RchiOBHm_Chr2g0172271

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002210
Physical Location & Seq
Reverse (-)
85716283 .. 85720310
4028 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53956

Sequence Viewer

Length: 3264 bp
ATGGGGACGTTGGGGAGATCTACAGCCGTAGCTGATGGTTGCTCGGGTGGCTCCGGGCCGGGTCCTGGACCGGCGAGGTTTGAGGCCGGGGAGGAGAGGAGGAGGATTGACGACTCGGGTGGGAGCCGGGTCGGGTCGGGAGGGTCCGGAGGGGAGCTGGTGAGGTCGTTCGTTGAGCTGGTTAAGACTGTGGAGGCTAAAGTCTCGGTTGGGATGAGTTTTGGGGACATGGACACGTGTATGTCGAGGTTGAGAGGGAGTGAGAGCGTTGGAGAGCTGGAGTCTGGTTTGGGTGAGGAGAGGAGAGTAGTGAGCATTGGTTCGAAGACGAATTCGGATGCGAATGTAGGGGGGGATGAGGACAATGGGAATTGTTGTGATGAAACCAAGGCCAACGGTGTTGGGGTTGAGGAGAATGGCAAGTGTTTGGATGAAATTGTGGAAGAGCTCGATGGGGGAATTGAGGTTCCCATTGCCGGTACGAGTGACAATGGTGAGGACCGGGTGGGAGAAGAGTTGAGTGATGGAGTGAATGAGTTCTGTATCGGAGATTTTGTGTGGGGTAAGATTAAGAACCACCCGTGGTGGCCGGGCCAGATTTGTGATCCTTCGGATGCTTCTGAGTTTGCAGTGAAGTTGAGATCCAAGGACAAACTTCTTGTAGCGTACTTTGGGGATGACACTTTTGCGTGGTGCCATCCGTCGCAATTGAAACCCTTTGAGGAAAATTTCGTGGAGAATTCTAAGCTGAGTAGCTCCAAGGTTTTTGTTATTGCTGTGCAGAAGGCTGTGGATGAGATAGGTAGGCTTGTAAAGTTGAAGATGAGTTGCGCTTGCATGGGGGAAGAGTTTCTAAGTGGTCGTAAACAGCCTTTAGCATCGAATGCTGGAGTTAAGGAAGGAGTTGTTGTCCCTGAAGGCCGAGTTGGGAAGTTTTTGGGTCATCTATCTCAGCCGGTTGACCTTCTTGCGGAATTGAAACATATGGCACAAGCTGTATCCTTGACTAGTGTTCTTGAGCTCAATGTATTAAAGAGTTTGCTGTCTGCCTTTTATTGTTCGAAAGGGGGATATCAGTTACCTGTTTACATTGAACCCCAGCTAATTCCTGGTCTTGAAGATGAGCGGAAGATGGTGGAAGTCCCAGTGCAGTGGCCATCTGATGACAGGTCGTCTTCTCCCATAGGCTCCAATACTGGAAACACTGAACAAAATTTGTTGCAAAGGTCACCACCAAGTATAGAAAATAGACAGCCCCATAAAAGGAAGGAGAAGACCATTGCTGATCTTCTTGGAGAAGCCAATCGTGTTGAGGTAAAAAGTATGGATGGGGTTGTAGCTAAAGAAAGTGCAATCTCAGAGAAACGAGGGCTATCATCCAGACGGAAGAAGCAAAAAAGCAGTGATATTCATGGTGAGGGTAGATTGACTTTCGAATCAGGAAGGGAAAGAGCCAAACTCTCAAAATCGCCCACAAGCACTTTAGCGAGGAGAAAGGAAGAAGATGAAGGTATTGGCATCGAGAGCAGTGATGGTTTGGCTAAAGAGAGTGCTGGTGGAAATGAAGAAACTAAGAAGACTCCTCTCTCAAGGAAAAGGAAGAGGGATGAAGATAGCATCGACAGTAAAGATGGTGATACCCAAGAAAAAAGTGGTGAAAAGGATGAAACTAAGAAGGCTCCGTTGTCAAGGAGAAGGAAGAAGAATGAAGATATTCACATCAACAGTAATGATGGTGAGGCCAAAGGAAAAGCTGGTGCAAGAGTGGGGGAGTTGCTCAATGTTGGTTTACAAACAGATATGAAAGACCAAACTGGTAAGAGCCCTTTGTTGAGGGAAAGAAAAAAAAGCAAGTACTTGTCCCCACCCTTCACAATAAGTGACGCAGGGAAAAGAAAACGAAACTTGGAAACAGAATCTCGAAATGCTGTAACGAGTCATGATTTGGGGAAAGAGGGGAAAGAGCAAGACATGGAATCAGTATTATCTCTGGAGGTTTCTAGTAAAGCTCAGCTTGGGGACAGGATTACCAGGGATGCTGCCAACATTAAGGGGTCCCCTCAGATTTTGAATAGTTGCAGTGAGGCATTACAAGAGAAACTCTCAATAGAAGGTGGGAATAAGAGCACTGATGTTAAAACACCAGCAGAAGGTGAGAAGAAGCGTGTTGATCCGATAAAAGCTAATGCAGCCACTAATGAAGTGCTGTCTGGAGTCCGCTCTGCAGCTCTTGATCCATTATATCCAGTCAAAAGGAAATCCTCCTTTGAGATTGTTGTTGATTTTGTGTCCATATTTAGAGACTCAGTTTACCACAATGGCTGCTACCACAAGGTTTACAAGAAGCACCAACCTCATGGAAAGAGGAAGAGATCAGATTCTGAACTGGGGTCATTGGTGAAAGACAATCGAACTGCTGCAAATTTGCATGAAGATGAATCTGGTAACAGGGTTATTAAGAAGAAACAAGATATGAAGTCTGATAAGCCTACAAAAAAGCAAGCTGGTGAGACACGAAGTTCAAAGAGAAGGAAGTTAAATTCTGTAATTAAGTCGTTGGGAAAAGACAATGAGAAAACAGAAAATCAGCCTGTCAGTGAATCTGGGAAGAGGAACATCAACACTAACCAAGATAAGCCTAAGAAAAAGCAAGCTGCTGAGCCACCAATTTCAAAGCTGGTCAGGCGGAGATCAAAGCATGCTGACACTCGGGATTTGAAGATTAAGGAGACGGAAGAGGAGGCTCCGCCTACATTCCTTTTTGTAACATTTGGACCTGGATCCTCGCTGCCTACCAAGGATGATCTTCTCAGATTATACAGTAAATTTGGGGAACTAAATGAAACTGAAACTGAGATGTTCTACACCAATTTCTGTGCTCGTGTTGCGTTTGTAATGAGCTCGGACGCGGAAGAAGCCTTCAATCATTCTCTAATTGACAGTCCCTTTGGAGCATCCAATGTAAATTTCCGCCTCCAAAATCCCTCAGGTGCTTCCAAGACTCGTGAGCTCAGTGCAATACCCGAGTCTCCTCCGGCTAAGAAGAAGTCCAGGGGCAAGACTGCAAGTGAGGCATTAGTAGCTTCACAACCACCTGCTGGTGAGCCCTCGCAAGTTGATTTCATTAGGCATAGACTTAAGATGATGAGCTCAATGCTGGGAAACTCAGATCGCAAAGTGTCGCCTGTTGCAACATCGAAAATTCAGAATGAGATAAAGGAGCTACTGAAGGTCGTAAGCACAATGGGTGAATCCTCATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

1087

Amino Acids

118.59

Weight (kDa)

8.57

Isoelectric Point (pI)

54.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 183 - 266 5.8e-20 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3103
Acc36I ACCTGC 1 cut(s) 3103
AccB1I GGYRCC 1 cut(s) 693
AccB7I CCANNNNNTGG 1 cut(s) 3098
AccBSI CCGCTC 2 cut(s) 1126, 2220
AccII CGCG 1 cut(s) 2909
AccIII TCCGGA 1 cut(s) 146
AciI CCGC 7 cut(s) 971, 1126, 2218, 2686, 2747, 2909, 2971
AclWI GGATC 6 cut(s) 599, 636, 2165, 2228, 2775, 2788
AcoI YGGCCR 2 cut(s) 587, 1154
AcsI RAATTY 9 cut(s) 331, 727, 739, 1213, 2422, 2539, 2825, 2965, 3201
AcuI CTGAAG 2 cut(s) 936, 3248
AcvI CACGTG 1 cut(s) 237
AfaI GTAC 3 cut(s) 481, 668, 1856
AfiI CCNNNNNNNGG 6 cut(s) 65, 476, 970, 1263, 2150, 3098
AflII CTTAAG 1 cut(s) 3137
AflIII ACRYGT 2 cut(s) 234, 236
AhdI GACNNNNNGTC 1 cut(s) 1171
