Rroxscaffold_6G00430320

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000862
Physical Location & Seq
Forward (+)
50477996 .. 50483471
5476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00430320.1

Sequence Viewer

Length: 1767 bp
ATGGGAGGGTGTTTTTCCGACGTGAAAGGTGGCAAGCAGGCCGTGGGAGGTGGGGCCCATCATCAAGAGAGGCCCATCAACAGAGACGCTGACTCAAACGACGCCGTTGAGCTCTTTAACCGCTCCCGAGGGGTTTTTCCACTCCACACTTCGCTCGAGTTATCGCTGTCAGCAACTAACTTGCTTGATCGTGACATTACGTCAAAGAGTGATCCCATGGTTGTGGTTTATGTGAAGAAACGAGATGGTAAGCTGGAGGAACTAGGGAGAACTGAAGTGATACTGAATAGTTTGAATCCAGCGTGGATTGAGAAAATTACAGTTTCATATCAGTTTGAGGTTGTGCAGCCATTGATATTCCACGTCTATGATGTCGATACAAAATATCACAATGTAAATGTAAAGACACTGAAGTTGGAGGATCAAGAATTTCTTGGCGAAGGCAGTTGCGTTCTTTCAGAGATAGTGACCAAACAAAGTCAAAGTTTAACCTTGAATCTGCATAACAGAAGTGGGCAGGGAGGTTTCAGAAATTTTGGAACACTCACTGTCCATGCTGAAGAAACTATGGCTTCGAAGAGTGTTGTTGAGATAAAATTCCGTTGTTCCCAATTGGAAAACAAAGACCTCTTCTCTAAAAGTGATCCTTTCTTAAGAGTATCTAGAATTGTTGAGAGTGGAGGTTCTGTTCCAATTTGCAAGACCGAAGTGGTGGATAACAATTTAAATCCAATTTGGAAACCACTATCCCTGAGTATGCAGCAGTTTGGAAGCAAGGACAATCCATTAGTCATCGAGTGCTTTGATTTCAACAGCAATGGCAATCATGTTCTTATTGGGAAACTTCAAAAATCAGTGGCAGACCTGGAGAGATTATACAAAGAAAGAAGTGGGGTGAATTTCGTCATTCCATCTTCTCATGGTCATGAAAAGGTTTCAAAGGGTCAGTTGTTTGTGGATCAATTTGATGAGAAGCAACAGTTCAGCTTTCTCGATTATATTTCCAGTGGATTTGAGCTTAACTTCATGGTTGCTGTTGACTTTACGGCTTCAAATGGAAACCCTCAACAACATGATTCGTTGCACTACATTGATCCGTATGGCCGGTTGAATTCTTACCAGCAGGCAATAACAGAAGTTGGGGAAGTCATTGAGTTTTATGATGCTGATAAACGGTTTCCTGCTTGGGGTTTTGGAGGAAGGACAGCTGGAGGACCTGTATCGCACTGTTTTAACTTGGACGGAACTGCAACTGGCTTTGAGGTTGAAGGAGTTCAAGGCATAATGACTGCTTATGCCAGTGCCCTACACAATGTTTCTCTATCAGGACCCACGTTGTTTGGCCCAGTGGTTAATAGGGCTGCAGAGATTGCTGGCAATTCTCTTTTCCACAACAACAATAAGTACTATGTGTTGCTGATCATAACGGATGGGATACTTACAGACCTGCAGGAAACAACAGATGCTTTGGTGAGGGCATCTGATCTTCCCCTCTCAATTCTAGTAGTTGGAGTAGGAAGTGCGGATTTCAAACAAATGGAGATTCTCGATGCTGACAATGGACAGCGATTAGCGAGTTCAACAGGTCGTGTGGCTACCAGAGACATTGTACAATTTGTTCCCATGAAAGAAGTGCAGAGTGGGCGCATTTCTGCAGTTCAATCGCTTCTCGAAGAGCTGCCTGGACAGTTCTTGAGTTACATGCGCTGCAGAGACATCATGCCTCTCACTGTCCGTGCAGCCCAATCATCAGCTCCACAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

588

Amino Acids

64.85

Weight (kDa)

5.46

Isoelectric Point (pI)

37.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 56 - 162 2.3e-13 C2 domain
C2 PF00168 201 - 290 1.3e-12 C2 domain
Copine PF07002 360 - 574 2.9e-76 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1455
