pycom16g23930

N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0001436
Physical Location & Seq
Forward (+)
25182344 .. 25186502
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 783 bp
ATGGCATGGTTCTTGATTGTTTCTTCAGTGATTGTACTTTGGGTAGCTTCGTTATTCAAAATTATTCACGGCTCATATTCGCTTCCCAAGGGCACTTTTTTGAATAATTTGAAAAATGGTGGCAGTGTCAACAAGAGAAATGTTTTGTTCGTTGTTGCCCACCCAGATGACGAGTCCATGTTCTTTACTCCAACAATAAACTATCTGACCTCGAGAGGGCATAATGTTCACATTTTATGCTTGTCAATTGGTGATGCAGATGGCAAGGGAACTACAAGAAAAGAAGAGCTCTACCAGGCTTCTGCAATTCTCAAGGTTCCGCATCAACAAGTGTCGGTTCTGGATCATCCAGATCTTCAGGATGGTTTTGGCAAAGTTTGGAATGATAGCATATTGGCAAATATTATCGAAGAGGAAATTACAAGAAACAGCATTGACTTGATAATTACTTTTGATAACTACGGAGTTTCAGGCCATTGTAACCACTGTGATGTGCATTATGGGGTAAGGAAACTCTTACAAGCGTCGTCACAAAGGAAAATTGAAGCCTGGGAACTCGTTAGTACAAACATATTTCGCAAGTATAGCGGACCAGTCGATATCTGGCTGTCCAGTTTAAATCCCATGCAATCCTCACATGAAGTGGTGCATTGCTTGCTCAATGAGCAGCCCAGAAAGAGCTTCCTGGCGATGGCACAACATTCCAGCCAATGGGTTTGGTTCCGCAAGCTGTTTGTAGCATTTTCCAGTTACACGTATGTGAACACGCTTAAAAAAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
PIG-L

Protein Analysis

261

Amino Acids

29.49

Weight (kDa)

