Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RVT | PF13966 | 308 - 391 | 1.4e-19 | zinc-binding in reverse transcriptase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 588 |
| AarI | CACCTGC | 1 cut(s) | 838 |
| Acc36I | ACCTGC | 2 cut(s) | 242, 838 |
| AccB1I | GGYRCC | 2 cut(s) | 1495, 1631 |
| AccBSI | CCGCTC | 1 cut(s) | 852 |
| AccI | GTMKAC | 1 cut(s) | 1296 |
| AciI | CCGC | 4 cut(s) | 197, 850, 1448, 1529 |
| AclWI | GGATC | 7 cut(s) | 362, 374, 387, 944, 1174, 1187, 1568 |
| AcoI | YGGCCR | 4 cut(s) | 25, 163, 626, 790 |
| AcsI | RAATTY | 4 cut(s) | 19, 799, 1047, 1552 |
| AcuI | CTGAAG | 2 cut(s) | 1052, 1177 |
| AcyI | GRCGYC | 1 cut(s) | 908 |
| AfaI | GTAC | 5 cut(s) | 261, 427, 1081, 1216, 1286 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 886, 962 |
| AflII | CTTAAG | 1 cut(s) | 614 |
| AjiI | CACGTC | 1 cut(s) | 825 |
| AjnI | CCWGG | 3 cut(s) | 27, 961, 1210 |
| AluBI | AGCT | 9 cut(s) | 217, 265, 622, 813, 862, 1292, 1355, 1622, 1649 |
| AluI | AGCT | 9 cut(s) | 217, 265, 622, 813, 862, 1292, 1355, 1622, 1649 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Alw26I | GTCTC | 1 cut(s) | 54 |
| AlwI | GGATC | 7 cut(s) | 362, 374, 387, 944, 1174, 1187, 1568 |
| AoxI | GGCC | 7 cut(s) | 25, 163, 320, 327, 626, 790, 964 |
| ApoI | RAATTY | 4 cut(s) | 19, 799, 1047, 1552 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 645, 1541 |
| AspLEI | GCGC | 1 cut(s) | 944 |
| AspS9I | GGNCC | 4 cut(s) | 321, 328, 745, 965 |
| AsuHPI | GGTGA | 2 cut(s) | 674, 819 |
| AsuII | TTCGAA | 1 cut(s) | 170 |
| AvaII | GGWCC | 1 cut(s) | 745 |
| BalI | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| BamHI | GGATCC | 2 cut(s) | 379, 1179 |
| BanI | GGYRCC | 2 cut(s) | 1495, 1631 |
| BanII | GRGCYC | 1 cut(s) | 876 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BccI | CCATC | 5 cut(s) | 345, 386, 659, 854, 1340 |
| BceAI | ACGGC | 2 cut(s) | 921, 1509 |
| BciT130I | CCWGG | 3 cut(s) | 29, 963, 1212 |
| BcoDI | GTCTC | 1 cut(s) | 54 |
| BfaI | CTAG | 7 cut(s) | 608, 656, 836, 1008, 1095, 1272, 1436 |
| BfmI | CTRYAG | 2 cut(s) | 1407, 1650 |
| BfrI | CTTAAG | 1 cut(s) | 614 |
| BfuAI | ACCTGC | 2 cut(s) | 242, 838 |
| BisI | GCNGC | 1 cut(s) | 1449 |
| BlsI | GCNGC | 1 cut(s) | 1450 |
| Bme1390I | CCNGG | 3 cut(s) | 29, 963, 1212 |
| Bme18I | GGWCC | 1 cut(s) | 745 |
| BmgBI | CACGTC | 1 cut(s) | 825 |
| BmgT120I | GGNCC | 4 cut(s) | 321, 328, 745, 965 |
| BmiI | GGNNCC | 6 cut(s) | 381, 873, 1181, 1452, 1497, 1633 |
| BmrFI | CCNGG | 3 cut(s) | 29, 963, 1212 |
| BmrI | ACTGGG | 1 cut(s) | 835 |
| BmsI | GCATC | 6 cut(s) | 922, 1088, 1144, 1323, 1448, 1482 |
| BmuI | ACTGGG | 1 cut(s) | 835 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 249, 281 |
| BpmI | CTGGAG | 1 cut(s) | 1194 |
| Bpu10I | CCTNAGC | 1 cut(s) | 177 |
