RchiOBHm_Chr1g0346331

Sterol 3-beta-glucosyltransferase UGT80A2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003962
Physical Location & Seq
Reverse (-)
38467116 .. 38467848
733 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 276 bp
ATGCTTATGTTCTATTGGAAAATAATAAAAACCAAAAGATCTTTTATTTTTATTTTTATGTGGTTTGAAATTATTTTGTGGTCTCTTAATCTTTGCAAATCGTGGTCCAGGGCACTCTCATGTTGCTTAGGCACAAAAATACCGATTCATATATTTTTCACAATGCCATGGACGCCTACCAGTGAATTCCCTCATCCTCTATCCCGTGTCAAGCAACATATTGGATATAGACTATCATATCAAATAGTTGATGCATTAATTTGGCTAGGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_28 UDPGT

Protein Analysis

91

Amino Acids

10.99

Weight (kDa)

9.78

Isoelectric Point (pI)

48.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 185, 270
AcyI GRCGYC 1 cut(s) 173
AgsI TTSAA 1 cut(s) 68
AjnI CCWGG 1 cut(s) 107
Alw26I GTCTC 1 cut(s) 87
ApoI RAATTY 2 cut(s) 185, 270
AseI ATTAAT 1 cut(s) 257
AspS9I GGNCC 1 cut(s) 105
AvaII GGWCC 1 cut(s) 105
BaeGI GKGCMC 1 cut(s) 115
BciT130I CCWGG 1 cut(s) 109
BcoDI GTCTC 1 cut(s) 87
BfaI CTAG 1 cut(s) 266
BglII AGATCT 1 cut(s) 38
Bme1390I CCNGG 1 cut(s) 109
Bme18I GGWCC 1 cut(s) 105
BmgT120I GGNCC 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 109
BmsI GCATC 1 cut(s) 241
Bpu10I CCTNAGC 1 cut(s) 127
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 1 cut(s) 87
BsaJI CCNNGG 2 cut(s) 108, 167
Bse1I ACTGG 1 cut(s) 180
BseBI CCWGG 1 cut(s) 109
BseDI CCNNGG 2 cut(s) 108, 167
BseGI GGATG 1 cut(s) 193
BseNI ACTGG 1 cut(s) 180
BseSI GKGCMC 1 cut(s) 115
BsmAI GTCTC 1 cut(s) 87
Bso31I GGTCTC 1 cut(s) 87
Bsp1286I GDGCHC 1 cut(s) 115
Bsp143I GATC 1 cut(s) 38
Bsp19I CCATGG 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 87
BsrI ACTGG 1 cut(s) 180
BssECI CCNNGG 2 cut(s) 108, 167
BssMI GATC 1 cut(s) 38
BssNI GRCGYC 1 cut(s) 173
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 1 cut(s) 109
BstACI GRCGYC 1 cut(s) 173
BstDEI CTNAG 1 cut(s) 127
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 1 cut(s) 193
BstKTI GATC 1 cut(s) 41
BstMAI GTCTC 1 cut(s) 87
BstMBI GATC 1 cut(s) 38
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstNI CCWGG 1 cut(s) 109
BstSCI CCNGG 1 cut(s) 107
BstSLI GKGCMC 1 cut(s) 115
BstX2I RGATCY 1 cut(s) 38
BstYI RGATCY 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 167
BtsCI GGATG 1 cut(s) 193
BtsIMutI CAGTG 1 cut(s) 187
Cfr13I GGNCC 1 cut(s) 105
CseI GACGC 1 cut(s) 181
CviAII CATG 2 cut(s) 120, 168
CviJI RGCY 1 cut(s) 265
CviKI_1 RGCY 1 cut(s) 265
DdeI CTNAG 1 cut(s) 127
DpnI GATC 1 cut(s) 40
DpnII GATC 1 cut(s) 38
Eco130I CCWWGG 1 cut(s) 167
Eco31I GGTCTC 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 105
EcoRI GAATTC 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 107
EcoT14I CCWWGG 1 cut(s) 167
EcoT22I ATGCAT 1 cut(s) 256
ErhI CCWWGG 1 cut(s) 167
FaeI CATG 2 cut(s) 123, 171
FaiI YATR 9 cut(s) 8, 59, 121, 150, 152, 169, 219, 228, 238
FatI CATG 2 cut(s) 119, 167
FokI GGATG 1 cut(s) 180
FspBI CTAG 1 cut(s) 266
HgaI GACGC 1 cut(s) 181
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 2 cut(s) 123, 171
HinfI GANTC 1 cut(s) 145
HpyCH4V TGCA 2 cut(s) 96, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 1 cut(s) 127
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 2 cut(s) 123, 171
Kzo9I GATC 1 cut(s) 38
LpnPI CCDG 3 cut(s) 94, 121, 193
LweI GCATC 1 cut(s) 241
MaeI CTAG 1 cut(s) 266
MalI GATC 1 cut(s) 40
MboI GATC 1 cut(s) 38
MflI RGATCY 1 cut(s) 38
MhlI GDGCHC 1 cut(s) 115
MluCI AATT 4 cut(s) 69, 185, 258, 270
MnlI CCTC 2 cut(s) 201, 207
Mph1103I ATGCAT 1 cut(s) 256
MseI TTAA 2 cut(s) 87, 257
MslI CAYNNNNRTG 1 cut(s) 118
MspR9I CCNGG 1 cut(s) 109
MvaI CCWGG 1 cut(s) 109
MwoI GCNNNNNNNGC 1 cut(s) 172
NcoI CCATGG 1 cut(s) 167
NdeII GATC 1 cut(s) 38
NlaIII CATG 2 cut(s) 123, 171
NsiI ATGCAT 1 cut(s) 256
PfeI GAWTC 1 cut(s) 145
PshBI ATTAAT 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 107
PspGI CCWGG 1 cut(s) 107
PspPI GGNCC 1 cut(s) 105
PsuI RGATCY 1 cut(s) 38
RseI CAYNNNNRTG 1 cut(s) 118
SaqAI TTAA 2 cut(s) 87, 257
Sau3AI GATC 1 cut(s) 38
Sau96I GGNCC 1 cut(s) 105
ScrFI CCNGG 1 cut(s) 109
SduI GDGCHC 1 cut(s) 115
SfaNI GCATC 1 cut(s) 241
SgeI CNNG 9 cut(s) 114, 120, 121, 132, 180, 192, 216, 218, 223
SinI GGWCC 1 cut(s) 105
SmiMI CAYNNNNRTG 1 cut(s) 118
Sse9I AATT 4 cut(s) 69, 185, 258, 270
SspMI CTAG 1 cut(s) 266
StyD4I CCNGG 1 cut(s) 107
StyI CCWWGG 1 cut(s) 167
TasI AATT 4 cut(s) 69, 185, 258, 270
TfiI GAWTC 1 cut(s) 145
Tru1I TTAA 2 cut(s) 87, 257
Tru9I TTAA 2 cut(s) 87, 257
TscAI CASTG 1 cut(s) 187
TspDTI ATGAA 1 cut(s) 137
TspRI CASTG 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 105
VspI ATTAAT 1 cut(s) 257
XapI RAATTY 2 cut(s) 185, 270
XspI CTAG 1 cut(s) 266
Zsp2I ATGCAT 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.