RchiOBHm_Chr1g0364981

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000846
Physical Location & Seq
Reverse (-)
56022805 .. 56027627
4823 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1377 bp
ATGCTACTGGTAGCTCGACAATTCAGCCATCGATGGTGGCGCCGCCGCCGTCCACATATCCGCCTCTCCCACACTGCACTCACCAACCTCAACTTCCACTCCGAATCCGACGACTTCTTGTCGTGGCTGGAGCGCAAGTCCGGCACCGAAATCTCTTCCGCGCTTTCGATAGGGAAATCCACTCTCGGAACGGCTCTCTTTGCTTCCAAGACCATAAGAGCCGGAGACTGCATATTGAAAGTTCCGTACAGCGTGCAACTAGCTCCGGATAATCTTGCTCCGGAATTGAGAGCTCTGTTAGGTGATCGAGTCGGTGATGTTGCGAAGGTCGCCATTGTCATTTTGCTTGAGCAGAAAATGGGCCAGGACTCTGAATGGGCTCCTTACATCAGCCGGCTTCCTCGCCCCGAGGAGATGCATAGCACAATATTTTGGAGCGAAGATGAGTTGGAGATGATTTGTCGAAGCTCTCTGTATCAGGAGACAATTAATCAAAGATCCCTTGTTGAAAAGGAATTTTTGGCAGTTAGGAGAGCTCTTGAGCACTTTCCTGAGATGTTCCAAAGTATCAGCTGTAAGGATTTCATGCATGCATATGCTTTAGTTACTTCTCGAGCATGGGGAAGCAGAAAGGGTTATTCCCTGATTCCATTTGCAGATTTTTTGAACCATGATGGGACTTCAGAATCAGTTGTGCTGAGTGATGATGACAGACATTTCTCAGAGGTGATTGCTGATCGTAATTATGCTCAAGGTGAACAGGTGCTGATAAGATATGGCAAATTTTCAAATGCTACCCTGCTGTTGGACTTTGGGTTTACACTTCCATACAACATTCACGACCAGGTCCAGATCCAGGTAAACATACCTCATCATGATATTCTTCGTGATTTGAAGTTGGAACTTTTGAAGAGACATCATAGACCAATCAACAATGACATCAATGGTTTCAACTCGTCAGTGGATTGTTTCACAATCAAGGAAGTGAAATCTGGTAGTGGAAATGGGAAAGGAATTCCACAGTCACTTCGTGCATTTGCTCGTGTCCTATGTTGTACCTCATGTGAAGAACTTAGTGACCTGGCCAATGAAGCAGTGGAACATGATGGTCGATTGGCTCGGCGTCCTTTAACAAATAGAAGCAGAGAGATTGAAGCACATCAGATGCTGATGGAAAAATTAACCCAATTAGCTGAAGATTGTGATGCATCTTTTAAGTCTCTGGGACCCGTAAGTTCTCCTGTTACGTTTGAAAGGCCCTCTCTCCGGAAGCAAATGGCTCGCGATCTCCTTAATGGAGAGCTTCGCATCCTCAAATCCGCGTGCGCATGGCTTAAAGACTACTGCACAACCTTGACTGCAACAGACTACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 map00310
Pfam Domains
Protein Families
Rubis-subs-bind SET

Protein Analysis

458

Amino Acids

52.14

Weight (kDa)

6.63

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rubis-subs-bind PF09273 293 - 438 8.8e-07 Rubisco LSMT substrate-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1327
AccB1I GGYRCC 2 cut(s) 39, 143
AccII CGCG 3 cut(s) 161, 1284, 1322
AccIII TCCGGA 3 cut(s) 265, 280, 1266
AciI CCGC 5 cut(s) 43, 46, 61, 159, 1320
AclWI GGATC 2 cut(s) 492, 847
AcoI YGGCCR 1 cut(s) 1083
AcsI RAATTY 3 cut(s) 515, 782, 1014
AcuI CTGAAG 2 cut(s) 666, 1215
AcyI GRCGYC 2 cut(s) 40, 1123
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 2 cut(s) 248, 1057
