Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1213900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0345651 RchiOBHm_Chr2g0110921 RchiOBHm_Chr4g0407041 RchiOBHm_Chr7g0234401 |
| rosa_laevigata | RLG00000034027 |
| rosa_multiflora | Rmu_sc0001844.1_g000018 Rmu_sc0005996.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00118530 Rroxscaffold_2G00118840 Rroxscaffold_3G00254040 Rroxscaffold_4G00311990 Rroxscaffold_4G00315600 Rroxscaffold_4G00325350 Rroxscaffold_5G00352340 |
| rosa_rugosa | Rorug02G0250600 Rorug05G0413900 |
| rosa_samantha | Rh1AG217500 Rh1BG388800 Rh1CG202000 Rh1CG402100 Rh1DG419900 Rh1DG448000 Rh2AG059100 Rh2AG222200 Rh2BG233500 Rh2BG264300 Rh2DG230000 Rh2DG230100 Rh2DG436400 Rh2DG439700 Rh4BG153300 Rh5AG166500 Rh5DG372000 Rh6BG073700 Rh6BG201200 Rh7AG381500 Rh7BG117300 Rh7BG475600 Rh7CG401000 Rh7CG461100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 125 |
| AciI | CCGC | 1 cut(s) | 324 |
| AcsI | RAATTY | 3 cut(s) | 54, 311, 477 |
| AcuI | CTGAAG | 1 cut(s) | 449 |
| AfaI | GTAC | 2 cut(s) | 211, 426 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 275 |
| AgsI | TTSAA | 3 cut(s) | 21, 94, 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 258, 290 |
| AluBI | AGCT | 1 cut(s) | 437 |
| AluI | AGCT | 1 cut(s) | 437 |
| ApoI | RAATTY | 3 cut(s) | 54, 311, 477 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 358, 390 |
| AspS9I | GGNCC | 1 cut(s) | 30 |
| AvaII | GGWCC | 1 cut(s) | 30 |
| BbsI | GAAGAC | 1 cut(s) | 393 |
| BccI | CCATC | 2 cut(s) | 187, 212 |
| Bme18I | GGWCC | 1 cut(s) | 30 |
| BmgT120I | GGNCC | 1 cut(s) | 30 |
| BmiI | GGNNCC | 1 cut(s) | 32 |
| BpiI | GAAGAC | 1 cut(s) | 393 |
| BsaJI | CCNNGG | 1 cut(s) | 143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 275 |
| Bse1I | ACTGG | 2 cut(s) | 84, 227 |
| Bse3DI | GCAATG | 1 cut(s) | 167 |
| BseDI | CCNNGG | 1 cut(s) | 143 |
| BseGI | GGATG | 3 cut(s) | 136, 364, 427 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 275 |
| BseMI | GCAATG | 1 cut(s) | 167 |
| BseNI | ACTGG | 2 cut(s) | 84, 227 |
| BslFI | GGGAC | 1 cut(s) | 16 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 275 |
| BsmFI | GGGAC | 1 cut(s) | 16 |
| Bsp19I | CCATGG | 1 cut(s) | 143 |
| BspACI | CCGC | 1 cut(s) | 324 |
| BspLI | GGNNCC | 1 cut(s) | 32 |
| BsrDI | GCAATG | 1 cut(s) | 167 |
| BsrI | ACTGG | 2 cut(s) | 84, 227 |
| BssECI | CCNNGG | 1 cut(s) | 143 |
| BssT1I | CCWWGG | 1 cut(s) | 143 |
| BstDSI | CCRYGG | 1 cut(s) | 143 |
| BstF5I | GGATG | 3 cut(s) | 136, 364, 427 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 166 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 393 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 186 |
| BtgI | CCRYGG | 1 cut(s) | 143 |
| BtsCI | GGATG | 3 cut(s) | 136, 364, 427 |
| BtsIMutI | CAGTG | 1 cut(s) | 234 |