8.3

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIG-L PF02585 49 - 171 1.7e-23 GlcNAc-PI de-N-acetylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 711
AciI CCGC 3 cut(s) 320, 588, 724
AclWI GGATC 1 cut(s) 351
AcuI CTGAAG 2 cut(s) 9, 341
AfaI GTAC 2 cut(s) 36, 565
AfiI CCNNNNNNNGG 3 cut(s) 216, 691, 711
AflIII ACRYGT 1 cut(s) 753
AgsI TTSAA 4 cut(s) 58, 103, 112, 545
AjnI CCWGG 3 cut(s) 294, 548, 684
AleI CACNNNNGTG 1 cut(s) 758
AluBI AGCT 4 cut(s) 47, 289, 681, 730
AluI AGCT 4 cut(s) 47, 289, 681, 730
Alw21I GWGCWC 1 cut(s) 291
AlwI GGATC 1 cut(s) 351
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 1 cut(s) 472
ApeKI GCWGC 1 cut(s) 667
AspS9I GGNCC 1 cut(s) 590
AsuHPI GGTGA 1 cut(s) 263
AvaI CYCGRG 1 cut(s) 211
AvaII GGWCC 1 cut(s) 590
BaeGI GKGCMC 1 cut(s) 95
BanII GRGCYC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 1 cut(s) 679
BccI CCATC 3 cut(s) 254, 356, 685
BceAI ACGGC 1 cut(s) 85
BciT130I CCWGG 3 cut(s) 296, 550, 686
BglII AGATCT 1 cut(s) 352
BisI GCNGC 1 cut(s) 668
BlsI GCNGC 1 cut(s) 669
Bme1390I CCNGG 3 cut(s) 296, 550, 686
Bme18I GGWCC 1 cut(s) 590
BmeT110I CYCGRG 1 cut(s) 211
BmgT120I GGNCC 1 cut(s) 590
BmiI GGNNCC 2 cut(s) 318, 722
BmrFI CCNGG 3 cut(s) 296, 550, 686
BmsI GCATC 2 cut(s) 244, 331
BpuEI CTTGAG 1 cut(s) 296
BsaAI YACGTR 1 cut(s) 756
BsaJI CCNNGG 2 cut(s) 87, 549
Bsc4I CCNNNNNNNGG 3 cut(s) 216, 691, 711
Bse1I ACTGG 3 cut(s) 593, 612, 747
Bse3DI GCAATG 1 cut(s) 649
BseBI CCWGG 3 cut(s) 296, 550, 686
BseDI CCNNGG 2 cut(s) 87, 549
BseGI GGATG 2 cut(s) 346, 367
BseLI CCNNNNNNNGG 3 cut(s) 216, 691, 711
BseMI GCAATG 1 cut(s) 649
BseNI ACTGG 3 cut(s) 593, 612, 747
BseSI GKGCMC 1 cut(s) 95
BseXI GCAGC 1 cut(s) 679
BshFI GGCC 1 cut(s) 474
BsiHKAI GWGCWC 1 cut(s) 291
BsiHKCI CYCGRG 1 cut(s) 211
BslI CCNNNNNNNGG 3 cut(s) 216, 691, 711
BsnI GGCC 1 cut(s) 474
BsoBI CYCGRG 1 cut(s) 211
Bsp1286I GDGCHC 2 cut(s) 95, 291
Bsp143I GATC 2 cut(s) 343, 352
BspACI CCGC 3 cut(s) 320, 588, 724
BspANI GGCC 1 cut(s) 474
BspLI GGNNCC 2 cut(s) 318, 722
BspPI GGATC 1 cut(s) 351
BspQI GCTCTTC 1 cut(s) 279
BsrDI GCAATG 1 cut(s) 649
BsrI ACTGG 3 cut(s) 593, 612, 747
BssECI CCNNGG 2 cut(s) 87, 549
BssMI GATC 2 cut(s) 343, 352
BssT1I CCWWGG 1 cut(s) 87
Bst2UI CCWGG 3 cut(s) 296, 550, 686
Bst4CI ACNGT 1 cut(s) 488
Bst6I CTCTTC 2 cut(s) 279, 405
BstAPI GCANNNNNTGC 1 cut(s) 655
BstBAI YACGTR 1 cut(s) 756
BstC8I GCNNGC 2 cut(s) 656, 728
BstF5I GGATG 2 cut(s) 346, 367
BstKTI GATC 2 cut(s) 346, 355
BstMBI GATC 2 cut(s) 343, 352
BstMWI GCNNNNNNNGC 3 cut(s) 585, 655, 664
BstNI CCWGG 3 cut(s) 296, 550, 686
BstSCI CCNGG 3 cut(s) 294, 548, 684
BstSLI GKGCMC 1 cut(s) 95
BstV1I GCAGC 1 cut(s) 679
BstX2I RGATCY 1 cut(s) 352
BstYI RGATCY 1 cut(s) 352
BsuRI GGCC 1 cut(s) 474
BtgZI GCGATG 1 cut(s) 704
BtsCI GGATG 2 cut(s) 346, 367
BtsI GCAGTG 1 cut(s) 130
BtsIMutI CAGTG 3 cut(s) 33, 130, 484
Cac8I GCNNGC 2 cut(s) 656, 728
Cfr13I GGNCC 1 cut(s) 590
CseI GACGC 1 cut(s) 513
Csp6I GTAC 2 cut(s) 35, 564
CviAII CATG 4 cut(s) 6, 178, 625, 638
CviQI GTAC 2 cut(s) 35, 564
DpnI GATC 2 cut(s) 345, 354
DpnII GATC 2 cut(s) 343, 352
DraI TTTAAA 1 cut(s) 618
Eam1104I CTCTTC 2 cut(s) 279, 405
EarI CTCTTC 2 cut(s) 279, 405
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 1 cut(s) 87
Eco24I GRGCYC 1 cut(s) 291
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 1 cut(s) 590
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 2 cut(s) 9, 341
Eco88I CYCGRG 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 289
EcoRII CCWGG 3 cut(s) 294, 548, 684
