Rh7BG205000

N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001436
Physical Location & Seq
Forward (+)
17145124 .. 17150294
5171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG205000.1

Sequence Viewer

Length: 423 bp
ATGGCGTGGTTGTTGATTATCTCTTCTGTGGTTGTAATATGGATAGCTTCTCTGTTCAAAATTCTCCATGGTTCATACTCACCTTCCAAGGGCGCTTTCTTGAATGATTCTAATAATGGTGGCAGTGCCAAGAAGAGAAATGTGTTGCTGGTTGTTGCCCACCCAGACGATGAGTCCATGTTCTTCACTCCAACAATAAACTACCTCACTTTGAGAGGGCATAATATTCACATCTTATGCTTGTCAATTGGTGATGCAGATGGTAAGGGAAATACCAGAAAAGAAGAGCTCTACCAGGCTTCTGCAATCCTCAAGGTTCCACATCAACATGTGAAAATTCTGGACCATCCAGATCTTCAGGATGGTTTTGGTAAGTTGTGGATCACAATTTATTGGCAAAGATTATTGAAGAGGAAGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
PIG-L

Protein Analysis

140

Amino Acids

15.76

Weight (kDa)

9.44

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIG-L PF02585 49 - 118 2.5e-14 GlcNAc-PI de-N-acetylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 389
AcsI RAATTY 2 cut(s) 60, 336
AcuI CTGAAG 1 cut(s) 341
AfiI CCNNNNNNNGG 1 cut(s) 89
AflIII ACRYGT 1 cut(s) 328
AgsI TTSAA 3 cut(s) 58, 103, 409
AhdI GACNNNNNGTC 1 cut(s) 172
AjnI CCWGG 1 cut(s) 294
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
AluBI AGCT 2 cut(s) 47, 289
AluI AGCT 2 cut(s) 47, 289
Alw21I GWGCWC 1 cut(s) 291
AlwI GGATC 1 cut(s) 389
ApoI RAATTY 2 cut(s) 60, 336
AspLEI GCGC 1 cut(s) 95
AspS9I GGNCC 1 cut(s) 343
AsuHPI GGTGA 2 cut(s) 72, 263
AvaII GGWCC 1 cut(s) 343
BanII GRGCYC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 291
BccI CCATC 3 cut(s) 254, 354, 356
BciT130I CCWGG 1 cut(s) 296
BfoI RGCGCY 1 cut(s) 96
BglII AGATCT 1 cut(s) 352
Bme1390I CCNGG 1 cut(s) 296
Bme18I GGWCC 1 cut(s) 343
BmeRI GACNNNNNGTC 1 cut(s) 172
BmgT120I GGNCC 1 cut(s) 343
BmiI GGNNCC 1 cut(s) 318
BmrFI CCNGG 1 cut(s) 296
BmsI GCATC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 296
BsaJI CCNNGG 2 cut(s) 67, 87
Bsc4I CCNNNNNNNGG 1 cut(s) 89
BseBI CCWGG 1 cut(s) 296
BseDI CCNNGG 2 cut(s) 67, 87
BseGI GGATG 2 cut(s) 346, 367
BseLI CCNNNNNNNGG 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 291
BslI CCNNNNNNNGG 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 291
Bsp143I GATC 2 cut(s) 352, 381
Bsp19I CCATGG 1 cut(s) 67
BspLI GGNNCC 1 cut(s) 318
BspPI GGATC 1 cut(s) 389
BspQI GCTCTTC 1 cut(s) 279
BssECI CCNNGG 2 cut(s) 67, 87
BssMI GATC 2 cut(s) 352, 381
BssT1I CCWWGG 2 cut(s) 67, 87
Bst2UI CCWGG 1 cut(s) 296
Bst6I CTCTTC 4 cut(s) 28, 128, 279, 404
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 2 cut(s) 346, 367
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 1 cut(s) 95
BstKTI GATC 2 cut(s) 355, 384
BstMBI GATC 2 cut(s) 352, 381
BstNI CCWGG 1 cut(s) 296
BstNSI RCATGY 1 cut(s) 332
BstSCI CCNGG 1 cut(s) 294
BstX2I RGATCY 1 cut(s) 352
BstYI RGATCY 1 cut(s) 352
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 2 cut(s) 346, 367
BtsI GCAGTG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 130
CfoI GCGC 1 cut(s) 95
Cfr13I GGNCC 1 cut(s) 343
CviAII CATG 3 cut(s) 68, 178, 329