AhlI ACTAGT 1 cut(s) 1007
AjnI CCWGG 5 cut(s) 64, 1108, 2030, 2776, 3050
AjuI GAANNNNNNNTTGG 4 cut(s) 909, 941, 2951, 2983
AloI GAACNNNNNNTCC 2 cut(s) 450, 482
Alw21I GWGCWC 7 cut(s) 450, 1023, 2129, 2881, 2903, 3012, 3152
Alw26I GTCTC 5 cut(s) 208, 2295, 2504, 2723, 3033
AlwI GGATC 6 cut(s) 599, 636, 2165, 2228, 2775, 2788
AlwNI CAGNNNCTG 1 cut(s) 2381
Ama87I CYCGRG 4 cut(s) 43, 115, 2709, 3023
Aor13HI TCCGGA 1 cut(s) 146
AoxI GGCC 8 cut(s) 56, 84, 390, 587, 592, 919, 1154, 1740
ApeKI GCWGC 7 cut(s) 2039, 2189, 2225, 2322, 2417, 2654, 2788
ApoI RAATTY 9 cut(s) 331, 727, 739, 1213, 2422, 2539, 2825, 2965, 3201
ArsI GACNNNNNNTTYG 2 cut(s) 2930, 2962
Asp700I GAANNNNTTC 3 cut(s) 536, 849, 1713
AspLEI GCGC 1 cut(s) 833
AspS9I GGNCC 8 cut(s) 56, 62, 68, 144, 499, 592, 2055, 2774
AsuC2I CCSGG 6 cut(s) 55, 60, 88, 128, 503, 591
AsuII TTCGAA 3 cut(s) 323, 1061, 1434
AvaI CYCGRG 4 cut(s) 43, 115, 2709, 3023
AvaII GGWCC 6 cut(s) 62, 68, 144, 499, 2055, 2774
AxyI CCTNAGG 1 cut(s) 2986
BalI TGGCCA 1 cut(s) 1156
BamHI GGATCC 1 cut(s) 2780
BanI GGYRCC 1 cut(s) 693
BanII GRGCYC 7 cut(s) 450, 1023, 1826, 2903, 3012, 3108, 3152
BauI CACGAG 2 cut(s) 2880, 3003
BbrPI CACGTG 1 cut(s) 237
BbsI GAAGAC 4 cut(s) 332, 1167, 1280, 1583
Bbv12I GWGCWC 7 cut(s) 450, 1023, 2129, 2881, 2903, 3012, 3152
BbvI GCAGC 7 cut(s) 2026, 2201, 2237, 2309, 2404, 2641, 2775
BceAI ACGGC 1 cut(s) 11
BciT130I CCWGG 5 cut(s) 66, 1110, 2032, 2778, 3052
BciVI GTATCC 1 cut(s) 1009
BcnI CCSGG 6 cut(s) 55, 60, 88, 128, 503, 591
BcoDI GTCTC 5 cut(s) 208, 2295, 2504, 2723, 3033
BcuI ACTAGT 1 cut(s) 1007
BfaI CTAG 2 cut(s) 1008, 2001
BfmI CTRYAG 2 cut(s) 21, 2223
BfrI CTTAAG 1 cut(s) 3137
BfuAI ACCTGC 1 cut(s) 3103
BfuI GTATCC 1 cut(s) 1009
BglII AGATCT 1 cut(s) 17
BisI GCNGC 7 cut(s) 2040, 2190, 2226, 2323, 2418, 2655, 2789
BlpI GCTNAGC 2 cut(s) 2010, 2658
BlsI GCNGC 7 cut(s) 2041, 2191, 2227, 2324, 2419, 2656, 2790
BmcAI AGTACT 1 cut(s) 1856
Bme18I GGWCC 6 cut(s) 62, 68, 144, 499, 2055, 2774
BmeRI GACNNNNNGTC 1 cut(s) 1171
BmeT110I CYCGRG 4 cut(s) 43, 115, 2709, 3023
BmgT120I GGNCC 8 cut(s) 56, 62, 68, 144, 499, 592, 2055, 2774
BmrI ACTGGG 2 cut(s) 1139, 2396
BmsI GCATC 7 cut(s) 328, 604, 887, 1527, 1626, 2026, 2963
