Rh7DG212200

N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0001436
Physical Location & Seq
Forward (+)
20458896 .. 20461001
2106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG212200.1

Sequence Viewer

Length: 357 bp
ATGGTTCATACTCACCTTCCAAGGGCGCTTTTCTTGAATGATTCTAATAATGGTGGCAGTGCCAAGACGAGAAATGTGTTGCTGGTTGTTGCCCACGCAGATGATGAGTCCATGTTCTTCACTCCAACAATAAACTACCTCACTTCGAGAGGGCATAATATTCACATCTTATGCTTGTCAAATGGTGATGCAGATGGTAAGGGAAATACCAGAAAAGAAGAGCTCTACCAGGCTTCTGCAATCCTCAAGGTTCCATATCAACATGTGAAAATTCTGGACCATCCAGATCTTCAGGATGGTTTTGGTAAGTTGTGGATCACAATTTATTGGCAAAGATTATTGAAGAGGAAGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
PIG-L

Protein Analysis

118

Amino Acids

13.4

Weight (kDa)

9.13

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIG-L PF02585 27 - 96 5e-15 GlcNAc-PI de-N-acetylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 323
AcsI RAATTY 1 cut(s) 270
AcuI CTGAAG 1 cut(s) 275
AfiI CCNNNNNNNGG 1 cut(s) 22
AflIII ACRYGT 1 cut(s) 262
AgsI TTSAA 2 cut(s) 37, 343
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 1 cut(s) 223
AluI AGCT 1 cut(s) 223
Alw21I GWGCWC 1 cut(s) 225
AlwI GGATC 1 cut(s) 323
ApoI RAATTY 1 cut(s) 270
AspLEI GCGC 1 cut(s) 28
AspS9I GGNCC 1 cut(s) 277
AsuHPI GGTGA 2 cut(s) 5, 197
AvaII GGWCC 1 cut(s) 277
BanII GRGCYC 1 cut(s) 225
Bbv12I GWGCWC 1 cut(s) 225
BccI CCATC 3 cut(s) 188, 288, 290
BciT130I CCWGG 1 cut(s) 230
BfoI RGCGCY 1 cut(s) 29
BglII AGATCT 1 cut(s) 286
Bme1390I CCNGG 1 cut(s) 230
Bme18I GGWCC 1 cut(s) 277
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 1 cut(s) 230
BmsI GCATC 1 cut(s) 178
BpuEI CTTGAG 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 20
Bsc4I CCNNNNNNNGG 1 cut(s) 22
BseBI CCWGG 1 cut(s) 230
BseDI CCNNGG 1 cut(s) 20
BseGI GGATG 2 cut(s) 280, 301
BseLI CCNNNNNNNGG 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 225
BslI CCNNNNNNNGG 1 cut(s) 22
Bsp1286I GDGCHC 1 cut(s) 225
Bsp143I GATC 2 cut(s) 286, 315
BspLI GGNNCC 1 cut(s) 252
BspPI GGATC 1 cut(s) 323
BspQI GCTCTTC 1 cut(s) 213
BssECI CCNNGG 1 cut(s) 20
BssMI GATC 2 cut(s) 286, 315
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 1 cut(s) 230
Bst6I CTCTTC 2 cut(s) 213, 338
BstF5I GGATG 2 cut(s) 280, 301
BstH2I RGCGCY 1 cut(s) 29
BstHHI GCGC 1 cut(s) 28
BstKTI GATC 2 cut(s) 289, 318
BstMBI GATC 2 cut(s) 286, 315
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 228
BstX2I RGATCY 1 cut(s) 286
BstYI RGATCY 1 cut(s) 286
BtsCI GGATG 2 cut(s) 280, 301
BtsI GCAGTG 1 cut(s) 64
BtsIMutI CAGTG 1 cut(s) 64
CfoI GCGC 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 277
CviAII CATG 2 cut(s) 112, 263
CviJI RGCY 2 cut(s) 223, 233