| Bpu14I | TTCGAA | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 1 cut(s) | 371 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1578 |
| BsaHI | GRCGYC | 1 cut(s) | 908 |
| BsaJI | CCNNGG | 4 cut(s) | 61, 324, 629, 1491 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1435, 1465, 1507, 1537 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 886, 962 |
| Bse1I | ACTGG | 6 cut(s) | 166, 534, 793, 841, 927, 1511 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1578 |
| BseBI | CCWGG | 3 cut(s) | 29, 963, 1212 |
| BseDI | CCNNGG | 4 cut(s) | 61, 324, 629, 1491 |
| BseGI | GGATG | 6 cut(s) | 10, 397, 846, 923, 1427, 1439 |
| BseJI | GATNNNNATC | 1 cut(s) | 1578 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 886, 962 |
| BseMII | CTCAG | 1 cut(s) | 168 |
| BseNI | ACTGG | 6 cut(s) | 166, 534, 793, 841, 927, 1511 |
| BseRI | GAGGAG | 2 cut(s) | 884, 1094 |
| BsgI | GTGCAG | 1 cut(s) | 816 |
| BshFI | GGCC | 7 cut(s) | 27, 165, 322, 329, 628, 792, 966 |
| BshNI | GGYRCC | 2 cut(s) | 1495, 1631 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BslFI | GGGAC | 2 cut(s) | 134, 518 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 886, 962 |
| BsmAI | GTCTC | 1 cut(s) | 54 |
| BsmFI | GGGAC | 2 cut(s) | 134, 518 |
| BsnI | GGCC | 7 cut(s) | 27, 165, 322, 329, 628, 792, 966 |
| Bsp119I | TTCGAA | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 2 cut(s) | 183, 876 |
| Bsp143I | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| BspACI | CCGC | 4 cut(s) | 197, 850, 1448, 1529 |
| BspANI | GGCC | 7 cut(s) | 27, 165, 322, 329, 628, 792, 966 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspLI | GGNNCC | 6 cut(s) | 381, 873, 1181, 1452, 1497, 1633 |
| BspMAI | CTGCAG | 1 cut(s) | 1411 |
| BspMI | ACCTGC | 2 cut(s) | 242, 838 |
| BspPI | GGATC | 7 cut(s) | 362, 374, 387, 944, 1174, 1187, 1568 |
| BspT104I | TTCGAA | 1 cut(s) | 170 |
| BspT107I | GGYRCC | 2 cut(s) | 1495, 1631 |
| BspTI | CTTAAG | 1 cut(s) | 614 |
| BsrBI | CCGCTC | 1 cut(s) | 852 |
| BsrI | ACTGG | 6 cut(s) | 166, 534, 793, 841, 927, 1511 |
| BssECI | CCNNGG | 4 cut(s) | 61, 324, 629, 1491 |
| BssMI | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| BssNI | GRCGYC | 1 cut(s) | 908 |
| BssT1I | CCWWGG | 3 cut(s) | 61, 324, 629 |
| Bst2UI | CCWGG | 3 cut(s) | 29, 963, 1212 |
| Bst4CI | ACNGT | 2 cut(s) | 302, 807 |
| Bst6I | CTCTTC | 2 cut(s) | 586, 1196 |
| BstACI | GRCGYC | 1 cut(s) | 908 |
| BstAFI | CTTAAG | 1 cut(s) | 614 |
| BstBI | TTCGAA | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 3 cut(s) | 72, 980, 1588 |
| BstDEI | CTNAG | 4 cut(s) | 177, 946, 1397, 1627 |
| BstDSI | CCRYGG | 1 cut(s) | 1491 |
| BstF5I | GGATG | 6 cut(s) | 10, 397, 846, 923, 1427, 1439 |
| BstHHI | GCGC | 1 cut(s) | 944 |
| BstKTI | GATC | 9 cut(s) | 357, 382, 550, 886, 952, 1158, 1182, 1419, 1576 |
| BstMAI | GTCTC | 1 cut(s) | 54 |