AfiI CCNNNNNNNGG 3 cut(s) 805, 856, 1266
AgsI TTSAA 9 cut(s) 238, 509, 667, 789, 895, 910, 952, 1154, 1253
AhdI GACNNNNNGTC 1 cut(s) 118
AjnI CCWGG 4 cut(s) 363, 843, 855, 1080
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AluBI AGCT 8 cut(s) 14, 263, 293, 468, 536, 573, 1193, 1303
AluI AGCT 8 cut(s) 14, 263, 293, 468, 536, 573, 1193, 1303
Alw21I GWGCWC 3 cut(s) 295, 538, 546
Alw26I GTCTC 4 cut(s) 219, 476, 907, 1224
AlwI GGATC 2 cut(s) 492, 847
AlwNI CAGNNNCTG 2 cut(s) 766, 1168
Ama87I CYCGRG 2 cut(s) 407, 612
Aor13HI TCCGGA 3 cut(s) 265, 280, 1266
AoxI GGCC 3 cut(s) 361, 1083, 1256
ApoI RAATTY 3 cut(s) 515, 782, 1014
AseI ATTAAT 1 cut(s) 489
AspLEI GCGC 4 cut(s) 42, 135, 163, 1328
AspS9I GGNCC 4 cut(s) 361, 847, 1226, 1257
AsuHPI GGTGA 5 cut(s) 73, 314, 326, 739, 767
AvaI CYCGRG 2 cut(s) 407, 612
AvaII GGWCC 2 cut(s) 847, 1226
BalI TGGCCA 1 cut(s) 1085
BanI GGYRCC 2 cut(s) 39, 143
BanII GRGCYC 3 cut(s) 295, 382, 538
BauI CACGAG 1 cut(s) 1041
Bbv12I GWGCWC 3 cut(s) 295, 538, 546
BccI CCATC 5 cut(s) 27, 36, 668, 1100, 1165
BceAI ACGGC 2 cut(s) 33, 207
BcgI CGANNNNNNTGC 2 cut(s) 1262, 1296
BciT130I CCWGG 4 cut(s) 365, 845, 857, 1082
BcoDI GTCTC 4 cut(s) 219, 476, 907, 1224
BfaI CTAG 1 cut(s) 260
BfoI RGCGCY 1 cut(s) 43
BisI GCNGC 2 cut(s) 43, 46
BlsI GCNGC 2 cut(s) 44, 47
Bme1390I CCNGG 4 cut(s) 365, 845, 857, 1082
Bme18I GGWCC 2 cut(s) 847, 1226
BmeRI GACNNNNNGTC 1 cut(s) 118
BmeT110I CYCGRG 2 cut(s) 407, 612
BmgT120I GGNCC 4 cut(s) 361, 847, 1226, 1257
BmiI GGNNCC 5 cut(s) 41, 145, 381, 1227, 1228
BmrFI CCNGG 4 cut(s) 365, 845, 857, 1082
BmsI GCATC 5 cut(s) 405, 1155, 1195, 1217, 1317
BpmI CTGGAG 1 cut(s) 149
BpuEI CTTGAG 3 cut(s) 368, 560, 735
Bsa29I ATCGAT 1 cut(s) 31
BsaHI GRCGYC 2 cut(s) 40, 1123
BsaJI CCNNGG 1 cut(s) 408
BsaWI WCCGGW 3 cut(s) 265, 280, 1266
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 122, 152
Bsc4I CCNNNNNNNGG 3 cut(s) 805, 856, 1266
Bse118I RCCGGY 1 cut(s) 393
Bse1I ACTGG 1 cut(s) 12
BseAI TCCGGA 3 cut(s) 265, 280, 1266
BseBI CCWGG 4 cut(s) 365, 845, 857, 1082
BseCI ATCGAT 1 cut(s) 31
BseDI CCNNGG 1 cut(s) 408
BseGI GGATG 1 cut(s) 1308
BseLI CCNNNNNNNGG 3 cut(s) 805, 856, 1266
BseMII CTCAG 3 cut(s) 543, 689, 735
BseNI ACTGG 1 cut(s) 12
BseRI GAGGAG 1 cut(s) 425
BsgI GTGCAG 2 cut(s) 60, 1330
Bsh1236I CGCG 3 cut(s) 161, 1284, 1322
BshFI GGCC 3 cut(s) 363, 1085, 1258
