RchiOBHm_Chr3g0453331

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000862
Physical Location & Seq
Forward (+)
3763644 .. 3769909
6266 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42042

Sequence Viewer

Length: 1782 bp
ATGGGAGGGTGTTTTTCTGACGTGAAAGGTGGCAAGCAGGCCGTCGGTGGGGCCCGTCATCAACAACAGAGACCCATCAACAGCGACGCCGTTGAGCTCTTTAACCGCTCCCGAGGGGTTTATCCACTCTACACTCCGCTCGAGTTATCGCTGTCATCAACTAACTTGCTTGATCGTGACATTACGTCAAAGAGTGATCCCATGGTTGTGGTTTATGTAAAGAGAGGAGATGGTAAGCTAGAGGAACTAGGTAGAACTGAAGTAATATTGAATAGTTTGAATCCAGCGTGGATTGAGAAAATTACAGTTTCATATCAGTTTGAGGTTGTGCAGCCATTGATATTCCACGTCTATGATGTCGATACAAAGTATCACAACGTAAATGTAAAGACACTGAAGTTGGAGGATCAAGAATTTCTTGGGGAAGGCAGTTGTGTTCTTTCAGAGATAGTGACCAAACAAAGTCGAAGTTTAACCTTGAATCTGCATAGCAGAAGTGGGCGTGGAGGTTTGAGAGACTTCGGAACACTCACTGTCCATGCTGAAGAAACTATGGCTTCAAAGAGTGTTGTTGAGATAAAATTCCGCTGTTCCCAGTTGGAAAACAAAGACGTCTTCTCTAAAAGCGATCCTTTCTTAAGAGTATCTAGAATTGTTGAGAGTGGAGGTTCTGTTCCAATTTGCAAGACTGAAGTGGTGGATAACAATTTAAATCCAATCTGGAAACCACTATCCCTGAGTATGCAGCAGTTTGGAAGCAAGGATTTAAAGGGTCAGTTGTTTGTGGATCAATTTAATGAAAAGCAGCAGTTCAGCTTTCTCGATTATATTTCCAGTGGATTTGAGCTTAACTTCATGGTTGCTGTTGACTTTACGGGTAAGCAATGTGTGGTATTTTCAAATTGTTTATCATTTCCAATGTGTTTGCATGCCTTGATACTGAATTTTCTTACAGCTTCAAATGGAAATCCTCATCAACATGATTCATTGCACTACATTGATCCGTATGGCCGGTTGAATTCTTACCAGCAGGTTAGCAATTGTGATTTGTGCCTTCGTAATGAAATAACCTTAGGTGGTTTCTTCTGTGAGTATTTTAGTGGTATGGTCTACAAATGTAATCAAGTATATTATTTGCAGGCAATAACGGAAGTTGGGGAAGTCATTCAGTTTTATGATGCTGATAAACGGTTTCCTGCTTGGGGCTTTGGAGGAAGGACAGCTGGAGGACCTGTATCGCACTGTTTTAACTTGGATGGAACTGCAACTGGCTTTGAGGTTGAAGGAGTTCAAGGCATAATGACTGCTTATGCCAGTGCTCTACACAATGTTTCTCTATCAGGACCCACTTTGTTTGGCCCAGTGGTTAATGGGGCTGCAGAGATTGCTGGCAATTCTCTATTCCACAACAACAATAAGTACTATGTGCTAATGATCATAACGGATGGGATACTTACAGACCTGCAGGAAACAACAGATGCTTTCGTGAGGGCATCTGATCTTCCCCTCTCAGTTCTTATAGTTGGAGTAGGAAGTGCGGATTTCAAACAAATGGAGATTCTCGATGCTGACAATGGACTGCGATTGTCAAGTTCAACAGGTCGTGTGGCTACCAGAGACATTGTACAATTTGTTCCTATGAGAGAAGTGCAGAGTGGGCGCATTTCTGCGGTTCAATCGCTTCTCGAAGAGCTGCCTGGACAGTTCTTGAGTTACATGCGCTGCAGAGACGTTATGCCTCTCACTGTCCATGCAGCCCAATCATCTGCTCCACAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

593

Amino Acids

65.59

Weight (kDa)

5.53

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 52 - 157 2.3e-12 C2 domain
C2 PF00168 196 - 249 3.3e-06 C2 domain
Copine PF07002 377 - 578 2e-70 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 615
Acc36I ACCTGC 2 cut(s) 1021, 1470
AccBSI CCGCTC 2 cut(s) 108, 139
AccI GTMKAC 1 cut(s) 1110