AccBSI CCGCTC 1 cut(s) 123
AciI CCGC 2 cut(s) 121, 1523
AclWI GGATC 5 cut(s) 206, 429, 638, 966, 1088
AcoI YGGCCR 1 cut(s) 1102
AcsI RAATTY 5 cut(s) 428, 532, 596, 898, 1111
AcuI CTGAAG 3 cut(s) 294, 431, 579
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 2 cut(s) 1406, 1611
AfiI CCNNNNNNNGG 1 cut(s) 1187
AflII CTTAAG 1 cut(s) 652
AhdI GACNNNNNGTC 1 cut(s) 199
AjiI CACGTC 2 cut(s) 22, 364
AjnI CCWGG 2 cut(s) 864, 1681
AloI GAACNNNNNNTCC 2 cut(s) 672, 704
AluBI AGCT 7 cut(s) 112, 253, 987, 1018, 1208, 1678, 1754
AluI AGCT 7 cut(s) 112, 253, 987, 1018, 1208, 1678, 1754
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 3 cut(s) 78, 1596, 1707
AlwI GGATC 5 cut(s) 206, 429, 638, 966, 1088
Ama87I CYCGRG 2 cut(s) 126, 155
AoxI GGCC 5 cut(s) 39, 54, 71, 1102, 1342
ApaI GGGCCC 1 cut(s) 58
ApeKI GCWGC 6 cut(s) 346, 760, 1361, 1678, 1707, 1739
ApoI RAATTY 5 cut(s) 428, 532, 596, 898, 1111
Asp700I GAANNNNTTC 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 1647, 1707
AspS9I GGNCC 6 cut(s) 54, 55, 72, 1214, 1328, 1343
AsuHPI GGTGA 2 cut(s) 907, 1483
AsuII TTCGAA 1 cut(s) 575
AvaI CYCGRG 2 cut(s) 126, 155
AvaII GGWCC 2 cut(s) 1214, 1328
BaeGI GKGCMC 2 cut(s) 58, 1306
BanII GRGCYC 2 cut(s) 58, 114
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 6 cut(s) 358, 772, 1348, 1665, 1694, 1751
BccI CCATC 5 cut(s) 66, 83, 239, 919, 1424
BceAI ACGGC 3 cut(s) 26, 89, 1062
BcgI CGANNNNNNTGC 2 cut(s) 1644, 1678
BciT130I CCWGG 2 cut(s) 866, 1683
BciVI GTATCC 1 cut(s) 1428
BclI TGATCA 1 cut(s) 1419
BcoDI GTCTC 3 cut(s) 78, 1596, 1707
BfaI CTAG 3 cut(s) 263, 663, 1502
BfmI CTRYAG 4 cut(s) 1362, 1448, 1653, 1708
BfrI CTTAAG 1 cut(s) 652
BfuAI ACCTGC 1 cut(s) 1455
BfuI GTATCC 1 cut(s) 1428
BisI GCNGC 6 cut(s) 347, 761, 1362, 1679, 1708, 1740
BlsI GCNGC 6 cut(s) 348, 762, 1363, 1680, 1709, 1741
BmcAI AGTACT 1 cut(s) 1406
Bme1390I CCNGG 2 cut(s) 866, 1683
Bme18I GGWCC 2 cut(s) 1214, 1328
BmeRI GACNNNNNGTC 1 cut(s) 199
BmeT110I CYCGRG 2 cut(s) 126, 155
BmgBI CACGTC 2 cut(s) 22, 364
BmgT120I GGNCC 6 cut(s) 54, 55, 72, 1214, 1328, 1343
BmiI GGNNCC 3 cut(s) 55, 56, 1330
BmrFI CCNGG 2 cut(s) 866, 1683
BmrI ACTGGG 1 cut(s) 1340
BmsI GCATC 4 cut(s) 1153, 1453, 1487, 1540
BmuI ACTGGG 1 cut(s) 1340
BpmI CTGGAG 3 cut(s) 275, 887, 1230
Bpu14I TTCGAA 1 cut(s) 575
BpuEI CTTGAG 1 cut(s) 1714
BsaHI GRCGYC 1 cut(s) 102
