RchiOBHm_Chr4g0410921

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000862
Physical Location & Seq
Forward (+)
34721058 .. 34726568
5511 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38179

Sequence Viewer

Length: 1842 bp
ATGGGAGGGTGTTTTTCCGACGTGAAAGGTGGCAAGCAGGCCGTGGGAGGGGCCCATCATCAAGAGAGGCCCATCAACAGGGACGCTGACTCAAACGACGCCGTTGAGCTCTTTAACCGCTCCCGAGGCGTTTTTCCACTGCACACTTCGCTCGAGTTATCGCTGTCAGCAACTAACTTGCTTGATCGTGACATTATGTCAAAGAGTGATCCCATGGTTGTGGTTTATGTGAAGAAAGGACATGGTAAGCTGGAGGAACTAGGGAGAACTGAAGTAATACTGAATAGTTTGAATCCAGTGTGGATTGAGAAAATTACAGTTTCATATCAGTTTGAGGTTGTGCAGCCATTGATATTCCACATCTATGATGTCGATACAAAATATCACAATGTAAATGTAAAGACGCTGAAGTTGGAGGATCAAGAATTTCTTGGGGAAGGCAGTTGCGTTCTTTCAGAGATAGTGACCAAACAAAGTCGAAGGTTAACCTTGAATCTGCATAACAGAAGTGGGCGGAGAGGTTTGAGAAATTTCGGAACACTCACTGTCCATGCTGAAGAAACTATGGCTTCGAAGAGTGTTGTTGAGATAAAATTCCATTGTTCCCAATTGGAAAACAAAGACCTCTTCTCTAAAAGTGATCCTTTCTTAAGAGTATCTAGAATTGTTGAGAGTGGAGGTTCTGTTCCAATCTGCAAGACTGAAGTGGTGGATAACAATTTAAATCCAATTTGGAAACCACTATCCCTGAGTATGCAGCAGTTTGGAAGCAAGGATAATCCATTAGTCATTGAGTGCTTTGATTTCAACAGCAATGGCAATCATGTTCTTATTGGGAAACTTCAAAAATCGGTGGCAGACCTGGAGAGATTATACAAAGAAAGAAGTGGGGTGAATTTCGTCGTTCCATCTTCTCATGGTCATGAAAAGGTTTCAAAGGGTCAGTTGTTTGTGGATCAATTTAATGAGAAGCAACAGTTCAGCTTTCTCGATTATATTTCCAGTGGATTTGAGCTTAACTTCATGGTTGCTGTTGACTTTACGGGTAAGCAATGCGTGGTATTTTCGAAATGTTTATCATTTCCAATGTATTTGCATGACTTGATACTGAATTTTCTCACAGCTTCAAATGGAAACCCTCAACAACATGATTCGTTGCACTACATTGATCCGTATGGCCGGTTGAATTCTTACCAGCAGGCAATAATGGAAGTTGGGGAAGTCATTCAGTTTTATGATGCTGATAAACGCTTTCCTGCTTGGGGCTTTGGAGGAAGGACAGCTGGAGGACCTGTATCGCACTGTTTTAACTTGGATGGAACTGCAACTGGCTTTGAGGTTGAAGGAGTTCAAGGCATAATGACTGCTTATGCCAGTGCCCTACACAATGTTTCTTTATCAGGACCCACTTTGTTTGGCCCAGTGGTTAATAGGGCTGCAGAGATTGCTGGCAATTCTCTTTTCCACAACAACAATAAGTACTATGTGTTGCTGATCATAACGGATGGGATACTTACAGACCTGCAGGAAACAACAGATGCTTTGGTGAGGGCATCTGATCTTCCCCTCTCAATTCTAGTAGTTGGAGTAGGAAGTGCGGATTTCAAACAAATGGAGATTCTCGATGCTGACAATGGACAGCGATTATCAAGTTCAACAGGCCGTGTGGCTACCAGAGACATCGTACAATTTGTTCCTATGAGAGAAGTGCAGAGTGGGCGCATTTCAGCAGTTCAATCGCTTCTCGAAGAGCTGCCTGGACAGTTCTTGAGTTACATGCGCTGCAGAGACATCATGCCTCTCACTGACCGTGCAGCCCAATCATCTGCTCCACAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

613

Amino Acids

68.03

Weight (kDa)

5.93

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 55 - 161 4.7e-13 C2 domain
C2 PF00168 200 - 289 2e-12 C2 domain
Copine PF07002 385 - 599 3.1e-77 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1530