BshNI GGYRCC 2 cut(s) 39, 143
BshVI ATCGAT 1 cut(s) 31
BsiHKAI GWGCWC 3 cut(s) 295, 538, 546
BsiHKCI CYCGRG 2 cut(s) 407, 612
BsiSI CCGG 6 cut(s) 141, 222, 266, 281, 394, 1267
BslFI GGGAC 2 cut(s) 691, 1239
BslI CCNNNNNNNGG 3 cut(s) 805, 856, 1266
BsmAI GTCTC 4 cut(s) 219, 476, 907, 1224
BsmFI GGGAC 2 cut(s) 691, 1239
BsnI GGCC 3 cut(s) 363, 1085, 1258
BsoBI CYCGRG 2 cut(s) 407, 612
Bsp1286I GDGCHC 4 cut(s) 295, 382, 538, 546
Bsp13I TCCGGA 3 cut(s) 265, 280, 1266
Bsp143I GATC 5 cut(s) 304, 497, 736, 852, 1285
Bsp68I TCGCGA 1 cut(s) 1284
BspACI CCGC 5 cut(s) 43, 46, 61, 159, 1320
BspANI GGCC 3 cut(s) 363, 1085, 1258
BspCNI CTCAG 3 cut(s) 544, 690, 734
BspDI ATCGAT 1 cut(s) 31
BspEI TCCGGA 3 cut(s) 265, 280, 1266
BspFNI CGCG 3 cut(s) 161, 1284, 1322
BspHI TCATGA 1 cut(s) 874
BspLI GGNNCC 5 cut(s) 41, 145, 381, 1227, 1228
BspPI GGATC 2 cut(s) 492, 847
BspT107I GGYRCC 2 cut(s) 39, 143
BsrFI RCCGGY 1 cut(s) 393
BsrI ACTGG 1 cut(s) 12
BssAI RCCGGY 1 cut(s) 393
BssECI CCNNGG 1 cut(s) 408
BssMI GATC 5 cut(s) 304, 497, 736, 852, 1285
BssNI GRCGYC 2 cut(s) 40, 1123
BssSI CACGAG 1 cut(s) 1041
Bst2BI CACGAG 1 cut(s) 1041
Bst2UI CCWGG 4 cut(s) 365, 845, 857, 1082
Bst4CI ACNGT 1 cut(s) 1023
Bst6I CTCTTC 2 cut(s) 160, 905
BstACI GRCGYC 2 cut(s) 40, 1123
BstC8I GCNNGC 5 cut(s) 254, 395, 591, 1282, 1324
BstDEI CTNAG 4 cut(s) 552, 698, 721, 1073
BstF5I GGATG 1 cut(s) 1308
BstFNI CGCG 3 cut(s) 161, 1284, 1322
BstH2I RGCGCY 1 cut(s) 43
BstHHI GCGC 4 cut(s) 42, 135, 163, 1328
BstKTI GATC 5 cut(s) 307, 500, 739, 855, 1288
BstMAI GTCTC 4 cut(s) 219, 476, 907, 1224
BstMBI GATC 5 cut(s) 304, 497, 736, 852, 1285
BstMWI GCNNNNNNNGC 4 cut(s) 141, 200, 329, 1091
BstNI CCWGG 4 cut(s) 365, 845, 857, 1082
BstNSI RCATGY 1 cut(s) 593
BstSCI CCNGG 4 cut(s) 363, 843, 855, 1080
BstUI CGCG 3 cut(s) 161, 1284, 1322
BstX2I RGATCY 2 cut(s) 497, 852
BstYI RGATCY 2 cut(s) 497, 852
Bsu15I ATCGAT 1 cut(s) 31
BsuRI GGCC 3 cut(s) 363, 1085, 1258
BsuTUI ATCGAT 1 cut(s) 31
BtsCI GGATG 1 cut(s) 1308
BtsI GCAGTG 2 cut(s) 72, 1101
BtsIMutI CAGTG 3 cut(s) 72, 966, 1101
BtuMI TCGCGA 1 cut(s) 1284
Cac8I GCNNGC 5 cut(s) 254, 395, 591, 1282, 1324
CaiI CAGNNNCTG 2 cut(s) 766, 1168
CciI TCATGA 1 cut(s) 874
CfoI GCGC 4 cut(s) 42, 135, 163, 1328
Cfr10I RCCGGY 1 cut(s) 393
Cfr13I GGNCC 4 cut(s) 361, 847, 1226, 1257
ClaI ATCGAT 1 cut(s) 31
