Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000103.1

Orthogroup ID

OG0002210

Physical Location & Seq

Genomic Coordinates Forward (+)

17356 .. 20604

Gene Structure 3249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000103.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3249 bp

atggggacgttggggagatctacagccgtagctgatggttgctcgggtggctccgggtcgggttctggaccggcgaggtttgaggccggggaggagaggaggaggattgacgactcgggtgggggccgggtcgggtcgggagggtccggaggggagctggtgaggtcgtttgttgagctggttaagacggtggaggctaaagtctcggttgggatgagttttggggacatggatacgtgtatgtcgaggttgagagggagtgagagcgttggagagctggagtctggtttgggtgaggagaggagagtagtgagcattggttcgaagacgaattcggatgcgaatgtagggggggatgaggacaatgggaattgttgtgatgaaaccaaggccaacggtgttggggttgaggagaatggcaagtgtttggatgaaattgtggaagagctagatgggggaattgaggttcccattgccggtacgagtgaaaatggtgaagacggggtgggagaagagttgagtgatggagtgaatgagttctgcatcggagattttgtgtggggtaagattaagaaccacccgtggtggccgggccagatttgtgatccttcggatgcttctgagtttgcagtgaagttgagatccaaggacaaacttcttgtagcgtactttggggatgacactttcgcgtggtgccatccgtcgcaattgaaaccctttgaggaaaatttcgtggagaattctaagctgagtagctccaaggtttttgttattgctgtgcagcaggctgtggatgagataggtaggcttgtaaagttgaagatgagttgcgcttgcatgggggaagagtttctaagtggtcgtaaacagcctttagcatcgaatgctggagttaaggaaggagttgttgtccctgaaggccgagttgggaagtttttgggtcatctatctcagtcggttgaccttcttgcggaattgaaacatatggcacaagctgtatccttgactagtgttcttgagctcaatgtattaaagagtttgctgtctgccttttattgttcgaaagggggatatcagttacctgtttacattgaaccccagctaattcctggtcttgaagatgagcggaagatggtggaagtcccagtgcagtggccatctgatgacaggtcgtcttctcccataggctccaatactggaaacactgaacaaaatttgttgcaaaggtcaccaccaagtatagaaaatagacagccccataaaaggaaggagaagaccattgctgatcttcttggagaagccaatcgtgttgaggtaaaaagtatggatggggttgtagctaaagaaagtgcaatctcagagaaacgagggctatcatccagacggaagaagcagaaaagcagtgatattcatggtgagggtagattgactttcgaatcaggaagggaaagagccagactctcaaaatcgcccaggagaaaggaagaagatgaaggtattggcatcgagagtagtgatggtttggctaaagagagtgctggtggaaatgaagaaactaagaagactcctctctcaaggaaaaggaagagggatgaagatagcatcgacagtaaagatggtgatacccaagaaaaaagtggtgaaaaggatgaaactaagaaggctccgttgtcaaggagaaggaagaagaatgaagatattcacatcaacagtaatgatggtgaggccaaaggaaaagctggtgcaagagtgggggagttgctcaatgttggtttacaaacagatatgaaagaccaaattggtaagagccctttgttgagggaaagaaaaaaaagcaagtacttgtccccacccttcacaataagtgacgcagggaaaagaaaacgaaacttggaaacagaatctcgaaatgctgtaacgagtcatgatttggggaaagaggggaaagagcaagacatggaatcagtattatctctggaggtttctagtaaagctcagcttggggacaggattaccagggatgctgccaacattaaggggtcccctcagattttgaatagttgcagtgaggcattacaagagaaactctcaatagaaggtgggaataagagcactgatgttaaaacaccagcagaaggtgagaagaagcgtgttgatccaataaaagctaatgcagccactaatgaagtgctgtctggagtccgctctgcagctcttgatccattatatccagtcaaaaggaaatcctcctttgagattgttgttgattttgtgtccatatttagagactcagtttaccacaatggctgctaccacaaggtttacaagaagcaccaacctcatggaaagaggaagagatcagattctgaactggggtcattggtgaaagacaatcgaactgctgcaaatttgcatgaagatgaacctggtaacagggttatgaagaagaaacaagatatgaagtctgataagcctacaaaaaagcaagctggtgagacacgaagttcaaagagaaggaagttaaattctgtaattaagtcgttgggaaaagacaatgagaaagcagaaaatcagcctgtcagtgaatctggggagaggaacatcaacactaatcaagataagcctaagaaaaagcaagctgctgagccaccaatttcaaagctggtcaggcggagatcaaagcatgctgacactcgggatttgaagattaaggagacggaagaggagtctccgcctacattcctttttgtaacatttggacctggatcctcgctgcctaccaaggatgatcttctcagattatacagtaaatttggggaactaaatgaaactgaaactgagatgttctacaccaatttctgtgctcgtgttgcgtttgtaatgagctctgacgcggaagaagccttcaatcattctctaattgacagtccctttggagcatccaatgtaaatttccgcctccaaaatccctcaggtgcttccaagactcgtgagctcagtgcaatacccgagtctcctccagctaagaagaagtccaggggcaagactgcaagtgaggcattagtagcttcacaaccacctgctggtgagccctcgcaagttgatttcattaggcatagacttaagatgatgagctcaatgctgggaaactcagatcgcaaagtgtcgcctgttgcaacatcgaaaattcagaatgagataaaggagctactgaaggtcgtaagcacaatgggtgaatcctcatcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWWP

Protein Analysis

1082

Amino Acids

118.02

Weight (kDa)

8.25

Isoelectric Point (pI)

54.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27860 AT3G27860 AT5G40340 AT5G40340
fragaria_vesca	FvH4_6g50890 FvH4_6g50890
malus_domestica	MD09G1031100.v1.1
prunus_persica	Prupe.3G286500_v2.0.a1
pyrus_communis	pycom111g02480 pycom17g03040
rosa_chinensis	RchiOBHm_Chr2g0172271
rosa_laevigata	RLG00000006622 RLG00000018603 RLG00000022100 RLG00000024336 RLG00000028434 RLG00000037070
rosa_multiflora	Rmu_sc0005277.1_g000016 Rmu_sc0017785.1_g000001 Rmu_sc0017786.1_g000001 Rmu_ssc0000103.1_g000005
rosa_roxburghii	Rroxscaffold_4G00328330 Rroxscaffold_5G00367520
rosa_rugosa	Rorug02G0558300
rosa_samantha	Rh2AG320200 Rh2AG320300 Rh2AG475500 Rh2AG535600 Rh2AG535700 Rh2AG633300 Rh2BG646900 Rh2CG519400 Rh2CG613900 Rh2DG573700 Rh2DG573800 Rh2DG661800 Rh4BG393600 Rh4CG408400 Rh5AG278200 Rh5BG282800 Rh6AG204800 Rh6AG204900
rosa_wichuraiana	Rw2G052440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3088
Acc36I	ACCTGC	1 cut(s)	3088
AccB1I	GGYRCC	1 cut(s)	693
AccB7I	CCANNNNNTGG	1 cut(s)	3083
AccBSI	CCGCTC	2 cut(s)	1126, 2205
AccII	CGCG	2 cut(s)	689, 2894
AccIII	TCCGGA	1 cut(s)	146
AciI	CCGC	7 cut(s)	971, 1126, 2203, 2671, 2732, 2894, 2956
AclWI	GGATC	6 cut(s)	599, 636, 2150, 2213, 2760, 2773
AcoI	YGGCCR	2 cut(s)	587, 1154
AcsI	RAATTY	9 cut(s)	331, 727, 739, 1213, 2407, 2524, 2810, 2950, 3186
AcuI	CTGAAG	2 cut(s)	936, 3233
AfaI	GTAC	3 cut(s)	481, 668, 1841
AfiI	CCNNNNNNNGG	5 cut(s)	476, 970, 1263, 2135, 3083
AflII	CTTAAG	1 cut(s)	3122
AflIII	ACRYGT	1 cut(s)	236
AhdI	GACNNNNNGTC	1 cut(s)	1171
AhlI	ACTAGT	1 cut(s)	1007
AjnI	CCWGG	6 cut(s)	1108, 1472, 2015, 2425, 2761, 3035
AjuI	GAANNNNNNNTTGG	4 cut(s)	909, 941, 2936, 2968
AloI	GAACNNNNNNTCC	2 cut(s)	450, 482
Alw21I	GWGCWC	6 cut(s)	1023, 2114, 2866, 2888, 2997, 3137
Alw26I	GTCTC	6 cut(s)	208, 2280, 2489, 2708, 2733, 3018
AlwI	GGATC	6 cut(s)	599, 636, 2150, 2213, 2760, 2773
AlwNI	CAGNNNCTG	1 cut(s)	2366
Ama87I	CYCGRG	4 cut(s)	43, 115, 2694, 3008
Aor13HI	TCCGGA	1 cut(s)	146
AoxI	GGCC	8 cut(s)	84, 124, 390, 587, 592, 919, 1154, 1725
