Rw3G003920

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000862
Physical Location & Seq
Forward (+)
3386818 .. 3392481
5664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003920.1

Sequence Viewer

Length: 1770 bp
ATGGGAGGGTGTTTTTCCGACGTGAAAGGTGGCAAGCAGGCGGTGGGAGGTGGGGCCCATAATCAACAACAGAGGCCCATCAACAGGGACGCTGACTCAAACGACGCCGTTGAGCTCTTTAACCGCTCCCGAGGGGTTTTTCCACTCTACACACCGCTCGAGTTATCGCTGTCAGCAACTAATTTGCTTGATCGTGACATTACGTCAAAGAGTGATCCCATGGTTGTGGTTTATGTGAAGAAAGGAGATGGTAAGCTAGAGGAACTAGGGAGAACTGAAGTAATACTGAATAGTTTGAATCCAGCGTGGATTGAGAAAATTACAGTTTCATATCAGTTTGAGGTTGTGCAGCCATTGATATTCCACGTCTATGATGTCGATACAAAATATCACAATGTGAATGTAAAGACACTGAAGTTGGAGGATCAAGAATTTCTTGGGGAAGGAAGTTGTGTTCTTTCAGAGATAGTGACCAAACAAAGTCGAAGTTTAACCTTGAATCTGCATAACAGAAGTGGGCGTGGAGGTTTGAGAAACTTCGGAACACTCACTGTCCATGCTGAAGAAACTATGGCTTCAAAGAGTGTTGTTGAAATAAAATTCCGTTGTTCCCAATTGGAAAACAAAGACATCTTCTCTAAAAGTGATCCTTTCTTAAGAGTATCTAGAATTGTTGAGAGTGGAGGTTCTGTTCCAATTTGCAAGACTGAAGTGGTGGATAACAATTTAAATCCAATCTGGAAACCACTATTCCTGAGTATGCAGCAGTTTGGAAGCAAGGATAATCCATTAATCATCGAGTGCTTTGATTTCAACAGTAATGGCAATCATGTTCTTATTGGGAAACTTCAAAAATCAGTGGCAGACCTGGAGAGATTATACCAAGAAAGAAGTGGGGTGAATTTTGTCACTCCATCTTTTCATGGTCATGAAAAGGTTTCAAAGGGTCAGTTGTTTGTGGATCAATTTAATGAGAAGCAACAGTTCAGCTTTCTTGATTATATTTCCAGTGGATTTGAACTTAACTTCATGGTTGCTGTTGACTTTACGGCTTCAAATGGAGACCCTCAACAACATGATTCATTGCACTACATTGATCCATATGGCCGGTTGAATTCTTACCAGCAGGCAATAACGGAAGTTGGGGAAGTCATTCAGTTTTATGATGCTGATAAACGGTTTCCTGCTTGGGGCTTTGGAGGAAGGACAGCTGGAGGGCCTGTATCGCACTGTTTTAACATGGATGGAACTGCAACTGGCTTTGAGGTCGAAGGAGTTCAAGGCATAATGACTGCTTATGCCAGAGCCCTACACAATGTTTCTCTATCAGGACCCACTTTGTTTGGCCCAGTGGTTACTAGGGCTGCAGAGATTGCTGGCAATTCTCTATTCCACAGCAACAATAAGTACTATGTGCTGCTGATCATAACGGATGGGATACTTACAGACCTGCAGGAAACAACAGATGCTTTGGTGCGGGCATCTGATCTTCCCCTCTCAGTTCTTATTGTTGGAGTAGGAAGTGCAGATTTCAAACAAATGGAGATTCTCGATGCTGACAATGGACCGCGATTGTCAAGTTCAACAGGTCGTGTGGCTACCAGAGACATTGTACAGTTTGTACCTATGAGAGAAGTGCAGAGTGGGCGCATTTCTGCGGTTCAATCGCTTCTCGAAGAGCTGCCTGGACAGTTCTTGAGTTACATGCGCTGCAGAGACATCATGCCTCTCACTGTCCATGCAGCCCAATCATCTGCTCCACAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

589

Amino Acids

65.07

Weight (kDa)

5.53

Isoelectric Point (pI)

36.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 57 - 163 2.6e-13 C2 domain
C2 PF00168 202 - 291 2.6e-12 C2 domain
Copine PF07002 361 - 575 1.7e-76 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1458
AccBSI CCGCTC 2 cut(s) 126, 157
AccII CGCG 1 cut(s) 1570
