Rorug02G0478600

Belongs to the universal ribosomal protein uL22 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
60985683 .. 60992117
6435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0478600.1

Sequence Viewer

Length: 3288 bp
ATGGCGGCAGCTGATGTTGCTCAATTTCTGTGGAAAAAGTTCTTGAGGTCTCTAGTGGACGCAGAGTCTGAATTATCAGGTTCTATGAGTCTCTTTTCTTACTTCGTAGCAATCAAACATATCTTAGTAAACATGCAGATAAATCCATTTTCTTTAGAAATGTTGATGCCAAGGAATGCATCATGGGAAGTGAATACTTATGTTCGGGCAAATACTTATCTCTCGGAGCTCAACTATGCATTGGCAGAGTGCCAAATCTTTGCAAAGGAGTGCAGGGAGCTTAAAAAGAAGATTTTACCGTTGAATCCTTCCGCTGTTTTTTTCATCCTACAGATGAAGAAGAGGCTGATGACACTGAGAAGGAAGTTTGAGACTTTGGTGCTTGAGAGCCCATCAATATCTACTTCTATCTTGAGGGAGGGAAAAGGGAGAAACTCTGTGGAATGTTTGGGATTTACTGAGAAGGATATAGTGGTGTTAAAGAAGAATTCAGAAGAAACTGTGGTGTTTTCTGATGCAATGAATTCAGAAGACTTTACAACTATGGTTGAGCTCTTGGGCTTGCTTGGTGGCTCTGCAGCTGGAATTGGATTTACTTCCATTGGGATTGTCGGCATGGCTGGCGTGGGTAAGTCCATTTTAGTACAAAGACTTGTGGAAGAGACAGCTGTGCTCTCTGAGTTTTCTCCTATCATTCAGTTATGCTTGTCTGATATAATACAAGAACATAATGTTGTAGACAACACTAATAGTGCCAGTGGGGCCAGCATTAGCATCAGTATTGTGAAACTTATACTTGTAAAGTTGGGGGAGGAGGAGACTGCCGGTATTTCTGGCCTTGAACTTAATTCGCTCTTGGAAAGGCTCAACCACCTTTTATCAGGTAAAAAGTATTTAATTGTGTTGGATGATGTGTGGCATAATATGGAGTTCTATAGGGACCTTGGCTATCAGCTTCCTGATGGTGAGAAATTTGGGGATCGGTTATCTGATGGGTTGCCTAAGGATGGTGGTGGTGCAGTCATTGTGGTTAGTAGGATACCAGAAGTGGCTCTAGATATGGTGGGGATATGCCAAAGTACTCTGCATAAGCGGCTGACCATGCTCAAAAGGAAGTCTGCAGTCTCCAGTCTGGTGCATGAACAGCAAAAACACCAAACACCTATATCTAACACACCCAGCCCATCAATCTCTACACCAAAAGAGAAGACCAGTGTGGCAGAAGAATGTTTGCCATTTGCTGAGAAGGTAAAGAACATTTCAAGTGAAAACGTGCCACTTCTTAATGTAGGGATATATAGTGAATTTAAGGACTCCCGCATGCTTGTTGGTGATCCAACTGGAACTGGATTTACAGCAATTGGGATAGTTGGCATGGCTGGCGTCGGTAAGTCCACTTTTGTGCACAATGTCTTGAAAACCGTGTGGTCTGAATATGATCCCATAGTTTGGTTATGCTTGTCGGATATAATCAAAGGTAGAAAACAAGGACCAAATGTCACTGCCAGTCATGAGGTGATCAGCATTAGCATTGTGGCATGTATCCTCGAAATGTTGGGGATTTCCATAGCTAGGCAAGACCTTGGCATTGCCGAGCTCTTGGAAAGGCTAAATCATATTTTATCGGGTAAACGGTATTTGATTGTGTTGGATGATGTGTGGGACATTATGGAGTTCTGTTCAGATTTATCTTATAAGTTACCCGAAGGTGAGAAAATTGGGGATCAGTTATCTCAAGGATTGCCCAAGGACTGTGGTGGTACGGTCATTGTCACTAGTAGGATAACTGAAGTGGCTCAACATATGGTTGGCTTGGGCCAAAATAACTTGTTTCTTGTTACGCCTTGGGACAGAGGACAGTGCTTGTTATACTTCGACAGCTTTATCTTCCATGAAAGATTACGGTGTGGTAAAGAAAAACGTTTTGGCGTGTCAAATACAGAAACTGTGAGAAAGGTCCATAATGAAATCCTGGATCAAGTTTGTGGTCTGCCATTAATGGTCAAAACTCTCGCATACTTAATCTTTGAAAACCAGATCAGTCAGAATGATTATAGTAGGTCTGCCCTGAAGAAGATGTTGATACCTCGTGAATTTCTTATTGATTGTTCATGGGAGTATGTTCCGATCAATGAAAGAAATTTCGACTGGGCTCATGATAAAATGGACATGCCAAAATGCCCAGTTTTTGTGTTTATTGATTTCCAAAGCAACCTTATAGGAGCTCTAGCTGAAGATTTTCGCTACCAGCTTAATCGTGTGCAGGTTCTTTCTGTGTTACATGAGAGTTTCATTACGCGAAGATGTTCGCCAATGAAACCAGAAAGGGCGTTAGAGGAGTTTTATGGTTCTCTAGCAAAGCTTAAGGGTGAAGGACATGATTTTGCTGATGAAATTCAAAAGAAGATGACATTTATAATTGTTGGTGGAGATGTTTTTGTTAACTGGTTTTTAGGAGTTTTATGCGATCTAAAATTGCCAGACTCACCCTCCATTGTTCCCATTGCACTCGGAATCAAAAGTAACATTCCATTTTCGTTTGGATGGGAATTTGATGCAATGAAACCAGTGAACAAGATATTGGAGACAGTTCTAAATCATACAAAACATATCAAAACAGATAGCTGGCATATCCTCATCAAGATGGAAGCCGCCATTCCTACAGATTATCAAGAAATACCATATTGTTTGCAGTTATGTCATCCAGTTCACAAACCAAATATGGAAAATGTGGATAACCAGCCATTAATCCGTGGAGAATTTTGGAACTACTTCAGCTTTGGTGTTGACGATCCAAGATTGTATGGAGCTTTGCGCTTTCGCCACATTTCAAGGACCTTAAACAGGTTACTTGCAAAAGTAGAGGTTTTGAAACATCACGGTGATCAGTGGAAAACGCTTAGCATACCTAGTAGCATCAGGTCAATTGTTTGTCTTAACTTGCCTAGCTTTGTTGGCGGACTAAATCCTTGGTCAAAAGCAAATGTGAAGAAAGATCAAAGTATAGACTTGACCCCATCTTTGATAGATGATGGCCGTCTTGAAATTATTGGTTCCAGAGATGATTTGCTTTGTCCGAAGAAAAGGTGGATTCGCCTTGATCAGGTACGAGAAATTCGCTTCAAGTTTATTGGGGACTCAGCTGAGGTTATAAACATGATGATCGATGGAGTACCGTTGAAAAAATCCCCACTTGATGGGTTAGATGCGATTGAAATCTCTTACCACCGTCAAGTCAACATTCTTGTTGAACAAAATTACTCAGCAAAAAGTATCCACGACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1095

Amino Acids

123.0

Weight (kDa)

6.16

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 200 - 323 2.9e-11 NB-ARC domain
NB-ARC PF00931 451 - 604 3.5e-13 NB-ARC domain
DAGK_acc PF00609 953 - 1057 1.8e-09 Diacylglycerol kinase accessory domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1695, 2417, 3152
Acc36I ACCTGC 1 cut(s) 2254
AccB7I CCANNNNNTGG 2 cut(s) 1449, 3197
AccI GTMKAC 1 cut(s) 738
AccII CGCG 1 cut(s) 2299
AciI CCGC 6 cut(s) 5, 312, 1093, 1318, 2652, 2958
AclI AACGTT 1 cut(s) 1921
AclWI GGATC 6 cut(s) 987, 1328, 1433, 1731, 1983, 2786
