Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1213900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0345651 RchiOBHm_Chr2g0110921 RchiOBHm_Chr4g0407041 RchiOBHm_Chr7g0234401 |
| rosa_laevigata | RLG00000034027 |
| rosa_multiflora | Rmu_sc0001844.1_g000018 Rmu_sc0005996.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00118530 Rroxscaffold_2G00118840 Rroxscaffold_3G00254040 Rroxscaffold_4G00311990 Rroxscaffold_4G00315600 Rroxscaffold_4G00325350 Rroxscaffold_5G00352340 |
| rosa_rugosa | Rorug02G0250600 Rorug05G0413900 |
| rosa_samantha | Rh1AG217500 Rh1BG388800 Rh1CG202000 Rh1CG402100 Rh1DG419900 Rh1DG448000 Rh2AG059100 Rh2AG222200 Rh2BG233500 Rh2BG264300 Rh2DG230000 Rh2DG230100 Rh2DG436400 Rh2DG439700 Rh4BG153300 Rh5AG166500 Rh5DG372000 Rh6BG073700 Rh6BG201200 Rh7AG381500 Rh7BG117300 Rh7BG475600 Rh7CG401000 Rh7CG461100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 142, 165 |
| AcuI | CTGAAG | 1 cut(s) | 278 |
| AfaI | GTAC | 3 cut(s) | 64, 176, 255 |
| AflIII | ACRYGT | 1 cut(s) | 177 |
| AgsI | TTSAA | 1 cut(s) | 147 |
| AluBI | AGCT | 1 cut(s) | 266 |
| AluI | AGCT | 1 cut(s) | 266 |
| ApoI | RAATTY | 2 cut(s) | 142, 165 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 187, 219 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 54, 87 |
| BbsI | GAAGAC | 1 cut(s) | 222 |
| BccI | CCATC | 1 cut(s) | 39 |
| BfaI | CTAG | 1 cut(s) | 185 |
| BmiI | GGNNCC | 1 cut(s) | 121 |
| BpiI | GAAGAC | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 19 |
| BseGI | GGATG | 1 cut(s) | 256 |
| BseMI | GCAATG | 1 cut(s) | 19 |
| BspLI | GGNNCC | 1 cut(s) | 121 |
| BsrDI | GCAATG | 1 cut(s) | 19 |
| BstF5I | GGATG | 1 cut(s) | 256 |
| BstNSI | RCATGY | 1 cut(s) | 181 |
| BstV2I | GAAGAC | 1 cut(s) | 222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 38 |
| BtsCI | GGATG | 1 cut(s) | 256 |
| Csp6I | GTAC | 3 cut(s) | 63, 175, 254 |
| CviAII | CATG | 1 cut(s) | 178 |
| CviJI | RGCY | 2 cut(s) | 122, 266 |
| CviKI_1 | RGCY | 2 cut(s) | 122, 266 |
| CviQI | GTAC | 3 cut(s) | 63, 175, 254 |
| Eco57I | CTGAAG | 1 cut(s) | 278 |
| EcoRI | GAATTC | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 181 |
| FaiI | YATR | 4 cut(s) | 105, 179, 246, 295 |
| FatI | CATG | 1 cut(s) | 177 |
| FokI | GGATG | 1 cut(s) | 263 |
| FspBI | CTAG | 1 cut(s) | 185 |
| Hin1II | CATG | 1 cut(s) | 181 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 3 cut(s) | 36, 238, 311 |
| Hpy188III | TCNNGA | 1 cut(s) | 185 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 12 |
| HpyCH4V | TGCA | 1 cut(s) | 303 |
| Hsp92II | CATG | 1 cut(s) | 181 |
| LmnI | GCTCC | 1 cut(s) | 119 |
| LpnPI | CCDG | 3 cut(s) | 31, 157, 197 |
| MaeI | CTAG | 1 cut(s) | 185 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MboII | GAAGA | 1 cut(s) | 222 |
| MluCI | AATT | 3 cut(s) | 89, 142, 165 |
| MslI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| NlaIII | CATG | 1 cut(s) | 181 |
| NlaIV | GGNNCC | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 193 |
| NspI | RCATGY | 1 cut(s) | 181 |
| PciI | ACATGT | 1 cut(s) | 177 |
| PscI | ACATGT | 1 cut(s) | 177 |
| PspN4I | GGNNCC | 1 cut(s) | 121 |
| RsaI | GTAC | 3 cut(s) | 64, 176, 255 |
| RsaNI | GTAC | 3 cut(s) | 63, 175, 254 |
| RseI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| SetI | ASST | 3 cut(s) | 50, 216, 268 |
| SgeI | CNNG | 8 cut(s) | 21, 58, 109, 151, 184, 190, 197, 224 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| Sse9I | AATT | 3 cut(s) | 89, 142, 165 |
| SspMI | CTAG | 1 cut(s) | 185 |
| TasI | AATT | 3 cut(s) | 89, 142, 165 |
| TatI | WGTACW | 1 cut(s) | 253 |
| TseFI | GTSAC | 1 cut(s) | 193 |
| Tsp45I | GTSAC | 1 cut(s) | 193 |
| TspDTI | ATGAA | 3 cut(s) | 98, 206, 222 |
| TspGWI | ACGGA | 1 cut(s) | 255 |
| XapI | RAATTY | 2 cut(s) | 142, 165 |
| XbaI | TCTAGA | 1 cut(s) | 184 |
| XceI | RCATGY | 1 cut(s) | 181 |
| XspI | CTAG | 1 cut(s) | 185 |