Rw3G003950

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000862
Physical Location & Seq
Forward (+)
3412238 .. 3417811
5574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003950.1

Sequence Viewer

Length: 1815 bp
ATGGGAGGGTGTTTTTCCGACGTGAAAGGTGGCAAGCAGGCCGTGGGAGGTGGGGCCCATCATCTTCAACAACAGAGGCCCATCAACTGGGACGCTGACACAAACGACGCCGTTGAGCTCTTTAACCGCTCCCGTGGCGTTTTTCCACTCTACACTCCGCTCGAGTTATCGCTGTCAGCCACTAACTTGCTTGATCGTGATATTATGTCAAAGAGTGATCCCATGGTTGTGGCTTATGTGAAGAAAGGAGATGGTAAGCTAGAGGAACTAGGGAGAACTGAAGTAATACTGAATAGTTTGAATCCAGCGTGGATTGAGAAAATTACAGTTTCATATCAGTTTGAGGTTGTGCAGCCATTGATATTCCATGTCTATGATGTCGATACAAAATATCGCAATGTAAATGTAAAGACACTGAAGTTGGAGGATCAAGAATTTCTTGGGGAAGGCAATTGCGTTCTTTCAGAGATAGTGACCAAACAAAGTCGAAGTTTAACCTTGAATCTCCATAACAGAAATGGGCGTGGTGGTTTGAGAAACTTTGGAACACTCACTGTCCATGCTGAAGAAACTATGGCTTCAAGGAGTGTTGTTGAGATAAAATTCCATTGTTCCCAATTGGAAAACAAAGACCTCTTCTCTAAAAGTGATCCTTTCTTAAGAGTATCTAGAATTGTTGAGAGTGGAGGTTCTGTTCCAATTTGCAAGACTGAAGTGGTGGATAACAATTTAAATCCAATCTGGAAACCACTTTTCCTGAGTATGCAGCAGTTTGGAAGCAAGGATAATCCATTAATCATCGAGTGCTTTGATTTTAACAACAATGGCAATCATGTTCTTATTGGGAAACTTCAAAAATCAGTGGCAGACCTGGAGAGATTGTACAAAGAAAGAAGTGGGGTGAATTTCGTCATTCCATCTTCTCATGGTCATGAAAAGGTTTCAAAGGGTCAGTTGTTTGTGGATCAATTTAATGAGAAGCAACAGTTCAGTTTTCTGGATTATATTTCCAGTGGATTTGAGCTTAACTTCATGGTTGCGGTTGACTTTACGGCTTCAAATGGAAACCCTCAACAACATGATTCATTGCACTACAATGATCCGTATGGCCGGTTGAATTCTTACCAGCAGGCAATTACAGAAGTTGGGGAAGTCATTCAGTTTTATGATGCTGATAAACGGTTTCCTGCTTGGGGCTTTGGAGGAAGGACAGCTGGAGGGCCTGTATCGCACTGTTTTAACTTGGATGGAACTGCAACTGGCTTTGAGGTCGAAGGAGTTCAAGGCATAATGACTGCTTATGCCAGTGCCCTACACAATGTTTCTCTATCAGGACCCACTTTGTTTGGCCCAGTGGTTACTAGGGCTGCAGAGATTGCTGGCAATTCTCTATTCCACAGCAACAATAAGTACTATGTGCTGCTGATCATAACGGATGGGATACTTACAGACCTGCAGGAAACAATAGATGCTTTGGTGAGGGCATCTGATCTTCCCCTCTCAATTCTAATAGTTGGAGTAGGAAGTGCAGATTTCAAACAAATGGAGATTCTCGATGCTGACAATGGACAGCAATTATCAAGTTCAACAGGCCGTGTGGCTACCAGAGACATTGTACAGTTTGTTCCTATGAGAGAAGTGCAGAGTGGGCGCATTTCCGTTGTTCAATCGCTTCTCGAAGAGCTGCCTGGACAGTTCTTGAGTTACATGCGCAGCAGAGACATCATGCCTCTCACTGTCCATGCAGCCCAATCATCTGCTCCACAGGACCACAACTTTAGAACAGCACAAGCACAGCATGGTGAAGTTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

604

Amino Acids

66.85

Weight (kDa)

5.55

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 58 - 164 2.4e-12 C2 domain
C2 PF00168 203 - 292 5.8e-12 C2 domain
Copine PF07002 362 - 576 1.7e-76 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1712
