F-box kelch-repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g18082 FvH4_6g43211 |
| malus_domestica | MD09G1135400.v1.1 MD17G1131100.v1.1 |
| prunus_persica | Prupe.3G191300_v2.0.a1 |
| pyrus_communis | pycom420g00950 |
| rosa_chinensis | RchiOBHm_Chr5g0030151 RchiOBHm_Chr7g0203691 |
| rosa_laevigata | RLG00000005803 RLG00000022101 |
| rosa_multiflora | Rmu_co8245821.1_g000001 Rmu_sc0001707.1_g000011 Rmu_sc0005354.1_g000006 Rmu_sc0005969.1_g000041 Rmu_sc0038336.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00049840 Rroxscaffold_1G00049860 Rroxscaffold_2G00093700 Rroxscaffold_2G00093750 Rroxscaffold_2G00095980 Rroxscaffold_2G00096010 Rroxscaffold_6G00426490 |
| rosa_rugosa | Rorug02G0430700 Rorug02G0447100 Rorug02G0558400 Rorug02G0610800 Rorug05G0117300 |
| rosa_samantha | Rh2AG633400 Rh2BG647000 |
| rosa_wichuraiana | Rw5G019160 Rw5G019190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 231, 244 |
| AcsI | RAATTY | 1 cut(s) | 618 |
| AfaI | GTAC | 1 cut(s) | 408 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 179 |
| AgsI | TTSAA | 3 cut(s) | 19, 134, 579 |
| AluBI | AGCT | 4 cut(s) | 52, 250, 395, 467 |
| AluI | AGCT | 4 cut(s) | 52, 250, 395, 467 |
| Alw21I | GWGCWC | 1 cut(s) | 397 |
| Alw26I | GTCTC | 1 cut(s) | 542 |
| AlwI | GGATC | 2 cut(s) | 231, 244 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 475 |
| ApoI | RAATTY | 1 cut(s) | 618 |
| AspS9I | GGNCC | 1 cut(s) | 521 |
| AvaII | GGWCC | 1 cut(s) | 521 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 177, 210 |
| BamHI | GGATCC | 1 cut(s) | 236 |
| BanII | GRGCYC | 1 cut(s) | 397 |
| BbsI | GAAGAC | 3 cut(s) | 141, 291, 346 |
| Bbv12I | GWGCWC | 1 cut(s) | 397 |
| BcoDI | GTCTC | 1 cut(s) | 542 |
| BfaI | CTAG | 2 cut(s) | 125, 464 |
| Bme18I | GGWCC | 1 cut(s) | 521 |
| BmgT120I | GGNCC | 1 cut(s) | 521 |
| BmiI | GGNNCC | 2 cut(s) | 170, 238 |
| BmsI | GCATC | 1 cut(s) | 19 |
| BpiI | GAAGAC | 3 cut(s) | 141, 291, 346 |
| BpuEI | CTTGAG | 2 cut(s) | 434, 591 |
| Bsa29I | ATCGAT | 1 cut(s) | 561 |
| BsaWI | WCCGGW | 2 cut(s) | 179, 527 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 179 |
| Bse118I | RCCGGY | 1 cut(s) | 152 |
| Bse3DI | GCAATG | 2 cut(s) | 115, 479 |
| BseCI | ATCGAT | 1 cut(s) | 561 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BseMI | GCAATG | 2 cut(s) | 115, 479 |
| BseMII | CTCAG | 2 cut(s) | 90, 482 |
| BsgI | GTGCAG | 1 cut(s) | 392 |
| Bsh1285I | CGRYCG | 1 cut(s) | 561 |
| BshVI | ATCGAT | 1 cut(s) | 561 |
| BsiEI | CGRYCG | 1 cut(s) | 561 |
| BsiHKAI | GWGCWC | 1 cut(s) | 397 |
| BsiSI | CCGG | 4 cut(s) | 153, 180, 485, 528 |
| BslFI | GGGAC | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BsmAI | GTCTC | 1 cut(s) | 542 |