AccBSI CCGCTC 1 cut(s) 120
AciI CCGC 3 cut(s) 118, 514, 1598
AclWI GGATC 5 cut(s) 203, 426, 635, 963, 1163
AcoI YGGCCR 1 cut(s) 1177
AcsI RAATTY 6 cut(s) 425, 529, 593, 895, 1111, 1186
AcuI CTGAAG 4 cut(s) 291, 428, 576, 723
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 2 cut(s) 1481, 1686
AfiI CCNNNNNNNGG 3 cut(s) 48, 78, 1262
AflII CTTAAG 1 cut(s) 649
AhdI GACNNNNNGTC 1 cut(s) 196
AjiI CACGTC 1 cut(s) 22
AjnI CCWGG 2 cut(s) 861, 1756
AloI GAACNNNNNNTCC 2 cut(s) 669, 701
AluBI AGCT 7 cut(s) 109, 250, 984, 1015, 1124, 1283, 1753
AluI AGCT 7 cut(s) 109, 250, 984, 1015, 1124, 1283, 1753
Alw21I GWGCWC 1 cut(s) 111
Alw26I GTCTC 2 cut(s) 1671, 1782
AlwI GGATC 5 cut(s) 203, 426, 635, 963, 1163
Ama87I CYCGRG 2 cut(s) 123, 152
AoxI GGCC 6 cut(s) 39, 51, 68, 1177, 1417, 1660
ApaI GGGCCC 1 cut(s) 55
ApeKI GCWGC 6 cut(s) 343, 757, 1436, 1753, 1782, 1814
ApoI RAATTY 6 cut(s) 425, 529, 593, 895, 1111, 1186
Asp700I GAANNNNTTC 2 cut(s) 1224, 1347
AspLEI GCGC 2 cut(s) 1722, 1782
AspS9I GGNCC 6 cut(s) 51, 52, 69, 1289, 1403, 1418
AsuHPI GGTGA 2 cut(s) 904, 1558
AsuII TTCGAA 2 cut(s) 572, 1067
AvaI CYCGRG 2 cut(s) 123, 152
AvaII GGWCC 2 cut(s) 1289, 1403
BaeGI GKGCMC 2 cut(s) 55, 1381
BanII GRGCYC 2 cut(s) 55, 111
Bbv12I GWGCWC 1 cut(s) 111
BbvI GCAGC 6 cut(s) 355, 769, 1423, 1740, 1769, 1826
BccI CCATC 5 cut(s) 63, 80, 916, 1310, 1499
BceAI ACGGC 3 cut(s) 26, 86, 1647
BcgI CGANNNNNNTGC 2 cut(s) 1719, 1753
BciT130I CCWGG 2 cut(s) 863, 1758
BciVI GTATCC 1 cut(s) 1503
BclI TGATCA 1 cut(s) 1494
BcoDI GTCTC 2 cut(s) 1671, 1782
BfaI CTAG 3 cut(s) 260, 660, 1577
BfmI CTRYAG 3 cut(s) 1437, 1523, 1783
BfrI CTTAAG 1 cut(s) 649
BfuAI ACCTGC 1 cut(s) 1530
BfuI GTATCC 1 cut(s) 1503
BisI GCNGC 6 cut(s) 344, 758, 1437, 1754, 1783, 1815
BlsI GCNGC 6 cut(s) 345, 759, 1438, 1755, 1784, 1816
BmcAI AGTACT 1 cut(s) 1481
Bme1390I CCNGG 2 cut(s) 863, 1758
Bme18I GGWCC 2 cut(s) 1289, 1403
BmeRI GACNNNNNGTC 1 cut(s) 196
BmeT110I CYCGRG 2 cut(s) 123, 152
BmgBI CACGTC 1 cut(s) 22
BmgT120I GGNCC 6 cut(s) 51, 52, 69, 1289, 1403, 1418
BmiI GGNNCC 3 cut(s) 52, 53, 1405
BmrFI CCNGG 2 cut(s) 863, 1758
BmrI ACTGGG 1 cut(s) 1415
BmsI GCATC 4 cut(s) 1228, 1528, 1562, 1615
BmuI ACTGGG 1 cut(s) 1415
BpmI CTGGAG 3 cut(s) 272, 884, 1305
Bpu14I TTCGAA 2 cut(s) 572, 1067
BpuEI CTTGAG 1 cut(s) 1789
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 3 cut(s) 42, 124, 213
