Rroxscaffold_2G00114860

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000862
Physical Location & Seq
Reverse (-)
40954830 .. 40956590
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00114860.1

Sequence Viewer

Length: 1698 bp
ATGGGAGGGTGCTTTTCGGACGTCAGAGGAGGGAAGCAGGCAGTAGGGGGAGCGCAACAAAGGCCAATTAACTACTATGAGGATTCCAACGACGCCGTCGACTGCTTTAACAAGTCTCAGGGAGCTGTCCCACTATTCACTCCACTCGAGCTATCCTTCTCCGCCTCTAACTTACTTGATTGTGATTTCACTTCGAAGAGTGATCCCATGGTTGTCGTGTATGCAAACAAAGGATATGGCGATCACGAGGAATTAGGGAGAACTGAAGTAGTACTGAATAATCTGAATCCCTCTTGGATAGAGAAAGTTAGAGTTGCATATCATTTCGAGTTTGTACAGCCGTTGCTATTCCGTGTGTATGATGTCGACACAAAATATCACAATGTAAATGTGAAGACACTGGATTTGAAGAATCAAGAATTTCTAGGGGAAGGCACTTGTGCTCTATCGGAGATAGTGACTAAACAAAGTCGAAGTCTTACCCTAAATCTCAATGATGACTGTGGACGTCTTGGAGACCGGAGGAACTTAGGAACACTCACTGTACATGCTGAGGAATTTAGTGCTTCTAAGAGTGTTGTTGAGATAAAATTTCGTTGTTCCCGCTTGGAAAACAAAGACCTGTTTTCTAAAAGCGATCCTTTCTTAAGAATATCGAGGATGGTTGAGACCGGTGGTTGTGTTCCAATTTGCAAGACAGAAGTGGTGGACAACAATTTAAATCCAACTTGGAAATCATTGTGCCTGAGTATGCAGCAGATTGGAAGCAAGGATAATCCCTTATCGGTGGCAGACCTCGAGAAACTCTACAAAGAGAAAAGCTGCGTCAACTTTGTCATTCCGCCATCTTCTCGTCATGGTCATGAAAAGCTCTCCAAGGGTCTGCTTTTTGTGGATCATTTTTTAGAGAAGGAACAACCAAGCTTTATTGATTACATATCTAGTGGTTTTGAGCTCAACTTTATGGTTGCCGTTGATTTTACAGCTTCAAATCGAGATCCTAGCCGAACCGATTCTTTGCACTATATTGATCCTTCTGGCCGGTTGAATTCTTACCAGCAGGCAATAATGCAAGTAGGGGAAGTCATTCAATTTTACGACACTGATAAACGCTTTCCTGCTTGGGGATTTGGAGCACAGATATATGGTGGTGCCGTATCCCATTGTTTCAACATGGATGAAACCCCAACTGGCTTTGAGGTTCAAGGAGTTGAGGGCATCATGTCTGCTTATTCCAGTGCTCTACGCAAGGTTTCTCTATGTGGACCGACTTTGTTTGGCAAAGTGGTTAACAGGGCTGCAGAAATGGCTTCGCAATCCCTCTCGGAACACAACAAGAAGTACTTTGTGTTACTTATTATTACAGACGGTATCCTTTCGGACCTTCAAGAAACAATAGATGCTTTGGTTAGGGCATCTGATCTTCCCCTCTCCATTATGATAGTTGGAGTCGGAAATGCAGATTTCAAACAAATGGAGATCCTTGATGCTGACAATGGACATCCATTGCGGAGTTCGACAGGTTGTTTAGCTGCAAGAGACATTGTTCAGTTTGTTCCCATGAGGGAAATGAATAATCAGCGGATTTCTGTTGTTCAATCGCTTCTGGAGGAGCTGCCTGGACAGTTTTTGAGTTACATGCGGAACAAGGGCATCAAGCCACTCTCACCTTTCCATTCCAATCCCCATGCCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

565

Amino Acids

62.93

Weight (kDa)

5.55

Isoelectric Point (pI)

35.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 54 - 160 9.3e-13 C2 domain
C2 PF00168 199 - 261 3e-06 C2 domain
Copine PF07002 339 - 554 3.1e-78 Copine
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 24, 511
AccB1I GGYRCC 1 cut(s) 1151
AccI GTMKAC 2 cut(s) 99, 366
AciI CCGC 6 cut(s) 162, 604, 842, 1510, 1582, 1642