AciI CCGC 6 cut(s) 41, 124, 155, 1477, 1568, 1658
AclWI GGATC 5 cut(s) 209, 432, 641, 969, 1091
AcoI YGGCCR 1 cut(s) 1105
AcsI RAATTY 4 cut(s) 431, 599, 901, 1114
AcuI CTGAAG 4 cut(s) 297, 434, 582, 729
AcyI GRCGYC 1 cut(s) 105
AdeI CACNNNGTG 1 cut(s) 397
AfaI GTAC 3 cut(s) 1409, 1614, 1623
AfiI CCNNNNNNNGG 2 cut(s) 84, 1190
AflII CTTAAG 1 cut(s) 655
AhdI GACNNNNNGTC 1 cut(s) 202
AjiI CACGTC 2 cut(s) 22, 367
AjnI CCWGG 2 cut(s) 867, 1684
AloI GAACNNNNNNTCC 4 cut(s) 438, 470, 675, 707
AluBI AGCT 5 cut(s) 115, 256, 990, 1211, 1681
AluI AGCT 5 cut(s) 115, 256, 990, 1211, 1681
Alw21I GWGCWC 1 cut(s) 117
Alw26I GTCTC 3 cut(s) 1056, 1599, 1710
AlwI GGATC 5 cut(s) 209, 432, 641, 969, 1091
Ama87I CYCGRG 2 cut(s) 129, 158
AoxI GGCC 5 cut(s) 54, 74, 1105, 1217, 1345
ApaI GGGCCC 1 cut(s) 58
ApeKI GCWGC 7 cut(s) 349, 763, 1364, 1417, 1681, 1710, 1742
ApoI RAATTY 4 cut(s) 431, 599, 901, 1114
AseI ATTAAT 1 cut(s) 791
Asp700I GAANNNNTTC 2 cut(s) 1152, 1275
AspLEI GCGC 2 cut(s) 1650, 1710
AspS9I GGNCC 7 cut(s) 54, 55, 75, 1217, 1331, 1346, 1565
AsuHPI GGTGA 1 cut(s) 910
AvaI CYCGRG 2 cut(s) 129, 158
AvaII GGWCC 2 cut(s) 1331, 1565
BaeGI GKGCMC 1 cut(s) 58
BanII GRGCYC 3 cut(s) 58, 117, 1309
Bbv12I GWGCWC 1 cut(s) 117
BbvI GCAGC 7 cut(s) 361, 775, 1351, 1404, 1668, 1697, 1754
BccI CCATC 5 cut(s) 86, 242, 922, 1238, 1427
BceAI ACGGC 2 cut(s) 92, 1065
BciT130I CCWGG 2 cut(s) 869, 1686
BciVI GTATCC 1 cut(s) 1431
BclI TGATCA 1 cut(s) 1422
BcoDI GTCTC 3 cut(s) 1056, 1599, 1710
BfaI CTAG 4 cut(s) 257, 266, 666, 1359
BfmI CTRYAG 3 cut(s) 1365, 1451, 1711
BfrI CTTAAG 1 cut(s) 655
BfuAI ACCTGC 1 cut(s) 1458
BfuI GTATCC 1 cut(s) 1431
BisI GCNGC 7 cut(s) 350, 764, 1365, 1418, 1682, 1711, 1743
BlsI GCNGC 7 cut(s) 351, 765, 1366, 1419, 1683, 1712, 1744
BmcAI AGTACT 1 cut(s) 1409
Bme1390I CCNGG 2 cut(s) 869, 1686
Bme18I GGWCC 2 cut(s) 1331, 1565
BmeRI GACNNNNNGTC 1 cut(s) 202
BmeT110I CYCGRG 2 cut(s) 129, 158
BmgBI CACGTC 2 cut(s) 22, 367
BmgT120I GGNCC 7 cut(s) 54, 55, 75, 1217, 1331, 1346, 1565
BmiI GGNNCC 3 cut(s) 55, 56, 1333
BmrFI CCNGG 2 cut(s) 869, 1686
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 4 cut(s) 1156, 1456, 1490, 1543
BmuI ACTGGG 1 cut(s) 1343
BpmI CTGGAG 2 cut(s) 890, 1233
BpuEI CTTGAG 1 cut(s) 1717
BsaHI GRCGYC 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 1056
BsaJI CCNNGG 2 cut(s) 130, 219
BsaXI ACNNNNNCTCC 4 cut(s) 675, 705, 1206, 1236