| BstMBI | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 214, 407, 518, 819, 941, 988, 1445, 1596 |
| BstNI | CCWGG | 3 cut(s) | 29, 963, 1212 |
| BstNSI | RCATGY | 2 cut(s) | 74, 1086 |
| BstSCI | CCNGG | 3 cut(s) | 27, 961, 1210 |
| BstSFI | CTRYAG | 2 cut(s) | 1407, 1650 |
| BstX2I | RGATCY | 3 cut(s) | 379, 949, 1179 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1518, 1539 |
| BstYI | RGATCY | 3 cut(s) | 379, 949, 1179 |
| BsuRI | GGCC | 7 cut(s) | 27, 165, 322, 329, 628, 792, 966 |
| BtgI | CCRYGG | 1 cut(s) | 1491 |
| BtgZI | GCGATG | 1 cut(s) | 223 |
| BtrI | CACGTC | 1 cut(s) | 825 |
| BtsCI | GGATG | 6 cut(s) | 10, 397, 846, 923, 1427, 1439 |
| BtsIMutI | CAGTG | 3 cut(s) | 282, 800, 934 |
| BveI | ACCTGC | 2 cut(s) | 242, 838 |
| Cac8I | GCNNGC | 3 cut(s) | 72, 980, 1588 |
| CfoI | GCGC | 1 cut(s) | 944 |
| Cfr13I | GGNCC | 4 cut(s) | 321, 328, 745, 965 |
| CseI | GACGC | 2 cut(s) | 510, 897 |
| Csp6I | GTAC | 5 cut(s) | 260, 426, 1080, 1215, 1285 |
| CviAII | CATG | 9 cut(s) | 71, 116, 284, 545, 972, 992, 1040, 1083, 1518 |
| CviQI | GTAC | 5 cut(s) | 260, 426, 1080, 1215, 1285 |
| DdeI | CTNAG | 4 cut(s) | 177, 946, 1397, 1627 |
| DpnI | GATC | 9 cut(s) | 356, 381, 549, 885, 951, 1157, 1181, 1418, 1575 |
| DpnII | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| EaeI | YGGCCR | 4 cut(s) | 25, 163, 626, 790 |
| Eam1104I | CTCTTC | 2 cut(s) | 586, 1196 |
| EarI | CTCTTC | 2 cut(s) | 586, 1196 |
| Eco130I | CCWWGG | 3 cut(s) | 61, 324, 629 |
| Eco24I | GRGCYC | 1 cut(s) | 876 |
| Eco47I | GGWCC | 1 cut(s) | 745 |
| Eco57I | CTGAAG | 2 cut(s) | 1052, 1177 |
| EcoO109I | RGGNCCY | 1 cut(s) | 328 |
| EcoRI | GAATTC | 1 cut(s) | 19 |
| EcoRII | CCWGG | 3 cut(s) | 27, 961, 1210 |
| EcoT14I | CCWWGG | 3 cut(s) | 61, 324, 629 |
| EcoT22I | ATGCAT | 1 cut(s) | 1137 |
| EcoT38I | GRGCYC | 1 cut(s) | 876 |
| ErhI | CCWWGG | 3 cut(s) | 61, 324, 629 |
| FaeI | CATG | 9 cut(s) | 74, 119, 287, 548, 975, 995, 1043, 1086, 1521 |
| FaqI | GGGAC | 2 cut(s) | 134, 518 |
| FatI | CATG | 9 cut(s) | 70, 115, 283, 544, 971, 991, 1039, 1082, 1517 |
| FauI | CCCGC | 1 cut(s) | 1536 |
| FauNDI | CATATG | 1 cut(s) | 1131 |
| FblI | GTMKAC | 1 cut(s) | 1296 |
| Fnu4HI | GCNGC | 1 cut(s) | 1449 |
| FokI | GGATG | 6 cut(s) | 17, 404, 833, 910, 1414, 1426 |
| FriOI | GRGCYC | 1 cut(s) | 876 |
| Fsp4HI | GCNGC | 1 cut(s) | 1449 |
| FspBI | CTAG | 7 cut(s) | 608, 656, 836, 1008, 1095, 1272, 1436 |
| GlaI | GCGC | 1 cut(s) | 943 |
| GluI | GCNGC | 1 cut(s) | 1449 |
| GsuI | CTGGAG | 1 cut(s) | 1194 |
| HaeIII | GGCC | 7 cut(s) | 27, 165, 322, 329, 628, 792, 966 |
| HgaI | GACGC | 2 cut(s) | 510, 897 |
| HhaI | GCGC | 1 cut(s) | 944 |
| Hin1I | GRCGYC | 1 cut(s) | 908 |
| Hin1II | CATG | 9 cut(s) | 74, 119, 287, 548, 975, 995, 1043, 1086, 1521 |
| Hin6I | GCGC | 1 cut(s) | 942 |