BsaXI ACNNNNNCTCC 4 cut(s) 669, 699, 1278, 1308
Bsc4I CCNNNNNNNGG 3 cut(s) 48, 78, 1262
Bse118I RCCGGY 1 cut(s) 1179
Bse1I ACTGG 5 cut(s) 296, 1002, 1333, 1374, 1421
Bse3DI GCAATG 2 cut(s) 820, 1058
BseBI CCWGG 2 cut(s) 863, 1758
BseDI CCNNGG 3 cut(s) 42, 124, 213
BseGI GGATG 2 cut(s) 1321, 1510
BseLI CCNNNNNNNGG 3 cut(s) 48, 78, 1262
BseMI GCAATG 2 cut(s) 820, 1058
BseMII CTCAG 1 cut(s) 740
BseNI ACTGG 5 cut(s) 296, 1002, 1333, 1374, 1421
BseSI GKGCMC 2 cut(s) 55, 1381
BseXI GCAGC 6 cut(s) 355, 769, 1423, 1740, 1769, 1826
BsgI GTGCAG 4 cut(s) 125, 362, 1730, 1833
BshFI GGCC 6 cut(s) 41, 53, 70, 1179, 1419, 1662
BsiHKAI GWGCWC 1 cut(s) 111
BsiHKCI CYCGRG 2 cut(s) 123, 152
BsiSI CCGG 1 cut(s) 1180
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 3 cut(s) 48, 78, 1262
BsmAI GTCTC 2 cut(s) 1671, 1782
BsmFI GGGAC 1 cut(s) 95
BsnI GGCC 6 cut(s) 41, 53, 70, 1179, 1419, 1662
BsoBI CYCGRG 2 cut(s) 123, 152
Bsp119I TTCGAA 2 cut(s) 572, 1067
Bsp120I GGGCCC 1 cut(s) 51
Bsp1286I GDGCHC 3 cut(s) 55, 111, 1381
Bsp143I GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 3 cut(s) 118, 514, 1598
BspANI GGCC 6 cut(s) 41, 53, 70, 1179, 1419, 1662
BspCNI CTCAG 1 cut(s) 741
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 3 cut(s) 52, 53, 1405
BspMAI CTGCAG 3 cut(s) 1441, 1527, 1787
BspMI ACCTGC 1 cut(s) 1530
BspPI GGATC 5 cut(s) 203, 426, 635, 963, 1163
BspQI GCTCTTC 1 cut(s) 1743
BspT104I TTCGAA 2 cut(s) 572, 1067
BspTI CTTAAG 1 cut(s) 649
BsrBI CCGCTC 1 cut(s) 120
BsrDI GCAATG 2 cut(s) 820, 1058
BsrFI RCCGGY 1 cut(s) 1179
BsrI ACTGG 5 cut(s) 296, 1002, 1333, 1374, 1421
BssAI RCCGGY 1 cut(s) 1179
BssECI CCNNGG 3 cut(s) 42, 124, 213
BssMI GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
BssNI GRCGYC 1 cut(s) 99
BssT1I CCWWGG 1 cut(s) 213
Bst2UI CCWGG 2 cut(s) 863, 1758
Bst4CI ACNGT 6 cut(s) 319, 547, 978, 1304, 1764, 1811
Bst6I CTCTTC 3 cut(s) 569, 632, 1743
BstACI GRCGYC 1 cut(s) 99
BstAFI CTTAAG 1 cut(s) 649
BstAPI GCANNNNNTGC 1 cut(s) 1445
BstBI TTCGAA 2 cut(s) 572, 1067
BstC8I GCNNGC 4 cut(s) 35, 39, 1200, 1450
BstDEI CTNAG 1 cut(s) 749
BstDSI CCRYGG 2 cut(s) 42, 213
BstF5I GGATG 2 cut(s) 1321, 1510
BstHHI GCGC 2 cut(s) 1722, 1782
BstKTI GATC 8 cut(s) 187, 211, 421, 643, 958, 1171, 1497, 1561
BstMAI GTCTC 2 cut(s) 1671, 1782
BstMBI GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
