PWWP domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27860 AT3G27860 AT5G40340 AT5G40340 |
| fragaria_vesca | FvH4_6g50890 FvH4_6g50890 |
| malus_domestica | MD09G1031100.v1.1 |
| prunus_persica | Prupe.3G286500_v2.0.a1 |
| pyrus_communis | pycom111g02480 pycom17g03040 |
| rosa_chinensis | RchiOBHm_Chr2g0172271 |
| rosa_laevigata | RLG00000006622 RLG00000018603 RLG00000022100 RLG00000024336 RLG00000028434 RLG00000037070 |
| rosa_multiflora | Rmu_sc0005277.1_g000016 Rmu_sc0017785.1_g000001 Rmu_sc0017786.1_g000001 Rmu_ssc0000103.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00328330 Rroxscaffold_5G00367520 |
| rosa_rugosa | Rorug02G0558300 |
| rosa_samantha | Rh2AG320200 Rh2AG320300 Rh2AG475500 Rh2AG535600 Rh2AG535700 Rh2AG633300 Rh2BG646900 Rh2CG519400 Rh2CG613900 Rh2DG573700 Rh2DG573800 Rh2DG661800 Rh4BG393600 Rh4CG408400 Rh5AG278200 Rh5BG282800 Rh6AG204800 Rh6AG204900 |
| rosa_wichuraiana | Rw2G052440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 76, 295 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 188 |
| AgsI | TTSAA | 1 cut(s) | 158 |
| AluBI | AGCT | 2 cut(s) | 141, 223 |
| AluI | AGCT | 2 cut(s) | 141, 223 |
| Alw26I | GTCTC | 1 cut(s) | 254 |
| ApeKI | GCWGC | 2 cut(s) | 29, 141 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 253, 285 |
| AspS9I | GGNCC | 3 cut(s) | 60, 179, 210 |
| AsuHPI | GGTGA | 1 cut(s) | 238 |
| AvaII | GGWCC | 3 cut(s) | 60, 179, 210 |
| BbvI | GCAGC | 2 cut(s) | 41, 128 |
| BccI | CCATC | 1 cut(s) | 200 |
| BcoDI | GTCTC | 1 cut(s) | 254 |
| BfaI | CTAG | 1 cut(s) | 305 |
| BisI | GCNGC | 2 cut(s) | 30, 142 |
| BlsI | GCNGC | 2 cut(s) | 31, 143 |
| Bme18I | GGWCC | 3 cut(s) | 60, 179, 210 |
| BmgT120I | GGNCC | 3 cut(s) | 60, 179, 210 |
| BmiI | GGNNCC | 1 cut(s) | 211 |
| BsaI | GGTCTC | 1 cut(s) | 254 |
| BsaWI | WCCGGW | 2 cut(s) | 181, 212 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 188 |
| Bse1I | ACTGG | 1 cut(s) | 72 |
| BseGI | GGATG | 2 cut(s) | 190, 211 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseNI | ACTGG | 1 cut(s) | 72 |
| BseRI | GAGGAG | 4 cut(s) | 35, 38, 41, 210 |
| BseXI | GCAGC | 2 cut(s) | 41, 128 |
| BsiSI | CCGG | 2 cut(s) | 182, 213 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BsmAI | GTCTC | 1 cut(s) | 254 |
| Bso31I | GGTCTC | 1 cut(s) | 254 |
| Bsp143I | GATC | 1 cut(s) | 299 |
| BspLI | GGNNCC | 1 cut(s) | 211 |
| BspTNI | GGTCTC | 1 cut(s) | 254 |
| BsrI | ACTGG | 1 cut(s) | 72 |
| BssMI | GATC | 1 cut(s) | 299 |
| Bst4CI | ACNGT | 1 cut(s) | 256 |
| BstF5I | GGATG | 2 cut(s) | 190, 211 |
| BstKTI | GATC | 1 cut(s) | 302 |
| BstMAI | GTCTC | 1 cut(s) | 254 |
| BstMBI | GATC | 1 cut(s) | 299 |
| BstV1I | GCAGC | 2 cut(s) | 41, 128 |