CseI GACGC 1 cut(s) 1112
CsiI ACCWGGT 1 cut(s) 843
Csp6I GTAC 2 cut(s) 247, 1056
CviAII CATG 8 cut(s) 586, 590, 618, 671, 875, 1062, 1103, 1329
CviQI GTAC 2 cut(s) 247, 1056
DdeI CTNAG 4 cut(s) 552, 698, 721, 1073
DinI GGCGCC 1 cut(s) 41
DpnI GATC 5 cut(s) 306, 499, 738, 854, 1287
DpnII GATC 5 cut(s) 304, 497, 736, 852, 1285
DraIII CACNNNGTG 1 cut(s) 1031
DriI GACNNNNNGTC 1 cut(s) 118
EaeI YGGCCR 1 cut(s) 1083
Eam1104I CTCTTC 2 cut(s) 160, 905
Eam1105I GACNNNNNGTC 1 cut(s) 118
EarI CTCTTC 2 cut(s) 160, 905
EciI GGCGGA 1 cut(s) 50
Ecl136II GAGCTC 2 cut(s) 293, 536
Eco24I GRGCYC 3 cut(s) 295, 382, 538
Eco47I GGWCC 2 cut(s) 847, 1226
Eco53kI GAGCTC 2 cut(s) 293, 536
Eco57I CTGAAG 2 cut(s) 666, 1215
Eco88I CYCGRG 2 cut(s) 407, 612
EcoICRI GAGCTC 2 cut(s) 293, 536
EcoO109I RGGNCCY 2 cut(s) 1226, 1257
EcoRI GAATTC 1 cut(s) 1014
EcoRII CCWGG 4 cut(s) 363, 843, 855, 1080
EcoT22I ATGCAT 4 cut(s) 420, 591, 595, 1210
EcoT38I GRGCYC 3 cut(s) 295, 382, 538
EgeI GGCGCC 1 cut(s) 41
EheI GGCGCC 1 cut(s) 41
FaeI CATG 8 cut(s) 589, 593, 621, 674, 878, 1065, 1106, 1332
FaqI GGGAC 2 cut(s) 691, 1239
FatI CATG 8 cut(s) 585, 589, 617, 670, 874, 1061, 1102, 1328
FauNDI CATATG 1 cut(s) 595
Fnu4HI GCNGC 2 cut(s) 43, 46
FokI GGATG 1 cut(s) 1295
FriOI GRGCYC 3 cut(s) 295, 382, 538
Fsp4HI GCNGC 2 cut(s) 43, 46
FspAI RTGCGCAY 1 cut(s) 1327
FspBI CTAG 1 cut(s) 260
FspI TGCGCA 1 cut(s) 1327
GlaI GCGC 4 cut(s) 41, 134, 162, 1327
GluI GCNGC 2 cut(s) 43, 46
GsuI CTGGAG 1 cut(s) 149
HaeII RGCGCY 1 cut(s) 43
HaeIII GGCC 3 cut(s) 363, 1085, 1258
HapII CCGG 6 cut(s) 141, 222, 266, 281, 394, 1267
HgaI GACGC 1 cut(s) 1112
HhaI GCGC 4 cut(s) 42, 135, 163, 1328
Hin1I GRCGYC 2 cut(s) 40, 1123
Hin1II CATG 8 cut(s) 589, 593, 621, 674, 878, 1065, 1106, 1332
Hin6I GCGC 4 cut(s) 40, 133, 161, 1326
HinP1I GCGC 4 cut(s) 40, 133, 161, 1326
HinfI GANTC 5 cut(s) 104, 309, 368, 646, 686
HpaII CCGG 6 cut(s) 141, 222, 266, 281, 394, 1267
HphI GGTGA 5 cut(s) 73, 314, 326, 739, 767
Hpy166II GTNNAC 4 cut(s) 53, 758, 819, 862
Hpy188I TCNGA 7 cut(s) 103, 109, 188, 373, 685, 724, 1164
Hpy8I GTNNAC 4 cut(s) 53, 758, 819, 862
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 1 cut(s) 319
HpyCH4III ACNGT 1 cut(s) 1023
HpyCH4IV ACGT 1 cut(s) 1247
HpyF10VI GCNNNNNNNGC 4 cut(s) 141, 200, 329, 1091
HpyF3I CTNAG 4 cut(s) 552, 698, 721, 1073