Bsc4I CCNNNNNNNGG 2 cut(s) 84, 1190
Bse118I RCCGGY 1 cut(s) 1107
Bse1I ACTGG 3 cut(s) 1008, 1261, 1349
Bse3DI GCAATG 1 cut(s) 1082
BseBI CCWGG 2 cut(s) 869, 1686
BseDI CCNNGG 2 cut(s) 130, 219
BseGI GGATG 2 cut(s) 1249, 1438
BseLI CCNNNNNNNGG 2 cut(s) 84, 1190
BseMI GCAATG 1 cut(s) 1082
BseMII CTCAG 2 cut(s) 746, 1512
BseNI ACTGG 3 cut(s) 1008, 1261, 1349
BseSI GKGCMC 1 cut(s) 58
BseXI GCAGC 7 cut(s) 361, 775, 1351, 1404, 1668, 1697, 1754
BsgI GTGCAG 3 cut(s) 368, 1545, 1658
Bsh1236I CGCG 1 cut(s) 1570
BshFI GGCC 5 cut(s) 56, 76, 1107, 1219, 1347
BsiHKAI GWGCWC 1 cut(s) 117
BsiHKCI CYCGRG 2 cut(s) 129, 158
BsiSI CCGG 1 cut(s) 1108
BslFI GGGAC 1 cut(s) 101
BslI CCNNNNNNNGG 2 cut(s) 84, 1190
BsmAI GTCTC 3 cut(s) 1056, 1599, 1710
BsmFI GGGAC 1 cut(s) 101
BsnI GGCC 5 cut(s) 56, 76, 1107, 1219, 1347
Bso31I GGTCTC 1 cut(s) 1056
BsoBI CYCGRG 2 cut(s) 129, 158
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 3 cut(s) 58, 117, 1309
Bsp1407I TGTACA 1 cut(s) 1612
Bsp143I GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 6 cut(s) 41, 124, 155, 1477, 1568, 1658
BspANI GGCC 5 cut(s) 56, 76, 1107, 1219, 1347
BspCNI CTCAG 2 cut(s) 747, 1511
BspFNI CGCG 1 cut(s) 1570
BspHI TCATGA 1 cut(s) 928
BspLI GGNNCC 3 cut(s) 55, 56, 1333
BspMAI CTGCAG 3 cut(s) 1369, 1455, 1715
BspMI ACCTGC 1 cut(s) 1458
BspPI GGATC 5 cut(s) 209, 432, 641, 969, 1091
BspQI GCTCTTC 1 cut(s) 1671
BspTI CTTAAG 1 cut(s) 655
BspTNI GGTCTC 1 cut(s) 1056
BsrBI CCGCTC 2 cut(s) 126, 157
BsrDI GCAATG 1 cut(s) 1082
BsrFI RCCGGY 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 1612
BsrI ACTGG 3 cut(s) 1008, 1261, 1349
BssAI RCCGGY 1 cut(s) 1107
BssECI CCNNGG 2 cut(s) 130, 219
BssMI GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 869, 1686
Bst4CI ACNGT 9 cut(s) 325, 553, 818, 984, 1179, 1232, 1617, 1692, 1735
Bst6I CTCTTC 1 cut(s) 1671
BstACI GRCGYC 1 cut(s) 105
BstAFI CTTAAG 1 cut(s) 655
BstAPI GCANNNNNTGC 1 cut(s) 1373
BstAUI TGTACA 1 cut(s) 1612
BstC8I GCNNGC 5 cut(s) 35, 39, 1128, 1378, 1479
BstDEI CTNAG 2 cut(s) 755, 1498
BstDSI CCRYGG 1 cut(s) 219
BstF5I GGATG 2 cut(s) 1249, 1438
BstFNI CGCG 1 cut(s) 1570
BstHHI GCGC 2 cut(s) 1650, 1710
BstKTI GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
BstMAI GTCTC 3 cut(s) 1056, 1599, 1710
BstMBI GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
BstMWI GCNNNNNNNGC 3 cut(s) 1225, 1373, 1645
BstNI CCWGG 2 cut(s) 869, 1686