ApeKI	GCWGC	8 cut(s)	781, 2024, 2174, 2210, 2307, 2402, 2639, 2773
ApoI	RAATTY	9 cut(s)	331, 727, 739, 1213, 2407, 2524, 2810, 2950, 3186
ArsI	GACNNNNNNTTYG	2 cut(s)	2915, 2947
Asp700I	GAANNNNTTC	3 cut(s)	536, 849, 1698
AspLEI	GCGC	1 cut(s)	833
AspS9I	GGNCC	6 cut(s)	68, 124, 144, 592, 2040, 2759
AsuC2I	CCSGG	4 cut(s)	55, 88, 128, 591
AsuII	TTCGAA	3 cut(s)	323, 1061, 1434
AvaI	CYCGRG	4 cut(s)	43, 115, 2694, 3008
AvaII	GGWCC	4 cut(s)	68, 144, 2040, 2759
AxyI	CCTNAGG	1 cut(s)	2971
BalI	TGGCCA	1 cut(s)	1156
BamHI	GGATCC	1 cut(s)	2765
BanI	GGYRCC	1 cut(s)	693
BanII	GRGCYC	6 cut(s)	1023, 1811, 2888, 2997, 3093, 3137
BauI	CACGAG	2 cut(s)	2865, 2988
BbsI	GAAGAC	5 cut(s)	332, 504, 1167, 1280, 1568
Bbv12I	GWGCWC	6 cut(s)	1023, 2114, 2866, 2888, 2997, 3137
BbvI	GCAGC	8 cut(s)	793, 2011, 2186, 2222, 2294, 2389, 2626, 2760
BceAI	ACGGC	1 cut(s)	11
BciT130I	CCWGG	6 cut(s)	1110, 1474, 2017, 2427, 2763, 3037
BciVI	GTATCC	2 cut(s)	226, 1009
BcnI	CCSGG	4 cut(s)	55, 88, 128, 591
BcoDI	GTCTC	6 cut(s)	208, 2280, 2489, 2708, 2733, 3018
BcuI	ACTAGT	1 cut(s)	1007
BfaI	CTAG	3 cut(s)	449, 1008, 1986
BfmI	CTRYAG	2 cut(s)	21, 2208
BfrI	CTTAAG	1 cut(s)	3122
BfuAI	ACCTGC	1 cut(s)	3088
BfuI	GTATCC	2 cut(s)	226, 1009
BglII	AGATCT	1 cut(s)	17
BisI	GCNGC	8 cut(s)	782, 2025, 2175, 2211, 2308, 2403, 2640, 2774
BlpI	GCTNAGC	2 cut(s)	1995, 2643
BlsI	GCNGC	8 cut(s)	783, 2026, 2176, 2212, 2309, 2404, 2641, 2775
BmcAI	AGTACT	1 cut(s)	1841
Bme18I	GGWCC	4 cut(s)	68, 144, 2040, 2759
BmeRI	GACNNNNNGTC	1 cut(s)	1171
BmeT110I	CYCGRG	4 cut(s)	43, 115, 2694, 3008
BmgT120I	GGNCC	6 cut(s)	68, 124, 144, 592, 2040, 2759
BmrI	ACTGGG	2 cut(s)	1139, 2381
BmsI	GCATC	8 cut(s)	328, 552, 604, 887, 1512, 1611, 2011, 2948
BmuI	ACTGGG	2 cut(s)	1139, 2381
BpiI	GAAGAC	5 cut(s)	332, 504, 1167, 1280, 1568
BplI	GAGNNNNNCTC	4 cut(s)	1443, 1475, 2072, 2104
BpmI	CTGGAG	5 cut(s)	299, 909, 1997, 2217, 3003
Bpu1102I	GCTNAGC	2 cut(s)	1995, 2643
Bpu14I	TTCGAA	3 cut(s)	323, 1061, 1434
BpuEI	CTTGAG	2 cut(s)	1037, 1558
BpuMI	CCSGG	4 cut(s)	55, 88, 128, 591
BsaAI	YACGTR	1 cut(s)	237
BsaJI	CCNNGG	9 cut(s)	87, 387, 581, 645, 759, 1472, 2016, 2781, 3036
BsaWI	WCCGGW	1 cut(s)	146
