Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1213900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0345651 RchiOBHm_Chr2g0110921 RchiOBHm_Chr4g0407041 RchiOBHm_Chr7g0234401 |
| rosa_laevigata | RLG00000034027 |
| rosa_multiflora | Rmu_sc0001844.1_g000018 Rmu_sc0005996.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00118530 Rroxscaffold_2G00118840 Rroxscaffold_3G00254040 Rroxscaffold_4G00311990 Rroxscaffold_4G00315600 Rroxscaffold_4G00325350 Rroxscaffold_5G00352340 |
| rosa_rugosa | Rorug02G0250600 Rorug05G0413900 |
| rosa_samantha | Rh1AG217500 Rh1BG388800 Rh1CG202000 Rh1CG402100 Rh1DG419900 Rh1DG448000 Rh2AG059100 Rh2AG222200 Rh2BG233500 Rh2BG264300 Rh2DG230000 Rh2DG230100 Rh2DG436400 Rh2DG439700 Rh4BG153300 Rh5AG166500 Rh5DG372000 Rh6BG073700 Rh6BG201200 Rh7AG381500 Rh7BG117300 Rh7BG475600 Rh7CG401000 Rh7CG461100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 255 |
| AcsI | RAATTY | 2 cut(s) | 242, 408 |
| AcuI | CTGAAG | 1 cut(s) | 380 |
| AfaI | GTAC | 2 cut(s) | 142, 357 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AgsI | TTSAA | 2 cut(s) | 25, 224 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 189, 221 |
| AluBI | AGCT | 2 cut(s) | 7, 368 |
| AluI | AGCT | 2 cut(s) | 7, 368 |
| ApoI | RAATTY | 2 cut(s) | 242, 408 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 289, 321 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 1 cut(s) | 381 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 48, 80 |
| BbsI | GAAGAC | 1 cut(s) | 324 |
| BccI | CCATC | 2 cut(s) | 118, 143 |
| BpiI | GAAGAC | 1 cut(s) | 324 |
| BsaJI | CCNNGG | 1 cut(s) | 74 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| Bse1I | ACTGG | 1 cut(s) | 158 |
| Bse3DI | GCAATG | 1 cut(s) | 98 |
| BseDI | CCNNGG | 1 cut(s) | 74 |
| BseGI | GGATG | 3 cut(s) | 67, 295, 358 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseMI | GCAATG | 1 cut(s) | 98 |
| BseNI | ACTGG | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| Bsp19I | CCATGG | 1 cut(s) | 74 |
| BspACI | CCGC | 1 cut(s) | 255 |
| BsrDI | GCAATG | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 158 |
| BssECI | CCNNGG | 1 cut(s) | 74 |
| BssT1I | CCWWGG | 1 cut(s) | 74 |
| BstDSI | CCRYGG | 1 cut(s) | 74 |
| BstF5I | GGATG | 3 cut(s) | 67, 295, 358 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 97 |
| BstNSI | RCATGY | 1 cut(s) | 83 |
| BstV2I | GAAGAC | 1 cut(s) | 324 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 117 |
| BtgI | CCRYGG | 1 cut(s) | 74 |
| BtsCI | GGATG | 3 cut(s) | 67, 295, 358 |
| BtsIMutI | CAGTG | 1 cut(s) | 165 |
| Csp6I | GTAC | 2 cut(s) | 141, 356 |
| CviAII | CATG | 2 cut(s) | 75, 80 |
| CviJI | RGCY | 3 cut(s) | 7, 262, 368 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 262, 368 |
| CviQI | GTAC | 2 cut(s) | 141, 356 |
| Eco130I | CCWWGG | 1 cut(s) | 74 |
| Eco32I | GATATC | 1 cut(s) | 347 |
| Eco57I | CTGAAG | 1 cut(s) | 380 |
| EcoRV | GATATC | 1 cut(s) | 347 |
| EcoT14I | CCWWGG | 1 cut(s) | 74 |
| ErhI | CCWWGG | 1 cut(s) | 74 |
| FaeI | CATG | 2 cut(s) | 78, 83 |
| FaiI | YATR | 4 cut(s) | 76, 81, 183, 397 |
| FatI | CATG | 2 cut(s) | 74, 79 |
| FokI | GGATG | 3 cut(s) | 54, 302, 365 |
| Hin1II | CATG | 2 cut(s) | 78, 83 |
| HincII | GTYRAC | 1 cut(s) | 85 |
| HindII | GTYRAC | 1 cut(s) | 85 |
| HphI | GGTGA | 1 cut(s) | 381 |
| Hpy166II | GTNNAC | 2 cut(s) | 85, 155 |
| Hpy188I | TCNGA | 3 cut(s) | 115, 196, 340 |
| Hpy188III | TCNNGA | 3 cut(s) | 49, 287, 350 |
| Hpy8I | GTNNAC | 2 cut(s) | 85, 155 |
| HpyAV | CCTTC | 1 cut(s) | 26 |
| HpyCH4V | TGCA | 1 cut(s) | 40 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 97 |
| Hsp92II | CATG | 2 cut(s) | 78, 83 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 6 cut(s) | 34, 110, 171, 254, 272, 299 |
| MaeIII | GTNAC | 1 cut(s) | 295 |
| MboII | GAAGA | 1 cut(s) | 324 |
| MluCI | AATT | 3 cut(s) | 167, 242, 408 |
| MnlI | CCTC | 1 cut(s) | 81 |
| MseI | TTAA | 2 cut(s) | 186, 282 |
| MslI | CAYNNNNRTG | 2 cut(s) | 115, 186 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 97 |
| NcoI | CCATGG | 1 cut(s) | 74 |
| NlaIII | CATG | 2 cut(s) | 78, 83 |
| NmuCI | GTSAC | 1 cut(s) | 295 |
| NspI | RCATGY | 1 cut(s) | 83 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| RsaI | GTAC | 2 cut(s) | 142, 357 |
| RsaNI | GTAC | 2 cut(s) | 141, 356 |
| RseI | CAYNNNNRTG | 2 cut(s) | 115, 186 |
| SaqAI | TTAA | 2 cut(s) | 186, 282 |
| SetI | ASST | 4 cut(s) | 9, 129, 318, 370 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 115, 186 |
| Sse9I | AATT | 3 cut(s) | 167, 242, 408 |
| SsiI | CCGC | 1 cut(s) | 255 |
| SspI | AATATT | 1 cut(s) | 60 |
| StyI | CCWWGG | 1 cut(s) | 74 |
| TasI | AATT | 3 cut(s) | 167, 242, 408 |
| TatI | WGTACW | 1 cut(s) | 355 |
| Tru1I | TTAA | 2 cut(s) | 186, 282 |
| Tru9I | TTAA | 2 cut(s) | 186, 282 |
| TscAI | CASTG | 1 cut(s) | 165 |
| TseFI | GTSAC | 1 cut(s) | 295 |
| Tsp45I | GTSAC | 1 cut(s) | 295 |
| TspDTI | ATGAA | 4 cut(s) | 17, 19, 56, 308 |
| TspGWI | ACGGA | 1 cut(s) | 357 |
| TspRI | CASTG | 1 cut(s) | 165 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XapI | RAATTY | 2 cut(s) | 242, 408 |
| XceI | RCATGY | 1 cut(s) | 83 |