BmuI ACTGGG 2 cut(s) 1139, 2396
BpiI GAAGAC 4 cut(s) 332, 1167, 1280, 1583
BplI GAGNNNNNCTC 4 cut(s) 1443, 1475, 2087, 2119
BpmI CTGGAG 4 cut(s) 299, 909, 2012, 2232
Bpu1102I GCTNAGC 2 cut(s) 2010, 2658
Bpu14I TTCGAA 3 cut(s) 323, 1061, 1434
BpuEI CTTGAG 2 cut(s) 1037, 1573
BpuMI CCSGG 6 cut(s) 55, 60, 88, 128, 503, 591
BsaAI YACGTR 1 cut(s) 237
BsaJI CCNNGG 8 cut(s) 87, 387, 581, 645, 759, 2031, 2796, 3051
BsaWI WCCGGW 1 cut(s) 146
BsaXI ACNNNNNCTCC 4 cut(s) 540, 570, 894, 924
Bsc4I CCNNNNNNNGG 6 cut(s) 65, 476, 970, 1263, 2150, 3098
Bse118I RCCGGY 3 cut(s) 70, 476, 955
Bse1I ACTGG 5 cut(s) 1145, 1201, 1819, 2246, 2391
Bse21I CCTNAGG 1 cut(s) 2986
Bse3DI GCAATG 2 cut(s) 471, 1278
BseAI TCCGGA 1 cut(s) 146
BseBI CCWGG 5 cut(s) 66, 1110, 2032, 2778, 3052
BseDI CCNNGG 8 cut(s) 87, 387, 581, 645, 759, 2031, 2796, 3051
BseLI CCNNNNNNNGG 6 cut(s) 65, 476, 970, 1263, 2150, 3098
BseMI GCAATG 2 cut(s) 471, 1278
BseNI ACTGG 5 cut(s) 1145, 1201, 1819, 2246, 2391
BseXI GCAGC 7 cut(s) 2026, 2201, 2237, 2309, 2404, 2641, 2775
BseYI CCCAGC 2 cut(s) 1098, 3157
BsgI GTGCAG 2 cut(s) 800, 1169
Bsh1236I CGCG 1 cut(s) 2909
BshFI GGCC 8 cut(s) 58, 86, 392, 589, 594, 921, 1156, 1742
BshNI GGYRCC 1 cut(s) 693
BsiHKAI GWGCWC 7 cut(s) 450, 1023, 2129, 2881, 2903, 3012, 3152
BsiHKCI CYCGRG 4 cut(s) 43, 115, 2709, 3023
BslFI GGGAC 8 cut(s) 19, 239, 896, 1127, 1846, 2033, 2041, 2928
BslI CCNNNNNNNGG 6 cut(s) 65, 476, 970, 1263, 2150, 3098
BsmAI GTCTC 5 cut(s) 208, 2295, 2504, 2723, 3033
BsmBI CGTCTC 1 cut(s) 2723
BsmFI GGGAC 8 cut(s) 19, 239, 896, 1127, 1846, 2033, 2041, 2928
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 8 cut(s) 58, 86, 392, 589, 594, 921, 1156, 1742
BsoBI CYCGRG 4 cut(s) 43, 115, 2709, 3023
Bsp119I TTCGAA 3 cut(s) 323, 1061, 1434
Bsp1286I GDGCHC 9 cut(s) 450, 1023, 1826, 2129, 2881, 2903, 3012, 3108, 3152
Bsp13I TCCGGA 1 cut(s) 146
Bsp1720I GCTNAGC 2 cut(s) 2010, 2658
BspACI CCGC 7 cut(s) 971, 1126, 2218, 2686, 2747, 2909, 2971
BspANI GGCC 8 cut(s) 58, 86, 392, 589, 594, 921, 1156, 1742
BspEI TCCGGA 1 cut(s) 146
BspFNI CGCG 1 cut(s) 2909
BspHI TCATGA 1 cut(s) 1939
BspMAI CTGCAG 1 cut(s) 2227
BspMI ACCTGC 1 cut(s) 3103