BstNSI RCATGY 1 cut(s) 1708
BstSCI CCNGG 2 cut(s) 867, 1684
BstSFI CTRYAG 3 cut(s) 1365, 1451, 1711
BstSLI GKGCMC 1 cut(s) 58
BstUI CGCG 1 cut(s) 1570
BstV1I GCAGC 7 cut(s) 361, 775, 1351, 1404, 1668, 1697, 1754
BstXI CCANNNNNNTGG 1 cut(s) 226
BsuI GTATCC 1 cut(s) 1431
BsuRI GGCC 5 cut(s) 56, 76, 1107, 1219, 1347
BtgI CCRYGG 1 cut(s) 219
BtrI CACGTC 2 cut(s) 22, 367
BtsCI GGATG 2 cut(s) 1249, 1438
BtsIMutI CAGTG 7 cut(s) 410, 549, 864, 1015, 1228, 1356, 1731
BveI ACCTGC 1 cut(s) 1458
Cac8I GCNNGC 5 cut(s) 35, 39, 1128, 1378, 1479
CciI TCATGA 1 cut(s) 928
CfoI GCGC 2 cut(s) 1650, 1710
Cfr10I RCCGGY 1 cut(s) 1107
Cfr13I GGNCC 7 cut(s) 54, 55, 75, 1217, 1331, 1346, 1565
CseI GACGC 2 cut(s) 98, 113
Csp6I GTAC 3 cut(s) 1408, 1613, 1622
CspCI CAANNNNNGTGG 2 cut(s) 1324, 1359
CviQI GTAC 3 cut(s) 1408, 1613, 1622
DdeI CTNAG 2 cut(s) 755, 1498
DpnI GATC 8 cut(s) 192, 216, 426, 648, 963, 1098, 1424, 1488
DpnII GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
DraI TTTAAA 1 cut(s) 729
DraIII CACNNNGTG 1 cut(s) 397
DriI GACNNNNNGTC 1 cut(s) 202
EaeI YGGCCR 1 cut(s) 1105
Eam1104I CTCTTC 1 cut(s) 1671
Eam1105I GACNNNNNGTC 1 cut(s) 202
EarI CTCTTC 1 cut(s) 1671
Ecl136II GAGCTC 1 cut(s) 115
Eco130I CCWWGG 1 cut(s) 219
Eco24I GRGCYC 3 cut(s) 58, 117, 1309
Eco31I GGTCTC 1 cut(s) 1056
Eco47I GGWCC 2 cut(s) 1331, 1565
Eco53kI GAGCTC 1 cut(s) 115
Eco57I CTGAAG 4 cut(s) 297, 434, 582, 729
Eco88I CYCGRG 2 cut(s) 129, 158
EcoICRI GAGCTC 1 cut(s) 115
EcoO109I RGGNCCY 3 cut(s) 54, 1217, 1331
EcoRI GAATTC 1 cut(s) 1114
EcoRII CCWGG 2 cut(s) 867, 1684
EcoT14I CCWWGG 1 cut(s) 219
EcoT38I GRGCYC 3 cut(s) 58, 117, 1309
ErhI CCWWGG 1 cut(s) 219
FalI AAGNNNNNCTT 4 cut(s) 420, 452, 634, 666
FaqI GGGAC 1 cut(s) 101
FauI CCCGC 1 cut(s) 1470
FauNDI CATATG 1 cut(s) 1102
FbaI TGATCA 1 cut(s) 1422
Fnu4HI GCNGC 7 cut(s) 350, 764, 1365, 1418, 1682, 1711, 1743
FokI GGATG 2 cut(s) 1256, 1445
FriOI GRGCYC 3 cut(s) 58, 117, 1309
Fsp4HI GCNGC 7 cut(s) 350, 764, 1365, 1418, 1682, 1711, 1743
FspBI CTAG 4 cut(s) 257, 266, 666, 1359
GlaI GCGC 2 cut(s) 1649, 1709
GluI GCNGC 7 cut(s) 350, 764, 1365, 1418, 1682, 1711, 1743
GsuI CTGGAG 2 cut(s) 890, 1233
HaeIII GGCC 5 cut(s) 56, 76, 1107, 1219, 1347
HapII CCGG 1 cut(s) 1108
HgaI GACGC 2 cut(s) 98, 113
HhaI GCGC 2 cut(s) 1650, 1710
Hin1I GRCGYC 1 cut(s) 105
Hin6I GCGC 2 cut(s) 1648, 1708
HinP1I GCGC 2 cut(s) 1648, 1708