CviKI_1 RGCY 2 cut(s) 223, 233
DpnI GATC 2 cut(s) 288, 317
DpnII GATC 2 cut(s) 286, 315
Eam1104I CTCTTC 2 cut(s) 213, 338
EarI CTCTTC 2 cut(s) 213, 338
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 225
Eco47I GGWCC 1 cut(s) 277
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 1 cut(s) 275
EcoICRI GAGCTC 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 20
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 1 cut(s) 20
FaeI CATG 2 cut(s) 115, 266
FaiI YATR 6 cut(s) 9, 113, 156, 172, 256, 264
FatI CATG 2 cut(s) 111, 262
FokI GGATG 2 cut(s) 267, 308
FriOI GRGCYC 1 cut(s) 225
GlaI GCGC 1 cut(s) 27
HaeII RGCGCY 1 cut(s) 29
HhaI GCGC 1 cut(s) 28
Hin1II CATG 2 cut(s) 115, 266
Hin6I GCGC 1 cut(s) 26
HinP1I GCGC 1 cut(s) 26
HinfI GANTC 2 cut(s) 41, 107
HphI GGTGA 2 cut(s) 5, 197
Hpy188III TCNNGA 5 cut(s) 34, 147, 275, 284, 293
HpyAV CCTTC 1 cut(s) 26
HpyCH4V TGCA 2 cut(s) 191, 239
Hsp92II CATG 2 cut(s) 115, 266
HspAI GCGC 1 cut(s) 26
Kzo9I GATC 2 cut(s) 286, 315
LguI GCTCTTC 1 cut(s) 213
LpnPI CCDG 7 cut(s) 68, 215, 223, 242, 260, 278, 297
LweI GCATC 1 cut(s) 178
MalI GATC 2 cut(s) 288, 317
MboI GATC 2 cut(s) 286, 315
MboII GAAGA 4 cut(s) 109, 230, 281, 355
MflI RGATCY 1 cut(s) 286
MhlI GDGCHC 1 cut(s) 225
MluCI AATT 2 cut(s) 270, 321
MlyI GAGTC 1 cut(s) 116
MmeI TCCRAC 1 cut(s) 149
MnlI CCTC 4 cut(s) 143, 149, 254, 339
MslI CAYNNNNRTG 1 cut(s) 99
MspR9I CCNGG 1 cut(s) 230
MvaI CCWGG 1 cut(s) 230
NdeII GATC 2 cut(s) 286, 315
NlaIII CATG 2 cut(s) 115, 266
NlaIV GGNNCC 1 cut(s) 252
NspI RCATGY 1 cut(s) 266
PciI ACATGT 1 cut(s) 262
PciSI GCTCTTC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 41
PleI GAGTC 1 cut(s) 115
PpsI GAGTC 1 cut(s) 115
PscI ACATGT 1 cut(s) 262
Psp124BI GAGCTC 1 cut(s) 225
Psp6I CCWGG 1 cut(s) 228
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 1 cut(s) 252
PspPI GGNCC 1 cut(s) 277
PsuI RGATCY 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 99
SacI GAGCTC 1 cut(s) 225
SapI GCTCTTC 1 cut(s) 213
Sau3AI GATC 2 cut(s) 286, 315
Sau96I GGNCC 1 cut(s) 277
SchI GAGTC 1 cut(s) 116
ScrFI CCNGG 1 cut(s) 230
SduI GDGCHC 1 cut(s) 225
SetI ASST 4 cut(s) 18, 141, 225, 252
SfaNI GCATC 1 cut(s) 178
SinI GGWCC 1 cut(s) 277
SmiMI CAYNNNNRTG 1 cut(s) 99
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
Sse9I AATT 2 cut(s) 270, 321
SspI AATATT 1 cut(s) 160
SstI GAGCTC 1 cut(s) 225
StyD4I CCNGG 1 cut(s) 228
StyI CCWWGG 1 cut(s) 20
TaqI TCGA 1 cut(s) 146
TasI AATT 2 cut(s) 270, 321
TfiI GAWTC 1 cut(s) 41
TscAI CASTG 1 cut(s) 64
TspRI CASTG 1 cut(s) 64
VpaK11BI GGWCC 1 cut(s) 277
XapI RAATTY 1 cut(s) 270
XceI RCATGY 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.