AclWI GGATC 6 cut(s) 197, 632, 903, 992, 1025, 1474
AcoI YGGCCR 1 cut(s) 1039
AcsI RAATTY 4 cut(s) 419, 557, 590, 1048
AcuI CTGAAG 1 cut(s) 285
AcyI GRCGYC 3 cut(s) 21, 93, 508
AfaI GTAC 4 cut(s) 273, 336, 546, 1343
AfiI CCNNNNNNNGG 1 cut(s) 1124
AflII CTTAAG 1 cut(s) 646
AgeI ACCGGT 1 cut(s) 671
AgsI TTSAA 9 cut(s) 409, 990, 1048, 1091, 1171, 1205, 1388, 1468, 1598
AjnI CCWGG 1 cut(s) 1618
AluBI AGCT 9 cut(s) 125, 151, 822, 871, 924, 955, 986, 1532, 1615
AluI AGCT 9 cut(s) 125, 151, 822, 871, 924, 955, 986, 1532, 1615
Alw21I GWGCWC 4 cut(s) 445, 957, 1138, 1243
Alw26I GTCTC 4 cut(s) 120, 510, 662, 1533
AlwI GGATC 6 cut(s) 197, 632, 903, 992, 1025, 1474
Ama87I CYCGRG 2 cut(s) 146, 797
AoxI GGCC 2 cut(s) 62, 1039
ApeKI GCWGC 5 cut(s) 754, 822, 1298, 1532, 1615
ApoI RAATTY 4 cut(s) 419, 557, 590, 1048
ArsI GACNNNNNNTTYG 4 cut(s) 388, 420, 460, 492
AsiGI ACCGGT 1 cut(s) 671
Asp700I GAANNNNTTC 2 cut(s) 1012, 1086
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 2 cut(s) 1265, 1381
AsuHPI GGTGA 1 cut(s) 1659
AsuII TTCGAA 1 cut(s) 194
AvaI CYCGRG 2 cut(s) 146, 797
AvaII GGWCC 2 cut(s) 1265, 1381
BanI GGYRCC 1 cut(s) 1151
BanII GRGCYC 1 cut(s) 957
BauI CACGAG 1 cut(s) 245
BbsI GAAGAC 1 cut(s) 401
Bbv12I GWGCWC 4 cut(s) 445, 957, 1138, 1243
BbvCI CCTCAGC 1 cut(s) 552
BbvI GCAGC 5 cut(s) 766, 809, 1285, 1519, 1602
BccI CCATC 2 cut(s) 655, 853
BceAI ACGGC 4 cut(s) 80, 325, 956, 1139
BciT130I CCWGG 1 cut(s) 1620
BciVI GTATCC 2 cut(s) 1168, 1382
BcoDI GTCTC 4 cut(s) 120, 510, 662, 1533
BfaI CTAG 4 cut(s) 425, 942, 1002, 1696
BfmI CTRYAG 1 cut(s) 1299
BfrI CTTAAG 1 cut(s) 646
BfuI GTATCC 2 cut(s) 1168, 1382
BisI GCNGC 5 cut(s) 755, 823, 1299, 1533, 1616
BlsI GCNGC 5 cut(s) 756, 824, 1300, 1534, 1617
BmcAI AGTACT 2 cut(s) 273, 1343
Bme1390I CCNGG 1 cut(s) 1620
Bme18I GGWCC 2 cut(s) 1265, 1381
BmeT110I CYCGRG 2 cut(s) 146, 797
BmgT120I GGNCC 2 cut(s) 1265, 1381
BmiI GGNNCC 1 cut(s) 1153
BmrFI CCNGG 1 cut(s) 1620
BmsI GCATC 5 cut(s) 1227, 1390, 1424, 1477, 1662
BpiI GAAGAC 1 cut(s) 401
BpmI CTGGAG 1 cut(s) 1628
Bpu10I CCTNAGC 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 194
BsaHI GRCGYC 3 cut(s) 21, 93, 508
BsaI GGTCTC 2 cut(s) 510, 662
BsaJI CCNNGG 2 cut(s) 207, 876
BsaWI WCCGGW 2 cut(s) 519, 671
Bsc4I CCNNNNNNNGG 1 cut(s) 1124
Bse118I RCCGGY 2 cut(s) 671, 1041
Bse1I ACTGG 3 cut(s) 405, 1195, 1236
Bse3DI GCAATG 1 cut(s) 1505