BspPI GGATC 6 cut(s) 599, 636, 2165, 2228, 2775, 2788
BspQI GCTCTTC 1 cut(s) 438
BspT104I TTCGAA 3 cut(s) 323, 1061, 1434
BspT107I GGYRCC 1 cut(s) 693
BspTI CTTAAG 1 cut(s) 3137
BsrBI CCGCTC 2 cut(s) 1126, 2220
BsrDI GCAATG 2 cut(s) 471, 1278
BsrFI RCCGGY 3 cut(s) 70, 476, 955
BsrI ACTGG 5 cut(s) 1145, 1201, 1819, 2246, 2391
BssAI RCCGGY 3 cut(s) 70, 476, 955
BssECI CCNNGG 8 cut(s) 87, 387, 581, 645, 759, 2031, 2796, 3051
BssSI CACGAG 2 cut(s) 2880, 3003
BssT1I CCWWGG 4 cut(s) 387, 645, 759, 2796
Bst2BI CACGAG 2 cut(s) 2880, 3003
Bst2UI CCWGG 5 cut(s) 66, 1110, 2032, 2778, 3052
Bst4CI ACNGT 6 cut(s) 190, 398, 1625, 1727, 2822, 2942
Bst6I CTCTTC 7 cut(s) 438, 507, 840, 1595, 2363, 2603, 2730
BstAFI CTTAAG 1 cut(s) 3137
BstAPI GCANNNNNTGC 1 cut(s) 884
BstBAI YACGTR 1 cut(s) 237
BstBI TTCGAA 3 cut(s) 323, 1061, 1434
BstC8I GCNNGC 4 cut(s) 835, 2502, 2652, 2700
BstDSI CCRYGG 1 cut(s) 581
BstEII GGTNACC 1 cut(s) 1227
BstFNI CGCG 1 cut(s) 2909
BstHHI GCGC 1 cut(s) 833
BstMAI GTCTC 5 cut(s) 208, 2295, 2504, 2723, 3033
BstMWI GCNNNNNNNGC 9 cut(s) 48, 884, 1524, 2189, 2683, 2885, 2915, 3071, 3080
BstNI CCWGG 5 cut(s) 66, 1110, 2032, 2778, 3052
BstNSI RCATGY 1 cut(s) 2702
BstPI GGTNACC 1 cut(s) 1227
BstSFI CTRYAG 2 cut(s) 21, 2223
BstUI CGCG 1 cut(s) 2909
BstV1I GCAGC 7 cut(s) 2026, 2201, 2237, 2309, 2404, 2641, 2775
BstV2I GAAGAC 4 cut(s) 332, 1167, 1280, 1583
BstX2I RGATCY 3 cut(s) 17, 641, 2780
BstXI CCANNNNNNTGG 2 cut(s) 1152, 2357
BstYI RGATCY 3 cut(s) 17, 641, 2780
Bsu36I CCTNAGG 1 cut(s) 2986
BsuI GTATCC 1 cut(s) 1009
BsuRI GGCC 8 cut(s) 58, 86, 392, 589, 594, 921, 1156, 1742
BtgI CCRYGG 1 cut(s) 581
BtsI GCAGTG 5 cut(s) 636, 1157, 1408, 1534, 2086
BveI ACCTGC 1 cut(s) 3103
Cac8I GCNNGC 4 cut(s) 835, 2502, 2652, 2700
CaiI CAGNNNCTG 1 cut(s) 2381
CciI TCATGA 1 cut(s) 1939
CfoI GCGC 1 cut(s) 833
Cfr10I RCCGGY 3 cut(s) 70, 476, 955
Cfr13I GGNCC 8 cut(s) 56, 62, 68, 144, 499, 592, 2055, 2774
CseI GACGC 2 cut(s) 1892, 2915
Csp6I GTAC 3 cut(s) 480, 667, 1855
CviAII CATG 8 cut(s) 229, 838, 1412, 1940, 1972, 2357, 2429, 2699
CviQI GTAC 3 cut(s) 480, 667, 1855
DriI GACNNNNNGTC 1 cut(s) 1171
EaeI YGGCCR 2 cut(s) 587, 1154
Eam1104I CTCTTC 7 cut(s) 438, 507, 840, 1595, 2363, 2603, 2730