EcoRV GATATC 1 cut(s) 601
EcoT14I CCWWGG 1 cut(s) 87
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 4 cut(s) 9, 181, 628, 641
FatI CATG 4 cut(s) 5, 177, 624, 637
Fnu4HI GCNGC 1 cut(s) 668
FokI GGATG 2 cut(s) 333, 374
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 1 cut(s) 668
GluI GCNGC 1 cut(s) 668
HaeIII GGCC 1 cut(s) 474
HgaI GACGC 1 cut(s) 513
Hin1II CATG 4 cut(s) 9, 181, 628, 641
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 1 cut(s) 173
HphI GGTGA 1 cut(s) 263
Hpy166II GTNNAC 3 cut(s) 130, 229, 763
Hpy188I TCNGA 1 cut(s) 207
Hpy188III TCNNGA 5 cut(s) 13, 213, 341, 350, 359
Hpy8I GTNNAC 3 cut(s) 130, 229, 763
Hpy99I CGWCG 1 cut(s) 529
HpyCH4III ACNGT 1 cut(s) 488
HpyCH4IV ACGT 1 cut(s) 755
HpyCH4V TGCA 5 cut(s) 257, 305, 496, 628, 649
HpyF10VI GCNNNNNNNGC 3 cut(s) 585, 655, 664
HpySE526I ACGT 1 cut(s) 755
Hsp92II CATG 4 cut(s) 9, 181, 628, 641
Kzo9I GATC 2 cut(s) 343, 352
LguI GCTCTTC 1 cut(s) 279
Lsp1109I GCAGC 1 cut(s) 679
LweI GCATC 2 cut(s) 244, 331
MaeII ACGT 1 cut(s) 755
MaeIII GTNAC 3 cut(s) 479, 528, 749
MalI GATC 2 cut(s) 345, 354
MboI GATC 2 cut(s) 343, 352
MboII GAAGA 4 cut(s) 15, 296, 347, 422
MfeI CAATTG 1 cut(s) 246
MflI RGATCY 1 cut(s) 352
MhlI GDGCHC 2 cut(s) 95, 291
MluCI AATT 7 cut(s) 60, 106, 246, 306, 417, 444, 540
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 4 cut(s) 209, 220, 406, 643
MseI TTAA 2 cut(s) 617, 771
MslI CAYNNNNRTG 3 cut(s) 165, 489, 758
MspR9I CCNGG 3 cut(s) 296, 550, 686
MunI CAATTG 1 cut(s) 246
MvaI CCWGG 3 cut(s) 296, 550, 686
MwoI GCNNNNNNNGC 3 cut(s) 585, 655, 664
NdeII GATC 2 cut(s) 343, 352
NlaIII CATG 4 cut(s) 9, 181, 628, 641
NlaIV GGNNCC 2 cut(s) 318, 722
NmuCI GTSAC 1 cut(s) 528
OliI CACNNNNGTG 1 cut(s) 758
PaeR7I CTCGAG 1 cut(s) 211
PciSI GCTCTTC 1 cut(s) 279
PflMI CCANNNNNTGG 1 cut(s) 711
PkrI GCNGC 1 cut(s) 669
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
Ppu21I YACGTR 1 cut(s) 756
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 3 cut(s) 294, 548, 684
PspGI CCWGG 3 cut(s) 294, 548, 684
PspN4I GGNNCC 2 cut(s) 318, 722
PspPI GGNCC 1 cut(s) 590
PsuI RGATCY 1 cut(s) 352
RsaI GTAC 2 cut(s) 36, 565
RsaNI GTAC 2 cut(s) 35, 564
RseI CAYNNNNRTG 3 cut(s) 165, 489, 758
SacI GAGCTC 1 cut(s) 291
SapI GCTCTTC 1 cut(s) 279
SaqAI TTAA 2 cut(s) 617, 771
SatI GCNGC 1 cut(s) 668
Sau3AI GATC 2 cut(s) 343, 352
Sau96I GGNCC 1 cut(s) 590
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 3 cut(s) 296, 550, 686
SduI GDGCHC 2 cut(s) 95, 291
SetI ASST 7 cut(s) 49, 212, 291, 318, 683, 732, 758
SfaNI GCATC 2 cut(s) 244, 331
Sfr274I CTCGAG 1 cut(s) 211
SinI GGWCC 1 cut(s) 590
SlaI CTCGAG 1 cut(s) 211
SmiMI CAYNNNNRTG 3 cut(s) 165, 489, 758
SmlI CTYRAG 2 cut(s) 211, 311
SmoI CTYRAG 2 cut(s) 211, 311
Sse9I AATT 7 cut(s) 60, 106, 246, 306, 417, 444, 540
SsiI CCGC 3 cut(s) 320, 588, 724
SspI AATATT 1 cut(s) 403
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 3 cut(s) 294, 548, 684
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 1 cut(s) 488
TaiI ACGT 1 cut(s) 758
TaqI TCGA 3 cut(s) 212, 408, 597
TasI AATT 7 cut(s) 60, 106, 246, 306, 417, 444, 540
TatI WGTACW 2 cut(s) 34, 563
Tru1I TTAA 2 cut(s) 617, 771
Tru9I TTAA 2 cut(s) 617, 771
TscAI CASTG 3 cut(s) 33, 130, 491
TseFI GTSAC 1 cut(s) 528
TseI GCWGC 1 cut(s) 667
Tsp45I GTSAC 1 cut(s) 528
TspDTI ATGAA 1 cut(s) 654
TspGWI ACGGA 1 cut(s) 477
TspRI CASTG 3 cut(s) 33, 130, 491
Van91I CCANNNNNTGG 1 cut(s) 711
VpaK11BI GGWCC 1 cut(s) 590
XcmI CCANNNNNNNNNTGG 1 cut(s) 600
XhoI CTCGAG 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.