BseBI CCWGG 1 cut(s) 1620
BseDI CCNNGG 2 cut(s) 207, 876
BseGI GGATG 3 cut(s) 666, 1183, 1501
BseLI CCNNNNNNNGG 1 cut(s) 1124
BseMI GCAATG 1 cut(s) 1505
BseMII CTCAG 3 cut(s) 131, 543, 737
BseNI ACTGG 3 cut(s) 405, 1195, 1236
BseRI GAGGAG 2 cut(s) 42, 1625
BseXI GCAGC 5 cut(s) 766, 809, 1285, 1519, 1602
BshFI GGCC 2 cut(s) 64, 1041
BshNI GGYRCC 1 cut(s) 1151
BshTI ACCGGT 1 cut(s) 671
BsiHKAI GWGCWC 4 cut(s) 445, 957, 1138, 1243
BsiHKCI CYCGRG 2 cut(s) 146, 797
BsiSI CCGG 3 cut(s) 520, 672, 1042
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 1124
BsmAI GTCTC 4 cut(s) 120, 510, 662, 1533
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 2 cut(s) 64, 1041
Bso31I GGTCTC 2 cut(s) 510, 662
BsoBI CYCGRG 2 cut(s) 146, 797
Bsp119I TTCGAA 1 cut(s) 194
Bsp1286I GDGCHC 4 cut(s) 445, 957, 1138, 1243
Bsp1407I TGTACA 2 cut(s) 334, 544
Bsp143I GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
Bsp19I CCATGG 1 cut(s) 207
BspACI CCGC 6 cut(s) 162, 604, 842, 1510, 1582, 1642
BspANI GGCC 2 cut(s) 64, 1041
BspCNI CTCAG 3 cut(s) 130, 544, 738
BspHI TCATGA 1 cut(s) 862
BspLI GGNNCC 1 cut(s) 1153
BspMAI CTGCAG 1 cut(s) 1303
BspPI GGATC 6 cut(s) 197, 632, 903, 992, 1025, 1474
BspT104I TTCGAA 1 cut(s) 194
BspT107I GGYRCC 1 cut(s) 1151
BspTI CTTAAG 1 cut(s) 646
BspTNI GGTCTC 2 cut(s) 510, 662
BsrDI GCAATG 1 cut(s) 1505
BsrFI RCCGGY 2 cut(s) 671, 1041
BsrGI TGTACA 2 cut(s) 334, 544
BsrI ACTGG 3 cut(s) 405, 1195, 1236
BssAI RCCGGY 2 cut(s) 671, 1041
BssECI CCNNGG 2 cut(s) 207, 876
BssMI GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
BssNI GRCGYC 3 cut(s) 21, 93, 508
BssSI CACGAG 1 cut(s) 245
BssT1I CCWWGG 2 cut(s) 207, 876
Bst2BI CACGAG 1 cut(s) 245
Bst2UI CCWGG 1 cut(s) 1620
Bst4CI ACNGT 4 cut(s) 503, 544, 1370, 1626
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 3 cut(s) 21, 93, 508
BstAFI CTTAAG 1 cut(s) 646
BstAUI TGTACA 2 cut(s) 334, 544
BstBI TTCGAA 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 39, 1062
BstDEI CTNAG 5 cut(s) 117, 529, 552, 570, 746
BstDSI CCRYGG 1 cut(s) 207
BstF5I GGATG 3 cut(s) 666, 1183, 1501
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 8 cut(s) 205, 244, 640, 898, 1000, 1033, 1423, 1482
BstMAI GTCTC 4 cut(s) 120, 510, 662, 1533
BstMBI GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
BstMWI GCNNNNNNNGC 2 cut(s) 61, 1307
BstNI CCWGG 1 cut(s) 1620
BstNSI RCATGY 2 cut(s) 551, 1642
BstSCI CCNGG 1 cut(s) 1618