BstMWI GCNNNNNNNGC 4 cut(s) 126, 148, 1445, 1717
BstNI CCWGG 2 cut(s) 863, 1758
BstNSI RCATGY 1 cut(s) 1780
BstSCI CCNGG 2 cut(s) 861, 1756
BstSFI CTRYAG 3 cut(s) 1437, 1523, 1783
BstSLI GKGCMC 2 cut(s) 55, 1381
BstV1I GCAGC 6 cut(s) 355, 769, 1423, 1740, 1769, 1826
BstXI CCANNNNNNTGG 1 cut(s) 220
BsuI GTATCC 1 cut(s) 1503
BsuRI GGCC 6 cut(s) 41, 53, 70, 1179, 1419, 1662
BtgI CCRYGG 2 cut(s) 42, 213
BtrI CACGTC 1 cut(s) 22
BtsCI GGATG 2 cut(s) 1321, 1510
BtsI GCAGTG 1 cut(s) 137
BtsIMutI CAGTG 8 cut(s) 137, 303, 543, 1009, 1300, 1381, 1428, 1803
BveI ACCTGC 1 cut(s) 1530
Cac8I GCNNGC 4 cut(s) 35, 39, 1200, 1450
CciI TCATGA 1 cut(s) 922
CfoI GCGC 2 cut(s) 1722, 1782
Cfr10I RCCGGY 1 cut(s) 1179
Cfr13I GGNCC 6 cut(s) 51, 52, 69, 1289, 1403, 1418
CseI GACGC 3 cut(s) 92, 107, 412
Csp6I GTAC 2 cut(s) 1480, 1685
CspCI CAANNNNNGTGG 2 cut(s) 1396, 1431
CviQI GTAC 2 cut(s) 1480, 1685
DdeI CTNAG 1 cut(s) 749
DpnI GATC 8 cut(s) 186, 210, 420, 642, 957, 1170, 1496, 1560
DpnII GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
DraI TTTAAA 1 cut(s) 723
DriI GACNNNNNGTC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 1177
Eam1104I CTCTTC 3 cut(s) 569, 632, 1743
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 3 cut(s) 569, 632, 1743
EciI GGCGGA 1 cut(s) 529
Ecl136II GAGCTC 1 cut(s) 109
Eco130I CCWWGG 1 cut(s) 213
Eco24I GRGCYC 2 cut(s) 55, 111
Eco47I GGWCC 2 cut(s) 1289, 1403
Eco53kI GAGCTC 1 cut(s) 109
Eco57I CTGAAG 4 cut(s) 291, 428, 576, 723
Eco88I CYCGRG 2 cut(s) 123, 152
EcoICRI GAGCTC 1 cut(s) 109
EcoO109I RGGNCCY 3 cut(s) 51, 1289, 1403
EcoRI GAATTC 1 cut(s) 1186
EcoRII CCWGG 2 cut(s) 861, 1756
EcoT14I CCWWGG 1 cut(s) 213
EcoT38I GRGCYC 2 cut(s) 55, 111
ErhI CCWWGG 1 cut(s) 213
FalI AAGNNNNNCTT 4 cut(s) 414, 446, 628, 660
FaqI GGGAC 1 cut(s) 95
FbaI TGATCA 1 cut(s) 1494
Fnu4HI GCNGC 6 cut(s) 344, 758, 1437, 1754, 1783, 1815
FokI GGATG 2 cut(s) 1328, 1517
FriOI GRGCYC 2 cut(s) 55, 111
Fsp4HI GCNGC 6 cut(s) 344, 758, 1437, 1754, 1783, 1815
FspBI CTAG 3 cut(s) 260, 660, 1577
GlaI GCGC 2 cut(s) 1721, 1781
GluI GCNGC 6 cut(s) 344, 758, 1437, 1754, 1783, 1815
GsuI CTGGAG 3 cut(s) 272, 884, 1305
HaeIII GGCC 6 cut(s) 41, 53, 70, 1179, 1419, 1662
HapII CCGG 1 cut(s) 1180
HgaI GACGC 3 cut(s) 92, 107, 412
HhaI GCGC 2 cut(s) 1722, 1782
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 2 cut(s) 1720, 1780