| BsmFI | GGGAC | 1 cut(s) | 45 |
| Bsp1286I | GDGCHC | 1 cut(s) | 397 |
| Bsp143I | GATC | 2 cut(s) | 236, 558 |
| BspCNI | CTCAG | 2 cut(s) | 89, 481 |
| BspDI | ATCGAT | 1 cut(s) | 561 |
| BspLI | GGNNCC | 2 cut(s) | 170, 238 |
| BspPI | GGATC | 2 cut(s) | 231, 244 |
| BspQI | GCTCTTC | 1 cut(s) | 402 |
| BsrDI | GCAATG | 2 cut(s) | 115, 479 |
| BsrFI | RCCGGY | 1 cut(s) | 152 |
| BssAI | RCCGGY | 1 cut(s) | 152 |
| BssMI | GATC | 2 cut(s) | 236, 558 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| Bst6I | CTCTTC | 2 cut(s) | 402, 545 |
| BstC8I | GCNNGC | 3 cut(s) | 154, 375, 379 |
| BstDEI | CTNAG | 2 cut(s) | 76, 468 |
| BstKTI | GATC | 2 cut(s) | 239, 561 |
| BstMAI | GTCTC | 1 cut(s) | 542 |
| BstMBI | GATC | 2 cut(s) | 236, 558 |
| BstMCI | CGRYCG | 1 cut(s) | 561 |
| BstV2I | GAAGAC | 3 cut(s) | 141, 291, 346 |
| BstX2I | RGATCY | 1 cut(s) | 236 |
| BstYI | RGATCY | 1 cut(s) | 236 |
| Bsu15I | ATCGAT | 1 cut(s) | 561 |
| BsuTUI | ATCGAT | 1 cut(s) | 561 |
| BtsI | GCAGTG | 1 cut(s) | 473 |
| BtsIMutI | CAGTG | 2 cut(s) | 189, 473 |
| Cac8I | GCNNGC | 3 cut(s) | 154, 375, 379 |
| CaiI | CAGNNNCTG | 1 cut(s) | 475 |
| Cfr10I | RCCGGY | 1 cut(s) | 152 |
| Cfr13I | GGNCC | 1 cut(s) | 521 |
| ClaI | ATCGAT | 1 cut(s) | 561 |
| Csp6I | GTAC | 1 cut(s) | 407 |
| CviJI | RGCY | 6 cut(s) | 52, 114, 250, 377, 395, 467 |
| CviKI_1 | RGCY | 6 cut(s) | 52, 114, 250, 377, 395, 467 |
| CviQI | GTAC | 1 cut(s) | 407 |
| DdeI | CTNAG | 2 cut(s) | 76, 468 |
| DpnI | GATC | 2 cut(s) | 238, 560 |
| DpnII | GATC | 2 cut(s) | 236, 558 |
| Eam1104I | CTCTTC | 2 cut(s) | 402, 545 |
| EarI | CTCTTC | 2 cut(s) | 402, 545 |
| Ecl136II | GAGCTC | 1 cut(s) | 395 |
| Eco24I | GRGCYC | 1 cut(s) | 397 |
| Eco47I | GGWCC | 1 cut(s) | 521 |
| Eco53kI | GAGCTC | 1 cut(s) | 395 |
| EcoICRI | GAGCTC | 1 cut(s) | 395 |
| EcoT38I | GRGCYC | 1 cut(s) | 397 |
| FaiI | YATR | 7 cut(s) | 36, 121, 166, 258, 270, 583, 590 |
| FaqI | GGGAC | 1 cut(s) | 45 |
| FriOI | GRGCYC | 1 cut(s) | 397 |
| FspBI | CTAG | 2 cut(s) | 125, 464 |
| HapII | CCGG | 4 cut(s) | 153, 180, 485, 528 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 4 cut(s) | 272, 488, 596, 604 |
| HpaII | CCGG | 4 cut(s) | 153, 180, 485, 528 |
| Hpy188I | TCNGA | 4 cut(s) | 42, 79, 241, 471 |
| Hpy188III | TCNNGA | 2 cut(s) | 311, 556 |
| Hpy99I | CGWCG | 2 cut(s) | 146, 245 |
| HpyAV | CCTTC | 3 cut(s) | 343, 357, 586 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 351 |
| HpyCH4V | TGCA | 2 cut(s) | 108, 373 |
| HpyF3I | CTNAG | 2 cut(s) | 76, 468 |
| HpySE526I | ACGT | 1 cut(s) | 351 |
| KroI | GCCGGC | 1 cut(s) | 152 |
| KroNI | GCCGGC | 1 cut(s) | 154 |