Acc36I ACCTGC 1 cut(s) 1461
AccB7I CCANNNNNTGG 1 cut(s) 87
AccBSI CCGCTC 2 cut(s) 129, 160
AciI CCGC 3 cut(s) 127, 158, 1040
AclWI GGATC 5 cut(s) 212, 435, 644, 972, 1094
AcoI YGGCCR 1 cut(s) 1108
AcsI RAATTY 4 cut(s) 434, 602, 904, 1117
AcuI CTGAAG 4 cut(s) 300, 437, 585, 732
AcyI GRCGYC 1 cut(s) 108
AfaI GTAC 3 cut(s) 884, 1412, 1617
AfiI CCNNNNNNNGG 2 cut(s) 87, 1193
AflII CTTAAG 1 cut(s) 658
AjiI CACGTC 1 cut(s) 22
AjnI CCWGG 2 cut(s) 870, 1687
AloI GAACNNNNNNTCC 2 cut(s) 678, 710
AluBI AGCT 5 cut(s) 118, 259, 1024, 1214, 1684
AluI AGCT 5 cut(s) 118, 259, 1024, 1214, 1684
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 2 cut(s) 1602, 1713
AlwI GGATC 5 cut(s) 212, 435, 644, 972, 1094
Ama87I CYCGRG 1 cut(s) 161
AoxI GGCC 7 cut(s) 39, 54, 77, 1108, 1220, 1348, 1591
ApaI GGGCCC 1 cut(s) 58
ApeKI GCWGC 7 cut(s) 352, 766, 1367, 1420, 1684, 1713, 1745
ApoI RAATTY 4 cut(s) 434, 602, 904, 1117
AseI ATTAAT 1 cut(s) 794
Asp700I GAANNNNTTC 2 cut(s) 1155, 1278
AspLEI GCGC 2 cut(s) 1653, 1713
AspS9I GGNCC 7 cut(s) 54, 55, 78, 1220, 1334, 1349, 1768
AsuHPI GGTGA 3 cut(s) 913, 1489, 1814
AvaI CYCGRG 1 cut(s) 161
AvaII GGWCC 2 cut(s) 1334, 1768
BaeGI GKGCMC 2 cut(s) 58, 1312
BanII GRGCYC 2 cut(s) 58, 120
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 7 cut(s) 364, 778, 1354, 1407, 1671, 1725, 1757
BccI CCATC 6 cut(s) 66, 89, 245, 925, 1241, 1430
BceAI ACGGC 4 cut(s) 26, 95, 1068, 1578
BciT130I CCWGG 2 cut(s) 872, 1689
BciVI GTATCC 1 cut(s) 1434
BclI TGATCA 1 cut(s) 1425
BcoDI GTCTC 2 cut(s) 1602, 1713
BfaI CTAG 4 cut(s) 260, 269, 669, 1362
BfmI CTRYAG 2 cut(s) 1368, 1454
BfrI CTTAAG 1 cut(s) 658
BfuAI ACCTGC 1 cut(s) 1461
BfuI GTATCC 1 cut(s) 1434
BisI GCNGC 7 cut(s) 353, 767, 1368, 1421, 1685, 1714, 1746
BlsI GCNGC 7 cut(s) 354, 768, 1369, 1422, 1686, 1715, 1747
BmcAI AGTACT 1 cut(s) 1412
Bme1390I CCNGG 2 cut(s) 872, 1689
Bme18I GGWCC 2 cut(s) 1334, 1768
BmeT110I CYCGRG 1 cut(s) 161
BmgBI CACGTC 1 cut(s) 22
BmgT120I GGNCC 7 cut(s) 54, 55, 78, 1220, 1334, 1349, 1768
BmiI GGNNCC 3 cut(s) 55, 56, 1336
BmrFI CCNGG 2 cut(s) 872, 1689
BmrI ACTGGG 2 cut(s) 97, 1346
BmsI GCATC 4 cut(s) 1159, 1459, 1493, 1546
BmuI ACTGGG 2 cut(s) 97, 1346
BpmI CTGGAG 2 cut(s) 893, 1236
BpuEI CTTGAG 1 cut(s) 1720
BsaHI GRCGYC 1 cut(s) 108
BsaJI CCNNGG 3 cut(s) 42, 133, 222
BsaXI ACNNNNNCTCC 6 cut(s) 678, 708, 866, 896, 1209, 1239