AciI CCGC 5 cut(s) 106, 137, 586, 1538, 1670
AclWI GGATC 5 cut(s) 191, 414, 623, 795, 995
AcoI YGGCCR 1 cut(s) 1009
AcsI RAATTY 4 cut(s) 413, 581, 943, 1018
AcuI CTGAAG 4 cut(s) 279, 416, 564, 711
AcyI GRCGYC 2 cut(s) 87, 612
AfaI GTAC 2 cut(s) 1421, 1626
AfiI CCNNNNNNNGG 2 cut(s) 48, 1202
AflII CTTAAG 1 cut(s) 637
AhdI GACNNNNNGTC 1 cut(s) 184
AjiI CACGTC 2 cut(s) 22, 349
AjnI CCWGG 1 cut(s) 1696
AloI GAACNNNNNNTCC 2 cut(s) 657, 689
AluBI AGCT 7 cut(s) 97, 238, 816, 847, 956, 1223, 1693
AluI AGCT 7 cut(s) 97, 238, 816, 847, 956, 1223, 1693
Alw21I GWGCWC 2 cut(s) 99, 1321
Alw26I GTCTC 4 cut(s) 64, 510, 1611, 1722
AlwI GGATC 5 cut(s) 191, 414, 623, 795, 995
Ama87I CYCGRG 2 cut(s) 111, 140
AoxI GGCC 4 cut(s) 39, 51, 1009, 1357
ApaI GGGCCC 1 cut(s) 55
ApeKI GCWGC 7 cut(s) 331, 745, 805, 1376, 1693, 1722, 1754
ApoI RAATTY 4 cut(s) 413, 581, 943, 1018
Asp700I GAANNNNTTC 2 cut(s) 1164, 1287
AspLEI GCGC 2 cut(s) 1662, 1722
AspS9I GGNCC 5 cut(s) 51, 52, 1229, 1343, 1358
AvaI CYCGRG 2 cut(s) 111, 140
AvaII GGWCC 2 cut(s) 1229, 1343
AxyI CCTNAGG 1 cut(s) 1072
BaeGI GKGCMC 1 cut(s) 55
BanII GRGCYC 2 cut(s) 55, 99
BbsI GAAGAC 1 cut(s) 607
Bbv12I GWGCWC 2 cut(s) 99, 1321
BbvI GCAGC 7 cut(s) 343, 757, 817, 1363, 1680, 1709, 1766
BccI CCATC 4 cut(s) 83, 224, 1250, 1439
BceAI ACGGC 2 cut(s) 26, 74
BciT130I CCWGG 1 cut(s) 1698
BciVI GTATCC 1 cut(s) 1443
BclI TGATCA 1 cut(s) 1434
BcoDI GTCTC 4 cut(s) 64, 510, 1611, 1722
BfaI CTAG 3 cut(s) 239, 248, 648
BfmI CTRYAG 3 cut(s) 1377, 1463, 1723
BfrI CTTAAG 1 cut(s) 637
BfuAI ACCTGC 2 cut(s) 1021, 1470
BfuI GTATCC 1 cut(s) 1443
BisI GCNGC 7 cut(s) 332, 746, 806, 1377, 1694, 1723, 1755
BlsI GCNGC 7 cut(s) 333, 747, 807, 1378, 1695, 1724, 1756
BmcAI AGTACT 1 cut(s) 1421
Bme1390I CCNGG 1 cut(s) 1698
Bme18I GGWCC 2 cut(s) 1229, 1343
BmeRI GACNNNNNGTC 1 cut(s) 184
BmeT110I CYCGRG 2 cut(s) 111, 140
BmgBI CACGTC 2 cut(s) 22, 349
BmgT120I GGNCC 5 cut(s) 51, 52, 1229, 1343, 1358
BmiI GGNNCC 3 cut(s) 52, 53, 1345
BmrFI CCNGG 1 cut(s) 1698
BmrI ACTGGG 2 cut(s) 589, 1355
BmsI GCATC 4 cut(s) 1168, 1468, 1502, 1555
BmuI ACTGGG 2 cut(s) 589, 1355
BpiI GAAGAC 1 cut(s) 607
BpmI CTGGAG 1 cut(s) 1245
BpuEI CTTGAG 1 cut(s) 1729
BsaHI GRCGYC 2 cut(s) 87, 612
BsaI GGTCTC 1 cut(s) 64
BsaJI CCNNGG 2 cut(s) 112, 201
BsaXI ACNNNNNCTCC 4 cut(s) 657, 687, 1218, 1248
Bsc4I CCNNNNNNNGG 2 cut(s) 48, 1202
Bse118I RCCGGY 1 cut(s) 1011