AcoI YGGCCR 1 cut(s) 3034
AcuI CTGAAG 4 cut(s) 1809, 2090, 2253, 2758
AcyI GRCGYC 1 cut(s) 1383
AfaI GTAC 5 cut(s) 645, 1081, 1762, 3108, 3174
AfiI CCNNNNNNNGG 6 cut(s) 1007, 1449, 1572, 2844, 3103, 3197
AflII CTTAAG 1 cut(s) 2363
AhdI GACNNNNNGTC 2 cut(s) 64, 1496
AhlI ACTAGT 1 cut(s) 1775
AjnI CCWGG 1 cut(s) 1971
AjuI GAANNNNNNNTTGG 4 cut(s) 1908, 1940, 2564, 2596
AleI CACNNNNGTG 1 cut(s) 1400
Alw21I GWGCWC 6 cut(s) 231, 555, 675, 1407, 1599, 2227
Alw26I GTCTC 7 cut(s) 54, 95, 365, 656, 812, 1129, 2579
Alw44I GTGCAC 1 cut(s) 1403
AlwI GGATC 6 cut(s) 987, 1328, 1433, 1731, 1983, 2786
AlwNI CAGNNNCTG 2 cut(s) 68, 1946
AoxI GGCC 4 cut(s) 762, 835, 1816, 3034
ApaLI GTGCAC 1 cut(s) 1403
ApeKI GCWGC 2 cut(s) 8, 578
ArsI GACNNNNNNTTYG 2 cut(s) 3004, 3036
AseI ATTAAT 2 cut(s) 1997, 2747
Asp700I GAANNNNTTC 4 cut(s) 38, 2238, 2305, 2771
AspLEI GCGC 1 cut(s) 2817
AspS9I GGNCC 6 cut(s) 762, 940, 1490, 1816, 1957, 2835
AsuHPI GGTGA 7 cut(s) 977, 1343, 1528, 1721, 2381, 2478, 2894
AvaII GGWCC 4 cut(s) 940, 1490, 1957, 2835
AxyI CCTNAGG 1 cut(s) 1002
BaeGI GKGCMC 1 cut(s) 1407
BanII GRGCYC 6 cut(s) 231, 392, 555, 1599, 2155, 2227
BauI CACGAG 1 cut(s) 2088
BbsI GAAGAC 2 cut(s) 537, 1214
Bbv12I GWGCWC 6 cut(s) 231, 555, 675, 1407, 1599, 2227
BbvCI CCTCAGC 1 cut(s) 3144
BbvI GCAGC 2 cut(s) 20, 590
BceAI ACGGC 1 cut(s) 3021
BciT130I CCWGG 1 cut(s) 1973
BciVI GTATCC 3 cut(s) 1032, 1553, 3284
BclI TGATCA 3 cut(s) 1518, 2884, 3100
BcoDI GTCTC 7 cut(s) 54, 95, 365, 656, 812, 1129, 2579
BcuI ACTAGT 1 cut(s) 1775
BfaI CTAG 8 cut(s) 53, 1055, 1572, 1776, 2228, 2354, 2910, 2946
BfmI CTRYAG 5 cut(s) 329, 576, 934, 1119, 2661
BfrI CTTAAG 1 cut(s) 2363
BfuAI ACCTGC 1 cut(s) 2254
BfuI GTATCC 3 cut(s) 1032, 1553, 3284
BglI GCCNNNNNGGC 1 cut(s) 761
BisI GCNGC 5 cut(s) 6, 9, 579, 1094, 2652
BlpI GCTNAGC 1 cut(s) 2900
BlsI GCNGC 5 cut(s) 7, 10, 580, 1095, 2653
BmcAI AGTACT 1 cut(s) 1081
Bme1390I CCNGG 1 cut(s) 1973
Bme18I GGWCC 4 cut(s) 940, 1490, 1957, 2835
BmeRI GACNNNNNGTC 2 cut(s) 64, 1496
BmgT120I GGNCC 6 cut(s) 762, 940, 1490, 1816, 1957, 2835
BmiI GGNNCC 3 cut(s) 763, 941, 3055