BstSFI CTRYAG 1 cut(s) 1299
BstV1I GCAGC 5 cut(s) 766, 809, 1285, 1519, 1602
BstV2I GAAGAC 1 cut(s) 401
BstX2I RGATCY 2 cut(s) 997, 1479
BstYI RGATCY 2 cut(s) 997, 1479
BsuI GTATCC 2 cut(s) 1168, 1382
BsuRI GGCC 2 cut(s) 64, 1041
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 3 cut(s) 666, 1183, 1501
BtsIMutI CAGTG 4 cut(s) 398, 540, 1101, 1243
Cac8I GCNNGC 2 cut(s) 39, 1062
CciI TCATGA 1 cut(s) 862
CfoI GCGC 1 cut(s) 55
Cfr10I RCCGGY 2 cut(s) 671, 1041
Cfr13I GGNCC 2 cut(s) 1265, 1381
CseI GACGC 2 cut(s) 101, 814
Csp6I GTAC 4 cut(s) 272, 335, 545, 1342
CspAI ACCGGT 1 cut(s) 671
CviAII CATG 9 cut(s) 208, 548, 857, 863, 1174, 1222, 1561, 1639, 1688
CviQI GTAC 4 cut(s) 272, 335, 545, 1342
DdeI CTNAG 5 cut(s) 117, 529, 552, 570, 746
DpnI GATC 8 cut(s) 204, 243, 639, 897, 999, 1032, 1422, 1481
DpnII GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
DraI TTTAAA 1 cut(s) 720
EaeI YGGCCR 1 cut(s) 1039
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 2 cut(s) 151, 831
Ecl136II GAGCTC 1 cut(s) 955
Eco130I CCWWGG 2 cut(s) 207, 876
Eco24I GRGCYC 1 cut(s) 957
Eco31I GGTCTC 2 cut(s) 510, 662
Eco47I GGWCC 2 cut(s) 1265, 1381
Eco53kI GAGCTC 1 cut(s) 955
Eco57I CTGAAG 1 cut(s) 285
Eco88I CYCGRG 2 cut(s) 146, 797
EcoICRI GAGCTC 1 cut(s) 955
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 1 cut(s) 1618
EcoT14I CCWWGG 2 cut(s) 207, 876
EcoT38I GRGCYC 1 cut(s) 957
ErhI CCWWGG 2 cut(s) 207, 876
FaeI CATG 9 cut(s) 211, 551, 860, 866, 1177, 1225, 1564, 1642, 1691
FalI AAGNNNNNCTT 4 cut(s) 625, 657, 1328, 1360
FaqI GGGAC 1 cut(s) 113
FatI CATG 9 cut(s) 207, 547, 856, 862, 1173, 1221, 1560, 1638, 1687
FauI CCCGC 1 cut(s) 611
FblI GTMKAC 2 cut(s) 99, 366
Fnu4HI GCNGC 5 cut(s) 755, 823, 1299, 1533, 1616
FokI GGATG 3 cut(s) 673, 1190, 1488
FriOI GRGCYC 1 cut(s) 957
Fsp4HI GCNGC 5 cut(s) 755, 823, 1299, 1533, 1616
FspBI CTAG 4 cut(s) 425, 942, 1002, 1696
GlaI GCGC 1 cut(s) 54
GluI GCNGC 5 cut(s) 755, 823, 1299, 1533, 1616
GsuI CTGGAG 1 cut(s) 1628
HaeIII GGCC 2 cut(s) 64, 1041
HapII CCGG 3 cut(s) 520, 672, 1042
HgaI GACGC 2 cut(s) 101, 814
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 3 cut(s) 21, 93, 508
Hin1II CATG 9 cut(s) 211, 551, 860, 866, 1177, 1225, 1564, 1642, 1691
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HincII GTYRAC 4 cut(s) 100, 367, 829, 1291
HindII GTYRAC 4 cut(s) 100, 367, 829, 1291
HindIII AAGCTT 1 cut(s) 922