| BtsCI | GGATG | 2 cut(s) | 190, 211 |
| Cfr13I | GGNCC | 3 cut(s) | 60, 179, 210 |
| CpoI | CGGWCCG | 1 cut(s) | 179 |
| Csp6I | GTAC | 2 cut(s) | 75, 294 |
| CspI | CGGWCCG | 1 cut(s) | 179 |
| CviJI | RGCY | 3 cut(s) | 141, 223, 308 |
| CviKI_1 | RGCY | 3 cut(s) | 141, 223, 308 |
| CviQI | GTAC | 2 cut(s) | 75, 294 |
| DpnI | GATC | 1 cut(s) | 301 |
| DpnII | GATC | 1 cut(s) | 299 |
| Eco31I | GGTCTC | 1 cut(s) | 254 |
| Eco47I | GGWCC | 3 cut(s) | 60, 179, 210 |
| FaiI | YATR | 2 cut(s) | 84, 162 |
| Fnu4HI | GCNGC | 2 cut(s) | 30, 142 |
| FokI | GGATG | 2 cut(s) | 197, 218 |
| Fsp4HI | GCNGC | 2 cut(s) | 30, 142 |
| FspBI | CTAG | 1 cut(s) | 305 |
| GluI | GCNGC | 2 cut(s) | 30, 142 |
| HapII | CCGG | 2 cut(s) | 182, 213 |
| HpaII | CCGG | 2 cut(s) | 182, 213 |
| HphI | GGTGA | 1 cut(s) | 238 |
| Hpy188I | TCNGA | 2 cut(s) | 138, 179 |
| Hpy188III | TCNNGA | 2 cut(s) | 111, 250 |
| HpyAV | CCTTC | 2 cut(s) | 81, 182 |
| HpyCH4III | ACNGT | 1 cut(s) | 256 |
| HpyCH4IV | ACGT | 1 cut(s) | 292 |
| HpySE526I | ACGT | 1 cut(s) | 292 |
| Kzo9I | GATC | 1 cut(s) | 299 |
| LmnI | GCTCC | 2 cut(s) | 138, 220 |
| LpnPI | CCDG | 6 cut(s) | 39, 85, 91, 195, 209, 226 |
| Lsp1109I | GCAGC | 2 cut(s) | 41, 128 |
| MaeI | CTAG | 1 cut(s) | 305 |
| MaeII | ACGT | 1 cut(s) | 292 |
| MaeIII | GTNAC | 1 cut(s) | 278 |
| MalI | GATC | 1 cut(s) | 301 |
| MboI | GATC | 1 cut(s) | 299 |
| MboII | GAAGA | 1 cut(s) | 112 |
| MfeI | CAATTG | 1 cut(s) | 285 |
| MluCI | AATT | 3 cut(s) | 33, 153, 285 |
| MnlI | CCTC | 9 cut(s) | 53, 56, 59, 62, 73, 90, 188, 195, 222 |
| MspI | CCGG | 2 cut(s) | 182, 213 |
| MunI | CAATTG | 1 cut(s) | 285 |
| NdeII | GATC | 1 cut(s) | 299 |
| NlaIV | GGNNCC | 1 cut(s) | 211 |
| PkrI | GCNGC | 2 cut(s) | 31, 143 |
| PspN4I | GGNNCC | 1 cut(s) | 211 |
| PspPI | GGNCC | 3 cut(s) | 60, 179, 210 |
| RsaI | GTAC | 2 cut(s) | 76, 295 |
| RsaNI | GTAC | 2 cut(s) | 75, 294 |
| Rsr2I | CGGWCCG | 1 cut(s) | 179 |
| RsrII | CGGWCCG | 1 cut(s) | 179 |
| SatI | GCNGC | 2 cut(s) | 30, 142 |
| Sau3AI | GATC | 1 cut(s) | 299 |
| Sau96I | GGNCC | 3 cut(s) | 60, 179, 210 |
| SetI | ASST | 6 cut(s) | 65, 143, 193, 225, 233, 295 |
| SgeI | CNNG | 9 cut(s) | 38, 84, 90, 123, 182, 194, 225, 236, 262 |
| SinI | GGWCC | 3 cut(s) | 60, 179, 210 |
| Sse9I | AATT | 3 cut(s) | 33, 153, 285 |
| SspMI | CTAG | 1 cut(s) | 305 |
| TaaI | ACNGT | 1 cut(s) | 256 |
| TaiI | ACGT | 1 cut(s) | 295 |
| TaqI | TCGA | 1 cut(s) | 298 |
| TasI | AATT | 3 cut(s) | 33, 153, 285 |
| TseI | GCWGC | 2 cut(s) | 29, 141 |
| TspDTI | ATGAA | 2 cut(s) | 134, 201 |
| TspGWI | ACGGA | 1 cut(s) | 138 |
| VpaK11BI | GGWCC | 3 cut(s) | 60, 179, 210 |
| XspI | CTAG | 1 cut(s) | 305 |