BsaXI	ACNNNNNCTCC	4 cut(s)	540, 570, 894, 924
Bsc4I	CCNNNNNNNGG	5 cut(s)	476, 970, 1263, 2135, 3083
Bse118I	RCCGGY	2 cut(s)	70, 476
Bse1I	ACTGG	4 cut(s)	1145, 1201, 2231, 2376
Bse21I	CCTNAGG	1 cut(s)	2971
Bse3DI	GCAATG	2 cut(s)	471, 1278
BseAI	TCCGGA	1 cut(s)	146
BseBI	CCWGG	6 cut(s)	1110, 1474, 2017, 2427, 2763, 3037
BseDI	CCNNGG	9 cut(s)	87, 387, 581, 645, 759, 1472, 2016, 2781, 3036
BseLI	CCNNNNNNNGG	5 cut(s)	476, 970, 1263, 2135, 3083
BseMI	GCAATG	2 cut(s)	471, 1278
BseNI	ACTGG	4 cut(s)	1145, 1201, 2231, 2376
BseRI	GAGGAG	9 cut(s)	107, 112, 115, 311, 316, 425, 1557, 2738, 3006
BseXI	GCAGC	8 cut(s)	793, 2011, 2186, 2222, 2294, 2389, 2626, 2760
BseYI	CCCAGC	2 cut(s)	1098, 3142
BsgI	GTGCAG	2 cut(s)	800, 1169
Bsh1236I	CGCG	2 cut(s)	689, 2894
BshFI	GGCC	8 cut(s)	86, 126, 392, 589, 594, 921, 1156, 1727
BshNI	GGYRCC	1 cut(s)	693
BsiHKAI	GWGCWC	6 cut(s)	1023, 2114, 2866, 2888, 2997, 3137
BsiHKCI	CYCGRG	4 cut(s)	43, 115, 2694, 3008
BsiSI	CCGG	7 cut(s)	54, 71, 87, 127, 147, 477, 590
BslFI	GGGAC	8 cut(s)	19, 239, 896, 1127, 1831, 2018, 2026, 2913
BslI	CCNNNNNNNGG	5 cut(s)	476, 970, 1263, 2135, 3083
BsmAI	GTCTC	6 cut(s)	208, 2280, 2489, 2708, 2733, 3018
BsmBI	CGTCTC	1 cut(s)	2708
BsmFI	GGGAC	8 cut(s)	19, 239, 896, 1127, 1831, 2018, 2026, 2913
BsmI	GAATGC	1 cut(s)	889
BsnI	GGCC	8 cut(s)	86, 126, 392, 589, 594, 921, 1156, 1727
BsoBI	CYCGRG	4 cut(s)	43, 115, 2694, 3008
Bsp119I	TTCGAA	3 cut(s)	323, 1061, 1434
Bsp1286I	GDGCHC	8 cut(s)	1023, 1811, 2114, 2866, 2888, 2997, 3093, 3137
Bsp13I	TCCGGA	1 cut(s)	146
Bsp1720I	GCTNAGC	2 cut(s)	1995, 2643
BspACI	CCGC	7 cut(s)	971, 1126, 2203, 2671, 2732, 2894, 2956
BspANI	GGCC	8 cut(s)	86, 126, 392, 589, 594, 921, 1156, 1727
BspEI	TCCGGA	1 cut(s)	146
BspFNI	CGCG	2 cut(s)	689, 2894
BspHI	TCATGA	1 cut(s)	1924
BspMAI	CTGCAG	1 cut(s)	2212
BspMI	ACCTGC	1 cut(s)	3088
BspPI	GGATC	6 cut(s)	599, 636, 2150, 2213, 2760, 2773
BspQI	GCTCTTC	1 cut(s)	438
BspT104I	TTCGAA	3 cut(s)	323, 1061, 1434
BspT107I	GGYRCC	1 cut(s)	693
BspTI	CTTAAG	1 cut(s)	3122
BsrBI	CCGCTC	2 cut(s)	1126, 2205
BsrDI	GCAATG	2 cut(s)	471, 1278
BsrFI	RCCGGY	2 cut(s)	70, 476
