Rmu_sc0005996.1_g000031

Guanosine nucleotide diphosphate dissociation inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005996.1
OG0002551
Physical Location & Seq
Forward (+)
146625 .. 147378
754 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005996.1_g000031.1.cds

Sequence Viewer

Length: 300 bp
atgcaggcatttgcacgacttagtgcggtttatggtggtacttatatgcttaataaacctgaatgcaaggtggagttcaatgaggaagggaaagttattggtgtcacatctgaaggtgaaactgccaagtgcactaaagttgtctgtgacccttcttacttacccaacaaggtcagaaaggttggtaaggttgcaagggctatagccataatgagccacccaattccaaacacaaatgattctcattcagtgcaggttatcctgccacaaaagcagctgggtcacagatcagatatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDI

Protein Analysis

99

Amino Acids

10.85

Weight (kDa)

9.1

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 244
AciI CCGC 1 cut(s) 26
AcuI CTGAAG 1 cut(s) 132
AfaI GTAC 1 cut(s) 40
AgsI TTSAA 1 cut(s) 79
AluBI AGCT 1 cut(s) 277
AluI AGCT 1 cut(s) 277
Alw21I GWGCWC 1 cut(s) 134
Alw44I GTGCAC 1 cut(s) 130
ApaLI GTGCAC 1 cut(s) 130
ApeKI GCWGC 1 cut(s) 274
AsuHPI GGTGA 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 134
BbvI GCAGC 1 cut(s) 286
BfmI CTRYAG 1 cut(s) 201
BfuAI ACCTGC 1 cut(s) 244
BisI GCNGC 1 cut(s) 275
BlsI GCNGC 1 cut(s) 276
BseSI GKGCMC 1 cut(s) 134
BseXI GCAGC 1 cut(s) 286
BseYI CCCAGC 1 cut(s) 277
BsgI GTGCAG 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 134
BsmI GAATGC 1 cut(s) 68
Bsp1286I GDGCHC 1 cut(s) 134
Bsp143I GATC 1 cut(s) 287
BspACI CCGC 1 cut(s) 26
BspMI ACCTGC 1 cut(s) 244
BssMI GATC 1 cut(s) 287
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 20
BstKTI GATC 1 cut(s) 290
BstMBI GATC 1 cut(s) 287
BstMWI GCNNNNNNNGC 1 cut(s) 271
BstSFI CTRYAG 1 cut(s) 201
BstSLI GKGCMC 1 cut(s) 134
BstV1I GCAGC 1 cut(s) 286
BtsIMutI CAGTG 1 cut(s) 255
BveI ACCTGC 1 cut(s) 244
Cac8I GCNNGC 1 cut(s) 6
Csp6I GTAC 1 cut(s) 39
CviJI RGCY 4 cut(s) 200, 206, 216, 277
CviKI_1 RGCY 4 cut(s) 200, 206, 216, 277
CviQI GTAC 1 cut(s) 39
DdeI CTNAG 1 cut(s) 20
DpnI GATC 1 cut(s) 289
DpnII GATC 1 cut(s) 287
Eco57I CTGAAG 1 cut(s) 132
FaiI YATR 6 cut(s) 33, 45, 47, 203, 209, 296
Fnu4HI GCNGC 1 cut(s) 275
Fsp4HI GCNGC 1 cut(s) 275
GluI GCNGC 1 cut(s) 275
GsaI CCCAGC 1 cut(s) 281
HinfI GANTC 1 cut(s) 239
HphI GGTGA 1 cut(s) 128
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 3 cut(s) 112, 176, 292
Hpy8I GTNNAC 1 cut(s) 132
HpyAV CCTTC 3 cut(s) 80, 107, 162
HpyCH4V TGCA 6 cut(s) 4, 14, 66, 132, 194, 253
HpyF10VI GCNNNNNNNGC 1 cut(s) 271
HpyF3I CTNAG 1 cut(s) 20
Kzo9I GATC 1 cut(s) 287
LpnPI CCDG 4 cut(s) 72, 239, 263, 275
Lsp1109I GCAGC 1 cut(s) 286
MaeIII GTNAC 3 cut(s) 103, 146, 281
MalI GATC 1 cut(s) 289
MboI GATC 1 cut(s) 287
MhlI GDGCHC 1 cut(s) 134
MluCI AATT 1 cut(s) 222
MnlI CCTC 1 cut(s) 76
MseI TTAA 1 cut(s) 51
MspA1I CMGCKG 1 cut(s) 277
Mva1269I GAATGC 1 cut(s) 68
MwoI GCNNNNNNNGC 1 cut(s) 271
NdeII GATC 1 cut(s) 287
NmuCI GTSAC 3 cut(s) 103, 146, 281
PctI GAATGC 1 cut(s) 68
PfeI GAWTC 1 cut(s) 239
PkrI GCNGC 1 cut(s) 276
PspFI CCCAGC 1 cut(s) 277
PvuII CAGCTG 1 cut(s) 277
RsaI GTAC 1 cut(s) 40
RsaNI GTAC 1 cut(s) 39
SaqAI TTAA 1 cut(s) 51
SatI GCNGC 1 cut(s) 275
Sau3AI GATC 1 cut(s) 287
SduI GDGCHC 1 cut(s) 134
SetI ASST 8 cut(s) 61, 72, 118, 174, 183, 192, 258, 279
SfcI CTRYAG 1 cut(s) 201
Sse9I AATT 1 cut(s) 222
SsiI CCGC 1 cut(s) 26
TasI AATT 1 cut(s) 222
TfiI GAWTC 1 cut(s) 239
Tru1I TTAA 1 cut(s) 51
Tru9I TTAA 1 cut(s) 51
TscAI CASTG 1 cut(s) 255
TseFI GTSAC 3 cut(s) 103, 146, 281
TseI GCWGC 1 cut(s) 274
Tsp45I GTSAC 3 cut(s) 103, 146, 281
TspRI CASTG 1 cut(s) 255
VneI GTGCAC 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.