| HinP1I | GCGC | 1 cut(s) | 942 |
| HindIII | AAGCTT | 2 cut(s) | 811, 1620 |
| HinfI | GANTC | 7 cut(s) | 103, 112, 147, 280, 1124, 1403, 1522 |
| HphI | GGTGA | 2 cut(s) | 674, 819 |
| Hpy166II | GTNNAC | 3 cut(s) | 121, 525, 1297 |
| Hpy188I | TCNGA | 6 cut(s) | 102, 901, 1071, 1123, 1146, 1196 |
| Hpy188III | TCNNGA | 5 cut(s) | 358, 740, 1095, 1368, 1571 |
| Hpy8I | GTNNAC | 3 cut(s) | 121, 525, 1297 |
| Hpy99I | CGWCG | 1 cut(s) | 1222 |
| HpyAV | CCTTC | 4 cut(s) | 635, 978, 1313, 1645 |
| HpyCH4III | ACNGT | 2 cut(s) | 302, 807 |
| HpyCH4IV | ACGT | 4 cut(s) | 507, 711, 824, 1217 |
| HpyCH4V | TGCA | 8 cut(s) | 544, 571, 833, 978, 1039, 1135, 1314, 1409 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 214, 407, 518, 819, 941, 988, 1445, 1596 |
| HpyF3I | CTNAG | 4 cut(s) | 177, 946, 1397, 1627 |
| HpySE526I | ACGT | 4 cut(s) | 507, 711, 824, 1217 |
| Hsp92I | GRCGYC | 1 cut(s) | 908 |
| Hsp92II | CATG | 9 cut(s) | 74, 119, 287, 548, 975, 995, 1043, 1086, 1521 |
| HspAI | GCGC | 1 cut(s) | 942 |
| Kzo9I | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| LmnI | GCTCC | 3 cut(s) | 871, 1352, 1456 |
| LweI | GCATC | 6 cut(s) | 922, 1088, 1144, 1323, 1448, 1482 |
| MaeI | CTAG | 7 cut(s) | 608, 656, 836, 1008, 1095, 1272, 1436 |
| MaeII | ACGT | 4 cut(s) | 507, 711, 824, 1217 |
| MaeIII | GTNAC | 4 cut(s) | 689, 825, 1018, 1513 |
| MalI | GATC | 9 cut(s) | 356, 381, 549, 885, 951, 1157, 1181, 1418, 1575 |
| MbiI | CCGCTC | 1 cut(s) | 852 |
| MboI | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| MboII | GAAGA | 3 cut(s) | 573, 1058, 1183 |
| MfeI | CAATTG | 3 cut(s) | 192, 694, 855 |
| MflI | RGATCY | 3 cut(s) | 379, 949, 1179 |
| MhlI | GDGCHC | 2 cut(s) | 183, 876 |
| MlsI | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| MluNI | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| MlyI | GAGTC | 2 cut(s) | 156, 1516 |
| MmeI | TCCRAC | 3 cut(s) | 80, 618, 1207 |
| Mox20I | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| Mph1103I | ATGCAT | 1 cut(s) | 1137 |
| MroXI | GAANNNNTTC | 2 cut(s) | 645, 1541 |
| MscI | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| MseI | TTAA | 2 cut(s) | 615, 1374 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1087 |
| Msp20I | TGGCCA | 4 cut(s) | 27, 165, 628, 792 |
| MspA1I | CMGCKG | 1 cut(s) | 1448 |
| MspCI | CTTAAG | 1 cut(s) | 614 |
| MspR9I | CCNGG | 3 cut(s) | 29, 963, 1212 |
| MunI | CAATTG | 3 cut(s) | 192, 694, 855 |
| MvaI | CCWGG | 3 cut(s) | 29, 963, 1212 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 214, 407, 518, 819, 941, 988, 1445, 1596 |
| NdeI | CATATG | 1 cut(s) | 1131 |
| NdeII | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| NlaIII | CATG | 9 cut(s) | 74, 119, 287, 548, 975, 995, 1043, 1086, 1521 |
| NlaIV | GGNNCC | 6 cut(s) | 381, 873, 1181, 1452, 1497, 1633 |