Eam1105I GACNNNNNGTC 1 cut(s) 1171
EarI CTCTTC 7 cut(s) 438, 507, 840, 1595, 2363, 2603, 2730
EciI GGCGGA 3 cut(s) 2701, 2736, 2960
Ecl136II GAGCTC 5 cut(s) 448, 1021, 2901, 3010, 3150
Eco130I CCWWGG 4 cut(s) 387, 645, 759, 2796
Eco24I GRGCYC 7 cut(s) 450, 1023, 1826, 2903, 3012, 3108, 3152
Eco32I GATATC 1 cut(s) 1073
Eco47I GGWCC 6 cut(s) 62, 68, 144, 499, 2055, 2774
Eco53kI GAGCTC 5 cut(s) 448, 1021, 2901, 3010, 3150
Eco57I CTGAAG 2 cut(s) 936, 3248
Eco72I CACGTG 1 cut(s) 237
Eco81I CCTNAGG 1 cut(s) 2986
Eco88I CYCGRG 4 cut(s) 43, 115, 2709, 3023
Eco91I GGTNACC 1 cut(s) 1227
EcoICRI GAGCTC 5 cut(s) 448, 1021, 2901, 3010, 3150
EcoO109I RGGNCCY 2 cut(s) 62, 2055
EcoO65I GGTNACC 1 cut(s) 1227
EcoRI GAATTC 2 cut(s) 331, 739
EcoRII CCWGG 5 cut(s) 64, 1108, 2030, 2776, 3050
EcoRV GATATC 1 cut(s) 1073
EcoT14I CCWWGG 4 cut(s) 387, 645, 759, 2796
EcoT38I GRGCYC 7 cut(s) 450, 1023, 1826, 2903, 3012, 3108, 3152
ErhI CCWWGG 4 cut(s) 387, 645, 759, 2796
Esp3I CGTCTC 1 cut(s) 2723
FaeI CATG 8 cut(s) 232, 841, 1415, 1943, 1975, 2360, 2432, 2702
FalI AAGNNNNNCTT 2 cut(s) 1998, 2030
FaqI GGGAC 8 cut(s) 19, 239, 896, 1127, 1846, 2033, 2041, 2928
FatI CATG 8 cut(s) 228, 837, 1411, 1939, 1971, 2356, 2428, 2698
FauNDI CATATG 1 cut(s) 984
Fnu4HI GCNGC 7 cut(s) 2040, 2190, 2226, 2323, 2418, 2655, 2789
FriOI GRGCYC 7 cut(s) 450, 1023, 1826, 2903, 3012, 3108, 3152
Fsp4HI GCNGC 7 cut(s) 2040, 2190, 2226, 2323, 2418, 2655, 2789
FspBI CTAG 2 cut(s) 1008, 2001
GlaI GCGC 1 cut(s) 832
GluI GCNGC 7 cut(s) 2040, 2190, 2226, 2323, 2418, 2655, 2789
GsaI CCCAGC 2 cut(s) 1102, 3161
GsuI CTGGAG 4 cut(s) 299, 909, 2012, 2232
HaeIII GGCC 8 cut(s) 58, 86, 392, 589, 594, 921, 1156, 1742
HgaI GACGC 2 cut(s) 1892, 2915
HhaI GCGC 1 cut(s) 833
Hin1II CATG 8 cut(s) 232, 841, 1415, 1943, 1975, 2360, 2432, 2702
Hin6I GCGC 1 cut(s) 831
HinP1I GCGC 1 cut(s) 831
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
Hpy166II GTNNAC 6 cut(s) 866, 961, 1087, 1790, 2311, 2338
Hpy8I GTNNAC 6 cut(s) 866, 961, 1087, 1790, 2311, 2338
Hpy99I CGWCG 1 cut(s) 706
HpyCH4III ACNGT 6 cut(s) 190, 398, 1625, 1727, 2822, 2942
HpyCH4IV ACGT 2 cut(s) 8, 236
HpyF10VI GCNNNNNNNGC 9 cut(s) 48, 884, 1524, 2189, 2683, 2885, 2915, 3071, 3080
