Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1213900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0345651 RchiOBHm_Chr2g0110921 RchiOBHm_Chr4g0407041 RchiOBHm_Chr7g0234401 |
| rosa_laevigata | RLG00000034027 |
| rosa_multiflora | Rmu_sc0001844.1_g000018 Rmu_sc0005996.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00118530 Rroxscaffold_2G00118840 Rroxscaffold_3G00254040 Rroxscaffold_4G00311990 Rroxscaffold_4G00315600 Rroxscaffold_4G00325350 Rroxscaffold_5G00352340 |
| rosa_rugosa | Rorug02G0250600 Rorug05G0413900 |
| rosa_samantha | Rh1AG217500 Rh1BG388800 Rh1CG202000 Rh1CG402100 Rh1DG419900 Rh1DG448000 Rh2AG059100 Rh2AG222200 Rh2BG233500 Rh2BG264300 Rh2DG230000 Rh2DG230100 Rh2DG436400 Rh2DG439700 Rh4BG153300 Rh5AG166500 Rh5DG372000 Rh6BG073700 Rh6BG201200 Rh7AG381500 Rh7BG117300 Rh7BG475600 Rh7CG401000 Rh7CG461100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 151 |
| AciI | CCGC | 1 cut(s) | 186 |
| AcsI | RAATTY | 1 cut(s) | 173 |
| AcuI | CTGAAG | 1 cut(s) | 287 |
| AfaI | GTAC | 2 cut(s) | 144, 264 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 248 |
| AluBI | AGCT | 1 cut(s) | 275 |
| AluI | AGCT | 1 cut(s) | 275 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| ApoI | RAATTY | 1 cut(s) | 173 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 220, 252 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 54, 87 |
| BbvI | GCAGC | 1 cut(s) | 218 |
| BccI | CCATC | 1 cut(s) | 39 |
| BfaI | CTAG | 1 cut(s) | 218 |
| BisI | GCNGC | 1 cut(s) | 207 |
| BlsI | GCNGC | 1 cut(s) | 208 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 2 cut(s) | 128, 129 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 248 |
| Bse1I | ACTGG | 2 cut(s) | 80, 112 |
| Bse3DI | GCAATG | 1 cut(s) | 19 |
| BseGI | GGATG | 1 cut(s) | 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 248 |
| BseMI | GCAATG | 1 cut(s) | 19 |
| BseNI | ACTGG | 2 cut(s) | 80, 112 |
| BseXI | GCAGC | 1 cut(s) | 218 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 248 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| BspACI | CCGC | 1 cut(s) | 186 |
| BspLI | GGNNCC | 2 cut(s) | 128, 129 |
| BsrDI | GCAATG | 1 cut(s) | 19 |
| BsrI | ACTGG | 2 cut(s) | 80, 112 |
| BssNAI | GTATAC | 1 cut(s) | 152 |
| Bst1107I | GTATAC | 1 cut(s) | 152 |
| BstF5I | GGATG | 1 cut(s) | 265 |
| BstV1I | GCAGC | 1 cut(s) | 218 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 38 |
| BstZ17I | GTATAC | 1 cut(s) | 152 |
| BtsCI | GGATG | 1 cut(s) | 265 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| Csp6I | GTAC | 2 cut(s) | 143, 263 |
| CviAII | CATG | 1 cut(s) | 200 |
| CviJI | RGCY | 2 cut(s) | 193, 275 |
| CviKI_1 | RGCY | 2 cut(s) | 193, 275 |
| CviQI | GTAC | 2 cut(s) | 143, 263 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 1 cut(s) | 287 |
| EcoO109I | RGGNCCY | 1 cut(s) | 127 |
| FaeI | CATG | 1 cut(s) | 203 |
| FaiI | YATR | 5 cut(s) | 105, 152, 201, 255, 304 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FatI | CATG | 1 cut(s) | 199 |
| FblI | GTMKAC | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 1 cut(s) | 207 |
| FokI | GGATG | 1 cut(s) | 272 |
| Fsp4HI | GCNGC | 1 cut(s) | 207 |
| FspBI | CTAG | 1 cut(s) | 218 |
| GluI | GCNGC | 1 cut(s) | 207 |
| Hin1II | CATG | 1 cut(s) | 203 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 77, 152 |
| Hpy188I | TCNGA | 1 cut(s) | 36 |
| Hpy188III | TCNNGA | 1 cut(s) | 218 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 77, 152 |
| HpyAV | CCTTC | 1 cut(s) | 12 |
| Hsp92II | CATG | 1 cut(s) | 203 |
| KflI | GGGWCCC | 1 cut(s) | 127 |
| LpnPI | CCDG | 4 cut(s) | 31, 93, 93, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 218 |
| MaeI | CTAG | 1 cut(s) | 218 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MluCI | AATT | 2 cut(s) | 89, 173 |
| MseI | TTAA | 1 cut(s) | 213 |
| MslI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| NlaIII | CATG | 1 cut(s) | 203 |
| NlaIV | GGNNCC | 2 cut(s) | 128, 129 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| PkrI | GCNGC | 1 cut(s) | 208 |
| PpuMI | RGGWCCY | 1 cut(s) | 127 |
| Psp5II | RGGWCCY | 1 cut(s) | 127 |
| PspN4I | GGNNCC | 2 cut(s) | 128, 129 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| PspPPI | RGGWCCY | 1 cut(s) | 127 |
| RsaI | GTAC | 2 cut(s) | 144, 264 |
| RsaNI | GTAC | 2 cut(s) | 143, 263 |
| RseI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| SaqAI | TTAA | 1 cut(s) | 213 |
| SatI | GCNGC | 1 cut(s) | 207 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| SetI | ASST | 2 cut(s) | 50, 277 |
| SinI | GGWCC | 1 cut(s) | 127 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 36, 108 |
| Sse9I | AATT | 2 cut(s) | 89, 173 |
| SsiI | CCGC | 1 cut(s) | 186 |
| SspMI | CTAG | 1 cut(s) | 218 |
| TasI | AATT | 2 cut(s) | 89, 173 |
| TatI | WGTACW | 1 cut(s) | 262 |
| Tru1I | TTAA | 1 cut(s) | 213 |
| Tru9I | TTAA | 1 cut(s) | 213 |
| TscAI | CASTG | 1 cut(s) | 87 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| TseI | GCWGC | 1 cut(s) | 206 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 216 |
| TspRI | CASTG | 1 cut(s) | 87 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XapI | RAATTY | 1 cut(s) | 173 |
| XbaI | TCTAGA | 1 cut(s) | 217 |
| XmiI | GTMKAC | 1 cut(s) | 151 |
| XspI | CTAG | 1 cut(s) | 218 |