BsaJI CCNNGG 3 cut(s) 42, 127, 216
BsaXI ACNNNNNCTCC 4 cut(s) 672, 702, 1203, 1233
Bsc4I CCNNNNNNNGG 1 cut(s) 1187
Bse118I RCCGGY 1 cut(s) 1104
Bse1I ACTGG 4 cut(s) 1005, 1258, 1299, 1346
Bse3DI GCAATG 1 cut(s) 823
BseBI CCWGG 2 cut(s) 866, 1683
BseDI CCNNGG 3 cut(s) 42, 127, 216
BseGI GGATG 1 cut(s) 1435
BseLI CCNNNNNNNGG 1 cut(s) 1187
BseMI GCAATG 1 cut(s) 823
BseMII CTCAG 1 cut(s) 743
BseNI ACTGG 4 cut(s) 1005, 1258, 1299, 1346
BseSI GKGCMC 2 cut(s) 58, 1306
BseXI GCAGC 6 cut(s) 358, 772, 1348, 1665, 1694, 1751
BsgI GTGCAG 3 cut(s) 365, 1655, 1758
BshFI GGCC 5 cut(s) 41, 56, 73, 1104, 1344
BsiHKAI GWGCWC 1 cut(s) 114
BsiHKCI CYCGRG 2 cut(s) 126, 155
BsiSI CCGG 1 cut(s) 1105
BslI CCNNNNNNNGG 1 cut(s) 1187
BsmAI GTCTC 3 cut(s) 78, 1596, 1707
BsmBI CGTCTC 1 cut(s) 78
BsnI GGCC 5 cut(s) 41, 56, 73, 1104, 1344
BsoBI CYCGRG 2 cut(s) 126, 155
Bsp119I TTCGAA 1 cut(s) 575
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 3 cut(s) 58, 114, 1306
Bsp1407I TGTACA 1 cut(s) 1609
Bsp143I GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
Bsp19I CCATGG 1 cut(s) 216
BspACI CCGC 2 cut(s) 121, 1523
BspANI GGCC 5 cut(s) 41, 56, 73, 1104, 1344
BspCNI CTCAG 1 cut(s) 744
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 3 cut(s) 55, 56, 1330
BspMAI CTGCAG 4 cut(s) 1366, 1452, 1657, 1712
BspMI ACCTGC 1 cut(s) 1455
BspPI GGATC 5 cut(s) 206, 429, 638, 966, 1088
BspQI GCTCTTC 1 cut(s) 1668
BspT104I TTCGAA 1 cut(s) 575
BspTI CTTAAG 1 cut(s) 652
BsrBI CCGCTC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 823
BsrFI RCCGGY 1 cut(s) 1104
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 4 cut(s) 1005, 1258, 1299, 1346
BssAI RCCGGY 1 cut(s) 1104
BssECI CCNNGG 3 cut(s) 42, 127, 216
BssMI GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 1 cut(s) 216
Bst2UI CCWGG 2 cut(s) 866, 1683
Bst4CI ACNGT 7 cut(s) 322, 550, 981, 1176, 1229, 1689, 1732
Bst6I CTCTTC 3 cut(s) 572, 635, 1668
BstACI GRCGYC 1 cut(s) 102
BstAFI CTTAAG 1 cut(s) 652
BstAPI GCANNNNNTGC 1 cut(s) 1370
BstAUI TGTACA 1 cut(s) 1609
BstBI TTCGAA 1 cut(s) 575
BstC8I GCNNGC 4 cut(s) 35, 39, 1125, 1375
BstDEI CTNAG 1 cut(s) 752
BstDSI CCRYGG 2 cut(s) 42, 216
BstF5I GGATG 1 cut(s) 1435
BstHHI GCGC 2 cut(s) 1647, 1707
BstKTI GATC 8 cut(s) 190, 214, 424, 646, 961, 1096, 1422, 1486
BstMAI GTCTC 3 cut(s) 78, 1596, 1707
BstMBI GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