HinP1I GCGC 2 cut(s) 1720, 1780
HincII GTYRAC 2 cut(s) 486, 1036
HindII GTYRAC 2 cut(s) 486, 1036
HinfI GANTC 5 cut(s) 89, 292, 493, 1151, 1618
HpaI GTTAAC 1 cut(s) 486
HpaII CCGG 1 cut(s) 1180
HphI GGTGA 2 cut(s) 904, 1558
Hpy166II GTNNAC 2 cut(s) 486, 1036
Hpy188I TCNGA 4 cut(s) 19, 457, 536, 1558
Hpy8I GTNNAC 2 cut(s) 486, 1036
Hpy99I CGWCG 3 cut(s) 23, 101, 905
HpyAV CCTTC 4 cut(s) 431, 474, 1269, 1337
HpyCH4III ACNGT 6 cut(s) 319, 547, 978, 1304, 1764, 1811
HpyCH4IV ACGT 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 4 cut(s) 126, 148, 1445, 1717
HpyF3I CTNAG 1 cut(s) 749
HpySE526I ACGT 1 cut(s) 21
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 2 cut(s) 1720, 1780
Ksp22I TGATCA 1 cut(s) 1494
KspAI GTTAAC 1 cut(s) 486
Kzo9I GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
LguI GCTCTTC 1 cut(s) 1743
LmnI GCTCC 2 cut(s) 125, 1834
Lsp1109I GCAGC 6 cut(s) 355, 769, 1423, 1740, 1769, 1826
LweI GCATC 4 cut(s) 1228, 1528, 1562, 1615
MaeI CTAG 3 cut(s) 260, 660, 1577
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 3 cut(s) 188, 463, 1772
MalI GATC 8 cut(s) 186, 210, 420, 642, 957, 1170, 1496, 1560
MbiI CCGCTC 1 cut(s) 120
MboI GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
MboII GAAGA 7 cut(s) 244, 569, 586, 619, 903, 1553, 1760
MfeI CAATTG 1 cut(s) 608
MhlI GDGCHC 3 cut(s) 55, 111, 1381
MlyI GAGTC 1 cut(s) 83
MmeI TCCRAC 3 cut(s) 42, 393, 1564
MroXI GAANNNNTTC 2 cut(s) 1224, 1347
MseI TTAA 8 cut(s) 114, 485, 650, 722, 963, 1017, 1308, 1428
MslI CAYNNNNRTG 3 cut(s) 218, 363, 921
MspA1I CMGCKG 1 cut(s) 1283
MspCI CTTAAG 1 cut(s) 649
MspI CCGG 1 cut(s) 1180
MspR9I CCNGG 2 cut(s) 863, 1758
MunI CAATTG 1 cut(s) 608
MvaI CCWGG 2 cut(s) 863, 1758
MwoI GCNNNNNNNGC 4 cut(s) 126, 148, 1445, 1717
NcoI CCATGG 1 cut(s) 213
NdeII GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
NlaIV GGNNCC 3 cut(s) 52, 53, 1405
NmuCI GTSAC 2 cut(s) 188, 463
NspI RCATGY 1 cut(s) 1780
NspV TTCGAA 2 cut(s) 572, 1067
PaeR7I CTCGAG 1 cut(s) 152
PagI TCATGA 1 cut(s) 922
PciSI GCTCTTC 1 cut(s) 1743
PdmI GAANNNNTTC 2 cut(s) 1224, 1347
PfeI GAWTC 4 cut(s) 292, 493, 1151, 1618
PkrI GCNGC 6 cut(s) 345, 759, 1438, 1755, 1784, 1816
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
PpuMI RGGWCCY 2 cut(s) 1289, 1403
Psp124BI GAGCTC 1 cut(s) 111
Psp5II RGGWCCY 2 cut(s) 1289, 1403
Psp6I CCWGG 2 cut(s) 861, 1756
PspGI CCWGG 2 cut(s) 861, 1756