BmrFI CCNGG 1 cut(s) 1973
BmrI ACTGGG 2 cut(s) 2158, 2177
BmsI GCATC 7 cut(s) 156, 188, 505, 783, 2545, 2925, 3196
BmuI ACTGGG 2 cut(s) 2158, 2177
BpiI GAAGAC 2 cut(s) 537, 1214
BpmI CTGGAG 1 cut(s) 1111
Bpu10I CCTNAGC 1 cut(s) 3144
Bpu1102I GCTNAGC 1 cut(s) 2900
BpuEI CTTGAG 4 cut(s) 64, 404, 433, 1719
Bsa29I ATCGAT 1 cut(s) 3165
BsaBI GATNNNNATC 1 cut(s) 3215
BsaHI GRCGYC 1 cut(s) 1383
BsaI GGTCTC 1 cut(s) 54
BsaJI CCNNGG 7 cut(s) 170, 943, 1582, 1746, 1844, 2752, 2969
BsaXI ACNNNNNCTCC 2 cut(s) 2474, 2504
Bsc4I CCNNNNNNNGG 6 cut(s) 1007, 1449, 1572, 2844, 3103, 3197
Bse118I RCCGGY 1 cut(s) 824
Bse21I CCTNAGG 1 cut(s) 1002
Bse3DI GCAATG 4 cut(s) 525, 1587, 2502, 2565
Bse8I GATNNNNATC 1 cut(s) 3215
BseBI CCWGG 1 cut(s) 1973
BseCI ATCGAT 1 cut(s) 3165
BseDI CCNNGG 7 cut(s) 170, 943, 1582, 1746, 1844, 2752, 2969
BseGI GGATG 6 cut(s) 324, 913, 1012, 1657, 2549, 2701
BseJI GATNNNNATC 1 cut(s) 3215
BseLI CCNNNNNNNGG 6 cut(s) 1007, 1449, 1572, 2844, 3103, 3197
BseMI GCAATG 4 cut(s) 525, 1587, 2502, 2565
BseMII CTCAG 7 cut(s) 347, 450, 669, 1233, 3135, 3153, 3276
BseRI GAGGAG 3 cut(s) 827, 830, 2351
BseSI GKGCMC 1 cut(s) 1407
BseXI GCAGC 2 cut(s) 20, 590
BseYI CCCAGC 1 cut(s) 1178
BsgI GTGCAG 3 cut(s) 292, 1038, 2282
Bsh1236I CGCG 1 cut(s) 2299
BshFI GGCC 4 cut(s) 764, 837, 1818, 3036
BshVI ATCGAT 1 cut(s) 3165
BsiHKAI GWGCWC 6 cut(s) 231, 555, 675, 1407, 1599, 2227
BsiSI CCGG 1 cut(s) 825
BslFI GGGAC 4 cut(s) 953, 1676, 1862, 3149
BslI CCNNNNNNNGG 6 cut(s) 1007, 1449, 1572, 2844, 3103, 3197
BsmAI GTCTC 7 cut(s) 54, 95, 365, 656, 812, 1129, 2579
BsmFI GGGAC 4 cut(s) 953, 1676, 1862, 3149
BsmI GAATGC 1 cut(s) 181
BsnI GGCC 4 cut(s) 764, 837, 1818, 3036
Bso31I GGTCTC 1 cut(s) 54
Bsp1286I GDGCHC 8 cut(s) 231, 392, 555, 675, 1407, 1599, 2155, 2227
Bsp1720I GCTNAGC 1 cut(s) 2900
BspACI CCGC 6 cut(s) 5, 312, 1093, 1318, 2652, 2958
BspANI GGCC 4 cut(s) 764, 837, 1818, 3036
BspCNI CTCAG 7 cut(s) 348, 451, 670, 1234, 3136, 3152, 3275
BspDI ATCGAT 1 cut(s) 3165
BspFNI CGCG 1 cut(s) 2299
BspHI TCATGA 2 cut(s) 1510, 2155
BspLI GGNNCC 3 cut(s) 763, 941, 3055