BstMWI GCNNNNNNNGC 2 cut(s) 1370, 1642
BstNI CCWGG 2 cut(s) 866, 1683
BstNSI RCATGY 1 cut(s) 1705
BstSCI CCNGG 2 cut(s) 864, 1681
BstSFI CTRYAG 4 cut(s) 1362, 1448, 1653, 1708
BstSLI GKGCMC 2 cut(s) 58, 1306
BstV1I GCAGC 6 cut(s) 358, 772, 1348, 1665, 1694, 1751
BstXI CCANNNNNNTGG 1 cut(s) 223
BsuI GTATCC 1 cut(s) 1428
BsuRI GGCC 5 cut(s) 41, 56, 73, 1104, 1344
BtgI CCRYGG 2 cut(s) 42, 216
BtrI CACGTC 2 cut(s) 22, 364
BtsCI GGATG 1 cut(s) 1435
BtsIMutI CAGTG 8 cut(s) 407, 546, 861, 1012, 1225, 1306, 1353, 1728
BveI ACCTGC 1 cut(s) 1455
Cac8I GCNNGC 4 cut(s) 35, 39, 1125, 1375
CciI TCATGA 1 cut(s) 925
CfoI GCGC 2 cut(s) 1647, 1707
Cfr10I RCCGGY 1 cut(s) 1104
Cfr13I GGNCC 6 cut(s) 54, 55, 72, 1214, 1328, 1343
CseI GACGC 2 cut(s) 95, 110
Csp6I GTAC 2 cut(s) 1405, 1610
CspCI CAANNNNNGTGG 2 cut(s) 1321, 1356
CviQI GTAC 2 cut(s) 1405, 1610
DdeI CTNAG 1 cut(s) 752
DpnI GATC 8 cut(s) 189, 213, 423, 645, 960, 1095, 1421, 1485
DpnII GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
DraI TTTAAA 1 cut(s) 726
DriI GACNNNNNGTC 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 1102
Eam1104I CTCTTC 3 cut(s) 572, 635, 1668
Eam1105I GACNNNNNGTC 1 cut(s) 199
EarI CTCTTC 3 cut(s) 572, 635, 1668
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 216
Eco24I GRGCYC 2 cut(s) 58, 114
Eco47I GGWCC 2 cut(s) 1214, 1328
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 3 cut(s) 294, 431, 579
Eco88I CYCGRG 2 cut(s) 126, 155
EcoICRI GAGCTC 1 cut(s) 112
EcoO109I RGGNCCY 3 cut(s) 54, 1214, 1328
EcoRI GAATTC 1 cut(s) 1111
EcoRII CCWGG 2 cut(s) 864, 1681
EcoT14I CCWWGG 1 cut(s) 216
EcoT38I GRGCYC 2 cut(s) 58, 114
ErhI CCWWGG 1 cut(s) 216
Esp3I CGTCTC 1 cut(s) 78
FalI AAGNNNNNCTT 4 cut(s) 417, 449, 631, 663
FbaI TGATCA 1 cut(s) 1419
Fnu4HI GCNGC 6 cut(s) 347, 761, 1362, 1679, 1708, 1740
FokI GGATG 1 cut(s) 1442
FriOI GRGCYC 2 cut(s) 58, 114
Fsp4HI GCNGC 6 cut(s) 347, 761, 1362, 1679, 1708, 1740
FspBI CTAG 3 cut(s) 263, 663, 1502
GlaI GCGC 2 cut(s) 1646, 1706
GluI GCNGC 6 cut(s) 347, 761, 1362, 1679, 1708, 1740
GsuI CTGGAG 3 cut(s) 275, 887, 1230
HaeIII GGCC 5 cut(s) 41, 56, 73, 1104, 1344
HapII CCGG 1 cut(s) 1105
HgaI GACGC 2 cut(s) 95, 110
HhaI GCGC 2 cut(s) 1647, 1707
Hin1I GRCGYC 1 cut(s) 102
Hin6I GCGC 2 cut(s) 1645, 1705
HinP1I GCGC 2 cut(s) 1645, 1705
HincII GTYRAC 1 cut(s) 1039