BsrI	ACTGG	4 cut(s)	1145, 1201, 2231, 2376
BssAI	RCCGGY	2 cut(s)	70, 476
BssECI	CCNNGG	9 cut(s)	87, 387, 581, 645, 759, 1472, 2016, 2781, 3036
BssSI	CACGAG	2 cut(s)	2865, 2988
BssT1I	CCWWGG	4 cut(s)	387, 645, 759, 2781
Bst2BI	CACGAG	2 cut(s)	2865, 2988
Bst2UI	CCWGG	6 cut(s)	1110, 1474, 2017, 2427, 2763, 3037
Bst4CI	ACNGT	6 cut(s)	190, 398, 1610, 1712, 2807, 2927
Bst6I	CTCTTC	6 cut(s)	438, 507, 840, 1580, 2348, 2715
BstAFI	CTTAAG	1 cut(s)	3122
BstAPI	GCANNNNNTGC	1 cut(s)	884
BstBAI	YACGTR	1 cut(s)	237
BstBI	TTCGAA	3 cut(s)	323, 1061, 1434
BstC8I	GCNNGC	5 cut(s)	786, 835, 2487, 2637, 2685
BstDSI	CCRYGG	1 cut(s)	581
BstEII	GGTNACC	1 cut(s)	1227
BstFNI	CGCG	2 cut(s)	689, 2894
BstHHI	GCGC	1 cut(s)	833
BstMAI	GTCTC	6 cut(s)	208, 2280, 2489, 2708, 2733, 3018
BstMWI	GCNNNNNNNGC	8 cut(s)	48, 884, 2174, 2668, 2870, 2900, 3056, 3065
BstNI	CCWGG	6 cut(s)	1110, 1474, 2017, 2427, 2763, 3037
BstNSI	RCATGY	1 cut(s)	2687
BstPI	GGTNACC	1 cut(s)	1227
BstSFI	CTRYAG	2 cut(s)	21, 2208
BstUI	CGCG	2 cut(s)	689, 2894
BstV1I	GCAGC	8 cut(s)	793, 2011, 2186, 2222, 2294, 2389, 2626, 2760
BstV2I	GAAGAC	5 cut(s)	332, 504, 1167, 1280, 1568
BstX2I	RGATCY	3 cut(s)	17, 641, 2765
BstXI	CCANNNNNNTGG	2 cut(s)	1152, 2342
BstYI	RGATCY	3 cut(s)	17, 641, 2765
Bsu36I	CCTNAGG	1 cut(s)	2971
BsuI	GTATCC	2 cut(s)	226, 1009
BsuRI	GGCC	8 cut(s)	86, 126, 392, 589, 594, 921, 1156, 1727
BtgI	CCRYGG	1 cut(s)	581
BtsI	GCAGTG	4 cut(s)	636, 1157, 1408, 2071
BtsIMutI	CAGTG	9 cut(s)	636, 1152, 1157, 1203, 1408, 2071, 2112, 2587, 3004
BveI	ACCTGC	1 cut(s)	3088
Cac8I	GCNNGC	5 cut(s)	786, 835, 2487, 2637, 2685
CaiI	CAGNNNCTG	1 cut(s)	2366
CciI	TCATGA	1 cut(s)	1924
CfoI	GCGC	1 cut(s)	833
Cfr10I	RCCGGY	2 cut(s)	70, 476
Cfr13I	GGNCC	6 cut(s)	68, 124, 144, 592, 2040, 2759
CseI	GACGC	2 cut(s)	1877, 2900
CsiI	ACCWGGT	1 cut(s)	2425
Csp6I	GTAC	3 cut(s)	480, 667, 1840
CviAII	CATG	8 cut(s)	229, 838, 1412, 1925, 1957, 2342, 2414, 2684
CviQI	GTAC	3 cut(s)	480, 667, 1840
DriI	GACNNNNNGTC	1 cut(s)	1171
EaeI	YGGCCR	2 cut(s)	587, 1154
Eam1104I	CTCTTC	6 cut(s)	438, 507, 840, 1580, 2348, 2715
Eam1105I	GACNNNNNGTC	1 cut(s)	1171
EarI	CTCTTC	6 cut(s)	438, 507, 840, 1580, 2348, 2715