BspMAI CTGCAG 2 cut(s) 580, 1123
BspMI ACCTGC 1 cut(s) 2254
BspPI GGATC 6 cut(s) 987, 1328, 1433, 1731, 1983, 2786
BspTI CTTAAG 1 cut(s) 2363
BspTNI GGTCTC 1 cut(s) 54
BsrDI GCAATG 4 cut(s) 525, 1587, 2502, 2565
BsrFI RCCGGY 1 cut(s) 824
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 7 cut(s) 170, 943, 1582, 1746, 1844, 2752, 2969
BssNI GRCGYC 1 cut(s) 1383
BssSI CACGAG 1 cut(s) 2088
BssT1I CCWWGG 6 cut(s) 170, 943, 1582, 1746, 1844, 2969
Bst2BI CACGAG 1 cut(s) 2088
Bst2UI CCWGG 1 cut(s) 1973
Bst6I CTCTTC 2 cut(s) 335, 654
BstACI GRCGYC 1 cut(s) 1383
BstAFI CTTAAG 1 cut(s) 2363
BstC8I GCNNGC 6 cut(s) 563, 622, 766, 1322, 1381, 2627
BstDSI CCRYGG 1 cut(s) 2752
BstENI CCTNNNNNAGG 2 cut(s) 2842, 3101
BstF5I GGATG 6 cut(s) 324, 913, 1012, 1657, 2549, 2701
BstFNI CGCG 1 cut(s) 2299
BstHHI GCGC 1 cut(s) 2817
BstMAI GTCTC 7 cut(s) 54, 95, 365, 656, 812, 1129, 2579
BstMWI GCNNNNNNNGC 8 cut(s) 17, 621, 761, 1093, 1102, 1144, 1380, 2955
BstNI CCWGG 1 cut(s) 1973
BstNSI RCATGY 4 cut(s) 136, 1324, 1542, 2173
BstSCI CCNGG 1 cut(s) 1971
BstSFI CTRYAG 5 cut(s) 329, 576, 934, 1119, 2661
BstSLI GKGCMC 1 cut(s) 1407
BstUI CGCG 1 cut(s) 2299
BstV1I GCAGC 2 cut(s) 20, 590
BstV2I GAAGAC 2 cut(s) 537, 1214
Bsu15I ATCGAT 1 cut(s) 3165
Bsu36I CCTNAGG 1 cut(s) 1002
BsuI GTATCC 3 cut(s) 1032, 1553, 3284
BsuRI GGCC 4 cut(s) 764, 837, 1818, 3036
BsuTUI ATCGAT 1 cut(s) 3165
BtgI CCRYGG 1 cut(s) 2752
BtsCI GGATG 6 cut(s) 324, 913, 1012, 1657, 2549, 2701
BtsI GCAGTG 1 cut(s) 1500
BtsIMutI CAGTG 7 cut(s) 353, 763, 1219, 1500, 1865, 2574, 2894
BveI ACCTGC 1 cut(s) 2254
Cac8I GCNNGC 6 cut(s) 563, 622, 766, 1322, 1381, 2627
CaiI CAGNNNCTG 2 cut(s) 68, 1946
CciI TCATGA 2 cut(s) 1510, 2155
CfoI GCGC 1 cut(s) 2817
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 6 cut(s) 762, 940, 1490, 1816, 1957, 2835
ClaI ATCGAT 1 cut(s) 3165
CseI GACGC 2 cut(s) 68, 1372
Csp6I GTAC 5 cut(s) 644, 1080, 1761, 3107, 3173
CspCI CAANNNNNGTGG 4 cut(s) 11, 46, 1735, 1770
CviQI GTAC 5 cut(s) 644, 1080, 1761, 3107, 3173
DriI GACNNNNNGTC 2 cut(s) 64, 1496
EaeI YGGCCR 1 cut(s) 3034