HinfI GANTC 5 cut(s) 83, 286, 412, 1013, 1449
HpaI GTTAAC 1 cut(s) 1291
HpaII CCGG 3 cut(s) 520, 672, 1042
HphI GGTGA 1 cut(s) 1659
Hpy166II GTNNAC 7 cut(s) 100, 367, 506, 709, 829, 1265, 1291
Hpy188I TCNGA 8 cut(s) 19, 26, 285, 451, 1327, 1381, 1420, 1454
Hpy188III TCNNGA 7 cut(s) 245, 416, 799, 863, 995, 1388, 1607
Hpy8I GTNNAC 7 cut(s) 100, 367, 506, 709, 829, 1265, 1291
Hpy99I CGWCG 2 cut(s) 95, 101
HpyAV CCTTC 5 cut(s) 166, 425, 904, 1044, 1394
HpyCH4III ACNGT 4 cut(s) 503, 544, 1370, 1626
HpyCH4IV ACGT 2 cut(s) 21, 508
HpyCH4V TGCA 9 cut(s) 224, 317, 693, 754, 1021, 1072, 1301, 1460, 1535
HpyF10VI GCNNNNNNNGC 2 cut(s) 61, 1307
HpyF3I CTNAG 5 cut(s) 117, 529, 552, 570, 746
HpySE526I ACGT 2 cut(s) 21, 508
Hsp92I GRCGYC 3 cut(s) 21, 93, 508
Hsp92II CATG 9 cut(s) 211, 551, 860, 866, 1177, 1225, 1564, 1642, 1691
HspAI GCGC 1 cut(s) 53
KspAI GTTAAC 1 cut(s) 1291
Kzo9I GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
LmnI GCTCC 4 cut(s) 50, 122, 1133, 1612
Lsp1109I GCAGC 5 cut(s) 766, 809, 1285, 1519, 1602
LweI GCATC 5 cut(s) 1227, 1390, 1424, 1477, 1662
MaeI CTAG 4 cut(s) 425, 942, 1002, 1696
MaeII ACGT 2 cut(s) 21, 508
MaeIII GTNAC 3 cut(s) 457, 1350, 1634
MalI GATC 8 cut(s) 204, 243, 639, 897, 999, 1032, 1422, 1481
MboI GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
MboII GAAGA 5 cut(s) 208, 406, 421, 840, 1415
MflI RGATCY 2 cut(s) 997, 1479
MhlI GDGCHC 4 cut(s) 445, 957, 1138, 1243
MluCI AATT 9 cut(s) 66, 251, 419, 557, 590, 687, 715, 1048, 1091
MlyI GAGTC 1 cut(s) 1458
MmeI TCCRAC 4 cut(s) 111, 749, 1426, 1432
MroXI GAANNNNTTC 2 cut(s) 1012, 1086
MseI TTAA 5 cut(s) 69, 108, 647, 719, 1290
MslI CAYNNNNRTG 1 cut(s) 861
MspA1I CMGCKG 1 cut(s) 1582
MspCI CTTAAG 1 cut(s) 646
MspI CCGG 3 cut(s) 520, 672, 1042
MspR9I CCNGG 1 cut(s) 1620
MvaI CCWGG 1 cut(s) 1620
MwoI GCNNNNNNNGC 2 cut(s) 61, 1307
NcoI CCATGG 1 cut(s) 207
NdeII GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
NlaIII CATG 9 cut(s) 211, 551, 860, 866, 1177, 1225, 1564, 1642, 1691
NlaIV GGNNCC 1 cut(s) 1153
NmuCI GTSAC 1 cut(s) 457
NspI RCATGY 2 cut(s) 551, 1642
NspV TTCGAA 1 cut(s) 194
PaeR7I CTCGAG 2 cut(s) 146, 797
PagI TCATGA 1 cut(s) 862
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PdmI GAANNNNTTC 2 cut(s) 1012, 1086
PfeI GAWTC 4 cut(s) 83, 286, 412, 1013
PflFI GACNNNGTC 1 cut(s) 95
PinAI ACCGGT 1 cut(s) 671
PkrI GCNGC 5 cut(s) 756, 824, 1300, 1534, 1617