EciI	GGCGGA	3 cut(s)	2686, 2721, 2945
Ecl136II	GAGCTC	4 cut(s)	1021, 2886, 2995, 3135
Eco130I	CCWWGG	4 cut(s)	387, 645, 759, 2781
Eco24I	GRGCYC	6 cut(s)	1023, 1811, 2888, 2997, 3093, 3137
Eco32I	GATATC	1 cut(s)	1073
Eco47I	GGWCC	4 cut(s)	68, 144, 2040, 2759
Eco53kI	GAGCTC	4 cut(s)	1021, 2886, 2995, 3135
Eco57I	CTGAAG	2 cut(s)	936, 3233
Eco81I	CCTNAGG	1 cut(s)	2971
Eco88I	CYCGRG	4 cut(s)	43, 115, 2694, 3008
Eco91I	GGTNACC	1 cut(s)	1227
EcoICRI	GAGCTC	4 cut(s)	1021, 2886, 2995, 3135
EcoO109I	RGGNCCY	1 cut(s)	2040
EcoO65I	GGTNACC	1 cut(s)	1227
EcoRI	GAATTC	2 cut(s)	331, 739
EcoRII	CCWGG	6 cut(s)	1108, 1472, 2015, 2425, 2761, 3035
EcoRV	GATATC	1 cut(s)	1073
EcoT14I	CCWWGG	4 cut(s)	387, 645, 759, 2781
EcoT38I	GRGCYC	6 cut(s)	1023, 1811, 2888, 2997, 3093, 3137
ErhI	CCWWGG	4 cut(s)	387, 645, 759, 2781
Esp3I	CGTCTC	1 cut(s)	2708
FaeI	CATG	8 cut(s)	232, 841, 1415, 1928, 1960, 2345, 2417, 2687
FalI	AAGNNNNNCTT	2 cut(s)	1983, 2015
FaqI	GGGAC	8 cut(s)	19, 239, 896, 1127, 1831, 2018, 2026, 2913
FatI	CATG	8 cut(s)	228, 837, 1411, 1924, 1956, 2341, 2413, 2683
FauNDI	CATATG	1 cut(s)	984
Fnu4HI	GCNGC	8 cut(s)	782, 2025, 2175, 2211, 2308, 2403, 2640, 2774
FriOI	GRGCYC	6 cut(s)	1023, 1811, 2888, 2997, 3093, 3137
Fsp4HI	GCNGC	8 cut(s)	782, 2025, 2175, 2211, 2308, 2403, 2640, 2774
FspBI	CTAG	3 cut(s)	449, 1008, 1986
GlaI	GCGC	1 cut(s)	832
GluI	GCNGC	8 cut(s)	782, 2025, 2175, 2211, 2308, 2403, 2640, 2774
GsaI	CCCAGC	2 cut(s)	1102, 3146
GsuI	CTGGAG	5 cut(s)	299, 909, 1997, 2217, 3003
HaeIII	GGCC	8 cut(s)	86, 126, 392, 589, 594, 921, 1156, 1727
HapII	CCGG	7 cut(s)	54, 71, 87, 127, 147, 477, 590
HgaI	GACGC	2 cut(s)	1877, 2900
HhaI	GCGC	1 cut(s)	833
Hin1II	CATG	8 cut(s)	232, 841, 1415, 1928, 1960, 2345, 2417, 2687
Hin6I	GCGC	1 cut(s)	831
HinP1I	GCGC	1 cut(s)	831
HincII	GTYRAC	1 cut(s)	961
HindII	GTYRAC	1 cut(s)	961
HpaII	CCGG	7 cut(s)	54, 71, 87, 127, 147, 477, 590
Hpy166II	GTNNAC	6 cut(s)	866, 961, 1087, 1775, 2296, 2323
Hpy8I	GTNNAC	6 cut(s)	866, 961, 1087, 1775, 2296, 2323
Hpy99I	CGWCG	1 cut(s)	706
HpyCH4III	ACNGT	6 cut(s)	190, 398, 1610, 1712, 2807, 2927
HpyCH4IV	ACGT	2 cut(s)	8, 236