| Kzo9I | GATC | 2 cut(s) | 236, 558 |
| LguI | GCTCTTC | 1 cut(s) | 402 |
| LmnI | GCTCC | 1 cut(s) | 392 |
| LpnPI | CCDG | 6 cut(s) | 166, 193, 345, 359, 498, 541 |
| LweI | GCATC | 1 cut(s) | 19 |
| MaeI | CTAG | 2 cut(s) | 125, 464 |
| MaeII | ACGT | 1 cut(s) | 351 |
| MaeIII | GTNAC | 1 cut(s) | 67 |
| MalI | GATC | 2 cut(s) | 238, 560 |
| MboI | GATC | 2 cut(s) | 236, 558 |
| MboII | GAAGA | 5 cut(s) | 146, 296, 346, 389, 532 |
| MflI | RGATCY | 1 cut(s) | 236 |
| MhlI | GDGCHC | 1 cut(s) | 397 |
| MluCI | AATT | 2 cut(s) | 532, 618 |
| MlyI | GAGTC | 1 cut(s) | 598 |
| MmeI | TCCRAC | 2 cut(s) | 264, 516 |
| MnlI | CCTC | 4 cut(s) | 73, 85, 184, 216 |
| MroNI | GCCGGC | 1 cut(s) | 152 |
| MseI | TTAA | 4 cut(s) | 90, 213, 386, 625 |
| MspI | CCGG | 4 cut(s) | 153, 180, 485, 528 |
| NaeI | GCCGGC | 1 cut(s) | 154 |
| NdeII | GATC | 2 cut(s) | 236, 558 |
| NgoMIV | GCCGGC | 1 cut(s) | 152 |
| NlaIV | GGNNCC | 2 cut(s) | 170, 238 |
| PciSI | GCTCTTC | 1 cut(s) | 402 |
| PdiI | GCCGGC | 1 cut(s) | 154 |
| PfeI | GAWTC | 3 cut(s) | 272, 488, 596 |
| Ple19I | CGATCG | 1 cut(s) | 561 |
| PleI | GAGTC | 1 cut(s) | 598 |
| PpsI | GAGTC | 1 cut(s) | 598 |
| Psp124BI | GAGCTC | 1 cut(s) | 397 |
| PspN4I | GGNNCC | 2 cut(s) | 170, 238 |
| PspPI | GGNCC | 1 cut(s) | 521 |
| PstNI | CAGNNNCTG | 1 cut(s) | 475 |
| PsuI | RGATCY | 1 cut(s) | 236 |
| PvuI | CGATCG | 1 cut(s) | 561 |
| RsaI | GTAC | 1 cut(s) | 408 |
| RsaNI | GTAC | 1 cut(s) | 407 |
| SacI | GAGCTC | 1 cut(s) | 397 |
| SapI | GCTCTTC | 1 cut(s) | 402 |
| SaqAI | TTAA | 4 cut(s) | 90, 213, 386, 625 |
| Sau3AI | GATC | 2 cut(s) | 236, 558 |
| Sau96I | GGNCC | 1 cut(s) | 521 |
| SchI | GAGTC | 1 cut(s) | 598 |
| SduI | GDGCHC | 1 cut(s) | 397 |
| SetI | ASST | 8 cut(s) | 54, 77, 208, 252, 297, 354, 397, 469 |
| SfaNI | GCATC | 1 cut(s) | 19 |
| SinI | GGWCC | 1 cut(s) | 521 |
| SmlI | CTYRAG | 2 cut(s) | 413, 606 |
| SmoI | CTYRAG | 2 cut(s) | 413, 606 |
| Sse9I | AATT | 2 cut(s) | 532, 618 |
| SspI | AATATT | 1 cut(s) | 300 |
| SspMI | CTAG | 2 cut(s) | 125, 464 |
| SstI | GAGCTC | 1 cut(s) | 397 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaiI | ACGT | 1 cut(s) | 354 |
| TaqI | TCGA | 2 cut(s) | 310, 561 |
| TasI | AATT | 2 cut(s) | 532, 618 |
| TfiI | GAWTC | 3 cut(s) | 272, 488, 596 |
| Tru1I | TTAA | 4 cut(s) | 90, 213, 386, 625 |
| Tru9I | TTAA | 4 cut(s) | 90, 213, 386, 625 |
| TscAI | CASTG | 2 cut(s) | 196, 480 |
| TspDTI | ATGAA | 4 cut(s) | 297, 389, 471, 605 |
| TspGWI | ACGGA | 2 cut(s) | 198, 513 |
| TspRI | CASTG | 2 cut(s) | 196, 480 |
| VpaK11BI | GGWCC | 1 cut(s) | 521 |
| XapI | RAATTY | 1 cut(s) | 618 |
| XspI | CTAG | 2 cut(s) | 125, 464 |