Bse1I ACTGG 5 cut(s) 595, 834, 1273, 1314, 1361
Bse21I CCTNAGG 1 cut(s) 1072
Bse3DI GCAATG 2 cut(s) 890, 986
BseBI CCWGG 1 cut(s) 1698
BseDI CCNNGG 2 cut(s) 112, 201
BseGI GGATG 2 cut(s) 1261, 1450
BseLI CCNNNNNNNGG 2 cut(s) 48, 1202
BseMI GCAATG 2 cut(s) 890, 986
BseMII CTCAG 2 cut(s) 728, 1524
BseNI ACTGG 5 cut(s) 595, 834, 1273, 1314, 1361
BseRI GAGGAG 1 cut(s) 240
BseSI GKGCMC 1 cut(s) 55
BseXI GCAGC 7 cut(s) 343, 757, 817, 1363, 1680, 1709, 1766
BsgI GTGCAG 2 cut(s) 350, 1670
BshFI GGCC 4 cut(s) 41, 53, 1011, 1359
BsiHKAI GWGCWC 2 cut(s) 99, 1321
BsiHKCI CYCGRG 2 cut(s) 111, 140
BsiSI CCGG 1 cut(s) 1012
BslI CCNNNNNNNGG 2 cut(s) 48, 1202
BsmAI GTCTC 4 cut(s) 64, 510, 1611, 1722
BsmBI CGTCTC 1 cut(s) 1722
BsnI GGCC 4 cut(s) 41, 53, 1011, 1359
Bso31I GGTCTC 1 cut(s) 64
BsoBI CYCGRG 2 cut(s) 111, 140
Bsp120I GGGCCC 1 cut(s) 51
Bsp1286I GDGCHC 3 cut(s) 55, 99, 1321
Bsp1407I TGTACA 1 cut(s) 1624
Bsp143I GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
Bsp19I CCATGG 1 cut(s) 201
BspACI CCGC 5 cut(s) 106, 137, 586, 1538, 1670
BspANI GGCC 4 cut(s) 41, 53, 1011, 1359
BspCNI CTCAG 2 cut(s) 729, 1523
BspLI GGNNCC 3 cut(s) 52, 53, 1345
BspMAI CTGCAG 3 cut(s) 1381, 1467, 1727
BspMI ACCTGC 2 cut(s) 1021, 1470
BspPI GGATC 5 cut(s) 191, 414, 623, 795, 995
BspQI GCTCTTC 1 cut(s) 1683
BspTI CTTAAG 1 cut(s) 637
BspTNI GGTCTC 1 cut(s) 64
BsrBI CCGCTC 2 cut(s) 108, 139
BsrDI GCAATG 2 cut(s) 890, 986
BsrFI RCCGGY 1 cut(s) 1011
BsrGI TGTACA 1 cut(s) 1624
BsrI ACTGG 5 cut(s) 595, 834, 1273, 1314, 1361
BssAI RCCGGY 1 cut(s) 1011
BssECI CCNNGG 2 cut(s) 112, 201
BssMI GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
BssNI GRCGYC 2 cut(s) 87, 612
BssT1I CCWWGG 1 cut(s) 201
Bst2UI CCWGG 1 cut(s) 1698
Bst4CI ACNGT 6 cut(s) 307, 535, 1191, 1244, 1704, 1747
Bst6I CTCTTC 1 cut(s) 1683
BstACI GRCGYC 2 cut(s) 87, 612
BstAFI CTTAAG 1 cut(s) 637
BstAPI GCANNNNNTGC 1 cut(s) 1385
BstAUI TGTACA 1 cut(s) 1624
BstC8I GCNNGC 5 cut(s) 35, 39, 930, 1140, 1390
BstDEI CTNAG 3 cut(s) 737, 1072, 1510
BstDSI CCRYGG 1 cut(s) 201
BstF5I GGATG 2 cut(s) 1261, 1450
BstHHI GCGC 2 cut(s) 1662, 1722
BstKTI GATC 8 cut(s) 175, 199, 409, 631, 790, 1003, 1437, 1501
BstMAI GTCTC 4 cut(s) 64, 510, 1611, 1722
BstMBI GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
BstMWI GCNNNNNNNGC 2 cut(s) 1385, 1657
BstNI CCWGG 1 cut(s) 1698
BstNSI RCATGY 2 cut(s) 932, 1720
BstSCI CCNGG 1 cut(s) 1696
BstSFI CTRYAG 3 cut(s) 1377, 1463, 1723