HpyF10VI	GCNNNNNNNGC	8 cut(s)	48, 884, 2174, 2668, 2870, 2900, 3056, 3065
HpySE526I	ACGT	2 cut(s)	8, 236
Hsp92II	CATG	8 cut(s)	232, 841, 1415, 1928, 1960, 2345, 2417, 2687
HspAI	GCGC	1 cut(s)	831
KflI	GGGWCCC	1 cut(s)	2040
Kpn2I	TCCGGA	1 cut(s)	146
LguI	GCTCTTC	1 cut(s)	438
LmnI	GCTCC	7 cut(s)	56, 154, 761, 1193, 1669, 2936, 3205
Lsp1109I	GCAGC	8 cut(s)	793, 2011, 2186, 2222, 2294, 2389, 2626, 2760
LweI	GCATC	8 cut(s)	328, 552, 604, 887, 1512, 1611, 2011, 2948
MabI	ACCWGGT	1 cut(s)	2425
MaeI	CTAG	3 cut(s)	449, 1008, 1986
MaeII	ACGT	2 cut(s)	8, 236
MaeIII	GTNAC	6 cut(s)	1077, 1227, 1865, 1915, 2429, 2749
MbiI	CCGCTC	2 cut(s)	1126, 2205
MfeI	CAATTG	1 cut(s)	707
MflI	RGATCY	3 cut(s)	17, 641, 2765
MhlI	GDGCHC	8 cut(s)	1023, 1811, 2114, 2866, 2888, 2997, 3093, 3137
MlsI	TGGCCA	1 cut(s)	1156
MluNI	TGGCCA	1 cut(s)	1156
MmeI	TCCRAC	1 cut(s)	250
Mox20I	TGGCCA	1 cut(s)	1156
MroI	TCCGGA	1 cut(s)	146
MroXI	GAANNNNTTC	3 cut(s)	536, 849, 1698
MscI	TGGCCA	1 cut(s)	1156
MslI	CAYNNNNRTG	1 cut(s)	2418
Msp20I	TGGCCA	1 cut(s)	1156
MspCI	CTTAAG	1 cut(s)	3122
MspI	CCGG	7 cut(s)	54, 71, 87, 127, 147, 477, 590
MunI	CAATTG	1 cut(s)	707
Mva1269I	GAATGC	1 cut(s)	889
MvaI	CCWGG	6 cut(s)	1110, 1474, 2017, 2427, 2763, 3037
MvnI	CGCG	2 cut(s)	689, 2894
MwoI	GCNNNNNNNGC	8 cut(s)	48, 884, 2174, 2668, 2870, 2900, 3056, 3065
NciI	CCSGG	4 cut(s)	55, 88, 128, 591
NdeI	CATATG	1 cut(s)	984
NlaIII	CATG	8 cut(s)	232, 841, 1415, 1928, 1960, 2345, 2417, 2687
NmeAIII	GCCGAG	1 cut(s)	947
NmuCI	GTSAC	2 cut(s)	1227, 1865
NspI	RCATGY	1 cut(s)	2687
NspV	TTCGAA	3 cut(s)	323, 1061, 1434
PaeI	GCATGC	1 cut(s)	2687
PagI	TCATGA	1 cut(s)	1924
PaqCI	CACCTGC	1 cut(s)	3088
PciSI	GCTCTTC	1 cut(s)	438
PcsI	WCGNNNNNNNCGW	1 cut(s)	242
PctI	GAATGC	1 cut(s)	889
PdmI	GAANNNNTTC	3 cut(s)	536, 849, 1698
PfeI	GAWTC	6 cut(s)	1436, 1901, 1961, 2363, 2585, 3236
PflMI	CCANNNNNTGG	1 cut(s)	3083
PkrI	GCNGC	8 cut(s)	783, 2026, 2176, 2212, 2309, 2404, 2641, 2775
Ppu21I	YACGTR	1 cut(s)	237
PpuMI	RGGWCCY	1 cut(s)	2040
Psp124BI	GAGCTC	4 cut(s)	1023, 2888, 2997, 3137
Psp5II	RGGWCCY	1 cut(s)	2040
Psp6I	CCWGG	6 cut(s)	1108, 1472, 2015, 2425, 2761, 3035