Eam1104I CTCTTC 2 cut(s) 335, 654
Eam1105I GACNNNNNGTC 2 cut(s) 64, 1496
EarI CTCTTC 2 cut(s) 335, 654
EciI GGCGGA 1 cut(s) 2973
Ecl136II GAGCTC 4 cut(s) 229, 553, 1597, 2225
Eco130I CCWWGG 6 cut(s) 170, 943, 1582, 1746, 1844, 2969
Eco24I GRGCYC 6 cut(s) 231, 392, 555, 1599, 2155, 2227
Eco31I GGTCTC 1 cut(s) 54
Eco47I GGWCC 4 cut(s) 940, 1490, 1957, 2835
Eco53kI GAGCTC 4 cut(s) 229, 553, 1597, 2225
Eco57I CTGAAG 4 cut(s) 1809, 2090, 2253, 2758
Eco81I CCTNAGG 1 cut(s) 1002
EcoICRI GAGCTC 4 cut(s) 229, 553, 1597, 2225
EcoNI CCTNNNNNAGG 2 cut(s) 2842, 3101
EcoO109I RGGNCCY 2 cut(s) 940, 2835
EcoRI GAATTC 2 cut(s) 487, 523
EcoRII CCWGG 1 cut(s) 1971
EcoT14I CCWWGG 6 cut(s) 170, 943, 1582, 1746, 1844, 2969
EcoT22I ATGCAT 2 cut(s) 181, 241
EcoT38I GRGCYC 6 cut(s) 231, 392, 555, 1599, 2155, 2227
ErhI CCWWGG 6 cut(s) 170, 943, 1582, 1746, 1844, 2969
FaqI GGGAC 4 cut(s) 953, 1676, 1862, 3149
FauI CCCGC 1 cut(s) 1325
FauNDI CATATG 1 cut(s) 1803
FbaI TGATCA 3 cut(s) 1518, 2884, 3100
FblI GTMKAC 1 cut(s) 738
Fnu4HI GCNGC 5 cut(s) 6, 9, 579, 1094, 2652
FokI GGATG 6 cut(s) 311, 920, 1019, 1664, 2556, 2688
FriOI GRGCYC 6 cut(s) 231, 392, 555, 1599, 2155, 2227
Fsp4HI GCNGC 5 cut(s) 6, 9, 579, 1094, 2652
FspBI CTAG 8 cut(s) 53, 1055, 1572, 1776, 2228, 2354, 2910, 2946
GlaI GCGC 1 cut(s) 2816
GluI GCNGC 5 cut(s) 6, 9, 579, 1094, 2652
GsaI CCCAGC 1 cut(s) 1182
GsuI CTGGAG 1 cut(s) 1111
HaeIII GGCC 4 cut(s) 764, 837, 1818, 3036
HapII CCGG 1 cut(s) 825
HgaI GACGC 2 cut(s) 68, 1372
HhaI GCGC 1 cut(s) 2817
Hin1I GRCGYC 1 cut(s) 1383
Hin6I GCGC 1 cut(s) 2815
HinP1I GCGC 1 cut(s) 2815
HincII GTYRAC 3 cut(s) 2443, 2788, 3238
HindII GTYRAC 3 cut(s) 2443, 2788, 3238
HindIII AAGCTT 1 cut(s) 2360
HinfI GANTC 9 cut(s) 65, 88, 304, 1313, 2483, 2514, 3091, 3137, 3281
HpaI GTTAAC 1 cut(s) 2443
HpaII CCGG 1 cut(s) 825
HphI GGTGA 7 cut(s) 977, 1343, 1528, 1721, 2381, 2478, 2894
Hpy99I CGWCG 1 cut(s) 1388
HpyAV CCTTC 6 cut(s) 318, 354, 457, 1240, 1700, 2366
HpyCH4IV ACGT 2 cut(s) 1272, 1921
HpyF10VI GCNNNNNNNGC 8 cut(s) 17, 621, 761, 1093, 1102, 1144, 1380, 2955
HpySE526I ACGT 2 cut(s) 1272, 1921