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HinfI GANTC 5 cut(s) 95, 298, 499, 1079, 1546
HpaII CCGG 1 cut(s) 1108
HphI GGTGA 1 cut(s) 910
Hpy166II GTNNAC 1 cut(s) 1042
Hpy188I TCNGA 4 cut(s) 19, 463, 542, 1486
Hpy8I GTNNAC 1 cut(s) 1042
Hpy99I CGWCG 2 cut(s) 23, 107
HpyAV CCTTC 3 cut(s) 437, 1197, 1265
HpyCH4III ACNGT 9 cut(s) 325, 553, 818, 984, 1179, 1232, 1617, 1692, 1735
HpyCH4IV ACGT 3 cut(s) 21, 203, 366
HpyF10VI GCNNNNNNNGC 3 cut(s) 1225, 1373, 1645
HpyF3I CTNAG 2 cut(s) 755, 1498
HpySE526I ACGT 3 cut(s) 21, 203, 366
Hsp92I GRCGYC 1 cut(s) 105
HspAI GCGC 2 cut(s) 1648, 1708
Ksp22I TGATCA 1 cut(s) 1422
Kzo9I GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
LguI GCTCTTC 1 cut(s) 1671
LmnI GCTCC 2 cut(s) 131, 1762
Lsp1109I GCAGC 7 cut(s) 361, 775, 1351, 1404, 1668, 1697, 1754
LweI GCATC 4 cut(s) 1156, 1456, 1490, 1543
MaeI CTAG 4 cut(s) 257, 266, 666, 1359
MaeII ACGT 3 cut(s) 21, 203, 366
MaeIII GTNAC 5 cut(s) 194, 469, 907, 1354, 1700
MalI GATC 8 cut(s) 192, 216, 426, 648, 963, 1098, 1424, 1488
MbiI CCGCTC 2 cut(s) 126, 157
MboI GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
MboII GAAGA 5 cut(s) 250, 575, 625, 1481, 1688
MfeI CAATTG 1 cut(s) 614
MhlI GDGCHC 3 cut(s) 58, 117, 1309
MlyI GAGTC 1 cut(s) 89
MmeI TCCRAC 3 cut(s) 42, 399, 1492
MroXI GAANNNNTTC 2 cut(s) 1152, 1275
MseI TTAA 8 cut(s) 120, 491, 656, 728, 791, 969, 1023, 1236
MslI CAYNNNNRTG 3 cut(s) 224, 369, 927
MspA1I CMGCKG 1 cut(s) 1211
MspCI CTTAAG 1 cut(s) 655
MspI CCGG 1 cut(s) 1108
MspR9I CCNGG 2 cut(s) 869, 1686
MunI CAATTG 1 cut(s) 614
MvaI CCWGG 2 cut(s) 869, 1686
MvnI CGCG 1 cut(s) 1570
MwoI GCNNNNNNNGC 3 cut(s) 1225, 1373, 1645
NcoI CCATGG 1 cut(s) 219
NdeI CATATG 1 cut(s) 1102
NdeII GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
NlaIV GGNNCC 3 cut(s) 55, 56, 1333
NmuCI GTSAC 3 cut(s) 194, 469, 907
NspI RCATGY 1 cut(s) 1708
PaeR7I CTCGAG 1 cut(s) 158
PagI TCATGA 1 cut(s) 928
PciSI GCTCTTC 1 cut(s) 1671
PdmI GAANNNNTTC 2 cut(s) 1152, 1275
PfeI GAWTC 4 cut(s) 298, 499, 1079, 1546
PkrI GCNGC 7 cut(s) 351, 765, 1366, 1419, 1683, 1712, 1744
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
PpuMI RGGWCCY 1 cut(s) 1331
PshBI ATTAAT 1 cut(s) 791
Psp124BI GAGCTC 1 cut(s) 117
Psp5II RGGWCCY 1 cut(s) 1331
Psp6I CCWGG 2 cut(s) 867, 1684
PspGI CCWGG 2 cut(s) 867, 1684
PspN4I GGNNCC 3 cut(s) 55, 56, 1333
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 7 cut(s) 54, 55, 75, 1217, 1331, 1346, 1565