| NmuCI | GTSAC | 4 cut(s) | 689, 825, 1018, 1513 |
| NsiI | ATGCAT | 1 cut(s) | 1137 |
| NspI | RCATGY | 2 cut(s) | 74, 1086 |
| NspV | TTCGAA | 1 cut(s) | 170 |
| PaeI | GCATGC | 1 cut(s) | 74 |
| PaqCI | CACCTGC | 1 cut(s) | 838 |
| PdmI | GAANNNNTTC | 2 cut(s) | 645, 1541 |
| PfeI | GAWTC | 5 cut(s) | 103, 112, 280, 1124, 1403 |
| PkrI | GCNGC | 1 cut(s) | 1450 |
| PleI | GAGTC | 2 cut(s) | 155, 1516 |
| PpsI | GAGTC | 2 cut(s) | 155, 1516 |
| PsiI | TTATAA | 1 cut(s) | 588 |
| Psp6I | CCWGG | 3 cut(s) | 27, 961, 1210 |
| PspGI | CCWGG | 3 cut(s) | 27, 961, 1210 |
| PspN4I | GGNNCC | 6 cut(s) | 381, 873, 1181, 1452, 1497, 1633 |
| PspPI | GGNCC | 4 cut(s) | 321, 328, 745, 965 |
| PstI | CTGCAG | 1 cut(s) | 1411 |
| PsuI | RGATCY | 3 cut(s) | 379, 949, 1179 |
| RsaI | GTAC | 5 cut(s) | 261, 427, 1081, 1216, 1286 |
| RsaNI | GTAC | 5 cut(s) | 260, 426, 1080, 1215, 1285 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1087 |
| SaqAI | TTAA | 2 cut(s) | 615, 1374 |
| SatI | GCNGC | 1 cut(s) | 1449 |
| Sau3AI | GATC | 9 cut(s) | 354, 379, 547, 883, 949, 1155, 1179, 1416, 1573 |
| Sau96I | GGNCC | 4 cut(s) | 321, 328, 745, 965 |
| SchI | GAGTC | 2 cut(s) | 156, 1516 |
| ScrFI | CCNGG | 3 cut(s) | 29, 963, 1212 |
| SduI | GDGCHC | 2 cut(s) | 183, 876 |
| SfaNI | GCATC | 6 cut(s) | 922, 1088, 1144, 1323, 1448, 1482 |
| SfcI | CTRYAG | 2 cut(s) | 1407, 1650 |
| SfuI | TTCGAA | 1 cut(s) | 170 |
| SinI | GGWCC | 1 cut(s) | 745 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1087 |
| SmlI | CTYRAG | 2 cut(s) | 386, 614 |
| SmoI | CTYRAG | 2 cut(s) | 386, 614 |
| SphI | GCATGC | 1 cut(s) | 74 |
| SsiI | CCGC | 4 cut(s) | 197, 850, 1448, 1529 |
| SspI | AATATT | 1 cut(s) | 463 |
| SspMI | CTAG | 7 cut(s) | 608, 656, 836, 1008, 1095, 1272, 1436 |
| StyD4I | CCNGG | 3 cut(s) | 27, 961, 1210 |
| StyI | CCWWGG | 3 cut(s) | 61, 324, 629 |
| TaaI | ACNGT | 2 cut(s) | 302, 807 |
| TaiI | ACGT | 4 cut(s) | 510, 714, 827, 1220 |
| TaqI | TCGA | 3 cut(s) | 170, 1260, 1461 |
| TatI | WGTACW | 1 cut(s) | 259 |
| TauI | GCSGC | 1 cut(s) | 1451 |
| TfiI | GAWTC | 5 cut(s) | 103, 112, 280, 1124, 1403 |
| Tru1I | TTAA | 2 cut(s) | 615, 1374 |
| Tru9I | TTAA | 2 cut(s) | 615, 1374 |
| TscAI | CASTG | 3 cut(s) | 282, 800, 934 |
| TseFI | GTSAC | 4 cut(s) | 689, 825, 1018, 1513 |
| Tsp45I | GTSAC | 4 cut(s) | 689, 825, 1018, 1513 |
| TspDTI | ATGAA | 8 cut(s) | 104, 261, 272, 330, 769, 960, 1375, 1632 |
| TspRI | CASTG | 3 cut(s) | 282, 800, 934 |
| Vha464I | CTTAAG | 1 cut(s) | 614 |
| VpaK11BI | GGWCC | 1 cut(s) | 745 |
| XapI | RAATTY | 4 cut(s) | 19, 799, 1047, 1552 |
| XbaI | TCTAGA | 1 cut(s) | 1094 |
| XceI | RCATGY | 2 cut(s) | 74, 1086 |
| XmiI | GTMKAC | 1 cut(s) | 1296 |
| XmnI | GAANNNNTTC | 2 cut(s) | 645, 1541 |
| XspI | CTAG | 7 cut(s) | 608, 656, 836, 1008, 1095, 1272, 1436 |
| Zsp2I | ATGCAT | 1 cut(s) | 1137 |