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 1193
Bse118I RCCGGY 1 cut(s) 1110
Bse1I ACTGG 5 cut(s) 92, 1011, 1264, 1305, 1352
Bse3DI GCAATG 2 cut(s) 403, 1085
BseBI CCWGG 2 cut(s) 872, 1689
BseDI CCNNGG 3 cut(s) 42, 133, 222
BseGI GGATG 2 cut(s) 1252, 1441
BseLI CCNNNNNNNGG 2 cut(s) 87, 1193
BseMI GCAATG 2 cut(s) 403, 1085
BseMII CTCAG 1 cut(s) 749
BseNI ACTGG 5 cut(s) 92, 1011, 1264, 1305, 1352
BseSI GKGCMC 2 cut(s) 58, 1312
BseXI GCAGC 7 cut(s) 364, 778, 1354, 1407, 1671, 1725, 1757
BsgI GTGCAG 3 cut(s) 371, 1548, 1661
BshFI GGCC 7 cut(s) 41, 56, 79, 1110, 1222, 1350, 1593
BsiHKAI GWGCWC 1 cut(s) 120
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 1 cut(s) 1111
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 2 cut(s) 87, 1193
BsmAI GTCTC 2 cut(s) 1602, 1713
BsmFI GGGAC 1 cut(s) 104
BsnI GGCC 7 cut(s) 41, 56, 79, 1110, 1222, 1350, 1593
BsoBI CYCGRG 1 cut(s) 161
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 3 cut(s) 58, 120, 1312
Bsp1407I TGTACA 2 cut(s) 882, 1615
Bsp143I GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 3 cut(s) 127, 158, 1040
BspANI GGCC 7 cut(s) 41, 56, 79, 1110, 1222, 1350, 1593
BspCNI CTCAG 1 cut(s) 750
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 3 cut(s) 55, 56, 1336
BspMAI CTGCAG 2 cut(s) 1372, 1458
BspMI ACCTGC 1 cut(s) 1461
BspPI GGATC 5 cut(s) 212, 435, 644, 972, 1094
BspQI GCTCTTC 1 cut(s) 1674
BspTI CTTAAG 1 cut(s) 658
BsrBI CCGCTC 2 cut(s) 129, 160
BsrDI GCAATG 2 cut(s) 403, 1085
BsrFI RCCGGY 1 cut(s) 1110
BsrGI TGTACA 2 cut(s) 882, 1615
BsrI ACTGG 5 cut(s) 92, 1011, 1264, 1305, 1352
BssAI RCCGGY 1 cut(s) 1110
BssECI CCNNGG 3 cut(s) 42, 133, 222
BssMI GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 222
Bst2UI CCWGG 2 cut(s) 872, 1689
Bst4CI ACNGT 8 cut(s) 328, 556, 987, 1182, 1235, 1620, 1695, 1738
Bst6I CTCTTC 2 cut(s) 641, 1674
BstACI GRCGYC 1 cut(s) 108
BstAFI CTTAAG 1 cut(s) 658
BstAPI GCANNNNNTGC 1 cut(s) 1376
BstAUI TGTACA 2 cut(s) 882, 1615
BstC8I GCNNGC 4 cut(s) 35, 39, 1131, 1381
BstDEI CTNAG 1 cut(s) 758
BstDSI CCRYGG 3 cut(s) 42, 133, 222
BstF5I GGATG 2 cut(s) 1252, 1441
BstHHI GCGC 2 cut(s) 1653, 1713
BstKTI GATC 8 cut(s) 196, 220, 430, 652, 967, 1102, 1428, 1492
BstMAI GTCTC 2 cut(s) 1602, 1713
BstMBI GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