BstSLI GKGCMC 1 cut(s) 55
BstV1I GCAGC 7 cut(s) 343, 757, 817, 1363, 1680, 1709, 1766
BstV2I GAAGAC 1 cut(s) 607
BstXI CCANNNNNNTGG 1 cut(s) 208
Bsu36I CCTNAGG 1 cut(s) 1072
BsuI GTATCC 1 cut(s) 1443
BsuRI GGCC 4 cut(s) 41, 53, 1011, 1359
BtgI CCRYGG 1 cut(s) 201
BtrI CACGTC 2 cut(s) 22, 349
BtsCI GGATG 2 cut(s) 1261, 1450
BtsIMutI CAGTG 7 cut(s) 392, 531, 841, 1240, 1321, 1368, 1743
BveI ACCTGC 2 cut(s) 1021, 1470
Cac8I GCNNGC 5 cut(s) 35, 39, 930, 1140, 1390
CfoI GCGC 2 cut(s) 1662, 1722
Cfr10I RCCGGY 1 cut(s) 1011
Cfr13I GGNCC 5 cut(s) 51, 52, 1229, 1343, 1358
CseI GACGC 1 cut(s) 95
Csp6I GTAC 2 cut(s) 1420, 1625
CspCI CAANNNNNGTGG 2 cut(s) 1336, 1371
CviAII CATG 7 cut(s) 202, 539, 856, 929, 980, 1717, 1751
CviQI GTAC 2 cut(s) 1420, 1625
DdeI CTNAG 3 cut(s) 737, 1072, 1510
DpnI GATC 8 cut(s) 174, 198, 408, 630, 789, 1002, 1436, 1500
DpnII GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
DraI TTTAAA 2 cut(s) 711, 768
DriI GACNNNNNGTC 1 cut(s) 184
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 1 cut(s) 1683
Eam1105I GACNNNNNGTC 1 cut(s) 184
EarI CTCTTC 1 cut(s) 1683
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 201
Eco24I GRGCYC 2 cut(s) 55, 99
Eco31I GGTCTC 1 cut(s) 64
Eco47I GGWCC 2 cut(s) 1229, 1343
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 4 cut(s) 279, 416, 564, 711
Eco81I CCTNAGG 1 cut(s) 1072
Eco88I CYCGRG 2 cut(s) 111, 140
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 3 cut(s) 51, 1229, 1343
EcoRI GAATTC 1 cut(s) 1018
EcoRII CCWGG 1 cut(s) 1696
EcoT14I CCWWGG 1 cut(s) 201
EcoT38I GRGCYC 2 cut(s) 55, 99
ErhI CCWWGG 1 cut(s) 201
Esp3I CGTCTC 1 cut(s) 1722
FaeI CATG 7 cut(s) 205, 542, 859, 932, 983, 1720, 1754
FalI AAGNNNNNCTT 4 cut(s) 402, 434, 616, 648
FatI CATG 7 cut(s) 201, 538, 855, 928, 979, 1716, 1750
FbaI TGATCA 1 cut(s) 1434
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 7 cut(s) 332, 746, 806, 1377, 1694, 1723, 1755
FokI GGATG 2 cut(s) 1268, 1457
FriOI GRGCYC 2 cut(s) 55, 99
Fsp4HI GCNGC 7 cut(s) 332, 746, 806, 1377, 1694, 1723, 1755
FspBI CTAG 3 cut(s) 239, 248, 648
GlaI GCGC 2 cut(s) 1661, 1721
GluI GCNGC 7 cut(s) 332, 746, 806, 1377, 1694, 1723, 1755
GsuI CTGGAG 1 cut(s) 1245
HaeIII GGCC 4 cut(s) 41, 53, 1011, 1359
HapII CCGG 1 cut(s) 1012
HgaI GACGC 1 cut(s) 95
HhaI GCGC 2 cut(s) 1662, 1722
Hin1I GRCGYC 2 cut(s) 87, 612
Hin1II CATG 7 cut(s) 205, 542, 859, 932, 983, 1720, 1754
Hin6I GCGC 2 cut(s) 1660, 1720