CviJI RGCY 3 cut(s) 47, 289, 299
CviKI_1 RGCY 3 cut(s) 47, 289, 299
DpnI GATC 2 cut(s) 354, 383
DpnII GATC 2 cut(s) 352, 381
DriI GACNNNNNGTC 1 cut(s) 172
Eam1104I CTCTTC 4 cut(s) 28, 128, 279, 404
Eam1105I GACNNNNNGTC 1 cut(s) 172
EarI CTCTTC 4 cut(s) 28, 128, 279, 404
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 2 cut(s) 67, 87
Eco24I GRGCYC 1 cut(s) 291
Eco47I GGWCC 1 cut(s) 343
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 1 cut(s) 341
EcoICRI GAGCTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 294
EcoT14I CCWWGG 2 cut(s) 67, 87
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 2 cut(s) 67, 87
FaeI CATG 3 cut(s) 71, 181, 332
FaiI YATR 7 cut(s) 40, 69, 76, 179, 222, 238, 330
FatI CATG 3 cut(s) 67, 177, 328
FokI GGATG 2 cut(s) 333, 374
FriOI GRGCYC 1 cut(s) 291
GlaI GCGC 1 cut(s) 94
HaeII RGCGCY 1 cut(s) 96
HhaI GCGC 1 cut(s) 95
Hin1II CATG 3 cut(s) 71, 181, 332
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HinfI GANTC 2 cut(s) 107, 173
HphI GGTGA 2 cut(s) 72, 263
Hpy188III TCNNGA 4 cut(s) 100, 341, 350, 359
HpyAV CCTTC 1 cut(s) 93
HpyCH4V TGCA 2 cut(s) 257, 305
Hsp92II CATG 3 cut(s) 71, 181, 332
HspAI GCGC 1 cut(s) 93
Kzo9I GATC 2 cut(s) 352, 381
LguI GCTCTTC 1 cut(s) 279
LpnPI CCDG 8 cut(s) 134, 177, 281, 289, 308, 326, 344, 363
LweI GCATC 1 cut(s) 244
MalI GATC 2 cut(s) 354, 383
MboI GATC 2 cut(s) 352, 381
MboII GAAGA 6 cut(s) 15, 145, 175, 296, 347, 421
MfeI CAATTG 1 cut(s) 246
MflI RGATCY 1 cut(s) 352
MhlI GDGCHC 1 cut(s) 291
MluCI AATT 4 cut(s) 60, 246, 336, 387
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 4 cut(s) 209, 215, 320, 405
MslI CAYNNNNRTG 1 cut(s) 327
MspR9I CCNGG 1 cut(s) 296
MunI CAATTG 1 cut(s) 246
MvaI CCWGG 1 cut(s) 296
NcoI CCATGG 1 cut(s) 67
NdeII GATC 2 cut(s) 352, 381
NlaIII CATG 3 cut(s) 71, 181, 332
NlaIV GGNNCC 1 cut(s) 318
NspI RCATGY 1 cut(s) 332
PciI ACATGT 1 cut(s) 328
PciSI GCTCTTC 1 cut(s) 279
PfeI GAWTC 1 cut(s) 107
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PscI ACATGT 1 cut(s) 328
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 1 cut(s) 294
PspGI CCWGG 1 cut(s) 294
PspN4I GGNNCC 1 cut(s) 318
PspPI GGNCC 1 cut(s) 343
PsuI RGATCY 1 cut(s) 352
RseI CAYNNNNRTG 1 cut(s) 327
SacI GAGCTC 1 cut(s) 291
SapI GCTCTTC 1 cut(s) 279
Sau3AI GATC 2 cut(s) 352, 381
Sau96I GGNCC 1 cut(s) 343
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 296
SduI GDGCHC 1 cut(s) 291
SetI ASST 5 cut(s) 49, 85, 207, 291, 318
SfaNI GCATC 1 cut(s) 244
SinI GGWCC 1 cut(s) 343
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
Sse9I AATT 4 cut(s) 60, 246, 336, 387
SspI AATATT 1 cut(s) 226
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 1 cut(s) 294
StyI CCWWGG 2 cut(s) 67, 87
TasI AATT 4 cut(s) 60, 246, 336, 387
TfiI GAWTC 1 cut(s) 107
TscAI CASTG 1 cut(s) 130
TspDTI ATGAA 1 cut(s) 63
TspRI CASTG 1 cut(s) 130
VpaK11BI GGWCC 1 cut(s) 343
XapI RAATTY 2 cut(s) 60, 336
XceI RCATGY 1 cut(s) 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.