BstMWI GCNNNNNNNGC 4 cut(s) 135, 1228, 1376, 1648
BstNI CCWGG 2 cut(s) 872, 1689
BstNSI RCATGY 1 cut(s) 1711
BstSCI CCNGG 2 cut(s) 870, 1687
BstSFI CTRYAG 2 cut(s) 1368, 1454
BstSLI GKGCMC 2 cut(s) 58, 1312
BstV1I GCAGC 7 cut(s) 364, 778, 1354, 1407, 1671, 1725, 1757
BstXI CCANNNNNNTGG 1 cut(s) 229
BsuI GTATCC 1 cut(s) 1434
BsuRI GGCC 7 cut(s) 41, 56, 79, 1110, 1222, 1350, 1593
BtgI CCRYGG 3 cut(s) 42, 133, 222
BtrI CACGTC 1 cut(s) 22
BtsCI GGATG 2 cut(s) 1252, 1441
BtsIMutI CAGTG 8 cut(s) 413, 552, 867, 1018, 1231, 1312, 1359, 1734
BveI ACCTGC 1 cut(s) 1461
Cac8I GCNNGC 4 cut(s) 35, 39, 1131, 1381
CciI TCATGA 1 cut(s) 931
CfoI GCGC 2 cut(s) 1653, 1713
Cfr10I RCCGGY 1 cut(s) 1110
Cfr13I GGNCC 7 cut(s) 54, 55, 78, 1220, 1334, 1349, 1768
CseI GACGC 2 cut(s) 101, 116
Csp6I GTAC 3 cut(s) 883, 1411, 1616
CspCI CAANNNNNGTGG 2 cut(s) 1327, 1362
CviQI GTAC 3 cut(s) 883, 1411, 1616
DdeI CTNAG 1 cut(s) 758
DpnI GATC 8 cut(s) 195, 219, 429, 651, 966, 1101, 1427, 1491
DpnII GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 1 cut(s) 1108
Eam1104I CTCTTC 2 cut(s) 641, 1674
EarI CTCTTC 2 cut(s) 641, 1674
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 222
Eco24I GRGCYC 2 cut(s) 58, 120
Eco47I GGWCC 2 cut(s) 1334, 1768
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 4 cut(s) 300, 437, 585, 732
Eco88I CYCGRG 1 cut(s) 161
EcoICRI GAGCTC 1 cut(s) 118
EcoO109I RGGNCCY 3 cut(s) 54, 1220, 1334
EcoRI GAATTC 1 cut(s) 1117
EcoRII CCWGG 2 cut(s) 870, 1687
EcoT14I CCWWGG 1 cut(s) 222
EcoT38I GRGCYC 2 cut(s) 58, 120
ErhI CCWWGG 1 cut(s) 222
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 637, 669
FaqI GGGAC 1 cut(s) 104
FbaI TGATCA 1 cut(s) 1425
Fnu4HI GCNGC 7 cut(s) 353, 767, 1368, 1421, 1685, 1714, 1746
FokI GGATG 2 cut(s) 1259, 1448
FriOI GRGCYC 2 cut(s) 58, 120
Fsp4HI GCNGC 7 cut(s) 353, 767, 1368, 1421, 1685, 1714, 1746
FspBI CTAG 4 cut(s) 260, 269, 669, 1362
FspI TGCGCA 1 cut(s) 1712
GlaI GCGC 2 cut(s) 1652, 1712
GluI GCNGC 7 cut(s) 353, 767, 1368, 1421, 1685, 1714, 1746
GsuI CTGGAG 2 cut(s) 893, 1236
HaeIII GGCC 7 cut(s) 41, 56, 79, 1110, 1222, 1350, 1593
HapII CCGG 1 cut(s) 1111
HgaI GACGC 2 cut(s) 101, 116
HhaI GCGC 2 cut(s) 1653, 1713
Hin1I GRCGYC 1 cut(s) 108
Hin6I GCGC 2 cut(s) 1651, 1711
HinP1I GCGC 2 cut(s) 1651, 1711
HincII GTYRAC 1 cut(s) 1045
HindII GTYRAC 1 cut(s) 1045
HinfI GANTC 4 cut(s) 301, 502, 1082, 1549