HpySE526I ACGT 1 cut(s) 1247
Hsp92I GRCGYC 2 cut(s) 40, 1123
Hsp92II CATG 8 cut(s) 589, 593, 621, 674, 878, 1065, 1106, 1332
HspAI GCGC 4 cut(s) 40, 133, 161, 1326
KasI GGCGCC 1 cut(s) 39
KflI GGGWCCC 1 cut(s) 1226
Kpn2I TCCGGA 3 cut(s) 265, 280, 1266
KroI GCCGGC 1 cut(s) 393
KroNI GCCGGC 1 cut(s) 395
Kzo9I GATC 5 cut(s) 304, 497, 736, 852, 1285
LmnI GCTCC 5 cut(s) 130, 268, 283, 385, 435
LweI GCATC 5 cut(s) 405, 1155, 1195, 1217, 1317
MabI ACCWGGT 1 cut(s) 843
MaeI CTAG 1 cut(s) 260
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 4 cut(s) 604, 1023, 1076, 1243
MalI GATC 5 cut(s) 306, 499, 738, 854, 1287
MboI GATC 5 cut(s) 304, 497, 736, 852, 1285
MboII GAAGA 6 cut(s) 147, 452, 875, 922, 1079, 1208
MflI RGATCY 2 cut(s) 497, 852
MhlI GDGCHC 4 cut(s) 295, 382, 538, 546
MlsI TGGCCA 1 cut(s) 1085
MluCI AATT 9 cut(s) 20, 284, 486, 515, 742, 782, 1014, 1178, 1187
MluNI TGGCCA 1 cut(s) 1085
Mly113I GGCGCC 1 cut(s) 40
MlyI GAGTC 2 cut(s) 318, 362
MmeI TCCRAC 4 cut(s) 132, 429, 786, 879
MnlI CCTC 9 cut(s) 74, 98, 403, 411, 718, 879, 1069, 1270, 1322
Mox20I TGGCCA 1 cut(s) 1085
Mph1103I ATGCAT 4 cut(s) 420, 591, 595, 1210
MroI TCCGGA 3 cut(s) 265, 280, 1266
MroNI GCCGGC 1 cut(s) 393
MscI TGGCCA 1 cut(s) 1085
MseI TTAA 7 cut(s) 489, 1130, 1181, 1215, 1293, 1335, 1375
MslI CAYNNNNRTG 1 cut(s) 594
Msp20I TGGCCA 1 cut(s) 1085
MspA1I CMGCKG 1 cut(s) 573
MspI CCGG 6 cut(s) 141, 222, 266, 281, 394, 1267
MspR9I CCNGG 4 cut(s) 365, 845, 857, 1082
MvaI CCWGG 4 cut(s) 365, 845, 857, 1082
MvnI CGCG 3 cut(s) 161, 1284, 1322
MwoI GCNNNNNNNGC 4 cut(s) 141, 200, 329, 1091
NaeI GCCGGC 1 cut(s) 395
NarI GGCGCC 1 cut(s) 40
NdeI CATATG 1 cut(s) 595
NdeII GATC 5 cut(s) 304, 497, 736, 852, 1285
NgoMIV GCCGGC 1 cut(s) 393
NlaIII CATG 8 cut(s) 589, 593, 621, 674, 878, 1065, 1106, 1332
NlaIV GGNNCC 5 cut(s) 41, 145, 381, 1227, 1228
NmeAIII GCCGAG 1 cut(s) 1099
NmuCI GTSAC 2 cut(s) 1023, 1076
NruI TCGCGA 1 cut(s) 1284
NsbI TGCGCA 1 cut(s) 1327
NsiI ATGCAT 4 cut(s) 420, 591, 595, 1210
NspI RCATGY 1 cut(s) 593
PaeI GCATGC 1 cut(s) 593
PaeR7I CTCGAG 1 cut(s) 612
PagI TCATGA 1 cut(s) 874
PdiI GCCGGC 1 cut(s) 395
PfeI GAWTC 3 cut(s) 104, 646, 686
PflFI GACNNNGTC 1 cut(s) 845
PkrI GCNGC 2 cut(s) 44, 47
PleI GAGTC 2 cut(s) 317, 362
PluTI GGCGCC 1 cut(s) 43
PpsI GAGTC 2 cut(s) 317, 362
PpuMI RGGWCCY 1 cut(s) 1226