Hsp92I GRCGYC 1 cut(s) 1383
HspAI GCGC 1 cut(s) 2815
Ksp22I TGATCA 3 cut(s) 1518, 2884, 3100
KspAI GTTAAC 1 cut(s) 2443
LmnI GCTCC 4 cut(s) 226, 277, 2222, 2807
Lsp1109I GCAGC 2 cut(s) 20, 590
LweI GCATC 7 cut(s) 156, 188, 505, 783, 2545, 2925, 3196
MaeI CTAG 8 cut(s) 53, 1055, 1572, 1776, 2228, 2354, 2910, 2946
MaeII ACGT 2 cut(s) 1272, 1921
MaeIII GTNAC 7 cut(s) 1498, 1698, 1771, 1837, 2277, 2522, 2847
MfeI CAATTG 2 cut(s) 1359, 2925
MhlI GDGCHC 8 cut(s) 231, 392, 555, 675, 1407, 1599, 2155, 2227
MlyI GAGTC 6 cut(s) 74, 97, 1307, 2477, 3131, 3275
MmeI TCCRAC 4 cut(s) 885, 1361, 1443, 1629
Mph1103I ATGCAT 2 cut(s) 181, 241
MroXI GAANNNNTTC 4 cut(s) 38, 2238, 2305, 2771
MslI CAYNNNNRTG 3 cut(s) 1400, 2642, 2880
MspA1I CMGCKG 5 cut(s) 11, 314, 581, 668, 3143
MspCI CTTAAG 1 cut(s) 2363
MspI CCGG 1 cut(s) 825
MspR9I CCNGG 1 cut(s) 1973
MunI CAATTG 2 cut(s) 1359, 2925
Mva1269I GAATGC 1 cut(s) 181
MvaI CCWGG 1 cut(s) 1973
MvnI CGCG 1 cut(s) 2299
MwoI GCNNNNNNNGC 8 cut(s) 17, 621, 761, 1093, 1102, 1144, 1380, 2955
NdeI CATATG 1 cut(s) 1803
NlaIV GGNNCC 3 cut(s) 763, 941, 3055
NmeAIII GCCGAG 1 cut(s) 1618
NmuCI GTSAC 2 cut(s) 1498, 1771
NsiI ATGCAT 2 cut(s) 181, 241
NspI RCATGY 4 cut(s) 136, 1324, 1542, 2173
OliI CACNNNNGTG 1 cut(s) 1400
PaeI GCATGC 1 cut(s) 1324
PagI TCATGA 2 cut(s) 1510, 2155
PctI GAATGC 1 cut(s) 181
PdmI GAANNNNTTC 4 cut(s) 38, 2238, 2305, 2771
PfeI GAWTC 3 cut(s) 304, 2514, 3091
PflMI CCANNNNNTGG 2 cut(s) 1449, 3197
PfoI TCCNGGA 1 cut(s) 1971
PkrI GCNGC 5 cut(s) 7, 10, 580, 1095, 2653
PleI GAGTC 6 cut(s) 73, 96, 1307, 2477, 3131, 3275
PpsI GAGTC 6 cut(s) 73, 96, 1307, 2477, 3131, 3275
PpuMI RGGWCCY 2 cut(s) 940, 2835
PshBI ATTAAT 2 cut(s) 1997, 2747
PsiI TTATAA 3 cut(s) 1695, 2417, 3152
Psp124BI GAGCTC 4 cut(s) 231, 555, 1599, 2227
Psp1406I AACGTT 1 cut(s) 1921
Psp5II RGGWCCY 2 cut(s) 940, 2835
Psp6I CCWGG 1 cut(s) 1971
PspFI CCCAGC 1 cut(s) 1178
PspGI CCWGG 1 cut(s) 1971
PspN4I GGNNCC 3 cut(s) 763, 941, 3055
PspPI GGNCC 6 cut(s) 762, 940, 1490, 1816, 1957, 2835
PspPPI RGGWCCY 2 cut(s) 940, 2835