HinP1I GCGC 2 cut(s) 1660, 1720
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HinfI GANTC 4 cut(s) 280, 481, 983, 1558
HpaII CCGG 1 cut(s) 1012
Hpy166II GTNNAC 2 cut(s) 868, 1111
Hpy188I TCNGA 4 cut(s) 19, 445, 524, 1498
Hpy8I GTNNAC 2 cut(s) 868, 1111
Hpy99I CGWCG 2 cut(s) 47, 89
HpyAV CCTTC 4 cut(s) 419, 1064, 1209, 1277
HpyCH4III ACNGT 6 cut(s) 307, 535, 1191, 1244, 1704, 1747
HpyCH4IV ACGT 6 cut(s) 21, 185, 348, 378, 612, 1731
HpyF10VI GCNNNNNNNGC 2 cut(s) 1385, 1657
HpyF3I CTNAG 3 cut(s) 737, 1072, 1510
HpySE526I ACGT 6 cut(s) 21, 185, 348, 378, 612, 1731
Hsp92I GRCGYC 2 cut(s) 87, 612
Hsp92II CATG 7 cut(s) 205, 542, 859, 932, 983, 1720, 1754
HspAI GCGC 2 cut(s) 1660, 1720
Ksp22I TGATCA 1 cut(s) 1434
Kzo9I GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
LguI GCTCTTC 1 cut(s) 1683
LmnI GCTCC 2 cut(s) 113, 1774
Lsp1109I GCAGC 7 cut(s) 343, 757, 817, 1363, 1680, 1709, 1766
LweI GCATC 4 cut(s) 1168, 1468, 1502, 1555
MaeI CTAG 3 cut(s) 239, 248, 648
MaeII ACGT 6 cut(s) 21, 185, 348, 378, 612, 1731
MaeIII GTNAC 3 cut(s) 176, 451, 1712
MalI GATC 8 cut(s) 174, 198, 408, 630, 789, 1002, 1436, 1500
MbiI CCGCTC 2 cut(s) 108, 139
MboI GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
MboII GAAGA 5 cut(s) 557, 607, 1075, 1493, 1700
MfeI CAATTG 1 cut(s) 1039
MhlI GDGCHC 3 cut(s) 55, 99, 1321
MmeI TCCRAC 3 cut(s) 381, 579, 1504
MroXI GAANNNNTTC 2 cut(s) 1164, 1287
MseI TTAA 9 cut(s) 102, 473, 638, 710, 767, 795, 849, 1248, 1368
MslI CAYNNNNRTG 3 cut(s) 206, 351, 978
MspA1I CMGCKG 2 cut(s) 588, 1223
MspCI CTTAAG 1 cut(s) 637
MspI CCGG 1 cut(s) 1012
MspR9I CCNGG 1 cut(s) 1698
MunI CAATTG 1 cut(s) 1039
MvaI CCWGG 1 cut(s) 1698
MwoI GCNNNNNNNGC 2 cut(s) 1385, 1657
NcoI CCATGG 1 cut(s) 201
NdeII GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
NlaIII CATG 7 cut(s) 205, 542, 859, 932, 983, 1720, 1754
NlaIV GGNNCC 3 cut(s) 52, 53, 1345
NmuCI GTSAC 2 cut(s) 176, 451
NspI RCATGY 2 cut(s) 932, 1720
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 140
PciSI GCTCTTC 1 cut(s) 1683
PdmI GAANNNNTTC 2 cut(s) 1164, 1287
PfeI GAWTC 4 cut(s) 280, 481, 983, 1558
PkrI GCNGC 7 cut(s) 333, 747, 807, 1378, 1695, 1724, 1756
PpuMI RGGWCCY 2 cut(s) 1229, 1343
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 2 cut(s) 1229, 1343
Psp6I CCWGG 1 cut(s) 1696
PspGI CCWGG 1 cut(s) 1696
PspN4I GGNNCC 3 cut(s) 52, 53, 1345
PspOMI GGGCCC 1 cut(s) 51