| Cfr13I | GGNCC | 1 cut(s) | 30 |
| Csp6I | GTAC | 2 cut(s) | 210, 425 |
| CviAII | CATG | 4 cut(s) | 59, 144, 149, 338 |
| CviJI | RGCY | 2 cut(s) | 331, 437 |
| CviKI_1 | RGCY | 2 cut(s) | 331, 437 |
| CviQI | GTAC | 2 cut(s) | 210, 425 |
| Eco130I | CCWWGG | 1 cut(s) | 143 |
| Eco32I | GATATC | 1 cut(s) | 416 |
| Eco47I | GGWCC | 1 cut(s) | 30 |
| Eco57I | CTGAAG | 1 cut(s) | 449 |
| EcoRV | GATATC | 1 cut(s) | 416 |
| EcoT14I | CCWWGG | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 143 |
| FaeI | CATG | 4 cut(s) | 62, 147, 152, 341 |
| FaqI | GGGAC | 1 cut(s) | 16 |
| FatI | CATG | 4 cut(s) | 58, 143, 148, 337 |
| FokI | GGATG | 3 cut(s) | 123, 371, 434 |
| Hin1II | CATG | 4 cut(s) | 62, 147, 152, 341 |
| HincII | GTYRAC | 1 cut(s) | 154 |
| HindII | GTYRAC | 1 cut(s) | 154 |
| Hpy166II | GTNNAC | 2 cut(s) | 154, 224 |
| Hpy188I | TCNGA | 2 cut(s) | 184, 409 |
| Hpy188III | TCNNGA | 3 cut(s) | 118, 356, 419 |
| Hpy8I | GTNNAC | 2 cut(s) | 154, 224 |
| HpyCH4V | TGCA | 1 cut(s) | 109 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 166 |
| Hsp92II | CATG | 4 cut(s) | 62, 147, 152, 341 |
| LmnI | GCTCC | 1 cut(s) | 166 |
| LpnPI | CCDG | 7 cut(s) | 47, 97, 103, 179, 240, 341, 368 |
| MaeIII | GTNAC | 1 cut(s) | 364 |
| MboII | GAAGA | 2 cut(s) | 9, 393 |
| MluCI | AATT | 4 cut(s) | 54, 236, 311, 477 |
| MnlI | CCTC | 2 cut(s) | 19, 150 |
| MseI | TTAA | 1 cut(s) | 351 |
| MslI | CAYNNNNRTG | 2 cut(s) | 184, 255 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 166 |
| NcoI | CCATGG | 1 cut(s) | 143 |
| NlaIII | CATG | 4 cut(s) | 62, 147, 152, 341 |
| NlaIV | GGNNCC | 1 cut(s) | 32 |
| NmuCI | GTSAC | 1 cut(s) | 364 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PsiI | TTATAA | 1 cut(s) | 125 |
| PspN4I | GGNNCC | 1 cut(s) | 32 |
| PspPI | GGNCC | 1 cut(s) | 30 |
| RsaI | GTAC | 2 cut(s) | 211, 426 |
| RsaNI | GTAC | 2 cut(s) | 210, 425 |
| RseI | CAYNNNNRTG | 2 cut(s) | 184, 255 |
| SaqAI | TTAA | 1 cut(s) | 351 |
| Sau96I | GGNCC | 1 cut(s) | 30 |
| SetI | ASST | 4 cut(s) | 11, 198, 387, 439 |
| SinI | GGWCC | 1 cut(s) | 30 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 184, 255 |
| Sse9I | AATT | 4 cut(s) | 54, 236, 311, 477 |
| SsiI | CCGC | 1 cut(s) | 324 |
| SspI | AATATT | 1 cut(s) | 129 |
| StyI | CCWWGG | 1 cut(s) | 143 |
| TasI | AATT | 4 cut(s) | 54, 236, 311, 477 |
| TatI | WGTACW | 1 cut(s) | 424 |
| Tru1I | TTAA | 1 cut(s) | 351 |
| Tru9I | TTAA | 1 cut(s) | 351 |
| TscAI | CASTG | 1 cut(s) | 234 |
| TseFI | GTSAC | 1 cut(s) | 364 |
| Tsp45I | GTSAC | 1 cut(s) | 364 |
| TspDTI | ATGAA | 5 cut(s) | 47, 88, 125, 354, 377 |
| TspGWI | ACGGA | 1 cut(s) | 426 |
| TspRI | CASTG | 1 cut(s) | 234 |
| VpaK11BI | GGWCC | 1 cut(s) | 30 |
| XapI | RAATTY | 3 cut(s) | 54, 311, 477 |
| XceI | RCATGY | 1 cut(s) | 152 |