PshBI ATTAAT 1 cut(s) 489
Psp124BI GAGCTC 2 cut(s) 295, 538
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 4 cut(s) 363, 843, 855, 1080
PspGI CCWGG 4 cut(s) 363, 843, 855, 1080
PspN4I GGNNCC 5 cut(s) 41, 145, 381, 1227, 1228
PspPI GGNCC 4 cut(s) 361, 847, 1226, 1257
PspPPI RGGWCCY 1 cut(s) 1226
PstNI CAGNNNCTG 2 cut(s) 766, 1168
PsuI RGATCY 2 cut(s) 497, 852
PsyI GACNNNGTC 1 cut(s) 845
PvuII CAGCTG 1 cut(s) 573
RruI TCGCGA 1 cut(s) 1284
RsaI GTAC 2 cut(s) 248, 1057
RsaNI GTAC 2 cut(s) 247, 1056
RseI CAYNNNNRTG 1 cut(s) 594
SacI GAGCTC 2 cut(s) 295, 538
SaqAI TTAA 7 cut(s) 489, 1130, 1181, 1215, 1293, 1335, 1375
SatI GCNGC 2 cut(s) 43, 46
Sau3AI GATC 5 cut(s) 304, 497, 736, 852, 1285
Sau96I GGNCC 4 cut(s) 361, 847, 1226, 1257
SchI GAGTC 2 cut(s) 318, 362
ScrFI CCNGG 4 cut(s) 365, 845, 857, 1082
SduI GDGCHC 4 cut(s) 295, 382, 538, 546
SexAI ACCWGGT 1 cut(s) 843
SfaNI GCATC 5 cut(s) 405, 1155, 1195, 1217, 1317
SfoI GGCGCC 1 cut(s) 41
Sfr274I CTCGAG 1 cut(s) 612
SinI GGWCC 2 cut(s) 847, 1226
SlaI CTCGAG 1 cut(s) 612
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 4 cut(s) 347, 539, 612, 750
SmoI CTYRAG 4 cut(s) 347, 539, 612, 750
SphI GCATGC 1 cut(s) 593
Sse9I AATT 9 cut(s) 20, 284, 486, 515, 742, 782, 1014, 1178, 1187
SsiI CCGC 5 cut(s) 43, 46, 61, 159, 1320
SspDI GGCGCC 1 cut(s) 39
SspI AATATT 1 cut(s) 429
SspMI CTAG 1 cut(s) 260
SstI GAGCTC 2 cut(s) 295, 538
StyD4I CCNGG 4 cut(s) 363, 843, 855, 1080
TaaI ACNGT 1 cut(s) 1023
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 7 cut(s) 16, 31, 167, 307, 463, 613, 1111
TasI AATT 9 cut(s) 20, 284, 486, 515, 742, 782, 1014, 1178, 1187
TauI GCSGC 2 cut(s) 45, 48
TfiI GAWTC 3 cut(s) 104, 646, 686
Tru1I TTAA 7 cut(s) 489, 1130, 1181, 1215, 1293, 1335, 1375
Tru9I TTAA 7 cut(s) 489, 1130, 1181, 1215, 1293, 1335, 1375
TscAI CASTG 3 cut(s) 79, 966, 1101
TseFI GTSAC 2 cut(s) 1023, 1076
Tsp45I GTSAC 2 cut(s) 1023, 1076
TspDTI ATGAA 2 cut(s) 574, 1104
TspGWI ACGGA 1 cut(s) 234
TspRI CASTG 3 cut(s) 79, 966, 1101
Tth111I GACNNNGTC 1 cut(s) 845
VpaK11BI GGWCC 2 cut(s) 847, 1226
VspI ATTAAT 1 cut(s) 489
XapI RAATTY 3 cut(s) 515, 782, 1014
XceI RCATGY 1 cut(s) 593
XcmI CCANNNNNNNNNTGG 1 cut(s) 1093
XhoI CTCGAG 1 cut(s) 612
XspI CTAG 1 cut(s) 260
Zsp2I ATGCAT 4 cut(s) 420, 591, 595, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.