PleI GAGTC 1 cut(s) 1457
PpsI GAGTC 1 cut(s) 1457
Psp124BI GAGCTC 1 cut(s) 957
Psp6I CCWGG 1 cut(s) 1618
PspGI CCWGG 1 cut(s) 1618
PspN4I GGNNCC 1 cut(s) 1153
PspPI GGNCC 2 cut(s) 1265, 1381
PspXI VCTCGAGB 1 cut(s) 146
PstI CTGCAG 1 cut(s) 1303
PsuI RGATCY 2 cut(s) 997, 1479
PsyI GACNNNGTC 1 cut(s) 95
RsaI GTAC 4 cut(s) 273, 336, 546, 1343
RsaNI GTAC 4 cut(s) 272, 335, 545, 1342
RseI CAYNNNNRTG 1 cut(s) 861
SacI GAGCTC 1 cut(s) 957
SalI GTCGAC 2 cut(s) 98, 365
SaqAI TTAA 5 cut(s) 69, 108, 647, 719, 1290
SatI GCNGC 5 cut(s) 755, 823, 1299, 1533, 1616
Sau3AI GATC 8 cut(s) 202, 241, 637, 895, 997, 1030, 1420, 1479
Sau96I GGNCC 2 cut(s) 1265, 1381
ScaI AGTACT 2 cut(s) 273, 1343
SchI GAGTC 1 cut(s) 1458
ScrFI CCNGG 1 cut(s) 1620
SduI GDGCHC 4 cut(s) 445, 957, 1138, 1243
SfaNI GCATC 5 cut(s) 1227, 1390, 1424, 1477, 1662
SfcI CTRYAG 1 cut(s) 1299
Sfr274I CTCGAG 2 cut(s) 146, 797
SfuI TTCGAA 1 cut(s) 194
SinI GGWCC 2 cut(s) 1265, 1381
SlaI CTCGAG 2 cut(s) 146, 797
SmiI ATTTAAAT 1 cut(s) 720
SmiMI CAYNNNNRTG 1 cut(s) 861
SmlI CTYRAG 3 cut(s) 146, 646, 797
SmoI CTYRAG 3 cut(s) 146, 646, 797
Sse9I AATT 9 cut(s) 66, 251, 419, 557, 590, 687, 715, 1048, 1091
SsiI CCGC 6 cut(s) 162, 604, 842, 1510, 1582, 1642
SspMI CTAG 4 cut(s) 425, 942, 1002, 1696
SstI GAGCTC 1 cut(s) 957
StyD4I CCNGG 1 cut(s) 1618
StyI CCWWGG 2 cut(s) 207, 876
SwaI ATTTAAAT 1 cut(s) 720
TaaI ACNGT 4 cut(s) 503, 544, 1370, 1626
TaiI ACGT 2 cut(s) 24, 511
TaqII GACCGA 1 cut(s) 1282
TasI AATT 9 cut(s) 66, 251, 419, 557, 590, 687, 715, 1048, 1091
TatI WGTACW 4 cut(s) 271, 334, 544, 1341
TfiI GAWTC 4 cut(s) 83, 286, 412, 1013
Tru1I TTAA 5 cut(s) 69, 108, 647, 719, 1290
Tru9I TTAA 5 cut(s) 69, 108, 647, 719, 1290
TscAI CASTG 4 cut(s) 405, 547, 1108, 1243
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 5 cut(s) 754, 822, 1298, 1532, 1615
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 879, 1194, 1586
TspGWI ACGGA 1 cut(s) 341
TspRI CASTG 4 cut(s) 405, 547, 1108, 1243
Tth111I GACNNNGTC 1 cut(s) 95
Vha464I CTTAAG 1 cut(s) 646
VpaK11BI GGWCC 2 cut(s) 1265, 1381
XapI RAATTY 4 cut(s) 419, 557, 590, 1048
XceI RCATGY 2 cut(s) 551, 1642
XhoI CTCGAG 2 cut(s) 146, 797
XmiI GTMKAC 2 cut(s) 99, 366
XmnI GAANNNNTTC 2 cut(s) 1012, 1086
XspI CTAG 4 cut(s) 425, 942, 1002, 1696
ZraI GACGTC 2 cut(s) 22, 509
ZrmI AGTACT 2 cut(s) 273, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.