HindII GTYRAC 1 cut(s) 1039
HinfI GANTC 5 cut(s) 92, 295, 496, 1076, 1543
HpaII CCGG 1 cut(s) 1105
HphI GGTGA 2 cut(s) 907, 1483
Hpy166II GTNNAC 1 cut(s) 1039
Hpy188I TCNGA 4 cut(s) 19, 460, 530, 1483
Hpy8I GTNNAC 1 cut(s) 1039
Hpy99I CGWCG 2 cut(s) 23, 104
HpyAV CCTTC 3 cut(s) 434, 1194, 1262
HpyCH4III ACNGT 7 cut(s) 322, 550, 981, 1176, 1229, 1689, 1732
HpyCH4IV ACGT 4 cut(s) 21, 200, 363, 1334
HpyF10VI GCNNNNNNNGC 2 cut(s) 1370, 1642
HpyF3I CTNAG 1 cut(s) 752
HpySE526I ACGT 4 cut(s) 21, 200, 363, 1334
Hsp92I GRCGYC 1 cut(s) 102
HspAI GCGC 2 cut(s) 1645, 1705
Ksp22I TGATCA 1 cut(s) 1419
Kzo9I GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
LguI GCTCTTC 1 cut(s) 1668
LmnI GCTCC 2 cut(s) 128, 1759
Lsp1109I GCAGC 6 cut(s) 358, 772, 1348, 1665, 1694, 1751
LweI GCATC 4 cut(s) 1153, 1453, 1487, 1540
MaeI CTAG 3 cut(s) 263, 663, 1502
MaeII ACGT 4 cut(s) 21, 200, 363, 1334
MaeIII GTNAC 3 cut(s) 191, 466, 1697
MalI GATC 8 cut(s) 189, 213, 423, 645, 960, 1095, 1421, 1485
MbiI CCGCTC 1 cut(s) 123
MboI GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
MboII GAAGA 7 cut(s) 247, 572, 589, 622, 906, 1478, 1685
MfeI CAATTG 1 cut(s) 611
MhlI GDGCHC 3 cut(s) 58, 114, 1306
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 3 cut(s) 42, 396, 1489
MroXI GAANNNNTTC 1 cut(s) 1272
MseI TTAA 7 cut(s) 117, 488, 653, 725, 1020, 1233, 1353
MslI CAYNNNNRTG 3 cut(s) 221, 366, 924
MspA1I CMGCKG 1 cut(s) 1208
MspCI CTTAAG 1 cut(s) 652
MspI CCGG 1 cut(s) 1105
MspR9I CCNGG 2 cut(s) 866, 1683
MunI CAATTG 1 cut(s) 611
MvaI CCWGG 2 cut(s) 866, 1683
MwoI GCNNNNNNNGC 2 cut(s) 1370, 1642
NcoI CCATGG 1 cut(s) 216
NdeII GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
NlaIV GGNNCC 3 cut(s) 55, 56, 1330
NmuCI GTSAC 2 cut(s) 191, 466
NspI RCATGY 1 cut(s) 1705
NspV TTCGAA 1 cut(s) 575
PaeR7I CTCGAG 1 cut(s) 155
PagI TCATGA 1 cut(s) 925
PciSI GCTCTTC 1 cut(s) 1668
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 4 cut(s) 295, 496, 1076, 1543
PkrI GCNGC 6 cut(s) 348, 762, 1363, 1680, 1709, 1741
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
PpuMI RGGWCCY 2 cut(s) 1214, 1328
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 2 cut(s) 1214, 1328
Psp6I CCWGG 2 cut(s) 864, 1681
PspGI CCWGG 2 cut(s) 864, 1681
PspN4I GGNNCC 3 cut(s) 55, 56, 1330
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 6 cut(s) 54, 55, 72, 1214, 1328, 1343
