Rh7CG216700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
19714635 .. 19715509
875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG216700.1

Sequence Viewer

Length: 345 bp
ATGATAATGATGATGGAGAAAAAGAAAAAGATGCCGATCTTGGCATGGCTCAGTGCAATATTTGAACAGGGCAGGCTAATTGCTGAAACAGACATTGCCAGACTCCATTTAAAAATTCACTCCTGCAAGCAAGCTCAACGAAACAAGTCCAGAAGGCCGGCAGACCTGTTTGAGTGTAAGATTGATCTGCCGCTGCGTATTTGTGAAATGCTTGGGATGCTTACCACGAAGAATGAAGAGGCATATAGTGGATGCCCTGTAATGTCACTACGTCAGGGTCTATTTAAAGGAGATCAAAGCATTTTATGGGGCGAAATGATGATGCGATCATGGGGAGAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

114

Amino Acids

13.22

Weight (kDa)

9.1

Isoelectric Point (pI)

66.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 191
AcsI RAATTY 1 cut(s) 114
AgsI TTSAA 1 cut(s) 65
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
AoxI GGCC 1 cut(s) 155
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 1 cut(s) 114
BbvI GCAGC 1 cut(s) 180
BccI CCATC 1 cut(s) 7
BisI GCNGC 2 cut(s) 191, 194
BlsI GCNGC 2 cut(s) 192, 195
BmsI GCATC 4 cut(s) 21, 207, 242, 312
BsaBI GATNNNNATC 1 cut(s) 35
Bse118I RCCGGY 1 cut(s) 157
Bse3DI GCAATG 1 cut(s) 93
Bse8I GATNNNNATC 1 cut(s) 35
BseGI GGATG 2 cut(s) 222, 257
BseJI GATNNNNATC 1 cut(s) 35
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 1 cut(s) 64
BseXI GCAGC 1 cut(s) 180
BshFI GGCC 1 cut(s) 157
BsiSI CCGG 1 cut(s) 158
BsnI GGCC 1 cut(s) 157
Bsp143I GATC 4 cut(s) 36, 184, 292, 326
BspACI CCGC 1 cut(s) 191
BspANI GGCC 1 cut(s) 157
BspCNI CTCAG 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 157
BssAI RCCGGY 1 cut(s) 157
BssMI GATC 4 cut(s) 36, 184, 292, 326
Bst6I CTCTTC 1 cut(s) 231
BstC8I GCNNGC 4 cut(s) 74, 128, 132, 159
BstDEI CTNAG 1 cut(s) 50
BstF5I GGATG 2 cut(s) 222, 257
BstKTI GATC 4 cut(s) 39, 187, 295, 329
BstMBI GATC 4 cut(s) 36, 184, 292, 326
BstMWI GCNNNNNNNGC 1 cut(s) 217
BstV1I GCAGC 1 cut(s) 180
BsuRI GGCC 1 cut(s) 157
BtsCI GGATG 2 cut(s) 222, 257
BtsIMutI CAGTG 1 cut(s) 58
Cac8I GCNNGC 4 cut(s) 74, 128, 132, 159
Cfr10I RCCGGY 1 cut(s) 157
CviAII CATG 2 cut(s) 45, 330
CviJI RGCY 4 cut(s) 49, 76, 134, 157
CviKI_1 RGCY 4 cut(s) 49, 76, 134, 157
DdeI CTNAG 1 cut(s) 50
DpnI GATC 4 cut(s) 38, 186, 294, 328
DpnII GATC 4 cut(s) 36, 184, 292, 326
DraI TTTAAA 2 cut(s) 111, 286
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
FaeI CATG 2 cut(s) 48, 333
FaiI YATR 5 cut(s) 46, 244, 246, 307, 331
FatI CATG 2 cut(s) 44, 329
Fnu4HI GCNGC 2 cut(s) 191, 194
FokI GGATG 2 cut(s) 229, 264
Fsp4HI GCNGC 2 cut(s) 191, 194
GluI GCNGC 2 cut(s) 191, 194
HaeIII GGCC 1 cut(s) 157
HapII CCGG 1 cut(s) 158
Hin1II CATG 2 cut(s) 48, 333
HinfI GANTC 1 cut(s) 102
HpaII CCGG 1 cut(s) 158
Hpy188III TCNNGA 1 cut(s) 150
HpyAV CCTTC 1 cut(s) 147
HpyCH4IV ACGT 1 cut(s) 271
HpyCH4V TGCA 2 cut(s) 56, 126
HpyF10VI GCNNNNNNNGC 1 cut(s) 217
HpyF3I CTNAG 1 cut(s) 50
HpySE526I ACGT 1 cut(s) 271
Hsp92II CATG 2 cut(s) 48, 333
KroI GCCGGC 1 cut(s) 157
KroNI GCCGGC 1 cut(s) 159
Kzo9I GATC 4 cut(s) 36, 184, 292, 326
LpnPI CCDG 9 cut(s) 53, 58, 112, 136, 163, 171, 179, 260, 270
Lsp1109I GCAGC 1 cut(s) 180
LweI GCATC 4 cut(s) 21, 207, 242, 312
MaeII ACGT 1 cut(s) 271
MaeIII GTNAC 1 cut(s) 264
MalI GATC 4 cut(s) 38, 186, 294, 328
MboI GATC 4 cut(s) 36, 184, 292, 326
MboII GAAGA 2 cut(s) 241, 248
MluCI AATT 2 cut(s) 78, 114
MlyI GAGTC 1 cut(s) 96
MnlI CCTC 1 cut(s) 232
MroNI GCCGGC 1 cut(s) 157
MseI TTAA 2 cut(s) 110, 285
MspA1I CMGCKG 1 cut(s) 193
MspI CCGG 1 cut(s) 158
MwoI GCNNNNNNNGC 1 cut(s) 217
NaeI GCCGGC 1 cut(s) 159
NdeII GATC 4 cut(s) 36, 184, 292, 326
NgoMIV GCCGGC 1 cut(s) 157
NlaIII CATG 2 cut(s) 48, 333
NmuCI GTSAC 1 cut(s) 264
PdiI GCCGGC 1 cut(s) 159
PkrI GCNGC 2 cut(s) 192, 195
PleI GAGTC 1 cut(s) 96
PpsI GAGTC 1 cut(s) 96
SaqAI TTAA 2 cut(s) 110, 285
SatI GCNGC 2 cut(s) 191, 194
Sau3AI GATC 4 cut(s) 36, 184, 292, 326
SchI GAGTC 1 cut(s) 96
SetI ASST 3 cut(s) 136, 168, 274
SfaNI GCATC 4 cut(s) 21, 207, 242, 312
Sse9I AATT 2 cut(s) 78, 114
SsiI CCGC 1 cut(s) 191
SspI AATATT 1 cut(s) 60
TaiI ACGT 1 cut(s) 274
TasI AATT 2 cut(s) 78, 114
TauI GCSGC 1 cut(s) 193
Tru1I TTAA 2 cut(s) 110, 285
Tru9I TTAA 2 cut(s) 110, 285
TscAI CASTG 1 cut(s) 58
TseFI GTSAC 1 cut(s) 264
TseI GCWGC 1 cut(s) 193
Tsp45I GTSAC 1 cut(s) 264
TspDTI ATGAA 1 cut(s) 249
TspRI CASTG 1 cut(s) 58
XapI RAATTY 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.