HpySE526I ACGT 2 cut(s) 8, 236
Hsp92II CATG 8 cut(s) 232, 841, 1415, 1943, 1975, 2360, 2432, 2702
HspAI GCGC 1 cut(s) 831
KflI GGGWCCC 1 cut(s) 2055
Kpn2I TCCGGA 1 cut(s) 146
LguI GCTCTTC 1 cut(s) 438
LmnI GCTCC 9 cut(s) 56, 123, 154, 761, 1193, 1684, 2749, 2951, 3220
Lsp1109I GCAGC 7 cut(s) 2026, 2201, 2237, 2309, 2404, 2641, 2775
LweI GCATC 7 cut(s) 328, 604, 887, 1527, 1626, 2026, 2963
MaeI CTAG 2 cut(s) 1008, 2001
MaeII ACGT 2 cut(s) 8, 236
MaeIII GTNAC 7 cut(s) 485, 1077, 1227, 1880, 1930, 2444, 2764
MbiI CCGCTC 2 cut(s) 1126, 2220
MfeI CAATTG 1 cut(s) 707
MflI RGATCY 3 cut(s) 17, 641, 2780
MhlI GDGCHC 9 cut(s) 450, 1023, 1826, 2129, 2881, 2903, 3012, 3108, 3152
MlsI TGGCCA 1 cut(s) 1156
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 8 cut(s) 107, 290, 1573, 1945, 2223, 2297, 2995, 3035
MmeI TCCRAC 1 cut(s) 250
Mox20I TGGCCA 1 cut(s) 1156
MroI TCCGGA 1 cut(s) 146
MroXI GAANNNNTTC 3 cut(s) 536, 849, 1713
MscI TGGCCA 1 cut(s) 1156
MslI CAYNNNNRTG 2 cut(s) 239, 2433
Msp20I TGGCCA 1 cut(s) 1156
MspCI CTTAAG 1 cut(s) 3137
MunI CAATTG 1 cut(s) 707
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 5 cut(s) 66, 1110, 2032, 2778, 3052
MvnI CGCG 1 cut(s) 2909
MwoI GCNNNNNNNGC 9 cut(s) 48, 884, 1524, 2189, 2683, 2885, 2915, 3071, 3080
NciI CCSGG 6 cut(s) 55, 60, 88, 128, 503, 591
NdeI CATATG 1 cut(s) 984
NlaIII CATG 8 cut(s) 232, 841, 1415, 1943, 1975, 2360, 2432, 2702
NmeAIII GCCGAG 1 cut(s) 947
NmuCI GTSAC 3 cut(s) 485, 1227, 1880
NspI RCATGY 1 cut(s) 2702
NspV TTCGAA 3 cut(s) 323, 1061, 1434
PaeI GCATGC 1 cut(s) 2702
PagI TCATGA 1 cut(s) 1939
PaqCI CACCTGC 1 cut(s) 3103
PciSI GCTCTTC 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PctI GAATGC 1 cut(s) 889
PdmI GAANNNNTTC 3 cut(s) 536, 849, 1713
PfeI GAWTC 7 cut(s) 1436, 1916, 1976, 2378, 2438, 2600, 3251
PflMI CCANNNNNTGG 1 cut(s) 3098
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 7 cut(s) 2041, 2191, 2227, 2324, 2419, 2656, 2790
PleI GAGTC 8 cut(s) 107, 289, 1573, 1944, 2222, 2297, 2995, 3034
PmaCI CACGTG 1 cut(s) 237
PmlI CACGTG 1 cut(s) 237
PpsI GAGTC 8 cut(s) 107, 289, 1573, 1944, 2222, 2297, 2995, 3034
Ppu21I YACGTR 1 cut(s) 237
PpuMI RGGWCCY 2 cut(s) 62, 2055