PspPPI RGGWCCY 2 cut(s) 1214, 1328
PspXI VCTCGAGB 1 cut(s) 155
PsrI GAACNNNNNNTAC 2 cut(s) 1602, 1634
PstI CTGCAG 4 cut(s) 1366, 1452, 1657, 1712
PvuII CAGCTG 1 cut(s) 1208
RsaI GTAC 2 cut(s) 1406, 1611
RsaNI GTAC 2 cut(s) 1405, 1610
RseI CAYNNNNRTG 3 cut(s) 221, 366, 924
SacI GAGCTC 1 cut(s) 114
SapI GCTCTTC 1 cut(s) 1668
SaqAI TTAA 7 cut(s) 117, 488, 653, 725, 1020, 1233, 1353
SatI GCNGC 6 cut(s) 347, 761, 1362, 1679, 1708, 1740
Sau3AI GATC 8 cut(s) 187, 211, 421, 643, 958, 1093, 1419, 1483
Sau96I GGNCC 6 cut(s) 54, 55, 72, 1214, 1328, 1343
SbfI CCTGCAGG 1 cut(s) 1452
ScaI AGTACT 1 cut(s) 1406
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 2 cut(s) 866, 1683
SdaI CCTGCAGG 1 cut(s) 1452
SduI GDGCHC 3 cut(s) 58, 114, 1306
SfaNI GCATC 4 cut(s) 1153, 1453, 1487, 1540
SfcI CTRYAG 4 cut(s) 1362, 1448, 1653, 1708
Sfr274I CTCGAG 1 cut(s) 155
SfuI TTCGAA 1 cut(s) 575
SinI GGWCC 2 cut(s) 1214, 1328
SlaI CTCGAG 1 cut(s) 155
SmiI ATTTAAAT 1 cut(s) 726
SmiMI CAYNNNNRTG 3 cut(s) 221, 366, 924
SmlI CTYRAG 3 cut(s) 155, 652, 1693
SmoI CTYRAG 3 cut(s) 155, 652, 1693
Sse8387I CCTGCAGG 1 cut(s) 1452
SsiI CCGC 2 cut(s) 121, 1523
SspMI CTAG 3 cut(s) 263, 663, 1502
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 864, 1681
StyI CCWWGG 1 cut(s) 216
SwaI ATTTAAAT 1 cut(s) 726
TaaI ACNGT 7 cut(s) 322, 550, 981, 1176, 1229, 1689, 1732
TaiI ACGT 4 cut(s) 24, 203, 366, 1337
TaqI TCGA 7 cut(s) 156, 375, 575, 795, 993, 1548, 1671
TaqII GACCGA 1 cut(s) 719
TatI WGTACW 2 cut(s) 1404, 1609
TfiI GAWTC 4 cut(s) 295, 496, 1076, 1543
Tru1I TTAA 7 cut(s) 117, 488, 653, 725, 1020, 1233, 1353
Tru9I TTAA 7 cut(s) 117, 488, 653, 725, 1020, 1233, 1353
TscAI CASTG 8 cut(s) 414, 553, 861, 1012, 1232, 1306, 1353, 1735
TseFI GTSAC 2 cut(s) 191, 466
TseI GCWGC 6 cut(s) 346, 760, 1361, 1678, 1707, 1739
Tsp45I GTSAC 2 cut(s) 191, 466
TspDTI ATGAA 4 cut(s) 315, 942, 1015, 1640
TspGWI ACGGA 5 cut(s) 590, 1086, 1257, 1442, 1724
TspRI CASTG 8 cut(s) 414, 553, 861, 1012, 1232, 1306, 1353, 1735
Vha464I CTTAAG 1 cut(s) 652
VpaK11BI GGWCC 2 cut(s) 1214, 1328
XapI RAATTY 5 cut(s) 428, 532, 596, 898, 1111
XbaI TCTAGA 1 cut(s) 662
XceI RCATGY 1 cut(s) 1705
XhoI CTCGAG 1 cut(s) 155
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 3 cut(s) 263, 663, 1502
ZrmI AGTACT 1 cut(s) 1406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.