, 888, 1002, 1151
SsiI	CCGC	6 cut(s)	32, 72, 133, 162, 191, 898
SspI	AATATT	1 cut(s)	1131
SspMI	CTAG	3 cut(s)	606, 740, 840
StyD4I	CCNGG	2 cut(s)	6, 867
StyI	CCWWGG	3 cut(s)	498, 669, 756
TaaI	ACNGT	1 cut(s)	551
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	5 cut(s)	182, 447, 517, 1092, 1165
TaqII	GACCGA	1 cut(s)	780
TasI	AATT	7 cut(s)	326, 441, 513, 676, 888, 1002, 1151
TauI	GCSGC	1 cut(s)	34
Tru1I	TTAA	5 cut(s)	168, 242, 782, 933, 956
Tru9I	TTAA	5 cut(s)	168, 242, 782, 933, 956
TscAI	CASTG	2 cut(s)	31, 925
TseFI	GTSAC	4 cut(s)	91, 713, 991, 1024
TseI	GCWGC	4 cut(s)	126, 590, 860, 1098
Tsp45I	GTSAC	4 cut(s)	91, 713, 991, 1024
TspGWI	ACGGA	1 cut(s)	186
TspRI	CASTG	2 cut(s)	31, 925
Van91I	CCANNNNNTGG	1 cut(s)	757
VpaK11BI	GGWCC	1 cut(s)	613
XapI	RAATTY	3 cut(s)	513, 676, 888
XceI	RCATGY	1 cut(s)	852
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	3 cut(s)	606, 740, 840
Zsp2I	ATGCAT	1 cut(s)	770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.