PspPPI RGGWCCY 1 cut(s) 1331
PspXI VCTCGAGB 1 cut(s) 158
PstI CTGCAG 3 cut(s) 1369, 1455, 1715
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 3 cut(s) 1409, 1614, 1623
RsaNI GTAC 3 cut(s) 1408, 1613, 1622
RseI CAYNNNNRTG 3 cut(s) 224, 369, 927
SacI GAGCTC 1 cut(s) 117
SapI GCTCTTC 1 cut(s) 1671
SaqAI TTAA 8 cut(s) 120, 491, 656, 728, 791, 969, 1023, 1236
SatI GCNGC 7 cut(s) 350, 764, 1365, 1418, 1682, 1711, 1743
Sau3AI GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
Sau96I GGNCC 7 cut(s) 54, 55, 75, 1217, 1331, 1346, 1565
SbfI CCTGCAGG 1 cut(s) 1455
ScaI AGTACT 1 cut(s) 1409
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 2 cut(s) 869, 1686
SdaI CCTGCAGG 1 cut(s) 1455
SduI GDGCHC 3 cut(s) 58, 117, 1309
SfaNI GCATC 4 cut(s) 1156, 1456, 1490, 1543
SfcI CTRYAG 3 cut(s) 1365, 1451, 1711
Sfr274I CTCGAG 1 cut(s) 158
SinI GGWCC 2 cut(s) 1331, 1565
SlaI CTCGAG 1 cut(s) 158
SmiI ATTTAAAT 1 cut(s) 729
SmiMI CAYNNNNRTG 3 cut(s) 224, 369, 927
SmlI CTYRAG 3 cut(s) 158, 655, 1696
SmoI CTYRAG 3 cut(s) 158, 655, 1696
Sse8387I CCTGCAGG 1 cut(s) 1455
SsiI CCGC 6 cut(s) 41, 124, 155, 1477, 1568, 1658
SspMI CTAG 4 cut(s) 257, 266, 666, 1359
SstI GAGCTC 1 cut(s) 117
StyD4I CCNGG 2 cut(s) 867, 1684
StyI CCWWGG 1 cut(s) 219
SwaI ATTTAAAT 1 cut(s) 729
TaaI ACNGT 9 cut(s) 325, 553, 818, 984, 1179, 1232, 1617, 1692, 1735
TaiI ACGT 3 cut(s) 24, 206, 369
TaqI TCGA 7 cut(s) 159, 378, 484, 798, 1269, 1551, 1674
TatI WGTACW 2 cut(s) 1407, 1612
TfiI GAWTC 4 cut(s) 298, 499, 1079, 1546
Tru1I TTAA 8 cut(s) 120, 491, 656, 728, 791, 969, 1023, 1236
Tru9I TTAA 8 cut(s) 120, 491, 656, 728, 791, 969, 1023, 1236
TscAI CASTG 7 cut(s) 417, 556, 864, 1015, 1235, 1356, 1738
TseFI GTSAC 3 cut(s) 194, 469, 907
TseI GCWGC 7 cut(s) 349, 763, 1364, 1417, 1681, 1710, 1742
Tsp45I GTSAC 3 cut(s) 194, 469, 907
TspDTI ATGAA 5 cut(s) 318, 911, 945, 1018, 1071
TspGWI ACGGA 3 cut(s) 593, 1151, 1445
TspRI CASTG 7 cut(s) 417, 556, 864, 1015, 1235, 1356, 1738
Vha464I CTTAAG 1 cut(s) 655
VpaK11BI GGWCC 2 cut(s) 1331, 1565
VspI ATTAAT 1 cut(s) 791
XapI RAATTY 4 cut(s) 431, 599, 901, 1114
XbaI TCTAGA 1 cut(s) 665
XceI RCATGY 1 cut(s) 1708
XcmI CCANNNNNNNNNTGG 1 cut(s) 890
XhoI CTCGAG 1 cut(s) 158
XmnI GAANNNNTTC 2 cut(s) 1152, 1275
XspI CTAG 4 cut(s) 257, 266, 666, 1359
ZrmI AGTACT 1 cut(s) 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.