HpaII CCGG 1 cut(s) 1111
HphI GGTGA 3 cut(s) 913, 1489, 1814
Hpy166II GTNNAC 1 cut(s) 1045
Hpy188I TCNGA 3 cut(s) 19, 466, 1489
Hpy8I GTNNAC 1 cut(s) 1045
Hpy99I CGWCG 2 cut(s) 23, 110
HpyAV CCTTC 3 cut(s) 440, 1200, 1268
HpyCH4III ACNGT 8 cut(s) 328, 556, 987, 1182, 1235, 1620, 1695, 1738
HpyCH4IV ACGT 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 1228, 1376, 1648
HpyF3I CTNAG 1 cut(s) 758
HpySE526I ACGT 1 cut(s) 21
Hsp92I GRCGYC 1 cut(s) 108
HspAI GCGC 2 cut(s) 1651, 1711
Ksp22I TGATCA 1 cut(s) 1425
Kzo9I GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
LguI GCTCTTC 1 cut(s) 1674
LmnI GCTCC 2 cut(s) 134, 1765
Lsp1109I GCAGC 7 cut(s) 364, 778, 1354, 1407, 1671, 1725, 1757
LweI GCATC 4 cut(s) 1159, 1459, 1493, 1546
MaeI CTAG 4 cut(s) 260, 269, 669, 1362
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 3 cut(s) 472, 1357, 1703
MalI GATC 8 cut(s) 195, 219, 429, 651, 966, 1101, 1427, 1491
MbiI CCGCTC 2 cut(s) 129, 160
MboI GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
MboII GAAGA 7 cut(s) 56, 253, 578, 628, 912, 1484, 1691
MfeI CAATTG 2 cut(s) 451, 617
MhlI GDGCHC 3 cut(s) 58, 120, 1312
MmeI TCCRAC 3 cut(s) 42, 402, 1495
MroXI GAANNNNTTC 2 cut(s) 1155, 1278
MseI TTAA 9 cut(s) 123, 494, 659, 731, 794, 816, 972, 1026, 1239
MslI CAYNNNNRTG 4 cut(s) 227, 372, 930, 1095
MspA1I CMGCKG 1 cut(s) 1214
MspCI CTTAAG 1 cut(s) 658
MspI CCGG 1 cut(s) 1111
MspR9I CCNGG 2 cut(s) 872, 1689
MunI CAATTG 2 cut(s) 451, 617
MvaI CCWGG 2 cut(s) 872, 1689
MwoI GCNNNNNNNGC 4 cut(s) 135, 1228, 1376, 1648
NcoI CCATGG 1 cut(s) 222
NdeII GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
NlaIV GGNNCC 3 cut(s) 55, 56, 1336
NmuCI GTSAC 1 cut(s) 472
NsbI TGCGCA 1 cut(s) 1712
NspI RCATGY 1 cut(s) 1711
PaeR7I CTCGAG 1 cut(s) 161
PagI TCATGA 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 1674
PdmI GAANNNNTTC 2 cut(s) 1155, 1278
PfeI GAWTC 4 cut(s) 301, 502, 1082, 1549
PflMI CCANNNNNTGG 1 cut(s) 87
PkrI GCNGC 7 cut(s) 354, 768, 1369, 1422, 1686, 1715, 1747
PpuMI RGGWCCY 1 cut(s) 1334
PshBI ATTAAT 1 cut(s) 794
Psp124BI GAGCTC 1 cut(s) 120
Psp5II RGGWCCY 1 cut(s) 1334
Psp6I CCWGG 2 cut(s) 870, 1687
PspGI CCWGG 2 cut(s) 870, 1687
PspN4I GGNNCC 3 cut(s) 55, 56, 1336
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 7 cut(s) 54, 55, 78, 1220, 1334, 1349, 1768
PspPPI RGGWCCY 1 cut(s) 1334