PspEI	GGTNACC	1 cut(s)	1227
PspFI	CCCAGC	2 cut(s)	1098, 3142
PspGI	CCWGG	6 cut(s)	1108, 1472, 2015, 2425, 2761, 3035
PspPI	GGNCC	6 cut(s)	68, 124, 144, 592, 2040, 2759
PspPPI	RGGWCCY	1 cut(s)	2040
PstI	CTGCAG	1 cut(s)	2212
PstNI	CAGNNNCTG	1 cut(s)	2366
PsuI	RGATCY	3 cut(s)	17, 641, 2765
RsaI	GTAC	3 cut(s)	481, 668, 1841
RsaNI	GTAC	3 cut(s)	480, 667, 1840
RseI	CAYNNNNRTG	1 cut(s)	2418
SacI	GAGCTC	4 cut(s)	1023, 2888, 2997, 3137
SapI	GCTCTTC	1 cut(s)	438
SatI	GCNGC	8 cut(s)	782, 2025, 2175, 2211, 2308, 2403, 2640, 2774
Sau96I	GGNCC	6 cut(s)	68, 124, 144, 592, 2040, 2759
ScaI	AGTACT	1 cut(s)	1841
SduI	GDGCHC	8 cut(s)	1023, 1811, 2114, 2866, 2888, 2997, 3093, 3137
SexAI	ACCWGGT	1 cut(s)	2425
SfaNI	GCATC	8 cut(s)	328, 552, 604, 887, 1512, 1611, 2011, 2948
SfcI	CTRYAG	2 cut(s)	21, 2208
SfuI	TTCGAA	3 cut(s)	323, 1061, 1434
SinI	GGWCC	4 cut(s)	68, 144, 2040, 2759
SmiMI	CAYNNNNRTG	1 cut(s)	2418
SmlI	CTYRAG	3 cut(s)	1016, 1573, 3122
SmoI	CTYRAG	3 cut(s)	1016, 1573, 3122
SpeI	ACTAGT	1 cut(s)	1007
SphI	GCATGC	1 cut(s)	2687
SsiI	CCGC	7 cut(s)	971, 1126, 2203, 2671, 2732, 2894, 2956
SspMI	CTAG	3 cut(s)	449, 1008, 1986
SstI	GAGCTC	4 cut(s)	1023, 2888, 2997, 3137
StyI	CCWWGG	4 cut(s)	387, 645, 759, 2781
TaaI	ACNGT	6 cut(s)	190, 398, 1610, 1712, 2807, 2927
TaiI	ACGT	2 cut(s)	11, 239
TatI	WGTACW	1 cut(s)	1839
TfiI	GAWTC	6 cut(s)	1436, 1901, 1961, 2363, 2585, 3236
TscAI	CASTG	9 cut(s)	636, 1152, 1157, 1210, 1408, 2071, 2119, 2587, 3004
TseFI	GTSAC	2 cut(s)	1227, 1865
TseI	GCWGC	8 cut(s)	781, 2024, 2174, 2210, 2307, 2402, 2639, 2773
Tsp45I	GTSAC	2 cut(s)	1227, 1865
TspGWI	ACGGA	4 cut(s)	690, 1399, 1656, 2732
TspRI	CASTG	9 cut(s)	636, 1152, 1157, 1210, 1408, 2071, 2119, 2587, 3004
Van91I	CCANNNNNTGG	1 cut(s)	3083
Vha464I	CTTAAG	1 cut(s)	3122
VpaK11BI	GGWCC	4 cut(s)	68, 144, 2040, 2759
XapI	RAATTY	9 cut(s)	331, 727, 739, 1213, 2407, 2524, 2810, 2950, 3186
XceI	RCATGY	1 cut(s)	2687
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1106, 1634
XmnI	GAANNNNTTC	3 cut(s)	536, 849, 1698
XspI	CTAG	3 cut(s)	449, 1008, 1986
ZrmI	AGTACT	1 cut(s)	1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.