PsrI GAACNNNNNNTAC 2 cut(s) 1336, 1368
PstI CTGCAG 2 cut(s) 580, 1123
PstNI CAGNNNCTG 2 cut(s) 68, 1946
PvuII CAGCTG 4 cut(s) 11, 581, 668, 3143
RsaI GTAC 5 cut(s) 645, 1081, 1762, 3108, 3174
RsaNI GTAC 5 cut(s) 644, 1080, 1761, 3107, 3173
RseI CAYNNNNRTG 3 cut(s) 1400, 2642, 2880
SacI GAGCTC 4 cut(s) 231, 555, 1599, 2227
SatI GCNGC 5 cut(s) 6, 9, 579, 1094, 2652
Sau96I GGNCC 6 cut(s) 762, 940, 1490, 1816, 1957, 2835
ScaI AGTACT 1 cut(s) 1081
SchI GAGTC 6 cut(s) 74, 97, 1307, 2477, 3131, 3275
ScrFI CCNGG 1 cut(s) 1973
SduI GDGCHC 8 cut(s) 231, 392, 555, 675, 1407, 1599, 2155, 2227
SfaNI GCATC 7 cut(s) 156, 188, 505, 783, 2545, 2925, 3196
SfcI CTRYAG 5 cut(s) 329, 576, 934, 1119, 2661
SinI GGWCC 4 cut(s) 940, 1490, 1957, 2835
SmiMI CAYNNNNRTG 3 cut(s) 1400, 2642, 2880
SmlI CTYRAG 5 cut(s) 43, 383, 412, 1734, 2363
SmoI CTYRAG 5 cut(s) 43, 383, 412, 1734, 2363
SpeI ACTAGT 1 cut(s) 1775
SphI GCATGC 1 cut(s) 1324
SsiI CCGC 6 cut(s) 5, 312, 1093, 1318, 2652, 2958
SspMI CTAG 8 cut(s) 53, 1055, 1572, 1776, 2228, 2354, 2910, 2946
SstI GAGCTC 4 cut(s) 231, 555, 1599, 2227
StyD4I CCNGG 1 cut(s) 1971
StyI CCWWGG 6 cut(s) 170, 943, 1582, 1746, 1844, 2969
TaiI ACGT 2 cut(s) 1275, 1924
TaqI TCGA 4 cut(s) 1548, 1875, 2145, 3165
TatI WGTACW 2 cut(s) 643, 1079
TauI GCSGC 3 cut(s) 8, 1096, 2654
TfiI GAWTC 3 cut(s) 304, 2514, 3091
TscAI CASTG 7 cut(s) 360, 763, 1219, 1507, 1865, 2574, 2894
TseFI GTSAC 2 cut(s) 1498, 1771
TseI GCWGC 2 cut(s) 8, 578
Tsp45I GTSAC 2 cut(s) 1498, 1771
TspGWI ACGGA 1 cut(s) 2741
TspRI CASTG 7 cut(s) 360, 763, 1219, 1507, 1865, 2574, 2894
Van91I CCANNNNNTGG 2 cut(s) 1449, 3197
Vha464I CTTAAG 1 cut(s) 2363
VneI GTGCAC 1 cut(s) 1403
VpaK11BI GGWCC 4 cut(s) 940, 1490, 1957, 2835
VspI ATTAAT 2 cut(s) 1997, 2747
XagI CCTNNNNNAGG 2 cut(s) 2842, 3101
XbaI TCTAGA 1 cut(s) 1054
XceI RCATGY 4 cut(s) 136, 1324, 1542, 2173
XmiI GTMKAC 1 cut(s) 738
XmnI GAANNNNTTC 4 cut(s) 38, 2238, 2305, 2771
XspI CTAG 8 cut(s) 53, 1055, 1572, 1776, 2228, 2354, 2910, 2946
ZrmI AGTACT 1 cut(s) 1081
Zsp2I ATGCAT 2 cut(s) 181, 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.