Psp124BI GAGCTC 5 cut(s) 450, 1023, 2903, 3012, 3152
Psp5II RGGWCCY 2 cut(s) 62, 2055
Psp6I CCWGG 5 cut(s) 64, 1108, 2030, 2776, 3050
PspCI CACGTG 1 cut(s) 237
PspEI GGTNACC 1 cut(s) 1227
PspFI CCCAGC 2 cut(s) 1098, 3157
PspGI CCWGG 5 cut(s) 64, 1108, 2030, 2776, 3050
PspPI GGNCC 8 cut(s) 56, 62, 68, 144, 499, 592, 2055, 2774
PspPPI RGGWCCY 2 cut(s) 62, 2055
PstI CTGCAG 1 cut(s) 2227
PstNI CAGNNNCTG 1 cut(s) 2381
PsuI RGATCY 3 cut(s) 17, 641, 2780
RsaI GTAC 3 cut(s) 481, 668, 1856
RsaNI GTAC 3 cut(s) 480, 667, 1855
RseI CAYNNNNRTG 2 cut(s) 239, 2433
SacI GAGCTC 5 cut(s) 450, 1023, 2903, 3012, 3152
SapI GCTCTTC 1 cut(s) 438
SatI GCNGC 7 cut(s) 2040, 2190, 2226, 2323, 2418, 2655, 2789
Sau96I GGNCC 8 cut(s) 56, 62, 68, 144, 499, 592, 2055, 2774
ScaI AGTACT 1 cut(s) 1856
SchI GAGTC 8 cut(s) 107, 290, 1573, 1945, 2223, 2297, 2995, 3035
SduI GDGCHC 9 cut(s) 450, 1023, 1826, 2129, 2881, 2903, 3012, 3108, 3152
SfaNI GCATC 7 cut(s) 328, 604, 887, 1527, 1626, 2026, 2963
SfcI CTRYAG 2 cut(s) 21, 2223
SfuI TTCGAA 3 cut(s) 323, 1061, 1434
SinI GGWCC 6 cut(s) 62, 68, 144, 499, 2055, 2774
SmiMI CAYNNNNRTG 2 cut(s) 239, 2433
SmlI CTYRAG 3 cut(s) 1016, 1588, 3137
SmoI CTYRAG 3 cut(s) 1016, 1588, 3137
SpeI ACTAGT 1 cut(s) 1007
SphI GCATGC 1 cut(s) 2702
SsiI CCGC 7 cut(s) 971, 1126, 2218, 2686, 2747, 2909, 2971
SspMI CTAG 2 cut(s) 1008, 2001
SstI GAGCTC 5 cut(s) 450, 1023, 2903, 3012, 3152
StyI CCWWGG 4 cut(s) 387, 645, 759, 2796
TaaI ACNGT 6 cut(s) 190, 398, 1625, 1727, 2822, 2942
TaiI ACGT 2 cut(s) 11, 239
TatI WGTACW 1 cut(s) 1854
TfiI GAWTC 7 cut(s) 1436, 1916, 1976, 2378, 2438, 2600, 3251
TseFI GTSAC 3 cut(s) 485, 1227, 1880
TseI GCWGC 7 cut(s) 2039, 2189, 2225, 2322, 2417, 2654, 2788
Tsp45I GTSAC 3 cut(s) 485, 1227, 1880
TspGWI ACGGA 4 cut(s) 690, 1399, 1671, 2747
Van91I CCANNNNNTGG 1 cut(s) 3098
Vha464I CTTAAG 1 cut(s) 3137
VpaK11BI GGWCC 6 cut(s) 62, 68, 144, 499, 2055, 2774
XapI RAATTY 9 cut(s) 331, 727, 739, 1213, 2422, 2539, 2825, 2965, 3201
XceI RCATGY 1 cut(s) 2702
XcmI CCANNNNNNNNNTGG 2 cut(s) 1106, 1649
XmnI GAANNNNTTC 3 cut(s) 536, 849, 1713
XspI CTAG 2 cut(s) 1008, 2001
ZrmI AGTACT 1 cut(s) 1856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.