PspPI GGNCC 5 cut(s) 51, 52, 1229, 1343, 1358
PspPPI RGGWCCY 2 cut(s) 1229, 1343
PspXI VCTCGAGB 1 cut(s) 140
PsrI GAACNNNNNNTAC 2 cut(s) 1617, 1649
PstI CTGCAG 3 cut(s) 1381, 1467, 1727
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 2 cut(s) 1421, 1626
RsaNI GTAC 2 cut(s) 1420, 1625
RseI CAYNNNNRTG 3 cut(s) 206, 351, 978
SacI GAGCTC 1 cut(s) 99
SapI GCTCTTC 1 cut(s) 1683
SaqAI TTAA 9 cut(s) 102, 473, 638, 710, 767, 795, 849, 1248, 1368
SatI GCNGC 7 cut(s) 332, 746, 806, 1377, 1694, 1723, 1755
Sau3AI GATC 8 cut(s) 172, 196, 406, 628, 787, 1000, 1434, 1498
Sau96I GGNCC 5 cut(s) 51, 52, 1229, 1343, 1358
SbfI CCTGCAGG 1 cut(s) 1467
ScaI AGTACT 1 cut(s) 1421
ScrFI CCNGG 1 cut(s) 1698
SdaI CCTGCAGG 1 cut(s) 1467
SduI GDGCHC 3 cut(s) 55, 99, 1321
SfaNI GCATC 4 cut(s) 1168, 1468, 1502, 1555
SfcI CTRYAG 3 cut(s) 1377, 1463, 1723
Sfr274I CTCGAG 1 cut(s) 140
SinI GGWCC 2 cut(s) 1229, 1343
SlaI CTCGAG 1 cut(s) 140
SmiI ATTTAAAT 1 cut(s) 711
SmiMI CAYNNNNRTG 3 cut(s) 206, 351, 978
SmlI CTYRAG 3 cut(s) 140, 637, 1708
SmoI CTYRAG 3 cut(s) 140, 637, 1708
SphI GCATGC 1 cut(s) 932
Sse8387I CCTGCAGG 1 cut(s) 1467
SsiI CCGC 5 cut(s) 106, 137, 586, 1538, 1670
SspI AATATT 1 cut(s) 267
SspMI CTAG 3 cut(s) 239, 248, 648
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 1 cut(s) 1696
StyI CCWWGG 1 cut(s) 201
SwaI ATTTAAAT 1 cut(s) 711
TaaI ACNGT 6 cut(s) 307, 535, 1191, 1244, 1704, 1747
TaiI ACGT 6 cut(s) 24, 188, 351, 381, 615, 1734
TaqI TCGA 6 cut(s) 141, 360, 466, 822, 1563, 1686
TatI WGTACW 2 cut(s) 1419, 1624
TfiI GAWTC 4 cut(s) 280, 481, 983, 1558
Tru1I TTAA 9 cut(s) 102, 473, 638, 710, 767, 795, 849, 1248, 1368
Tru9I TTAA 9 cut(s) 102, 473, 638, 710, 767, 795, 849, 1248, 1368
TscAI CASTG 7 cut(s) 399, 538, 841, 1247, 1321, 1368, 1750
TseFI GTSAC 2 cut(s) 176, 451
TseI GCWGC 7 cut(s) 331, 745, 805, 1376, 1693, 1722, 1754
Tsp45I GTSAC 2 cut(s) 176, 451
TspDTI ATGAA 5 cut(s) 300, 813, 844, 975, 1077
TspGWI ACGGA 3 cut(s) 993, 1163, 1457
TspRI CASTG 7 cut(s) 399, 538, 841, 1247, 1321, 1368, 1750
Vha464I CTTAAG 1 cut(s) 637
VpaK11BI GGWCC 2 cut(s) 1229, 1343
XapI RAATTY 4 cut(s) 413, 581, 943, 1018
XbaI TCTAGA 1 cut(s) 647
XceI RCATGY 2 cut(s) 932, 1720
XhoI CTCGAG 1 cut(s) 140
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 2 cut(s) 1164, 1287
XspI CTAG 3 cut(s) 239, 248, 648
ZraI GACGTC 1 cut(s) 613
ZrmI AGTACT 1 cut(s) 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.