PspN4I GGNNCC 3 cut(s) 52, 53, 1405
PspOMI GGGCCC 1 cut(s) 51
PspPI GGNCC 6 cut(s) 51, 52, 69, 1289, 1403, 1418
PspPPI RGGWCCY 2 cut(s) 1289, 1403
PspXI VCTCGAGB 1 cut(s) 152
PsrI GAACNNNNNNTAC 2 cut(s) 1677, 1709
PstI CTGCAG 3 cut(s) 1441, 1527, 1787
PvuII CAGCTG 1 cut(s) 1283
RsaI GTAC 2 cut(s) 1481, 1686
RsaNI GTAC 2 cut(s) 1480, 1685
RseI CAYNNNNRTG 3 cut(s) 218, 363, 921
SacI GAGCTC 1 cut(s) 111
SapI GCTCTTC 1 cut(s) 1743
SaqAI TTAA 8 cut(s) 114, 485, 650, 722, 963, 1017, 1308, 1428
SatI GCNGC 6 cut(s) 344, 758, 1437, 1754, 1783, 1815
Sau3AI GATC 8 cut(s) 184, 208, 418, 640, 955, 1168, 1494, 1558
Sau96I GGNCC 6 cut(s) 51, 52, 69, 1289, 1403, 1418
SbfI CCTGCAGG 1 cut(s) 1527
ScaI AGTACT 1 cut(s) 1481
SchI GAGTC 1 cut(s) 83
ScrFI CCNGG 2 cut(s) 863, 1758
SdaI CCTGCAGG 1 cut(s) 1527
SduI GDGCHC 3 cut(s) 55, 111, 1381
SfaNI GCATC 4 cut(s) 1228, 1528, 1562, 1615
SfcI CTRYAG 3 cut(s) 1437, 1523, 1783
Sfr274I CTCGAG 1 cut(s) 152
SfuI TTCGAA 2 cut(s) 572, 1067
SinI GGWCC 2 cut(s) 1289, 1403
SlaI CTCGAG 1 cut(s) 152
SmiI ATTTAAAT 1 cut(s) 723
SmiMI CAYNNNNRTG 3 cut(s) 218, 363, 921
SmlI CTYRAG 3 cut(s) 152, 649, 1768
SmoI CTYRAG 3 cut(s) 152, 649, 1768
Sse8387I CCTGCAGG 1 cut(s) 1527
SsiI CCGC 3 cut(s) 118, 514, 1598
SspMI CTAG 3 cut(s) 260, 660, 1577
SstI GAGCTC 1 cut(s) 111
StyD4I CCNGG 2 cut(s) 861, 1756
StyI CCWWGG 1 cut(s) 213
SwaI ATTTAAAT 1 cut(s) 723
TaaI ACNGT 6 cut(s) 319, 547, 978, 1304, 1764, 1811
TaiI ACGT 1 cut(s) 24
TaqI TCGA 8 cut(s) 153, 372, 478, 572, 990, 1067, 1623, 1746
TatI WGTACW 1 cut(s) 1479
TfiI GAWTC 4 cut(s) 292, 493, 1151, 1618
Tru1I TTAA 8 cut(s) 114, 485, 650, 722, 963, 1017, 1308, 1428
Tru9I TTAA 8 cut(s) 114, 485, 650, 722, 963, 1017, 1308, 1428
TscAI CASTG 8 cut(s) 144, 303, 550, 1009, 1307, 1381, 1428, 1810
TseFI GTSAC 2 cut(s) 188, 463
TseI GCWGC 6 cut(s) 343, 757, 1436, 1753, 1782, 1814
Tsp45I GTSAC 2 cut(s) 188, 463
TspDTI ATGAA 3 cut(s) 312, 939, 1012
TspGWI ACGGA 2 cut(s) 1161, 1517
TspRI CASTG 8 cut(s) 144, 303, 550, 1009, 1307, 1381, 1428, 1810
Vha464I CTTAAG 1 cut(s) 649
VpaK11BI GGWCC 2 cut(s) 1289, 1403
XapI RAATTY 6 cut(s) 425, 529, 593, 895, 1111, 1186
XbaI TCTAGA 1 cut(s) 659
XceI RCATGY 1 cut(s) 1780
XhoI CTCGAG 1 cut(s) 152
XmnI GAANNNNTTC 2 cut(s) 1224, 1347
XspI CTAG 3 cut(s) 260, 660, 1577
ZrmI AGTACT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.