PspXI VCTCGAGB 1 cut(s) 161
PsrI GAACNNNNNNTAC 2 cut(s) 1608, 1640
PstI CTGCAG 2 cut(s) 1372, 1458
PvuII CAGCTG 1 cut(s) 1214
RsaI GTAC 3 cut(s) 884, 1412, 1617
RsaNI GTAC 3 cut(s) 883, 1411, 1616
RseI CAYNNNNRTG 4 cut(s) 227, 372, 930, 1095
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 1674
SaqAI TTAA 9 cut(s) 123, 494, 659, 731, 794, 816, 972, 1026, 1239
SatI GCNGC 7 cut(s) 353, 767, 1368, 1421, 1685, 1714, 1746
Sau3AI GATC 8 cut(s) 193, 217, 427, 649, 964, 1099, 1425, 1489
Sau96I GGNCC 7 cut(s) 54, 55, 78, 1220, 1334, 1349, 1768
SbfI CCTGCAGG 1 cut(s) 1458
ScaI AGTACT 1 cut(s) 1412
ScrFI CCNGG 2 cut(s) 872, 1689
SdaI CCTGCAGG 1 cut(s) 1458
SduI GDGCHC 3 cut(s) 58, 120, 1312
SfaNI GCATC 4 cut(s) 1159, 1459, 1493, 1546
SfcI CTRYAG 2 cut(s) 1368, 1454
Sfr274I CTCGAG 1 cut(s) 161
SinI GGWCC 2 cut(s) 1334, 1768
SlaI CTCGAG 1 cut(s) 161
SmiI ATTTAAAT 1 cut(s) 732
SmiMI CAYNNNNRTG 4 cut(s) 227, 372, 930, 1095
SmlI CTYRAG 3 cut(s) 161, 658, 1699
SmoI CTYRAG 3 cut(s) 161, 658, 1699
Sse8387I CCTGCAGG 1 cut(s) 1458
SsiI CCGC 3 cut(s) 127, 158, 1040
SspMI CTAG 4 cut(s) 260, 269, 669, 1362
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 2 cut(s) 870, 1687
StyI CCWWGG 1 cut(s) 222
SwaI ATTTAAAT 1 cut(s) 732
TaaI ACNGT 8 cut(s) 328, 556, 987, 1182, 1235, 1620, 1695, 1738
TaiI ACGT 1 cut(s) 24
TaqI TCGA 7 cut(s) 162, 381, 487, 801, 1272, 1554, 1677
TatI WGTACW 3 cut(s) 882, 1410, 1615
TfiI GAWTC 4 cut(s) 301, 502, 1082, 1549
Tru1I TTAA 9 cut(s) 123, 494, 659, 731, 794, 816, 972, 1026, 1239
Tru9I TTAA 9 cut(s) 123, 494, 659, 731, 794, 816, 972, 1026, 1239
TscAI CASTG 8 cut(s) 420, 559, 867, 1018, 1238, 1312, 1359, 1741
TseFI GTSAC 1 cut(s) 472
TseI GCWGC 7 cut(s) 352, 766, 1367, 1420, 1684, 1713, 1745
Tsp45I GTSAC 1 cut(s) 472
TspDTI ATGAA 4 cut(s) 321, 948, 1021, 1074
TspGWI ACGGA 3 cut(s) 1092, 1448, 1648
TspRI CASTG 8 cut(s) 420, 559, 867, 1018, 1238, 1312, 1359, 1741
Van91I CCANNNNNTGG 1 cut(s) 87
Vha464I CTTAAG 1 cut(s) 658
VpaK11BI GGWCC 2 cut(s) 1334, 1768
VspI ATTAAT 1 cut(s) 794
XapI RAATTY 4 cut(s) 434, 602, 904, 1117
XbaI TCTAGA 1 cut(s) 668
XceI RCATGY 1 cut(s) 1711
XcmI CCANNNNNNNNNTGG 1 cut(s) 515
XhoI CTCGAG 1 cut(s) 161
XmnI GAANNNNTTC 2 cut(s) 1155, 1278
XspI CTAG 4 cut(s) 260, 269, 669, 1362
ZrmI AGTACT 1 cut(s) 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.